Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76444.t1 | XP_003629389.1 | 98.5 | 332 | 5 | 0 | 1 | 332 | 1 | 332 | 3.80E-186 | 660.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76444.t1 | Q9FJZ9 | 76.0 | 333 | 77 | 2 | 1 | 330 | 1 | 333 | 6.9e-144 | 511.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76444.t1 | G7LDV0 | 98.5 | 332 | 5 | 0 | 1 | 332 | 1 | 332 | 2.8e-186 | 660.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene051973 | MS.gene76444 | 0.852179 | 5.47E-61 | -1.69E-46 |
MS.gene054884 | MS.gene76444 | 0.811777 | 5.91E-51 | -1.69E-46 |
MS.gene056633 | MS.gene76444 | -0.823906 | 1.08E-53 | -1.69E-46 |
MS.gene056748 | MS.gene76444 | 0.827232 | 1.75E-54 | -1.69E-46 |
MS.gene056988 | MS.gene76444 | 0.848101 | 7.59E-60 | -1.69E-46 |
MS.gene057261 | MS.gene76444 | 0.802087 | 6.63E-49 | -1.69E-46 |
MS.gene057717 | MS.gene76444 | 0.815962 | 7.06E-52 | -1.69E-46 |
MS.gene058603 | MS.gene76444 | 0.800182 | 1.62E-48 | -1.69E-46 |
MS.gene059892 | MS.gene76444 | 0.807906 | 4.02E-50 | -1.69E-46 |
MS.gene060087 | MS.gene76444 | 0.830677 | 2.57E-55 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene21483 | MS.gene76444 | PPI |
MS.gene015325 | MS.gene76444 | PPI |
MS.gene053958 | MS.gene76444 | PPI |
MS.gene76444 | MS.gene78768 | PPI |
MS.gene09669 | MS.gene76444 | PPI |
MS.gene76444 | MS.gene059685 | PPI |
MS.gene068826 | MS.gene76444 | PPI |
MS.gene76444 | MS.gene068824 | PPI |
MS.gene068822 | MS.gene76444 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76444.t1 | MTR_8g076820 | 98.494 | 332 | 5 | 0 | 1 | 332 | 1 | 332 | 0.0 | 681 |
MS.gene76444.t1 | MTR_5g021060 | 81.212 | 330 | 62 | 0 | 1 | 330 | 1 | 330 | 0.0 | 551 |
MS.gene76444.t1 | MTR_1g022970 | 62.914 | 302 | 111 | 1 | 30 | 330 | 46 | 347 | 9.14e-133 | 382 |
MS.gene76444.t1 | MTR_5g014100 | 55.031 | 318 | 129 | 5 | 23 | 330 | 18 | 331 | 2.43e-115 | 337 |
MS.gene76444.t1 | MTR_3g072190 | 56.146 | 301 | 124 | 2 | 30 | 330 | 26 | 318 | 9.62e-111 | 325 |
MS.gene76444.t1 | MTR_2g084000 | 47.576 | 330 | 162 | 2 | 1 | 330 | 1 | 319 | 5.67e-109 | 320 |
MS.gene76444.t1 | MTR_2g084080 | 48.788 | 330 | 156 | 3 | 1 | 330 | 1 | 317 | 1.01e-108 | 320 |
MS.gene76444.t1 | MTR_2g040000 | 52.564 | 312 | 142 | 2 | 24 | 331 | 23 | 332 | 1.26e-108 | 320 |
MS.gene76444.t1 | MTR_4g029170 | 51.205 | 332 | 149 | 5 | 1 | 330 | 1 | 321 | 1.97e-108 | 319 |
MS.gene76444.t1 | MTR_7g093370 | 48.936 | 329 | 162 | 3 | 4 | 330 | 47 | 371 | 2.65e-108 | 320 |
MS.gene76444.t1 | MTR_2g084020 | 48.428 | 318 | 157 | 1 | 13 | 330 | 8 | 318 | 5.51e-107 | 315 |
MS.gene76444.t1 | MTR_2g029820 | 49.836 | 305 | 152 | 1 | 28 | 331 | 27 | 331 | 8.95e-107 | 316 |
MS.gene76444.t1 | MTR_2g029830 | 50.165 | 303 | 150 | 1 | 30 | 331 | 28 | 330 | 9.05e-107 | 316 |
MS.gene76444.t1 | MTR_2g029800 | 49.835 | 303 | 151 | 1 | 30 | 331 | 29 | 331 | 1.19e-106 | 316 |
MS.gene76444.t1 | MTR_2g029560 | 48.137 | 322 | 165 | 2 | 11 | 330 | 4 | 325 | 3.85e-106 | 314 |
MS.gene76444.t1 | MTR_4g122640 | 50.164 | 305 | 148 | 2 | 27 | 330 | 35 | 336 | 5.00e-106 | 313 |
MS.gene76444.t1 | MTR_4g029180 | 54.515 | 299 | 126 | 4 | 34 | 330 | 31 | 321 | 1.08e-105 | 312 |
MS.gene76444.t1 | MTR_3g466200 | 51.316 | 304 | 137 | 4 | 30 | 330 | 25 | 320 | 1.56e-105 | 311 |
MS.gene76444.t1 | MTR_2g084010 | 50.166 | 301 | 143 | 1 | 30 | 330 | 25 | 318 | 2.10e-105 | 311 |
MS.gene76444.t1 | MTR_7g072510 | 49.363 | 314 | 150 | 3 | 18 | 330 | 7 | 312 | 2.90e-105 | 311 |
MS.gene76444.t1 | MTR_2g028980 | 48.466 | 326 | 163 | 3 | 6 | 330 | 9 | 330 | 3.74e-105 | 312 |
MS.gene76444.t1 | MTR_2g029815 | 46.526 | 331 | 171 | 2 | 2 | 331 | 6 | 331 | 3.95e-105 | 311 |
MS.gene76444.t1 | MTR_5g083860 | 52.145 | 303 | 135 | 3 | 30 | 330 | 31 | 325 | 6.60e-105 | 310 |
MS.gene76444.t1 | MTR_2g029730 | 47.812 | 320 | 165 | 2 | 13 | 330 | 7 | 326 | 9.77e-105 | 310 |
MS.gene76444.t1 | MTR_5g074860 | 48.936 | 329 | 149 | 6 | 5 | 329 | 11 | 324 | 1.19e-104 | 310 |
MS.gene76444.t1 | MTR_2g084110 | 48.742 | 318 | 155 | 2 | 13 | 330 | 8 | 317 | 1.89e-104 | 309 |
MS.gene76444.t1 | MTR_1g054205 | 50.645 | 310 | 144 | 3 | 30 | 330 | 17 | 326 | 2.05e-104 | 309 |
MS.gene76444.t1 | MTR_4g083710 | 47.416 | 329 | 156 | 4 | 5 | 330 | 10 | 324 | 3.27e-104 | 308 |
MS.gene76444.t1 | MTR_2g029740 | 49.342 | 304 | 153 | 1 | 28 | 330 | 27 | 330 | 8.40e-104 | 308 |
MS.gene76444.t1 | MTR_4g125940 | 50.637 | 314 | 150 | 2 | 21 | 331 | 19 | 330 | 6.68e-103 | 305 |
MS.gene76444.t1 | MTR_3g094650 | 48.589 | 319 | 154 | 3 | 11 | 327 | 9 | 319 | 1.04e-102 | 305 |
MS.gene76444.t1 | MTR_2g029910 | 48.012 | 327 | 161 | 3 | 14 | 331 | 7 | 333 | 1.25e-102 | 305 |
MS.gene76444.t1 | MTR_2g029750 | 47.706 | 327 | 164 | 2 | 11 | 330 | 4 | 330 | 1.66e-102 | 305 |
MS.gene76444.t1 | MTR_2g029860 | 49.669 | 302 | 151 | 1 | 30 | 330 | 29 | 330 | 2.62e-102 | 305 |
MS.gene76444.t1 | MTR_2g084090 | 50.000 | 302 | 142 | 3 | 30 | 330 | 25 | 318 | 2.32e-101 | 301 |
MS.gene76444.t1 | MTR_5g074760 | 51.803 | 305 | 135 | 5 | 30 | 330 | 25 | 321 | 7.94e-101 | 300 |
MS.gene76444.t1 | MTR_5g074970 | 51.140 | 307 | 138 | 4 | 28 | 330 | 28 | 326 | 3.72e-100 | 298 |
MS.gene76444.t1 | MTR_3g094670 | 50.000 | 322 | 151 | 3 | 11 | 330 | 9 | 322 | 9.39e-100 | 297 |
MS.gene76444.t1 | MTR_2g029850 | 50.336 | 298 | 147 | 1 | 34 | 330 | 33 | 330 | 1.40e-99 | 298 |
MS.gene76444.t1 | MTR_5g074740 | 51.475 | 305 | 136 | 5 | 30 | 330 | 25 | 321 | 1.50e-99 | 296 |
MS.gene76444.t1 | MTR_3g094630 | 50.311 | 322 | 150 | 3 | 11 | 330 | 9 | 322 | 1.73e-98 | 294 |
MS.gene76444.t1 | MTR_5g017850 | 47.734 | 331 | 164 | 5 | 1 | 330 | 4 | 326 | 5.99e-98 | 293 |
MS.gene76444.t1 | MTR_4g031140 | 47.508 | 301 | 154 | 3 | 30 | 330 | 28 | 324 | 1.22e-97 | 292 |
MS.gene76444.t1 | MTR_4g074995 | 46.364 | 330 | 147 | 5 | 4 | 330 | 6 | 308 | 1.65e-97 | 291 |
MS.gene76444.t1 | MTR_5g074710 | 50.820 | 305 | 138 | 5 | 30 | 330 | 25 | 321 | 1.98e-97 | 291 |
MS.gene76444.t1 | MTR_5g017860 | 46.526 | 331 | 168 | 4 | 1 | 330 | 4 | 326 | 9.80e-97 | 290 |
MS.gene76444.t1 | MTR_7g026990 | 48.852 | 305 | 147 | 3 | 26 | 330 | 27 | 322 | 1.02e-96 | 289 |
MS.gene76444.t1 | MTR_7g072480 | 47.923 | 313 | 152 | 5 | 19 | 330 | 14 | 316 | 1.25e-96 | 289 |
MS.gene76444.t1 | MTR_4g030890 | 48.185 | 303 | 153 | 3 | 28 | 330 | 98 | 396 | 1.89e-95 | 289 |
MS.gene76444.t1 | MTR_4g125940 | 52.899 | 276 | 125 | 2 | 59 | 331 | 2 | 275 | 7.43e-95 | 283 |
MS.gene76444.t1 | MTR_4g029200 | 46.535 | 303 | 154 | 2 | 28 | 330 | 44 | 338 | 1.35e-94 | 284 |
MS.gene76444.t1 | MTR_3g466180 | 47.531 | 324 | 153 | 3 | 7 | 330 | 17 | 323 | 1.81e-94 | 283 |
MS.gene76444.t1 | MTR_5g049280 | 46.026 | 302 | 159 | 3 | 34 | 331 | 37 | 338 | 3.41e-94 | 283 |
MS.gene76444.t1 | MTR_4g029190 | 48.366 | 306 | 147 | 4 | 28 | 330 | 43 | 340 | 3.75e-94 | 283 |
MS.gene76444.t1 | MTR_4g074990 | 45.122 | 328 | 147 | 5 | 6 | 330 | 8 | 305 | 8.78e-92 | 276 |
MS.gene76444.t1 | MTR_3g072190 | 55.426 | 258 | 107 | 2 | 73 | 330 | 2 | 251 | 3.70e-91 | 273 |
MS.gene76444.t1 | MTR_3g467600 | 45.342 | 322 | 163 | 5 | 13 | 330 | 12 | 324 | 9.18e-91 | 274 |
MS.gene76444.t1 | MTR_1g115900 | 45.048 | 313 | 162 | 3 | 20 | 330 | 17 | 321 | 1.12e-90 | 274 |
MS.gene76444.t1 | MTR_3g092990 | 47.213 | 305 | 159 | 2 | 28 | 331 | 24 | 327 | 3.76e-89 | 270 |
MS.gene76444.t1 | MTR_2g088770 | 45.687 | 313 | 167 | 3 | 19 | 330 | 15 | 325 | 6.20e-89 | 270 |
MS.gene76444.t1 | MTR_2g029830 | 50.388 | 258 | 127 | 1 | 75 | 331 | 5 | 262 | 8.33e-88 | 265 |
MS.gene76444.t1 | MTR_4g133800 | 45.791 | 297 | 151 | 6 | 35 | 330 | 46 | 333 | 2.97e-86 | 263 |
MS.gene76444.t1 | MTR_4g046713 | 45.033 | 302 | 163 | 3 | 30 | 330 | 27 | 326 | 5.99e-84 | 257 |
MS.gene76444.t1 | MTR_7g107520 | 43.865 | 326 | 175 | 5 | 5 | 330 | 3 | 320 | 2.10e-83 | 255 |
MS.gene76444.t1 | MTR_4g074980 | 41.846 | 325 | 151 | 6 | 6 | 330 | 8 | 294 | 8.00e-81 | 248 |
MS.gene76444.t1 | MTR_1g038680 | 44.518 | 301 | 162 | 5 | 34 | 330 | 33 | 332 | 1.56e-80 | 248 |
MS.gene76444.t1 | MTR_1g101830 | 42.121 | 330 | 174 | 9 | 3 | 330 | 8 | 322 | 1.76e-80 | 248 |
MS.gene76444.t1 | MTR_4g074980 | 47.490 | 259 | 120 | 4 | 6 | 261 | 8 | 253 | 2.56e-79 | 242 |
MS.gene76444.t1 | MTR_2g008710 | 44.186 | 301 | 158 | 5 | 34 | 330 | 31 | 325 | 8.16e-79 | 244 |
MS.gene76444.t1 | MTR_5g074860 | 41.641 | 329 | 134 | 6 | 5 | 329 | 11 | 285 | 3.01e-78 | 241 |
MS.gene76444.t1 | MTR_5g022870 | 41.515 | 330 | 179 | 6 | 1 | 330 | 1 | 316 | 9.91e-78 | 241 |
MS.gene76444.t1 | MTR_2g437770 | 43.667 | 300 | 158 | 7 | 34 | 332 | 54 | 343 | 4.15e-77 | 240 |
MS.gene76444.t1 | MTR_3g092990 | 44.918 | 305 | 155 | 3 | 28 | 331 | 24 | 316 | 9.22e-77 | 238 |
MS.gene76444.t1 | MTR_0155s0040 | 40.000 | 330 | 183 | 7 | 1 | 330 | 1 | 315 | 1.32e-75 | 235 |
MS.gene76444.t1 | MTR_8g075100 | 41.118 | 304 | 172 | 5 | 27 | 330 | 23 | 319 | 1.81e-75 | 235 |
MS.gene76444.t1 | MTR_1g086490 | 42.532 | 308 | 165 | 4 | 34 | 330 | 34 | 340 | 4.58e-75 | 234 |
MS.gene76444.t1 | MTR_1g086320 | 42.193 | 301 | 169 | 3 | 34 | 330 | 34 | 333 | 8.06e-75 | 234 |
MS.gene76444.t1 | MTR_4g114210 | 42.090 | 335 | 174 | 7 | 1 | 330 | 1 | 320 | 1.18e-74 | 233 |
MS.gene76444.t1 | MTR_7g086820 | 40.741 | 297 | 168 | 6 | 34 | 330 | 24 | 312 | 3.59e-73 | 229 |
MS.gene76444.t1 | MTR_1g077000 | 38.788 | 330 | 186 | 6 | 1 | 330 | 14 | 327 | 8.53e-73 | 228 |
MS.gene76444.t1 | MTR_7g086870 | 39.933 | 298 | 168 | 5 | 34 | 331 | 26 | 312 | 1.02e-72 | 228 |
MS.gene76444.t1 | MTR_1g025980 | 39.514 | 329 | 187 | 5 | 1 | 329 | 1 | 317 | 1.07e-72 | 228 |
MS.gene76444.t1 | MTR_6g027440 | 39.450 | 327 | 184 | 7 | 5 | 330 | 1 | 314 | 1.29e-72 | 228 |
MS.gene76444.t1 | MTR_1g066710 | 39.739 | 307 | 173 | 5 | 28 | 330 | 25 | 323 | 4.18e-71 | 224 |
MS.gene76444.t1 | MTR_5g016010 | 39.692 | 325 | 191 | 4 | 8 | 329 | 6 | 328 | 7.84e-71 | 223 |
MS.gene76444.t1 | MTR_8g062780 | 39.319 | 323 | 189 | 4 | 10 | 330 | 7 | 324 | 1.94e-70 | 222 |
MS.gene76444.t1 | MTR_6g043280 | 38.710 | 310 | 179 | 6 | 23 | 331 | 34 | 333 | 2.63e-68 | 217 |
MS.gene76444.t1 | MTR_1g066380 | 39.216 | 306 | 176 | 4 | 28 | 330 | 25 | 323 | 3.30e-67 | 214 |
MS.gene76444.t1 | MTR_4g087965 | 40.940 | 298 | 170 | 6 | 34 | 326 | 46 | 342 | 1.25e-66 | 213 |
MS.gene76444.t1 | MTR_2g067440 | 37.500 | 336 | 176 | 7 | 27 | 331 | 57 | 389 | 2.33e-66 | 214 |
MS.gene76444.t1 | MTR_6g043240 | 37.838 | 333 | 185 | 8 | 6 | 330 | 13 | 331 | 2.48e-66 | 213 |
MS.gene76444.t1 | MTR_7g029030 | 39.735 | 302 | 175 | 4 | 30 | 330 | 25 | 320 | 2.55e-66 | 211 |
MS.gene76444.t1 | MTR_1g009750 | 38.973 | 331 | 193 | 6 | 4 | 330 | 3 | 328 | 4.20e-66 | 211 |
MS.gene76444.t1 | MTR_1g090760 | 36.036 | 333 | 201 | 6 | 1 | 330 | 7 | 330 | 4.24e-65 | 209 |
MS.gene76444.t1 | MTR_2g078610 | 36.446 | 332 | 177 | 6 | 27 | 326 | 73 | 402 | 7.78e-65 | 210 |
MS.gene76444.t1 | MTR_1g066640 | 38.562 | 306 | 178 | 4 | 28 | 330 | 25 | 323 | 9.33e-65 | 207 |
MS.gene76444.t1 | MTR_4g132490 | 36.111 | 324 | 203 | 3 | 8 | 330 | 7 | 327 | 1.25e-64 | 207 |
MS.gene76444.t1 | MTR_2g077990 | 36.446 | 332 | 177 | 6 | 27 | 326 | 73 | 402 | 2.69e-64 | 209 |
MS.gene76444.t1 | MTR_2g008160 | 41.424 | 309 | 168 | 7 | 28 | 330 | 22 | 323 | 3.49e-64 | 206 |
MS.gene76444.t1 | MTR_3g105790 | 40.000 | 300 | 171 | 4 | 34 | 330 | 29 | 322 | 7.97e-64 | 205 |
MS.gene76444.t1 | MTR_1g066680 | 38.835 | 309 | 177 | 6 | 26 | 330 | 22 | 322 | 1.04e-63 | 205 |
MS.gene76444.t1 | MTR_4g127670 | 38.721 | 297 | 173 | 4 | 34 | 326 | 28 | 319 | 1.14e-63 | 205 |
MS.gene76444.t1 | MTR_2g099175 | 36.152 | 343 | 191 | 8 | 5 | 330 | 4 | 335 | 1.54e-63 | 205 |
MS.gene76444.t1 | MTR_4g095450 | 38.217 | 314 | 185 | 4 | 19 | 329 | 16 | 323 | 1.95e-63 | 204 |
MS.gene76444.t1 | MTR_6g043460 | 38.514 | 296 | 168 | 6 | 34 | 326 | 40 | 324 | 3.55e-62 | 202 |
MS.gene76444.t1 | MTR_2g078280 | 36.646 | 322 | 170 | 7 | 27 | 316 | 73 | 392 | 4.26e-60 | 197 |
MS.gene76444.t1 | MTR_0286s0010 | 36.928 | 306 | 187 | 5 | 28 | 330 | 32 | 334 | 2.44e-59 | 194 |
MS.gene76444.t1 | MTR_6g008075 | 36.928 | 306 | 187 | 5 | 28 | 330 | 32 | 334 | 2.44e-59 | 194 |
MS.gene76444.t1 | MTR_4g132110 | 34.615 | 338 | 203 | 7 | 1 | 330 | 1 | 328 | 2.31e-58 | 191 |
MS.gene76444.t1 | MTR_5g074700 | 45.494 | 233 | 103 | 6 | 101 | 330 | 3 | 214 | 7.48e-58 | 186 |
MS.gene76444.t1 | MTR_2g067450 | 36.538 | 312 | 184 | 7 | 27 | 331 | 8 | 312 | 5.13e-57 | 187 |
MS.gene76444.t1 | MTR_2g008730 | 37.874 | 301 | 153 | 5 | 34 | 330 | 31 | 301 | 5.67e-57 | 187 |
MS.gene76444.t1 | MTR_3g072210 | 51.309 | 191 | 85 | 2 | 141 | 330 | 55 | 238 | 7.14e-57 | 184 |
MS.gene76444.t1 | MTR_4g132110 | 34.111 | 343 | 203 | 8 | 1 | 330 | 1 | 333 | 3.40e-56 | 186 |
MS.gene76444.t1 | MTR_1g066380 | 38.846 | 260 | 149 | 4 | 74 | 330 | 3 | 255 | 8.92e-56 | 182 |
MS.gene76444.t1 | MTR_5g033470 | 36.246 | 309 | 187 | 5 | 29 | 330 | 72 | 377 | 1.87e-55 | 185 |
MS.gene76444.t1 | MTR_1g009750 | 35.562 | 329 | 190 | 7 | 4 | 330 | 3 | 311 | 1.57e-53 | 178 |
MS.gene76444.t1 | MTR_2g008160 | 37.540 | 309 | 145 | 7 | 28 | 330 | 22 | 288 | 2.25e-51 | 172 |
MS.gene76444.t1 | MTR_0147s0010 | 33.227 | 313 | 174 | 4 | 34 | 326 | 81 | 378 | 3.83e-46 | 161 |
MS.gene76444.t1 | MTR_3g105790 | 40.586 | 239 | 137 | 3 | 95 | 330 | 10 | 246 | 9.34e-46 | 156 |
MS.gene76444.t1 | MTR_7g072490 | 40.678 | 236 | 78 | 3 | 76 | 311 | 2 | 175 | 9.40e-45 | 152 |
MS.gene76444.t1 | MTR_2g029880 | 43.299 | 194 | 97 | 3 | 140 | 331 | 7 | 189 | 3.43e-44 | 151 |
MS.gene76444.t1 | MTR_2g008160 | 47.126 | 174 | 84 | 4 | 28 | 199 | 22 | 189 | 3.49e-43 | 148 |
MS.gene76444.t1 | MTR_3g072260 | 65.138 | 109 | 38 | 0 | 30 | 138 | 26 | 134 | 2.29e-42 | 144 |
MS.gene76444.t1 | MTR_2g078560 | 30.942 | 223 | 122 | 4 | 135 | 326 | 95 | 316 | 1.39e-29 | 115 |
MS.gene76444.t1 | MTR_2g077980 | 28.417 | 278 | 159 | 8 | 92 | 331 | 11 | 286 | 2.10e-25 | 103 |
MS.gene76444.t1 | MTR_1g089005 | 41.304 | 138 | 69 | 3 | 11 | 142 | 1 | 132 | 4.96e-25 | 99.4 |
MS.gene76444.t1 | MTR_3g462850 | 40.278 | 144 | 78 | 5 | 194 | 331 | 9 | 150 | 9.11e-24 | 95.5 |
MS.gene76444.t1 | MTR_7g086790 | 35.979 | 189 | 99 | 6 | 77 | 265 | 17 | 183 | 3.43e-23 | 95.5 |
MS.gene76444.t1 | MTR_4g031040 | 36.571 | 175 | 67 | 3 | 89 | 263 | 1 | 131 | 1.26e-21 | 89.4 |
MS.gene76444.t1 | MTR_6g048160 | 60.563 | 71 | 24 | 2 | 69 | 139 | 22 | 88 | 4.90e-21 | 86.3 |
MS.gene76444.t1 | MTR_5g058120 | 33.537 | 164 | 93 | 4 | 165 | 326 | 6 | 155 | 9.51e-19 | 84.7 |
MS.gene76444.t1 | MTR_4g114220 | 52.439 | 82 | 29 | 2 | 56 | 137 | 29 | 100 | 1.14e-18 | 81.6 |
MS.gene76444.t1 | MTR_5g074770 | 46.667 | 90 | 46 | 2 | 241 | 329 | 20 | 108 | 2.22e-18 | 79.7 |
MS.gene76444.t1 | MTR_7g086810 | 34.711 | 121 | 53 | 1 | 28 | 148 | 4 | 98 | 6.70e-18 | 82.0 |
MS.gene76444.t1 | MTR_1g098320 | 43.038 | 79 | 44 | 1 | 252 | 330 | 47 | 124 | 5.55e-16 | 74.3 |
MS.gene76444.t1 | MTR_3g107060 | 28.090 | 267 | 117 | 9 | 61 | 311 | 105 | 312 | 1.12e-15 | 77.0 |
MS.gene76444.t1 | MTR_4g012865 | 53.846 | 65 | 30 | 0 | 33 | 97 | 80 | 144 | 1.81e-15 | 73.2 |
MS.gene76444.t1 | MTR_2g029930 | 41.860 | 86 | 25 | 2 | 34 | 108 | 23 | 94 | 8.93e-15 | 69.7 |
MS.gene76444.t1 | MTR_7g086785 | 45.946 | 74 | 39 | 1 | 75 | 148 | 3 | 75 | 2.77e-14 | 69.3 |
MS.gene76444.t1 | MTR_7g107500 | 48.052 | 77 | 38 | 2 | 254 | 330 | 23 | 97 | 2.69e-13 | 65.5 |
MS.gene76444.t1 | MTR_3g088160 | 28.713 | 202 | 105 | 9 | 123 | 312 | 180 | 354 | 1.56e-11 | 65.1 |
MS.gene76444.t1 | MTR_3g088160 | 28.713 | 202 | 105 | 9 | 123 | 312 | 180 | 354 | 2.12e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76444.t1 | AT5G66390 | 75.976 | 333 | 77 | 2 | 1 | 330 | 1 | 333 | 0.0 | 530 |
MS.gene76444.t1 | AT4G36430 | 68.278 | 331 | 105 | 0 | 1 | 331 | 1 | 331 | 4.46e-165 | 463 |
MS.gene76444.t1 | AT2G18150 | 66.369 | 336 | 107 | 1 | 1 | 330 | 1 | 336 | 1.09e-164 | 462 |
MS.gene76444.t1 | AT3G50990 | 65.244 | 328 | 109 | 1 | 8 | 330 | 14 | 341 | 1.62e-154 | 437 |
MS.gene76444.t1 | AT2G18140 | 61.194 | 335 | 125 | 1 | 1 | 330 | 1 | 335 | 5.10e-149 | 423 |
MS.gene76444.t1 | AT1G44970 | 64.803 | 304 | 106 | 1 | 28 | 330 | 43 | 346 | 1.10e-138 | 397 |
MS.gene76444.t1 | AT2G35380 | 54.662 | 311 | 132 | 3 | 27 | 330 | 27 | 335 | 2.85e-112 | 329 |
MS.gene76444.t1 | AT4G08780 | 54.098 | 305 | 137 | 2 | 30 | 331 | 24 | 328 | 8.99e-112 | 328 |
MS.gene76444.t1 | AT4G08770 | 54.098 | 305 | 137 | 2 | 30 | 331 | 24 | 328 | 3.11e-111 | 327 |
MS.gene76444.t1 | AT5G06720 | 52.649 | 302 | 142 | 1 | 30 | 330 | 32 | 333 | 9.09e-110 | 323 |
MS.gene76444.t1 | AT3G49110 | 50.932 | 322 | 155 | 2 | 13 | 331 | 16 | 337 | 1.21e-107 | 318 |
MS.gene76444.t1 | AT3G32980 | 51.746 | 315 | 148 | 3 | 21 | 331 | 21 | 335 | 2.18e-107 | 318 |
MS.gene76444.t1 | AT3G49120 | 52.273 | 308 | 144 | 2 | 27 | 331 | 29 | 336 | 1.21e-105 | 313 |
MS.gene76444.t1 | AT2G38390 | 51.485 | 303 | 145 | 2 | 30 | 330 | 31 | 333 | 2.18e-105 | 312 |
MS.gene76444.t1 | AT5G06730 | 50.000 | 302 | 150 | 1 | 30 | 330 | 33 | 334 | 2.02e-104 | 310 |
MS.gene76444.t1 | AT5G05340 | 50.495 | 303 | 140 | 3 | 30 | 330 | 30 | 324 | 3.02e-103 | 306 |
MS.gene76444.t1 | AT5G19890 | 50.467 | 321 | 150 | 4 | 13 | 330 | 13 | 327 | 1.19e-101 | 302 |
MS.gene76444.t1 | AT2G38380 | 50.495 | 303 | 148 | 2 | 30 | 330 | 31 | 333 | 4.97e-100 | 299 |
MS.gene76444.t1 | AT1G14550 | 46.809 | 329 | 161 | 4 | 4 | 330 | 5 | 321 | 6.43e-100 | 297 |
MS.gene76444.t1 | AT4G16270 | 50.000 | 298 | 145 | 3 | 34 | 330 | 54 | 348 | 7.53e-99 | 296 |
MS.gene76444.t1 | AT1G49570 | 52.189 | 297 | 138 | 3 | 33 | 326 | 51 | 346 | 1.59e-98 | 295 |
MS.gene76444.t1 | AT5G58400 | 49.671 | 304 | 142 | 4 | 30 | 330 | 30 | 325 | 2.23e-98 | 293 |
MS.gene76444.t1 | AT2G22420 | 48.684 | 304 | 152 | 3 | 27 | 330 | 20 | 319 | 2.30e-98 | 294 |
MS.gene76444.t1 | AT5G58390 | 48.012 | 327 | 151 | 5 | 7 | 330 | 6 | 316 | 3.15e-97 | 290 |
MS.gene76444.t1 | AT1G68850 | 44.884 | 303 | 162 | 3 | 34 | 331 | 34 | 336 | 2.76e-91 | 276 |
MS.gene76444.t1 | AT1G14540 | 42.593 | 324 | 171 | 2 | 7 | 330 | 7 | 315 | 4.67e-91 | 275 |
MS.gene76444.t1 | AT3G03670 | 43.465 | 329 | 170 | 5 | 6 | 330 | 5 | 321 | 5.54e-89 | 270 |
MS.gene76444.t1 | AT1G05260 | 45.545 | 303 | 162 | 3 | 30 | 331 | 26 | 326 | 1.66e-86 | 263 |
MS.gene76444.t1 | AT4G11290 | 43.293 | 328 | 177 | 4 | 5 | 330 | 6 | 326 | 2.92e-86 | 263 |
MS.gene76444.t1 | AT5G19880 | 42.813 | 327 | 177 | 4 | 8 | 330 | 9 | 329 | 6.84e-85 | 259 |
MS.gene76444.t1 | AT2G35380 | 53.012 | 249 | 108 | 3 | 89 | 330 | 1 | 247 | 8.82e-84 | 254 |
MS.gene76444.t1 | AT5G15180 | 43.711 | 318 | 170 | 4 | 13 | 330 | 21 | 329 | 1.89e-83 | 256 |
MS.gene76444.t1 | AT3G21770 | 44.667 | 300 | 163 | 3 | 30 | 328 | 29 | 326 | 2.22e-81 | 250 |
MS.gene76444.t1 | AT5G64120 | 43.434 | 297 | 161 | 5 | 34 | 330 | 39 | 328 | 5.01e-81 | 249 |
MS.gene76444.t1 | AT1G71695 | 41.716 | 338 | 179 | 7 | 5 | 331 | 10 | 340 | 6.93e-81 | 250 |
MS.gene76444.t1 | AT5G17820 | 39.394 | 330 | 183 | 6 | 1 | 330 | 1 | 313 | 5.92e-79 | 244 |
MS.gene76444.t1 | AT5G42180 | 44.333 | 300 | 161 | 4 | 30 | 329 | 23 | 316 | 4.31e-78 | 241 |
MS.gene76444.t1 | AT5G17820 | 39.394 | 330 | 183 | 6 | 1 | 330 | 54 | 366 | 5.95e-78 | 243 |
MS.gene76444.t1 | AT5G51890 | 39.759 | 332 | 186 | 7 | 1 | 330 | 3 | 322 | 1.17e-76 | 238 |
MS.gene76444.t1 | AT3G01190 | 43.098 | 297 | 164 | 4 | 34 | 330 | 30 | 321 | 2.11e-76 | 237 |
MS.gene76444.t1 | AT2G41480 | 43.046 | 302 | 161 | 5 | 34 | 330 | 33 | 328 | 5.14e-76 | 236 |
MS.gene76444.t1 | AT2G39040 | 44.079 | 304 | 160 | 7 | 34 | 330 | 50 | 350 | 3.25e-75 | 235 |
MS.gene76444.t1 | AT1G05240 | 41.584 | 303 | 164 | 6 | 34 | 330 | 30 | 325 | 9.91e-74 | 231 |
MS.gene76444.t1 | AT1G05250 | 41.584 | 303 | 164 | 6 | 34 | 330 | 30 | 325 | 9.91e-74 | 231 |
MS.gene76444.t1 | AT5G39580 | 41.667 | 300 | 163 | 7 | 34 | 330 | 29 | 319 | 3.49e-73 | 229 |
MS.gene76444.t1 | AT4G26010 | 39.617 | 313 | 174 | 6 | 19 | 330 | 11 | 309 | 2.03e-72 | 227 |
MS.gene76444.t1 | AT4G26010 | 39.617 | 313 | 174 | 6 | 19 | 330 | 39 | 337 | 4.32e-72 | 227 |
MS.gene76444.t1 | AT5G64100 | 41.806 | 299 | 164 | 5 | 34 | 330 | 41 | 331 | 1.89e-70 | 223 |
MS.gene76444.t1 | AT4G33870 | 37.313 | 335 | 171 | 5 | 28 | 326 | 66 | 397 | 3.60e-69 | 221 |
MS.gene76444.t1 | AT4G33420 | 40.426 | 329 | 178 | 8 | 2 | 330 | 15 | 325 | 6.62e-69 | 218 |
MS.gene76444.t1 | AT4G33420 | 40.426 | 329 | 178 | 8 | 2 | 330 | 62 | 372 | 2.60e-68 | 218 |
MS.gene76444.t1 | AT4G37520 | 37.908 | 306 | 186 | 3 | 28 | 330 | 25 | 329 | 8.23e-68 | 216 |
MS.gene76444.t1 | AT2G37130 | 39.867 | 301 | 170 | 5 | 34 | 330 | 3 | 296 | 3.21e-67 | 213 |
MS.gene76444.t1 | AT1G34510 | 38.924 | 316 | 178 | 6 | 16 | 330 | 8 | 309 | 4.13e-67 | 213 |
MS.gene76444.t1 | AT2G37130 | 39.867 | 301 | 170 | 5 | 34 | 330 | 34 | 327 | 5.89e-67 | 213 |
MS.gene76444.t1 | AT5G40150 | 39.344 | 305 | 177 | 4 | 28 | 330 | 30 | 328 | 6.61e-67 | 213 |
MS.gene76444.t1 | AT5G47000 | 37.730 | 326 | 193 | 5 | 7 | 330 | 13 | 330 | 7.36e-67 | 213 |
MS.gene76444.t1 | AT5G64110 | 41.667 | 300 | 165 | 6 | 34 | 330 | 38 | 330 | 1.04e-66 | 213 |
MS.gene76444.t1 | AT4G37530 | 38.235 | 306 | 185 | 3 | 28 | 330 | 25 | 329 | 1.46e-66 | 212 |
MS.gene76444.t1 | AT3G28200 | 38.689 | 305 | 178 | 4 | 28 | 330 | 19 | 316 | 2.23e-66 | 211 |
MS.gene76444.t1 | AT1G30870 | 40.864 | 301 | 166 | 6 | 34 | 331 | 55 | 346 | 2.69e-66 | 212 |
MS.gene76444.t1 | AT4G25980 | 38.742 | 302 | 175 | 5 | 34 | 330 | 30 | 326 | 2.91e-66 | 211 |
MS.gene76444.t1 | AT2G34060 | 40.132 | 304 | 176 | 5 | 30 | 328 | 42 | 344 | 3.80e-66 | 212 |
MS.gene76444.t1 | AT4G37520 | 37.582 | 306 | 184 | 4 | 28 | 330 | 25 | 326 | 3.85e-66 | 211 |
MS.gene76444.t1 | AT1G24110 | 37.879 | 330 | 194 | 7 | 6 | 332 | 3 | 324 | 6.46e-66 | 211 |
MS.gene76444.t1 | AT2G18980 | 37.237 | 333 | 196 | 5 | 1 | 330 | 1 | 323 | 1.80e-65 | 209 |
MS.gene76444.t1 | AT5G14130 | 35.604 | 323 | 203 | 5 | 9 | 330 | 12 | 330 | 3.49e-65 | 209 |
MS.gene76444.t1 | AT4G17690 | 38.944 | 303 | 177 | 4 | 30 | 330 | 26 | 322 | 4.78e-65 | 208 |
MS.gene76444.t1 | AT1G77100 | 40.000 | 335 | 175 | 11 | 5 | 330 | 2 | 319 | 5.89e-65 | 208 |
MS.gene76444.t1 | AT4G31760 | 38.700 | 323 | 188 | 5 | 10 | 330 | 12 | 326 | 1.13e-64 | 207 |
MS.gene76444.t1 | AT5G14130 | 35.604 | 323 | 203 | 5 | 9 | 330 | 53 | 371 | 1.28e-64 | 209 |
MS.gene76444.t1 | AT5G67400 | 37.908 | 306 | 186 | 3 | 28 | 330 | 25 | 329 | 5.09e-63 | 203 |
MS.gene76444.t1 | AT2G24800 | 38.667 | 300 | 176 | 5 | 34 | 330 | 35 | 329 | 5.37e-63 | 203 |
MS.gene76444.t1 | AT5G22410 | 36.810 | 326 | 187 | 9 | 7 | 327 | 11 | 322 | 8.64e-63 | 202 |
MS.gene76444.t1 | AT3G49960 | 37.667 | 300 | 183 | 3 | 34 | 330 | 31 | 329 | 1.63e-62 | 202 |
MS.gene76444.t1 | AT2G43480 | 37.338 | 308 | 180 | 7 | 28 | 330 | 36 | 335 | 4.87e-61 | 198 |
MS.gene76444.t1 | AT4G30170 | 35.922 | 309 | 188 | 5 | 26 | 330 | 23 | 325 | 2.34e-60 | 196 |
MS.gene76444.t1 | AT4G21960 | 37.000 | 300 | 179 | 4 | 34 | 330 | 35 | 327 | 4.71e-59 | 193 |
MS.gene76444.t1 | AT5G24070 | 37.248 | 298 | 175 | 6 | 38 | 330 | 45 | 335 | 6.45e-59 | 193 |
MS.gene76444.t1 | AT4G37530 | 37.945 | 253 | 154 | 2 | 30 | 279 | 27 | 279 | 3.84e-54 | 179 |
MS.gene76444.t1 | AT3G17070 | 33.993 | 303 | 189 | 6 | 34 | 330 | 42 | 339 | 7.73e-50 | 169 |
MS.gene76444.t1 | AT4G25980 | 46.341 | 164 | 84 | 3 | 34 | 197 | 75 | 234 | 7.10e-44 | 152 |
MS.gene76444.t1 | AT5G39580 | 45.029 | 171 | 89 | 3 | 34 | 204 | 29 | 194 | 3.23e-43 | 149 |
MS.gene76444.t1 | AT2G24800 | 40.933 | 193 | 108 | 2 | 34 | 224 | 35 | 223 | 7.26e-38 | 135 |
MS.gene76444.t1 | AT3G17070 | 31.900 | 279 | 178 | 7 | 58 | 330 | 4 | 276 | 9.28e-37 | 133 |
MS.gene76444.t1 | AT3G42570 | 39.560 | 91 | 54 | 1 | 106 | 195 | 57 | 147 | 1.76e-13 | 67.4 |
MS.gene76444.t1 | AT4G08390 | 29.327 | 208 | 108 | 8 | 117 | 312 | 179 | 359 | 1.26e-12 | 68.6 |
MS.gene76444.t1 | AT4G08390 | 29.327 | 208 | 108 | 8 | 117 | 312 | 180 | 360 | 1.42e-12 | 68.2 |
MS.gene76444.t1 | AT4G08390 | 29.327 | 208 | 108 | 8 | 117 | 312 | 180 | 360 | 1.42e-12 | 68.2 |
MS.gene76444.t1 | AT4G08390 | 29.327 | 208 | 108 | 8 | 117 | 312 | 180 | 360 | 1.42e-12 | 68.2 |
Find 66 sgRNAs with CRISPR-Local
Find 102 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTGATCTTGTTGCTCTTTC+TGG | 0.030538 | 8.1:+30881209 | MS.gene76444:CDS |
TTGCCTCTGTCACAAGAAAA+TGG | 0.164002 | 8.1:+30880253 | MS.gene76444:CDS |
AGTTTCTTGTGCTGACATTT+TGG | 0.198437 | 8.1:+30880783 | MS.gene76444:CDS |
AGTCTAGGAAGAACAGATTT+TGG | 0.315899 | 8.1:-30881814 | None:intergenic |
CTTGCTTGCCATTTCCAGTT+TGG | 0.325339 | 8.1:-30881727 | None:intergenic |
TTCTTGTGACAGAGGCAAAA+AGG | 0.331440 | 8.1:-30880248 | None:intergenic |
TTGTCTGGAATGTGTTGTTT+GGG | 0.331686 | 8.1:-30881151 | None:intergenic |
CCTAGAGGCACTTCCCAGTT+TGG | 0.335817 | 8.1:-30881074 | None:intergenic |
CAATTACTTCAAGAACCTAT+TGG | 0.348212 | 8.1:+30881862 | MS.gene76444:CDS |
ATTGTCTGGAATGTGTTGTT+TGG | 0.359012 | 8.1:-30881152 | None:intergenic |
CGCACTCAATGTCCAAAATC+TGG | 0.374881 | 8.1:+30881785 | MS.gene76444:CDS |
TGCCTCTGTCACAAGAAAAT+GGG | 0.376488 | 8.1:+30880254 | MS.gene76444:CDS |
CTCTACAACCAAACTGGAAA+TGG | 0.376548 | 8.1:+30881719 | MS.gene76444:CDS |
AGTCAAGGTGCACCAGCTTT+AGG | 0.378431 | 8.1:+30881690 | MS.gene76444:CDS |
CTGACTAAATTCAAACTTCA+AGG | 0.398099 | 8.1:+30881176 | MS.gene76444:CDS |
TGAATTTAGTCAGGATTGTC+TGG | 0.402260 | 8.1:-30881166 | None:intergenic |
AGTCATAGAATTGTGGATAA+AGG | 0.404312 | 8.1:-30880283 | None:intergenic |
CAAAGACTCTACAACCAAAC+TGG | 0.405912 | 8.1:+30881713 | MS.gene76444:CDS |
CAAGAACCTATTGGCTTACA+AGG | 0.407095 | 8.1:+30881871 | MS.gene76444:CDS |
CTTGAAGTTTGAATTTAGTC+AGG | 0.409451 | 8.1:-30881175 | None:intergenic |
TGGAATGTGTTGTTTGGGGC+TGG | 0.416065 | 8.1:-30881146 | None:intergenic |
TGTAGGCTGGTGGACCAAAC+TGG | 0.428965 | 8.1:+30881060 | MS.gene76444:intron |
TGGGGCTGGAATGTTGTTGT+TGG | 0.431670 | 8.1:-30881132 | None:intergenic |
CCTCTAGCTGAATTACGGTT+AGG | 0.445893 | 8.1:-30880706 | None:intergenic |
GAAACATTAGAACAAATTGC+AGG | 0.446729 | 8.1:+30882047 | MS.gene76444:CDS |
CAAATCCTCTAGCTGAATTA+CGG | 0.449179 | 8.1:-30880711 | None:intergenic |
ATAGTCCCTTGTAAGCCAAT+AGG | 0.450211 | 8.1:-30881877 | None:intergenic |
TATCTCCTTTGACAGGTTCA+AGG | 0.463087 | 8.1:+30882023 | MS.gene76444:CDS |
GTAGAGTCTTTGCCTAAAGC+TGG | 0.469738 | 8.1:-30881702 | None:intergenic |
TGTAAAGGGAGCCACACTAT+AGG | 0.470026 | 8.1:+30881665 | MS.gene76444:intron |
TAATTCAGCTAGAGGATTTG+AGG | 0.484271 | 8.1:+30880714 | MS.gene76444:CDS |
GAATCAAGAATCAGCTGAGT+TGG | 0.487866 | 8.1:+30881928 | MS.gene76444:CDS |
GGAAATATATCTCCTTTGAC+AGG | 0.492948 | 8.1:+30882016 | MS.gene76444:CDS |
TCACTAGGTGCAAGCTTAAG+TGG | 0.493970 | 8.1:+30881107 | MS.gene76444:CDS |
TGCTAAGTCTATGATCAAGA+TGG | 0.505230 | 8.1:+30881994 | MS.gene76444:CDS |
TTAACAATATTCTGAGCTTG+TGG | 0.514680 | 8.1:-30880314 | None:intergenic |
ATCTCCTTTGACAGGTTCAA+GGG | 0.516893 | 8.1:+30882024 | MS.gene76444:CDS |
ATTGCAGGGTGATTAATACT+TGG | 0.516904 | 8.1:+30882062 | MS.gene76444:CDS |
GGAAGCATTATTAGTGAGAA+GGG | 0.519034 | 8.1:+30880676 | MS.gene76444:CDS |
AGTTGAATCTCTAGCAGCTA+TGG | 0.522154 | 8.1:-30880806 | None:intergenic |
TGCAACAGCATTGACAAGGA+TGG | 0.547409 | 8.1:-30880339 | None:intergenic |
CCTTTGCAACAGCATTGACA+AGG | 0.551381 | 8.1:-30880343 | None:intergenic |
TTGTTGGTGTGACATAGTCT+AGG | 0.552976 | 8.1:-30881829 | None:intergenic |
GCTAAGTCTATGATCAAGAT+GGG | 0.554946 | 8.1:+30881995 | MS.gene76444:CDS |
TGGAAGCATTATTAGTGAGA+AGG | 0.555986 | 8.1:+30880675 | MS.gene76444:CDS |
TTTCCCCTTGAACCTGTCAA+AGG | 0.564091 | 8.1:-30882028 | None:intergenic |
CCAAACTGGGAAGTGCCTCT+AGG | 0.565559 | 8.1:+30881074 | MS.gene76444:CDS |
CCTTGTCAATGCTGTTGCAA+AGG | 0.566258 | 8.1:+30880343 | MS.gene76444:CDS |
ACCTTGACTTTCCTATAGTG+TGG | 0.568848 | 8.1:-30881676 | None:intergenic |
CATGAATAGTCATAGAATTG+TGG | 0.570755 | 8.1:-30880290 | None:intergenic |
CCTAACCGTAATTCAGCTAG+AGG | 0.578401 | 8.1:+30880706 | MS.gene76444:CDS |
GCCTCTGTCACAAGAAAATG+GGG | 0.581460 | 8.1:+30880255 | MS.gene76444:CDS |
TCAGCACAAGAAACTGTATG+AGG | 0.582884 | 8.1:-30880775 | None:intergenic |
ATACCTTGACAAAACAGTCA+TGG | 0.595491 | 8.1:-30880403 | None:intergenic |
TCAATATTGTTAGATAACAG+TGG | 0.609885 | 8.1:+30880655 | MS.gene76444:CDS |
TGTCTGGAATGTGTTGTTTG+GGG | 0.613894 | 8.1:-30881150 | None:intergenic |
CTAGGCAGAAGAGACTCACT+AGG | 0.615944 | 8.1:+30881092 | MS.gene76444:CDS |
AAACATTAGAACAAATTGCA+GGG | 0.636631 | 8.1:+30882048 | MS.gene76444:CDS |
TCTCCTTTGACAGGTTCAAG+GGG | 0.642331 | 8.1:+30882025 | MS.gene76444:CDS |
AGTGAGTCTCTTCTGCCTAG+AGG | 0.647836 | 8.1:-30881089 | None:intergenic |
AAGAACCTATTGGCTTACAA+GGG | 0.648661 | 8.1:+30881872 | MS.gene76444:CDS |
ACTCAATGTCCAAAATCTGG+TGG | 0.654856 | 8.1:+30881788 | MS.gene76444:CDS |
GTAGGCTGGTGGACCAAACT+GGG | 0.661267 | 8.1:+30881061 | MS.gene76444:intron |
GCCACACTATAGGAAAGTCA+AGG | 0.668868 | 8.1:+30881675 | MS.gene76444:CDS |
GAAGCATTATTAGTGAGAAG+GGG | 0.684218 | 8.1:+30880677 | MS.gene76444:CDS |
AAAAGTGAAGCAGCTATACG+AGG | 0.700714 | 8.1:-30880368 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAAACCAAATATAATTTA+TGG | - | chr8.1:30880911-30880930 | None:intergenic | 10.0% |
!! | CATATATAAATTTGAATTTG+AGG | - | chr8.1:30881374-30881393 | None:intergenic | 15.0% |
!! | AAAAGATAAAATAGAGCTTA+TGG | - | chr8.1:30880935-30880954 | None:intergenic | 20.0% |
!! | ACATGTCCATAAATTATATT+TGG | + | chr8.1:30880902-30880921 | MS.gene76444:intron | 20.0% |
!! | AGTCTGATTTAAATAGATAT+AGG | - | chr8.1:30881330-30881349 | None:intergenic | 20.0% |
!! | GTCTGATTTAAATAGATATA+GGG | - | chr8.1:30881329-30881348 | None:intergenic | 20.0% |
!! | TAATATTATATTATTCTCCG+TGG | + | chr8.1:30881478-30881497 | MS.gene76444:intron | 20.0% |
!! | TTGAATGTAATCATATATGT+TGG | - | chr8.1:30880582-30880601 | None:intergenic | 20.0% |
! | AAACATTAGAACAAATTGCA+GGG | + | chr8.1:30882048-30882067 | MS.gene76444:CDS | 25.0% |
! | AAATTTATGTGACAAGTTCA+AGG | - | chr8.1:30881241-30881260 | None:intergenic | 25.0% |
! | AAATTTCGTGCAATTGTAAA+GGG | + | chr8.1:30881651-30881670 | MS.gene76444:intron | 25.0% |
! | AATGACTATTTACTTAGCTA+CGG | - | chr8.1:30881594-30881613 | None:intergenic | 25.0% |
! | TCAATATTGTTAGATAACAG+TGG | + | chr8.1:30880655-30880674 | MS.gene76444:CDS | 25.0% |
!! | TAATTGTTGTCGAATTTTGT+TGG | - | chr8.1:30881848-30881867 | None:intergenic | 25.0% |
!! | TTACTATTCCTTTTATGTGT+AGG | + | chr8.1:30881043-30881062 | MS.gene76444:intron | 25.0% |
AGTCATAGAATTGTGGATAA+AGG | - | chr8.1:30880286-30880305 | None:intergenic | 30.0% | |
CAAATTTCGTGCAATTGTAA+AGG | + | chr8.1:30881650-30881669 | MS.gene76444:intron | 30.0% | |
CAATTACTTCAAGAACCTAT+TGG | + | chr8.1:30881862-30881881 | MS.gene76444:CDS | 30.0% | |
CATGAATAGTCATAGAATTG+TGG | - | chr8.1:30880293-30880312 | None:intergenic | 30.0% | |
CTATTACCTACATCACATTT+AGG | - | chr8.1:30881450-30881469 | None:intergenic | 30.0% | |
CTGACTAAATTCAAACTTCA+AGG | + | chr8.1:30881176-30881195 | MS.gene76444:CDS | 30.0% | |
CTTGAAGTTTGAATTTAGTC+AGG | - | chr8.1:30881178-30881197 | None:intergenic | 30.0% | |
GAAACATTAGAACAAATTGC+AGG | + | chr8.1:30882047-30882066 | MS.gene76444:CDS | 30.0% | |
TACCAAAAACTTTGATGTTG+CGG | + | chr8.1:30880474-30880493 | MS.gene76444:intron | 30.0% | |
TTAACAATATTCTGAGCTTG+TGG | - | chr8.1:30880317-30880336 | None:intergenic | 30.0% | |
!!! | CAACATCAAAGTTTTTGGTA+CGG | - | chr8.1:30880474-30880493 | None:intergenic | 30.0% |
ATACCACCTAAATGTGATGT+AGG | + | chr8.1:30881441-30881460 | MS.gene76444:intron | 35.0% | |
ATACCTTGACAAAACAGTCA+TGG | - | chr8.1:30880406-30880425 | None:intergenic | 35.0% | |
ATTGCAGGGTGATTAATACT+TGG | + | chr8.1:30882062-30882081 | MS.gene76444:CDS | 35.0% | |
CAAATCCTCTAGCTGAATTA+CGG | - | chr8.1:30880714-30880733 | None:intergenic | 35.0% | |
GCAAGTGATGCTTAAACTTT+AGG | - | chr8.1:30881548-30881567 | None:intergenic | 35.0% | |
GCTAAGTCTATGATCAAGAT+GGG | + | chr8.1:30881995-30882014 | MS.gene76444:CDS | 35.0% | |
GGAAATATATCTCCTTTGAC+AGG | + | chr8.1:30882016-30882035 | MS.gene76444:CDS | 35.0% | |
TAATTCAGCTAGAGGATTTG+AGG | + | chr8.1:30880714-30880733 | MS.gene76444:CDS | 35.0% | |
TGAATTTAGTCAGGATTGTC+TGG | - | chr8.1:30881169-30881188 | None:intergenic | 35.0% | |
TGCTAAGTCTATGATCAAGA+TGG | + | chr8.1:30881994-30882013 | MS.gene76444:CDS | 35.0% | |
TTACCTACATCACATTTAGG+TGG | - | chr8.1:30881447-30881466 | None:intergenic | 35.0% | |
TTATCACATATGTCAGTCCA+CGG | - | chr8.1:30881498-30881517 | None:intergenic | 35.0% | |
! | AAGAAGTTGATCATGTTGCA+GGG | + | chr8.1:30880622-30880641 | MS.gene76444:intron | 35.0% |
! | AGTCTAGGAAGAACAGATTT+TGG | - | chr8.1:30881817-30881836 | None:intergenic | 35.0% |
! | ATTGTCTGGAATGTGTTGTT+TGG | - | chr8.1:30881155-30881174 | None:intergenic | 35.0% |
! | GAAGCATTATTAGTGAGAAG+GGG | + | chr8.1:30880677-30880696 | MS.gene76444:CDS | 35.0% |
! | TAAGAAGTTGATCATGTTGC+AGG | + | chr8.1:30880621-30880640 | MS.gene76444:intron | 35.0% |
! | TATTCCTTTTATGTGTAGGC+TGG | + | chr8.1:30881047-30881066 | MS.gene76444:intron | 35.0% |
! | TTTCCATGACTGTTTTGTCA+AGG | + | chr8.1:30880400-30880419 | MS.gene76444:CDS | 35.0% |
!! | AAGAACCTATTGGCTTACAA+GGG | + | chr8.1:30881872-30881891 | MS.gene76444:CDS | 35.0% |
!! | AGTTTCTTGTGCTGACATTT+TGG | + | chr8.1:30880783-30880802 | MS.gene76444:CDS | 35.0% |
!! | GGAAGCATTATTAGTGAGAA+GGG | + | chr8.1:30880676-30880695 | MS.gene76444:CDS | 35.0% |
!! | TGGAAGCATTATTAGTGAGA+AGG | + | chr8.1:30880675-30880694 | MS.gene76444:CDS | 35.0% |
!! | TTGTCTGGAATGTGTTGTTT+GGG | - | chr8.1:30881154-30881173 | None:intergenic | 35.0% |
AAAAGTGAAGCAGCTATACG+AGG | - | chr8.1:30880371-30880390 | None:intergenic | 40.0% | |
ACCTTGACTTTCCTATAGTG+TGG | - | chr8.1:30881679-30881698 | None:intergenic | 40.0% | |
ACTCAATGTCCAAAATCTGG+TGG | + | chr8.1:30881788-30881807 | MS.gene76444:CDS | 40.0% | |
AGTTGAATCTCTAGCAGCTA+TGG | - | chr8.1:30880809-30880828 | None:intergenic | 40.0% | |
ATAGTCCCTTGTAAGCCAAT+AGG | - | chr8.1:30881880-30881899 | None:intergenic | 40.0% | |
ATCTCCTTTGACAGGTTCAA+GGG | + | chr8.1:30882024-30882043 | MS.gene76444:CDS | 40.0% | |
CAAAGACTCTACAACCAAAC+TGG | + | chr8.1:30881713-30881732 | MS.gene76444:CDS | 40.0% | |
CTCTACAACCAAACTGGAAA+TGG | + | chr8.1:30881719-30881738 | MS.gene76444:CDS | 40.0% | |
GAATCAAGAATCAGCTGAGT+TGG | + | chr8.1:30881928-30881947 | MS.gene76444:CDS | 40.0% | |
GACCATGTGATATAAAGTCG+TGG | + | chr8.1:30880448-30880467 | MS.gene76444:intron | 40.0% | |
GTTGATCTTGTTGCTCTTTC+TGG | + | chr8.1:30881209-30881228 | MS.gene76444:CDS | 40.0% | |
TATCTCCTTTGACAGGTTCA+AGG | + | chr8.1:30882023-30882042 | MS.gene76444:CDS | 40.0% | |
TCAGCACAAGAAACTGTATG+AGG | - | chr8.1:30880778-30880797 | None:intergenic | 40.0% | |
TGCCTCTGTCACAAGAAAAT+GGG | + | chr8.1:30880254-30880273 | MS.gene76444:CDS | 40.0% | |
TTCTTGTGACAGAGGCAAAA+AGG | - | chr8.1:30880251-30880270 | None:intergenic | 40.0% | |
TTGCCTCTGTCACAAGAAAA+TGG | + | chr8.1:30880253-30880272 | MS.gene76444:CDS | 40.0% | |
TTGTTGGTGTGACATAGTCT+AGG | - | chr8.1:30881832-30881851 | None:intergenic | 40.0% | |
! | CACCGCAACATCAAAGTTTT+TGG | - | chr8.1:30880479-30880498 | None:intergenic | 40.0% |
! | GAATTTGAGGCGCATGTATT+AGG | - | chr8.1:30881361-30881380 | None:intergenic | 40.0% |
! | TTTTGGTCACCACCAGATTT+TGG | - | chr8.1:30881800-30881819 | None:intergenic | 40.0% |
!! | CAAGAACCTATTGGCTTACA+AGG | + | chr8.1:30881871-30881890 | MS.gene76444:CDS | 40.0% |
!! | GTCTTCAATTTGAAGTGTCG+AGG | - | chr8.1:30880532-30880551 | None:intergenic | 40.0% |
!! | TGTCTGGAATGTGTTGTTTG+GGG | - | chr8.1:30881153-30881172 | None:intergenic | 40.0% |
AAGACGTGTCCAACATGTGT+CGG | + | chr8.1:30880547-30880566 | MS.gene76444:intron | 45.0% | |
CCTAACCGTAATTCAGCTAG+AGG | + | chr8.1:30880706-30880725 | MS.gene76444:CDS | 45.0% | |
CCTCTAGCTGAATTACGGTT+AGG | - | chr8.1:30880709-30880728 | None:intergenic | 45.0% | |
CCTTGTCAATGCTGTTGCAA+AGG | + | chr8.1:30880343-30880362 | MS.gene76444:CDS | 45.0% | |
CGCACTCAATGTCCAAAATC+TGG | + | chr8.1:30881785-30881804 | MS.gene76444:CDS | 45.0% | |
GCCACACTATAGGAAAGTCA+AGG | + | chr8.1:30881675-30881694 | MS.gene76444:CDS | 45.0% | |
GCCTCTGTCACAAGAAAATG+GGG | + | chr8.1:30880255-30880274 | MS.gene76444:CDS | 45.0% | |
GGCCACGACTTTATATCACA+TGG | - | chr8.1:30880453-30880472 | None:intergenic | 45.0% | |
GTAGAGTCTTTGCCTAAAGC+TGG | - | chr8.1:30881705-30881724 | None:intergenic | 45.0% | |
TATCTGACACCGACACATGT+TGG | - | chr8.1:30880559-30880578 | None:intergenic | 45.0% | |
TCACTAGGTGCAAGCTTAAG+TGG | + | chr8.1:30881107-30881126 | MS.gene76444:CDS | 45.0% | |
TCCACCAGCCTACACATAAA+AGG | - | chr8.1:30881054-30881073 | None:intergenic | 45.0% | |
TCTCCTTTGACAGGTTCAAG+GGG | + | chr8.1:30882025-30882044 | MS.gene76444:CDS | 45.0% | |
TGTAAAGGGAGCCACACTAT+AGG | + | chr8.1:30881665-30881684 | MS.gene76444:intron | 45.0% | |
TTTCCCCTTGAACCTGTCAA+AGG | - | chr8.1:30882031-30882050 | None:intergenic | 45.0% | |
! | ACCCCATTTTCTTGTGACAG+AGG | - | chr8.1:30880259-30880278 | None:intergenic | 45.0% |
! | CTTGCTTGCCATTTCCAGTT+TGG | - | chr8.1:30881730-30881749 | None:intergenic | 45.0% |
! | TCCTTTTATGTGTAGGCTGG+TGG | + | chr8.1:30881050-30881069 | MS.gene76444:intron | 45.0% |
!! | CCTTTGCAACAGCATTGACA+AGG | - | chr8.1:30880346-30880365 | None:intergenic | 45.0% |
!! | TGCAACAGCATTGACAAGGA+TGG | - | chr8.1:30880342-30880361 | None:intergenic | 45.0% |
AGTCAAGGTGCACCAGCTTT+AGG | + | chr8.1:30881690-30881709 | MS.gene76444:CDS | 50.0% | |
AGTGAGTCTCTTCTGCCTAG+AGG | - | chr8.1:30881092-30881111 | None:intergenic | 50.0% | |
CTAGGCAGAAGAGACTCACT+AGG | + | chr8.1:30881092-30881111 | MS.gene76444:CDS | 50.0% | |
TGGGGCTGGAATGTTGTTGT+TGG | - | chr8.1:30881135-30881154 | None:intergenic | 50.0% | |
!! | TGGAATGTGTTGTTTGGGGC+TGG | - | chr8.1:30881149-30881168 | None:intergenic | 50.0% |
! | GTAGGCTGGTGGACCAAACT+GGG | + | chr8.1:30881061-30881080 | MS.gene76444:intron | 55.0% |
! | TGTAGGCTGGTGGACCAAAC+TGG | + | chr8.1:30881060-30881079 | MS.gene76444:intron | 55.0% |
!! | CCAAACTGGGAAGTGCCTCT+AGG | + | chr8.1:30881074-30881093 | MS.gene76444:CDS | 55.0% |
!! | CCTAGAGGCACTTCCCAGTT+TGG | - | chr8.1:30881077-30881096 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 30880197 | 30882087 | 30880197 | ID=MS.gene76444 |
chr8.1 | mRNA | 30880197 | 30882087 | 30880197 | ID=MS.gene76444.t1;Parent=MS.gene76444 |
chr8.1 | exon | 30880197 | 30880421 | 30880197 | ID=MS.gene76444.t1.exon1;Parent=MS.gene76444.t1 |
chr8.1 | CDS | 30880197 | 30880421 | 30880197 | ID=cds.MS.gene76444.t1;Parent=MS.gene76444.t1 |
chr8.1 | exon | 30880643 | 30880834 | 30880643 | ID=MS.gene76444.t1.exon2;Parent=MS.gene76444.t1 |
chr8.1 | CDS | 30880643 | 30880834 | 30880643 | ID=cds.MS.gene76444.t1;Parent=MS.gene76444.t1 |
chr8.1 | exon | 30881065 | 30881230 | 30881065 | ID=MS.gene76444.t1.exon3;Parent=MS.gene76444.t1 |
chr8.1 | CDS | 30881065 | 30881230 | 30881065 | ID=cds.MS.gene76444.t1;Parent=MS.gene76444.t1 |
chr8.1 | exon | 30881672 | 30882087 | 30881672 | ID=MS.gene76444.t1.exon4;Parent=MS.gene76444.t1 |
chr8.1 | CDS | 30881672 | 30882087 | 30881672 | ID=cds.MS.gene76444.t1;Parent=MS.gene76444.t1 |
Gene Sequence |
Protein sequence |