AlfalfaGEDB | MS.gene81877

M. sativa cultivar XinJiangDaYe / MS.gene81877

KEGG: K03327
GO: GO:0003674 GO:0005215 GO:0005575 GO:0006810 GO:0008150 GO:0015291 GO:0015297 GO:0016020 GO:0022804 GO:0022857 GO:0042910 GO:0051179 GO:0051234 GO:0055085 GO:0110165
PFAM: PF01554.21

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene81877.t1	XP_013452945.1	95	397	20	0	1	397	84	480	2.80E-207	731.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene81877.t1	Q9FHB6	68.6	388	120	1	2	389	85	470	2.2e-152	540.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene81877.t1	A0A072UD23	95.0	397	20	0	1	397	84	480	2.0e-207	731.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049356	MS.gene81877	0.808711	2.71E-50	-1.69E-46
MS.gene050301	MS.gene81877	0.803821	2.90E-49	-1.69E-46
MS.gene050400	MS.gene81877	0.804881	1.75E-49	-1.69E-46
MS.gene050670	MS.gene81877	0.850179	2.01E-60	-1.69E-46
MS.gene050971	MS.gene81877	0.800675	1.29E-48	-1.69E-46
MS.gene05105	MS.gene81877	0.848	8.10E-60	-1.69E-46
MS.gene051255	MS.gene81877	0.800205	1.61E-48	-1.69E-46
MS.gene051360	MS.gene81877	0.820959	5.21E-53	-1.69E-46
MS.gene051387	MS.gene81877	0.817338	3.47E-52	-1.69E-46
MS.gene051525	MS.gene81877	0.852034	6.01E-61	-1.69E-46
MS.gene051588	MS.gene81877	0.812971	3.24E-51	-1.69E-46
MS.gene051605	MS.gene81877	0.81688	4.40E-52	-1.69E-46
MS.gene052011	MS.gene81877	-0.808849	2.53E-50	-1.69E-46
MS.gene052188	MS.gene81877	0.836957	6.90E-57	-1.69E-46
MS.gene052253	MS.gene81877	0.838276	3.17E-57	-1.69E-46
MS.gene052310	MS.gene81877	0.818053	2.40E-52	-1.69E-46
MS.gene052340	MS.gene81877	0.805512	1.29E-49	-1.69E-46
MS.gene052414	MS.gene81877	0.813373	2.64E-51	-1.69E-46
MS.gene052421	MS.gene81877	0.846426	2.19E-59	-1.69E-46
MS.gene052485	MS.gene81877	0.82324	1.54E-53	-1.69E-46
MS.gene052999	MS.gene81877	0.831496	1.62E-55	-1.69E-46
MS.gene053169	MS.gene81877	0.851949	6.36E-61	-1.69E-46
MS.gene05335	MS.gene81877	0.88709	1.94E-72	-1.69E-46
MS.gene053758	MS.gene81877	0.84319	1.63E-58	-1.69E-46
MS.gene053813	MS.gene81877	0.819261	1.27E-52	-1.69E-46
MS.gene053912	MS.gene81877	0.801603	8.33E-49	-1.69E-46
MS.gene054010	MS.gene81877	0.862685	4.25E-64	-1.69E-46
MS.gene054011	MS.gene81877	0.834129	3.58E-56	-1.69E-46
MS.gene054012	MS.gene81877	0.846214	2.50E-59	-1.69E-46
MS.gene054013	MS.gene81877	0.846797	1.73E-59	-1.69E-46
MS.gene054183	MS.gene81877	0.82687	2.14E-54	-1.69E-46
MS.gene054349	MS.gene81877	0.802501	5.44E-49	-1.69E-46
MS.gene054556	MS.gene81877	0.860074	2.66E-63	-1.69E-46
MS.gene05505	MS.gene81877	0.806066	9.85E-50	-1.69E-46
MS.gene055116	MS.gene81877	0.838354	3.02E-57	-1.69E-46
MS.gene055369	MS.gene81877	0.801993	6.93E-49	-1.69E-46
MS.gene055604	MS.gene81877	0.813726	2.21E-51	-1.69E-46
MS.gene055741	MS.gene81877	0.823825	1.12E-53	-1.69E-46
MS.gene055744	MS.gene81877	0.83071	2.52E-55	-1.69E-46
MS.gene055909	MS.gene81877	0.835225	1.90E-56	-1.69E-46
MS.gene055911	MS.gene81877	0.841546	4.45E-58	-1.69E-46
MS.gene056191	MS.gene81877	0.82063	6.20E-53	-1.69E-46
MS.gene056422	MS.gene81877	0.811179	7.97E-51	-1.69E-46
MS.gene056511	MS.gene81877	0.822063	2.89E-53	-1.69E-46
MS.gene056514	MS.gene81877	0.810419	1.16E-50	-1.69E-46
MS.gene056902	MS.gene81877	0.823852	1.11E-53	-1.69E-46
MS.gene057019	MS.gene81877	0.800992	1.11E-48	-1.69E-46
MS.gene057476	MS.gene81877	0.812591	3.93E-51	-1.69E-46
MS.gene057749	MS.gene81877	0.833838	4.24E-56	-1.69E-46
MS.gene057823	MS.gene81877	0.835152	1.98E-56	-1.69E-46
MS.gene057825	MS.gene81877	0.830922	2.23E-55	-1.69E-46
MS.gene058007	MS.gene81877	0.851928	6.45E-61	-1.69E-46
MS.gene058376	MS.gene81877	0.820038	8.47E-53	-1.69E-46
MS.gene058444	MS.gene81877	0.822416	2.40E-53	-1.69E-46
MS.gene058700	MS.gene81877	0.864773	9.55E-65	-1.69E-46
MS.gene05886	MS.gene81877	0.804602	2.00E-49	-1.69E-46
MS.gene058928	MS.gene81877	0.813555	2.41E-51	-1.69E-46
MS.gene058995	MS.gene81877	0.85815	1.00E-62	-1.69E-46
MS.gene05907	MS.gene81877	0.824385	8.31E-54	-1.69E-46
MS.gene059082	MS.gene81877	0.814044	1.88E-51	-1.69E-46
MS.gene059141	MS.gene81877	0.817192	3.75E-52	-1.69E-46
MS.gene059294	MS.gene81877	0.832033	1.19E-55	-1.69E-46
MS.gene059420	MS.gene81877	0.844588	6.89E-59	-1.69E-46
MS.gene059462	MS.gene81877	0.806378	8.47E-50	-1.69E-46
MS.gene059674	MS.gene81877	0.803677	3.11E-49	-1.69E-46
MS.gene059676	MS.gene81877	0.800895	1.16E-48	-1.69E-46
MS.gene059688	MS.gene81877	0.853509	2.28E-61	-1.69E-46
MS.gene059692	MS.gene81877	0.828417	9.09E-55	-1.69E-46
MS.gene059695	MS.gene81877	0.832868	7.40E-56	-1.69E-46
MS.gene059711	MS.gene81877	0.824064	9.88E-54	-1.69E-46
MS.gene059807	MS.gene81877	0.847987	8.17E-60	-1.69E-46
MS.gene059876	MS.gene81877	0.800477	1.42E-48	-1.69E-46
MS.gene059933	MS.gene81877	0.802843	4.63E-49	-1.69E-46
MS.gene059974	MS.gene81877	0.802313	5.95E-49	-1.69E-46
MS.gene060372	MS.gene81877	0.843695	1.20E-58	-1.69E-46
MS.gene060401	MS.gene81877	0.813998	1.93E-51	-1.69E-46
MS.gene060403	MS.gene81877	0.822092	2.85E-53	-1.69E-46
MS.gene060837	MS.gene81877	0.847393	1.19E-59	-1.69E-46
MS.gene061154	MS.gene81877	0.831088	2.04E-55	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene81877	MS.gene59999	PPI
MS.gene81877	MS.gene029501	PPI
MS.gene81877	MS.gene73453	PPI
MS.gene81877	MS.gene029498	PPI
MS.gene81877	MS.gene05341	PPI
MS.gene81877	MS.gene55012	PPI
MS.gene81877	MS.gene82778	PPI
MS.gene71749	MS.gene81877	PPI
MS.gene81877	MS.gene59995	PPI
MS.gene81877	MS.gene042352	PPI
MS.gene81877	MS.gene59997	PPI
MS.gene81877	MS.gene71750	PPI
MS.gene032679	MS.gene81877	PPI
MS.gene81877	MS.gene05336	PPI
MS.gene81877	MS.gene020465	PPI
MS.gene81877	MS.gene053097	PPI
MS.gene81877	MS.gene024208	PPI
MS.gene81877	MS.gene81884	PPI
MS.gene81877	MS.gene73451	PPI
MS.gene81877	MS.gene05335	PPI
MS.gene81877	MS.gene042358	PPI
MS.gene81877	MS.gene042353	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene81877.t1	MTR_6g081410	94.962	397	20	0	1	397	84	480	0.0	746
MS.gene81877.t1	MTR_6g081780	88.413	397	46	0	1	397	84	480	0.0	701
MS.gene81877.t1	MTR_6g066380	84.131	397	63	0	1	397	86	482	0.0	673
MS.gene81877.t1	MTR_6g081810	81.108	397	47	1	1	397	86	454	0.0	631
MS.gene81877.t1	MTR_6g081400	60.354	396	155	1	2	397	76	469	2.22e-174	495
MS.gene81877.t1	MTR_6g081390	62.944	394	144	1	4	397	75	466	5.92e-173	491
MS.gene81877.t1	MTR_1g108810	60.263	380	149	1	1	380	93	470	2.72e-168	480
MS.gene81877.t1	MTR_8g106670	60.668	389	151	1	1	389	71	457	5.31e-167	476
MS.gene81877.t1	MTR_6g081300	57.106	387	164	1	1	387	69	453	2.47e-156	449
MS.gene81877.t1	MTR_6g081240	57.672	378	158	1	1	378	69	444	3.16e-154	443
MS.gene81877.t1	MTR_6g081310	57.431	397	156	2	1	386	56	450	1.01e-151	437
MS.gene81877.t1	MTR_1g108840	51.804	388	185	1	1	388	100	485	1.14e-139	407
MS.gene81877.t1	MTR_6g004220	50.518	386	189	1	1	386	83	466	2.05e-138	404
MS.gene81877.t1	MTR_6g004220	50.529	378	185	1	1	378	90	465	2.24e-134	394
MS.gene81877.t1	MTR_1g108990	51.804	388	185	1	1	388	84	469	6.81e-134	392
MS.gene81877.t1	MTR_7g082810	47.859	397	205	1	1	397	79	473	1.76e-130	384
MS.gene81877.t1	MTR_7g082800	47.668	386	200	1	1	386	1	384	2.51e-127	372
MS.gene81877.t1	MTR_1g109060	49.614	389	194	1	1	389	83	469	2.76e-127	375
MS.gene81877.t1	MTR_1g109060	50.000	378	187	1	1	378	83	458	1.15e-123	366
MS.gene81877.t1	MTR_2g088400	43.041	388	219	1	1	388	111	496	3.02e-110	333
MS.gene81877.t1	MTR_4g048000	42.065	397	227	2	1	396	123	517	4.04e-106	322
MS.gene81877.t1	MTR_6g004220	50.645	310	151	1	1	310	90	397	1.09e-105	319
MS.gene81877.t1	MTR_2g022980	42.199	391	221	2	1	388	107	495	3.55e-105	319
MS.gene81877.t1	MTR_2g078930	41.795	390	218	3	1	385	102	487	1.88e-100	307
MS.gene81877.t1	MTR_2g078960	42.175	377	216	1	1	377	92	466	1.73e-99	304
MS.gene81877.t1	MTR_2g079020	40.201	398	229	3	1	393	96	489	2.23e-96	297
MS.gene81877.t1	MTR_2g088400	43.266	349	196	1	1	349	111	457	6.97e-96	294
MS.gene81877.t1	MTR_2g078970	38.889	396	237	2	1	393	90	483	9.35e-96	295
MS.gene81877.t1	MTR_8g063590	41.500	400	227	4	1	397	112	507	1.71e-91	285
MS.gene81877.t1	MTR_5g033100	40.206	388	229	2	1	388	115	499	5.95e-89	278
MS.gene81877.t1	MTR_1g021740	39.691	388	231	2	1	388	94	478	1.27e-88	276
MS.gene81877.t1	MTR_8g069470	39.119	386	232	2	1	386	109	491	4.37e-87	273
MS.gene81877.t1	MTR_5g090290	38.734	395	240	1	1	395	105	497	1.69e-85	271
MS.gene81877.t1	MTR_7g087410	37.563	394	243	2	1	394	1	391	4.67e-85	265
MS.gene81877.t1	MTR_7g087410	37.563	394	243	2	1	394	90	480	4.36e-84	265
MS.gene81877.t1	MTR_5g067460	35.696	395	252	1	1	395	114	506	6.72e-84	266
MS.gene81877.t1	MTR_5g032720	37.594	399	238	4	1	391	95	490	9.75e-84	264
MS.gene81877.t1	MTR_7g087430	38.265	392	231	4	1	388	1	385	1.17e-82	258
MS.gene81877.t1	MTR_1g100180	37.887	388	237	3	1	388	102	485	3.05e-80	255
MS.gene81877.t1	MTR_5g032750	39.164	383	229	3	1	382	95	474	3.64e-79	252
MS.gene81877.t1	MTR_7g087400	34.772	394	253	2	1	394	89	478	5.88e-79	251
MS.gene81877.t1	MTR_3g111020	36.294	394	243	3	1	391	110	498	7.24e-78	250
MS.gene81877.t1	MTR_5g010830	34.109	387	247	3	1	384	124	505	1.10e-76	247
MS.gene81877.t1	MTR_1g101500	32.987	385	250	3	1	382	123	502	2.83e-76	246
MS.gene81877.t1	MTR_6g004220	50.000	228	112	1	1	228	90	315	4.79e-75	236
MS.gene81877.t1	MTR_6g047610	34.625	387	249	2	1	387	89	471	9.44e-74	238
MS.gene81877.t1	MTR_6g043810	34.586	399	234	3	1	382	82	470	1.01e-73	238
MS.gene81877.t1	MTR_6g043810	34.586	399	234	3	1	382	92	480	1.29e-73	238
MS.gene81877.t1	MTR_0039s0080	32.494	397	260	4	1	394	97	488	2.36e-73	238
MS.gene81877.t1	MTR_6g047640	36.176	387	243	2	1	387	90	472	2.90e-73	236
MS.gene81877.t1	MTR_7g087370	34.278	388	222	3	1	388	89	443	4.35e-72	233
MS.gene81877.t1	MTR_6g047640	34.109	387	232	3	1	387	90	453	1.94e-71	231
MS.gene81877.t1	MTR_2g078990	37.261	314	192	2	85	395	3	314	2.26e-70	224
MS.gene81877.t1	MTR_3g099700	35.279	394	251	3	1	393	105	495	6.26e-70	228
MS.gene81877.t1	MTR_3g099720	34.010	394	257	2	1	394	100	490	8.04e-69	225
MS.gene81877.t1	MTR_6g027200	35.516	397	246	5	1	394	96	485	2.16e-68	224
MS.gene81877.t1	MTR_5g087930	35.264	397	232	6	1	395	85	458	2.72e-68	223
MS.gene81877.t1	MTR_6g047590	34.606	393	253	2	1	393	89	477	7.24e-65	214
MS.gene81877.t1	MTR_4g027920	31.818	396	266	4	4	397	218	611	9.53e-65	218
MS.gene81877.t1	MTR_6g027190	34.447	389	249	3	1	388	84	467	1.05e-64	214
MS.gene81877.t1	MTR_6g088805	32.481	391	254	3	4	389	89	474	2.07e-64	214
MS.gene81877.t1	MTR_8g102430	32.982	379	232	3	4	382	85	441	1.54e-62	207
MS.gene81877.t1	MTR_2g435930	28.000	400	274	2	1	386	78	477	4.32e-54	187
MS.gene81877.t1	MTR_5g090280	30.569	422	257	4	1	395	1	413	1.96e-53	183
MS.gene81877.t1	MTR_5g011540	31.980	394	265	3	1	393	102	493	1.22e-47	170
MS.gene81877.t1	MTR_2g079030	39.720	214	126	1	183	393	319	532	3.25e-47	169
MS.gene81877.t1	MTR_3g087820	53.333	75	35	0	59	133	48	122	1.11e-21	90.1
MS.gene81877.t1	MTR_7g007430	42.667	75	42	1	230	304	16	89	9.18e-11	60.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene81877.t1	AT5G52450	67.513	394	126	1	2	395	85	476	0.0	546
MS.gene81877.t1	AT2G34360	63.753	389	131	4	2	389	86	465	0.0	516
MS.gene81877.t1	AT1G73700	62.785	395	145	1	2	396	83	475	8.71e-176	499
MS.gene81877.t1	AT2G34360	54.897	388	125	2	2	389	86	423	4.95e-153	439
MS.gene81877.t1	AT1G71140	50.259	386	190	1	1	386	84	467	3.46e-135	396
MS.gene81877.t1	AT1G15170	47.704	392	203	1	1	392	92	481	8.33e-131	384
MS.gene81877.t1	AT1G15160	46.096	397	209	2	1	394	89	483	2.68e-127	375
MS.gene81877.t1	AT1G15150	45.088	397	213	2	1	394	89	483	1.04e-125	372
MS.gene81877.t1	AT1G15180	48.724	392	199	1	1	392	93	482	6.77e-125	369
MS.gene81877.t1	AT2G04100	47.668	386	200	2	1	386	88	471	1.59e-122	363
MS.gene81877.t1	AT1G15170	47.253	364	190	1	29	392	1	362	1.55e-120	354
MS.gene81877.t1	AT1G66760	46.134	388	207	1	1	388	86	471	5.82e-120	357
MS.gene81877.t1	AT2G04100	47.619	378	196	2	1	378	88	463	4.69e-119	354
MS.gene81877.t1	AT2G04090	46.373	386	205	2	1	386	88	471	1.30e-118	353
MS.gene81877.t1	AT2G04040	46.193	394	207	2	1	394	85	473	1.79e-118	353
MS.gene81877.t1	AT2G04070	46.373	386	205	1	1	386	85	468	5.96e-118	351
MS.gene81877.t1	AT2G04080	45.685	394	209	3	1	394	85	473	7.40e-118	351
MS.gene81877.t1	AT2G04050	47.409	386	201	1	1	386	85	468	3.30e-117	350
MS.gene81877.t1	AT1G66760	46.296	378	201	1	1	378	86	461	4.55e-117	349
MS.gene81877.t1	AT1G15150	44.444	369	200	2	29	394	1	367	1.71e-115	342
MS.gene81877.t1	AT2G04080	45.526	380	205	2	1	380	85	462	2.54e-114	342
MS.gene81877.t1	AT1G66780	43.511	393	220	1	1	393	93	483	3.75e-112	337
MS.gene81877.t1	AT1G64820	42.746	386	219	1	1	386	87	470	7.23e-109	329
MS.gene81877.t1	AT1G61890	40.464	388	229	1	1	388	105	490	2.92e-107	325
MS.gene81877.t1	AT1G11670	39.394	396	238	1	1	396	108	501	5.08e-106	322
MS.gene81877.t1	AT3G21690	40.979	388	227	1	1	388	110	495	2.11e-104	318
MS.gene81877.t1	AT1G61890	40.526	380	224	1	1	380	105	482	4.05e-104	317
MS.gene81877.t1	AT1G66760	47.289	332	173	1	47	378	4	333	4.80e-102	306
MS.gene81877.t1	AT3G23550	42.440	377	215	1	1	377	89	463	9.71e-102	310
MS.gene81877.t1	AT3G23560	42.706	377	214	1	1	377	97	471	5.63e-101	308
MS.gene81877.t1	AT4G21910	40.310	387	229	1	1	387	112	496	1.33e-99	305
MS.gene81877.t1	AT4G21910	40.310	387	229	1	1	387	112	496	1.33e-99	305
MS.gene81877.t1	AT4G21903	39.494	395	237	1	1	395	1	393	1.43e-99	301
MS.gene81877.t1	AT4G21910	40.310	387	229	1	1	387	114	498	2.81e-99	305
MS.gene81877.t1	AT4G21910	40.310	387	229	1	1	387	114	498	2.81e-99	305
MS.gene81877.t1	AT4G21903	39.793	387	231	1	1	387	110	494	6.32e-98	301
MS.gene81877.t1	AT4G21903	39.947	378	225	1	1	378	110	485	4.68e-95	294
MS.gene81877.t1	AT3G59030	39.949	393	230	3	1	391	109	497	3.14e-93	289
MS.gene81877.t1	AT1G61890	40.115	349	207	1	1	349	105	451	9.06e-91	281
MS.gene81877.t1	AT1G66760	45.806	310	166	1	1	310	86	393	2.54e-89	275
MS.gene81877.t1	AT3G26590	37.113	388	241	2	1	388	1	385	6.64e-89	274
MS.gene81877.t1	AT3G26590	37.113	388	241	2	1	388	103	487	1.05e-87	275
MS.gene81877.t1	AT1G15180	46.996	283	148	1	29	311	1	281	2.61e-86	268
MS.gene81877.t1	AT1G47530	38.402	388	236	2	1	388	1	385	9.00e-86	266
MS.gene81877.t1	AT5G38030	36.598	388	243	2	1	388	103	487	1.77e-85	269
MS.gene81877.t1	AT1G12950	36.856	388	242	2	1	388	125	509	5.24e-85	268
MS.gene81877.t1	AT1G47530	38.402	388	236	2	1	388	93	477	1.50e-84	266
MS.gene81877.t1	AT1G23300	39.175	388	233	2	1	388	102	486	3.87e-83	263
MS.gene81877.t1	AT5G44050	37.018	389	241	3	1	388	98	483	2.10e-81	258
MS.gene81877.t1	AT1G33090	38.481	395	238	4	1	394	94	484	6.14e-80	254
MS.gene81877.t1	AT1G58340	36.693	387	237	3	1	384	116	497	6.16e-79	253
MS.gene81877.t1	AT1G33100	37.056	394	245	2	1	394	91	481	3.41e-78	249
MS.gene81877.t1	AT5G65380	38.046	389	237	3	1	388	95	480	4.64e-78	249
MS.gene81877.t1	AT4G00350	36.082	388	244	2	1	388	146	529	1.82e-77	249
MS.gene81877.t1	AT3G23560	42.581	310	176	1	1	310	97	404	5.14e-77	244
MS.gene81877.t1	AT2G38510	33.763	388	248	5	1	384	64	446	1.76e-75	243
MS.gene81877.t1	AT1G33110	36.294	394	248	3	1	394	94	484	1.81e-75	243
MS.gene81877.t1	AT5G10420	36.203	395	248	3	1	394	96	487	1.47e-74	240
MS.gene81877.t1	AT1G33080	36.709	395	245	4	1	394	94	484	2.27e-74	240
MS.gene81877.t1	AT1G33080	37.240	384	236	4	1	383	94	473	6.41e-73	236
MS.gene81877.t1	AT4G23030	35.677	384	239	3	4	384	94	472	1.91e-72	235
MS.gene81877.t1	AT4G29140	34.031	382	250	1	1	382	114	493	7.64e-70	229
MS.gene81877.t1	AT1G71870	33.915	401	243	4	1	382	82	479	2.97e-69	227
MS.gene81877.t1	AT5G52050	33.594	384	249	3	4	382	96	478	3.86e-69	226
MS.gene81877.t1	AT3G59030	40.000	310	184	1	1	310	109	416	1.09e-67	220
MS.gene81877.t1	AT3G03620	35.204	392	241	7	1	387	95	478	3.84e-67	221
MS.gene81877.t1	AT3G03620	35.204	392	241	7	1	387	95	478	3.84e-67	221
MS.gene81877.t1	AT4G25640	36.181	398	242	4	1	394	92	481	7.36e-67	220
MS.gene81877.t1	AT4G25640	36.181	398	242	4	1	394	92	481	1.16e-66	220
MS.gene81877.t1	AT5G17700	35.115	393	242	7	1	388	92	476	2.19e-66	219
MS.gene81877.t1	AT5G17700	35.115	393	242	7	1	388	92	476	2.19e-66	219
MS.gene81877.t1	AT5G49130	31.477	413	259	5	1	395	84	490	4.31e-65	216
MS.gene81877.t1	AT5G19700	32.494	397	261	2	1	392	94	488	5.90e-62	207
MS.gene81877.t1	AT4G25640	36.752	351	210	4	1	347	92	434	5.04e-59	199
MS.gene81877.t1	AT4G22790	30.749	387	258	5	1	382	88	469	3.54e-51	179
MS.gene81877.t1	AT1G33110	35.370	311	196	4	1	310	94	400	4.57e-49	171
MS.gene81877.t1	AT5G17700	33.968	315	195	7	1	310	92	398	1.21e-42	154
MS.gene81877.t1	AT2G04066	48.361	122	63	0	265	386	42	163	8.36e-36	129

Find 91 sgRNAs with CRISPR-Local

Find 165 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAATTAATGGTTCTCCTTTC+TGG	0.099766	6.4:-54664990	MS.gene81877:CDS
TTATACTAGTTCGTAATTTA+TGG	0.157282	6.4:-54664481	MS.gene81877:CDS
GGAATGCAAGCTGTTCTTTC+AGG	0.198269	6.4:-54664374	MS.gene81877:intron
CCATTCCCCTCGCAATTATT+TGG	0.213530	6.4:-54665597	MS.gene81877:CDS
ATGGCAAGCTTCAGGAAAAT+TGG	0.241777	6.4:+54665202	None:intergenic
TCATCCACTGGCTGCGCGTT+TGG	0.282620	6.4:-54664561	MS.gene81877:CDS
GATGTTTCCAACTTTGGATT+TGG	0.287173	6.4:+54664960	None:intergenic
CAGTAGATATTTCATGATCT+TGG	0.298876	6.4:+54665542	None:intergenic
CATTCCCCTCGCAATTATTT+GGG	0.315249	6.4:-54665596	MS.gene81877:CDS
AATGTGGTCATTTGAATTAA+TGG	0.315453	6.4:-54665003	MS.gene81877:CDS
CTTGGATCATATTATTTAGT+TGG	0.330742	6.4:-54663356	MS.gene81877:CDS
AGCACAGATGTTTCCAACTT+TGG	0.335573	6.4:+54664954	None:intergenic
TCTTCCTCTATGTTGGATAA+TGG	0.343949	6.4:-54665383	MS.gene81877:CDS
ATTGGCGCCTTTGTCAATCT+TGG	0.348734	6.4:-54663374	MS.gene81877:CDS
AAACATCTGTGCTTTCTATC+TGG	0.352029	6.4:-54664944	MS.gene81877:intron
CTGAAGGAATGGCAAGCTTC+AGG	0.354381	6.4:+54665194	None:intergenic
TATACTAGTTCGTAATTTAT+GGG	0.354480	6.4:-54664480	MS.gene81877:CDS
GGATGTGGTTGGCAGAAAAT+TGG	0.357552	6.4:-54663392	MS.gene81877:CDS
TTTAACATAGAGTGCGAGTA+TGG	0.357733	6.4:+54665291	None:intergenic
TGGCAGCTATGCTAAGTTAA+TGG	0.362866	6.4:-54665515	MS.gene81877:CDS
TATAATATAGGGGCTGTGGC+TGG	0.365205	6.4:-54663213	MS.gene81877:intron
TCCATCTAGTAAGTGGGATA+TGG	0.378882	6.4:+54664394	None:intergenic
TTGTCCACATAATGTGTCTA+AGG	0.380227	6.4:+54665693	None:intergenic
GTAGAAGACCGTAAGCAAAA+AGG	0.395768	6.4:+54665485	None:intergenic
TTGGATCATATTATTTAGTT+GGG	0.395886	6.4:-54663355	MS.gene81877:CDS
GCCATATCCCACTTACTAGA+TGG	0.402546	6.4:-54664395	MS.gene81877:CDS
TGCCATTCCTTCAGCTGTAA+TGG	0.404862	6.4:-54665185	MS.gene81877:CDS
ATAATATAGGGGCTGTGGCT+GGG	0.407197	6.4:-54663212	MS.gene81877:intron
ATGGTATACAAGTCTGGATT+AGG	0.409491	6.4:-54665364	MS.gene81877:CDS
TAATATAGGGGCTGTGGCTG+GGG	0.415777	6.4:-54663211	MS.gene81877:intron
TCATTACAATACGCACTGAT+TGG	0.417373	6.4:-54663148	MS.gene81877:CDS
TAAATACAACTGCAGCTGTT+TGG	0.421440	6.4:-54664796	MS.gene81877:CDS
ATGATCCCCTTCGGACTTAG+TGG	0.428230	6.4:-54664773	MS.gene81877:CDS
TCCAATGATGTTTAGCTCCT+CGG	0.431966	6.4:-54665422	MS.gene81877:CDS
TACTTCATCTTCCTCTATGT+TGG	0.435862	6.4:-54665390	MS.gene81877:CDS
GTTCAGCGCAAGTGCTTCCT+TGG	0.439233	6.4:+54665231	None:intergenic
CTCCTTCATGTAAGAAAACA+TGG	0.439623	6.4:-54665264	MS.gene81877:CDS
TAGCAAATTCAATATCGTAC+TGG	0.441020	6.4:-54665324	MS.gene81877:CDS
ACCGAGGAGCTAAACATCAT+TGG	0.444954	6.4:+54665421	None:intergenic
GCAAAGCAGTACCGCATGTC+AGG	0.449733	6.4:-54665661	MS.gene81877:CDS
GACTAAAATGCTCTCAATAA+CGG	0.450216	6.4:+54664514	None:intergenic
TGGCAAGCTTCAGGAAAATT+GGG	0.459148	6.4:+54665203	None:intergenic
AAGTGGGATATGGCAAGAAT+TGG	0.460697	6.4:+54664404	None:intergenic
TCTTCTTCCAAATCCAAAGT+TGG	0.461674	6.4:-54664967	MS.gene81877:CDS
TTCCTTCAGCTGTAATGGTC+TGG	0.465617	6.4:-54665180	MS.gene81877:intron
TGGATAATGGTATACAAGTC+TGG	0.467303	6.4:-54665370	MS.gene81877:CDS
CCAAATAATTGCGAGGGGAA+TGG	0.471675	6.4:+54665597	None:intergenic
ACATTATGTGGACAATCATA+TGG	0.474719	6.4:-54665685	MS.gene81877:CDS
ATTCGTGTTTCGAATGAACT+TGG	0.485317	6.4:-54664590	MS.gene81877:CDS
CATGAAATATCTACTGAAGC+TGG	0.490884	6.4:-54665535	MS.gene81877:CDS
CATTACAATACGCACTGATT+GGG	0.499725	6.4:-54663147	MS.gene81877:CDS
CTTGCATTCCATCTAGTAAG+TGG	0.503895	6.4:+54664387	None:intergenic
GCTGTTTGGATGATCCCCTT+CGG	0.508428	6.4:-54664782	MS.gene81877:CDS
TCGGACTTAGTGGAGCTGTA+AGG	0.514444	6.4:-54664763	MS.gene81877:intron
AAAGCGAATACAATGGCTGC+TGG	0.518120	6.4:+54663329	None:intergenic
TTGGCCAAGTAAAATGAGAA+TGG	0.519826	6.4:+54665561	None:intergenic
TATTTATAATATAGGGGCTG+TGG	0.526557	6.4:-54663217	MS.gene81877:intron
GACCATTACAGCTGAAGGAA+TGG	0.532522	6.4:+54665183	None:intergenic
TGTACTACATATTGGAGGCA+AGG	0.534836	6.4:-54663306	MS.gene81877:intron
GTACGATATTGAATTTGCTA+TGG	0.543345	6.4:+54665327	None:intergenic
CGATGAGCAGCTTGGAAATG+TGG	0.543480	6.4:-54665019	MS.gene81877:intron
ACGCACTGATTGGGAGAAAG+AGG	0.546750	6.4:-54663138	MS.gene81877:intron
TCATGTAAGAAAACATGGAA+TGG	0.547867	6.4:-54665259	MS.gene81877:CDS
ACTTGGTGCTGGTCATCCAC+TGG	0.548900	6.4:-54664573	MS.gene81877:CDS
GTTTCGAATGAACTTGGTGC+TGG	0.552325	6.4:-54664584	MS.gene81877:CDS
AGCAAATTCAATATCGTACT+GGG	0.552376	6.4:-54665323	MS.gene81877:CDS
TCAGGCACTGCTAGAGGATG+TGG	0.553165	6.4:-54663407	MS.gene81877:intron
TACCAGACCATTACAGCTGA+AGG	0.567961	6.4:+54665178	None:intergenic
ATACTAGTTCGTAATTTATG+GGG	0.573105	6.4:-54664479	MS.gene81877:CDS
AAGTCTGGATTAGGTAGCAG+AGG	0.573228	6.4:-54665355	MS.gene81877:CDS
AGTGCCTTAGACACATTATG+TGG	0.575750	6.4:-54665697	MS.gene81877:CDS
ACTGCCAAACGCGCAGCCAG+TGG	0.585917	6.4:+54664557	None:intergenic
TACAGCTCCACTAAGTCCGA+AGG	0.592565	6.4:+54664766	None:intergenic
TATACCATTATCCAACATAG+AGG	0.595522	6.4:+54665379	None:intergenic
TTATAGCAATGAAGAAGAAG+TGG	0.596051	6.4:-54664450	MS.gene81877:CDS
TATGATTCAGGCACTGCTAG+AGG	0.605344	6.4:-54663413	MS.gene81877:intron
ACAGCTCCACTAAGTCCGAA+GGG	0.616463	6.4:+54664767	None:intergenic
TTGCATTCCATCTAGTAAGT+GGG	0.618025	6.4:+54664388	None:intergenic
GTTTGCCCAAATAATTGCGA+GGG	0.621962	6.4:+54665591	None:intergenic
ATATGATCCAAGATTGACAA+AGG	0.625903	6.4:+54663367	None:intergenic
GATTTGGAAGAAGACCAGAA+AGG	0.631676	6.4:+54664976	None:intergenic
ATGAAGTAATGTTGTAACCG+AGG	0.644303	6.4:+54665405	None:intergenic
TGTTTGCCCAAATAATTGCG+AGG	0.644478	6.4:+54665590	None:intergenic
GACGATCATGAGAATGAACA+TGG	0.663742	6.4:+54665621	None:intergenic
GCACTGCTAGAGGATGTGGT+TGG	0.664505	6.4:-54663403	MS.gene81877:CDS
TTTGCCCAAATAATTGCGAG+GGG	0.674256	6.4:+54665592	None:intergenic
TAGTACAAAAGCGAATACAA+TGG	0.675143	6.4:+54663322	None:intergenic
GACAAAGCGCTTGAACAACG+AGG	0.679901	6.4:+54663177	None:intergenic
CAGCTCCACTAAGTCCGAAG+GGG	0.684598	6.4:+54664768	None:intergenic
ACAAAGCGCTTGAACAACGA+GGG	0.691240	6.4:+54663178	None:intergenic
GCATGTGTATGCCTGACATG+CGG	0.723702	6.4:+54665650	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TAATAAATATTTATAATATA+GGG	-	chr6.4:54665464-54665483	MS.gene81877:CDS	0.0%
!!	ATGAATATTTATTTAATGAA+AGG	+	chr6.4:54665608-54665627	None:intergenic	10.0%
!!	TAAAATTCTATTATAATATG+TGG	+	chr6.4:54663562-54663581	None:intergenic	10.0%
!!	TATTATAAATATTTATTAGC+AGG	+	chr6.4:54665462-54665481	None:intergenic	10.0%
!!	TTTAATACACAATTATATAT+TGG	+	chr6.4:54664699-54664718	None:intergenic	10.0%
!!	AAAATAAAATCAAAAGTTGT+TGG	+	chr6.4:54664349-54664368	None:intergenic	15.0%
!!	CTAATATATATCATACAAAA+AGG	-	chr6.4:54664500-54664519	MS.gene81877:CDS	15.0%
!!	TAATTGTGTATTAAATACTA+TGG	-	chr6.4:54664704-54664723	MS.gene81877:intron	15.0%
!!!	AAATAATTTGAAGTATAGTT+TGG	-	chr6.4:54664563-54664582	MS.gene81877:CDS	15.0%
!!!	TTATTTTGTTCATATGATTT+CGG	-	chr6.4:54664362-54664381	MS.gene81877:intron	15.0%
!!	AAAATCGCTATCATAATATT+TGG	-	chr6.4:54665431-54665450	MS.gene81877:CDS	20.0%
!!	AAGAAAAAAAACTCAAATCA+AGG	+	chr6.4:54664935-54664954	None:intergenic	20.0%
!!	GAGATCGAAAAAAATAAAAT+AGG	-	chr6.4:54665152-54665171	MS.gene81877:intron	20.0%
!!	TAAAAAAGAGAAAAAAGCTT+TGG	+	chr6.4:54663997-54664016	None:intergenic	20.0%
!!	TAGGATTAAGTTAAATAGTA+AGG	+	chr6.4:54663968-54663987	None:intergenic	20.0%
!!	TATACTAGTTCGTAATTTAT+GGG	-	chr6.4:54664208-54664227	MS.gene81877:intron	20.0%
!!	TTATACTAGTTCGTAATTTA+TGG	-	chr6.4:54664207-54664226	MS.gene81877:intron	20.0%
!!	TTGGATCATATTATTTAGTT+GGG	-	chr6.4:54665333-54665352	MS.gene81877:CDS	20.0%
!!!	ATACAATATTTTGAGTTTGT+AGG	+	chr6.4:54663245-54663264	None:intergenic	20.0%
!!!	ATCTGAGTTTTATAGAAAAA+AGG	+	chr6.4:54665008-54665027	None:intergenic	20.0%
!!!	ATTTTTCTGTCTCTAAATTT+CGG	-	chr6.4:54665229-54665248	MS.gene81877:CDS	20.0%
!!!	CATTTTGTTTGGAAATAAAT+CGG	-	chr6.4:54664596-54664615	MS.gene81877:intron	20.0%
!!!	GTTATATGAATCATTTTGTT+TGG	-	chr6.4:54664585-54664604	MS.gene81877:CDS	20.0%
!	AAAATCAAAGCTTCAAATAG+TGG	+	chr6.4:54664676-54664695	None:intergenic	25.0%
!	AATGTGGTCATTTGAATTAA+TGG	-	chr6.4:54663685-54663704	MS.gene81877:intron	25.0%
!	ATAAAATAGGTCATCAAAGT+TGG	-	chr6.4:54665165-54665184	MS.gene81877:intron	25.0%
!	ATACTAGTTCGTAATTTATG+GGG	-	chr6.4:54664209-54664228	MS.gene81877:intron	25.0%
!	CTTGGATCATATTATTTAGT+TGG	-	chr6.4:54665332-54665351	MS.gene81877:CDS	25.0%
!	GTTTAATTGCTTAAATAGGA+TGG	+	chr6.4:54664810-54664829	None:intergenic	25.0%
!	TCACGTTTAATTGCTTAAAT+AGG	+	chr6.4:54664814-54664833	None:intergenic	25.0%
!!	TACAAAAAGGTCACTAATTT+TGG	-	chr6.4:54664513-54664532	MS.gene81877:CDS	25.0%
!!!	AAAAAAGCTTTGGAGAATTT+AGG	+	chr6.4:54663987-54664006	None:intergenic	25.0%
!!!	ATAGCGATTTTTTGAAAGAA+TGG	+	chr6.4:54665422-54665441	None:intergenic	25.0%
	AATATTCATGTGATGCATTG+TGG	-	chr6.4:54665619-54665638	MS.gene81877:CDS	30.0%
	ACATTATGTGGACAATCATA+TGG	-	chr6.4:54663003-54663022	MS.gene81877:CDS	30.0%
	AGCAAATTCAATATCGTACT+GGG	-	chr6.4:54663365-54663384	MS.gene81877:CDS	30.0%
	ATATGATCCAAGATTGACAA+AGG	+	chr6.4:54665324-54665343	None:intergenic	30.0%
	ATATTCATGTGATGCATTGT+GGG	-	chr6.4:54665620-54665639	MS.gene81877:CDS	30.0%
	ATTTCGGTTAAAAGACTAGA+TGG	-	chr6.4:54664378-54664397	MS.gene81877:CDS	30.0%
	CAGTAGATATTTCATGATCT+TGG	+	chr6.4:54663149-54663168	None:intergenic	30.0%
	GACTAAAATGCTCTCAATAA+CGG	+	chr6.4:54664177-54664196	None:intergenic	30.0%
	TAGCAAATTCAATATCGTAC+TGG	-	chr6.4:54663364-54663383	MS.gene81877:CDS	30.0%
	TAGTACAAAAGCGAATACAA+TGG	+	chr6.4:54665369-54665388	None:intergenic	30.0%
	TATACCATTATCCAACATAG+AGG	+	chr6.4:54663312-54663331	None:intergenic	30.0%
	TATTTATAATATAGGGGCTG+TGG	-	chr6.4:54665471-54665490	MS.gene81877:CDS	30.0%
	TCATGTAAGAAAACATGGAA+TGG	-	chr6.4:54663429-54663448	MS.gene81877:intron	30.0%
	TTATAGCAATGAAGAAGAAG+TGG	-	chr6.4:54664238-54664257	MS.gene81877:intron	30.0%
!	AGATCCATTCTCATTTTACT+TGG	-	chr6.4:54663123-54663142	MS.gene81877:intron	30.0%
!	TGTTGACATTCCTTTTATTC+AGG	-	chr6.4:54665644-54665663	MS.gene81877:CDS	30.0%
!	TTCCATGTTTTCTTACATGA+AGG	+	chr6.4:54663429-54663448	None:intergenic	30.0%
!!	ATGTAAGCACAATTAGTCTT+TGG	+	chr6.4:54664624-54664643	None:intergenic	30.0%
!!	GTACGATATTGAATTTGCTA+TGG	+	chr6.4:54663364-54663383	None:intergenic	30.0%
!!	TTAACCTTTTGTTTGTGACT+TGG	-	chr6.4:54663858-54663877	MS.gene81877:intron	30.0%
!!	TTCGCTTTTGTACTACATAT+TGG	-	chr6.4:54665374-54665393	MS.gene81877:CDS	30.0%
!!!	GTTATTGAGAGCATTTTAGT+CGG	-	chr6.4:54664176-54664195	MS.gene81877:intron	30.0%
!!!	GTTGTTATTTGAACTTTTCC+TGG	+	chr6.4:54665124-54665143	None:intergenic	30.0%
	AAACATCTGTGCTTTCTATC+TGG	-	chr6.4:54663744-54663763	MS.gene81877:intron	35.0%
	AAACCACAGACATTTGTAGT+CGG	+	chr6.4:54664649-54664668	None:intergenic	35.0%
	AGAACCAAGTCACAAACAAA+AGG	+	chr6.4:54663865-54663884	None:intergenic	35.0%
	ATGAAGTAATGTTGTAACCG+AGG	+	chr6.4:54663286-54663305	None:intergenic	35.0%
	ATGGTATACAAGTCTGGATT+AGG	-	chr6.4:54663324-54663343	MS.gene81877:CDS	35.0%
	ATTCGTGTTTCGAATGAACT+TGG	-	chr6.4:54664098-54664117	MS.gene81877:intron	35.0%
	CATGAAATATCTACTGAAGC+TGG	-	chr6.4:54663153-54663172	MS.gene81877:CDS	35.0%
	CTAAGTGGGTAAAAAAGAGA+AGG	-	chr6.4:54664784-54664803	MS.gene81877:CDS	35.0%
	CTCCTTCATGTAAGAAAACA+TGG	-	chr6.4:54663424-54663443	MS.gene81877:intron	35.0%
	GAATTAATGGTTCTCCTTTC+TGG	-	chr6.4:54663698-54663717	MS.gene81877:intron	35.0%
	GATGTTTCCAACTTTGGATT+TGG	+	chr6.4:54663731-54663750	None:intergenic	35.0%
	GGAGGCAAGGTAAAATTAAA+TGG	-	chr6.4:54665395-54665414	MS.gene81877:CDS	35.0%
	TAAATACAACTGCAGCTGTT+TGG	-	chr6.4:54663892-54663911	MS.gene81877:intron	35.0%
	TACTTCATCTTCCTCTATGT+TGG	-	chr6.4:54663298-54663317	MS.gene81877:intron	35.0%
	TAGATATGGCTCATAGTTAC+TGG	+	chr6.4:54664760-54664779	None:intergenic	35.0%
	TATTCATGTGATGCATTGTG+GGG	-	chr6.4:54665621-54665640	MS.gene81877:CDS	35.0%
	TCTTCCTCTATGTTGGATAA+TGG	-	chr6.4:54663305-54663324	MS.gene81877:intron	35.0%
	TCTTCTTCCAAATCCAAAGT+TGG	-	chr6.4:54663721-54663740	MS.gene81877:intron	35.0%
	TTAGAAGTTCCCATATGTCT+CGG	+	chr6.4:54664484-54664503	None:intergenic	35.0%
	TTGCATTCCATCTAGTAAGT+GGG	+	chr6.4:54664303-54664322	None:intergenic	35.0%
	TTGGCCAAGTAAAATGAGAA+TGG	+	chr6.4:54663130-54663149	None:intergenic	35.0%
	TTGTCCACATAATGTGTCTA+AGG	+	chr6.4:54662998-54663017	None:intergenic	35.0%
	TTTAACATAGAGTGCGAGTA+TGG	+	chr6.4:54663400-54663419	None:intergenic	35.0%
!	AACATGGAATGGTTTTTCCA+AGG	-	chr6.4:54663440-54663459	MS.gene81877:intron	35.0%
!	GCTTTTGTACTACATATTGG+AGG	-	chr6.4:54665377-54665396	MS.gene81877:CDS	35.0%
!	GTGTTATGAAGTACTAGAGT+AGG	+	chr6.4:54663540-54663559	None:intergenic	35.0%
!	TCATTACAATACGCACTGAT+TGG	-	chr6.4:54665540-54665559	MS.gene81877:CDS	35.0%
!	TCCTTTTATTCAGGCAAAGA+AGG	-	chr6.4:54665653-54665672	MS.gene81877:CDS	35.0%
!	TGGATAATGGTATACAAGTC+TGG	-	chr6.4:54663318-54663337	MS.gene81877:CDS	35.0%
!!	CATTACAATACGCACTGATT+GGG	-	chr6.4:54665541-54665560	MS.gene81877:CDS	35.0%
	AAAAGCAGACCGAGACATAT+GGG	-	chr6.4:54664472-54664491	MS.gene81877:CDS	40.0%
	AAGTGGGATATGGCAAGAAT+TGG	+	chr6.4:54664287-54664306	None:intergenic	40.0%
	ACAACATACGAGACTCAAAC+AGG	-	chr6.4:54664965-54664984	MS.gene81877:CDS	40.0%
	ACCCACTTAGATGCTAGATA+TGG	+	chr6.4:54664774-54664793	None:intergenic	40.0%
	AGCACAGATGTTTCCAACTT+TGG	+	chr6.4:54663737-54663756	None:intergenic	40.0%
	AGCCATATCTAGCATCTAAG+TGG	-	chr6.4:54664769-54664788	MS.gene81877:CDS	40.0%
	AGTGCCTTAGACACATTATG+TGG	-	chr6.4:54662991-54663010	MS.gene81877:CDS	40.0%
	ATCTGTGCTTTCTATCTGGT+TGG	-	chr6.4:54663748-54663767	MS.gene81877:intron	40.0%
	ATGGCAAGCTTCAGGAAAAT+TGG	+	chr6.4:54663489-54663508	None:intergenic	40.0%
	CAACATACGAGACTCAAACA+GGG	-	chr6.4:54664966-54664985	MS.gene81877:CDS	40.0%
	CATCGTGACGAGGAAAAAAA+TGG	+	chr6.4:54663654-54663673	None:intergenic	40.0%
	CATTCCCCTCGCAATTATTT+GGG	-	chr6.4:54663092-54663111	MS.gene81877:intron	40.0%
	CTGATTATGCCTCTATGTCT+AGG	+	chr6.4:54665196-54665215	None:intergenic	40.0%
	CTTGCATTCCATCTAGTAAG+TGG	+	chr6.4:54664304-54664323	None:intergenic	40.0%
	GACGATCATGAGAATGAACA+TGG	+	chr6.4:54663070-54663089	None:intergenic	40.0%
	GAGCTGTAAGGTTTGAATAC+AGG	-	chr6.4:54663937-54663956	MS.gene81877:intron	40.0%
	GATCTCCTTCACTATGATTC+AGG	-	chr6.4:54665263-54665282	MS.gene81877:CDS	40.0%
	GATTTGGAAGAAGACCAGAA+AGG	+	chr6.4:54663715-54663734	None:intergenic	40.0%
	GCCATATCTAGCATCTAAGT+GGG	-	chr6.4:54664770-54664789	MS.gene81877:CDS	40.0%
	GCCTTCTTTGCCTGAATAAA+AGG	+	chr6.4:54665657-54665676	None:intergenic	40.0%
	GTAGAAGACCGTAAGCAAAA+AGG	+	chr6.4:54663206-54663225	None:intergenic	40.0%
	GTTTGCCCAAATAATTGCGA+GGG	+	chr6.4:54663100-54663119	None:intergenic	40.0%
	TAAAAGCAGACCGAGACATA+TGG	-	chr6.4:54664471-54664490	MS.gene81877:CDS	40.0%
	TCCATCTAGTAAGTGGGATA+TGG	+	chr6.4:54664297-54664316	None:intergenic	40.0%
	TGGCAAGCTTCAGGAAAATT+GGG	+	chr6.4:54663488-54663507	None:intergenic	40.0%
	TGGCAGCTATGCTAAGTTAA+TGG	-	chr6.4:54663173-54663192	MS.gene81877:CDS	40.0%
	TGTACTACATATTGGAGGCA+AGG	-	chr6.4:54665382-54665401	MS.gene81877:CDS	40.0%
	TGTTTGCCCAAATAATTGCG+AGG	+	chr6.4:54663101-54663120	None:intergenic	40.0%
	TTGCAAGTTCGATGATTACC+AGG	-	chr6.4:54665103-54665122	MS.gene81877:intron	40.0%
	TTTGCCCAAATAATTGCGAG+GGG	+	chr6.4:54663099-54663118	None:intergenic	40.0%
!	GTTCCATGCCTTTTTGCTTA+CGG	-	chr6.4:54663195-54663214	MS.gene81877:CDS	40.0%
!	TCCAATGATGTTTAGCTCCT+CGG	-	chr6.4:54663266-54663285	MS.gene81877:intron	40.0%
!!!	TGAGAGCATTTTAGTCGGAA+CGG	-	chr6.4:54664181-54664200	MS.gene81877:intron	40.0%
	AAAGCGAATACAATGGCTGC+TGG	+	chr6.4:54665362-54665381	None:intergenic	45.0%
	ACCGAGGAGCTAAACATCAT+TGG	+	chr6.4:54663270-54663289	None:intergenic	45.0%
	AGACCGTAAGCAAAAAGGCA+TGG	+	chr6.4:54663201-54663220	None:intergenic	45.0%
	ATAATATAGGGGCTGTGGCT+GGG	-	chr6.4:54665476-54665495	MS.gene81877:CDS	45.0%
	ATTGGCGCCTTTGTCAATCT+TGG	-	chr6.4:54665314-54665333	MS.gene81877:CDS	45.0%
	CAGTGCCTGAATCATAGTGA+AGG	+	chr6.4:54665271-54665290	None:intergenic	45.0%
	CCAAATAATTGCGAGGGGAA+TGG	+	chr6.4:54663094-54663113	None:intergenic	45.0%
	CCATTCCCCTCGCAATTATT+TGG	-	chr6.4:54663091-54663110	MS.gene81877:intron	45.0%
	GACCATTACAGCTGAAGGAA+TGG	+	chr6.4:54663508-54663527	None:intergenic	45.0%
	GCCATATCCCACTTACTAGA+TGG	-	chr6.4:54664293-54664312	MS.gene81877:intron	45.0%
	GGAATGCAAGCTGTTCTTTC+AGG	-	chr6.4:54664314-54664333	MS.gene81877:intron	45.0%
	GGATGTGGTTGGCAGAAAAT+TGG	-	chr6.4:54665296-54665315	MS.gene81877:CDS	45.0%
	TACCAGACCATTACAGCTGA+AGG	+	chr6.4:54663513-54663532	None:intergenic	45.0%
	TATAATATAGGGGCTGTGGC+TGG	-	chr6.4:54665475-54665494	MS.gene81877:CDS	45.0%
	TCTCCGACTACAAATGTCTG+TGG	-	chr6.4:54664643-54664662	MS.gene81877:intron	45.0%
	TGCCATTCCTTCAGCTGTAA+TGG	-	chr6.4:54663503-54663522	MS.gene81877:intron	45.0%
	TTCCTTCAGCTGTAATGGTC+TGG	-	chr6.4:54663508-54663527	MS.gene81877:intron	45.0%
	TTGGCGTTTCCTAGACATAG+AGG	-	chr6.4:54665184-54665203	MS.gene81877:CDS	45.0%
!	AAGTCTGGATTAGGTAGCAG+AGG	-	chr6.4:54663333-54663352	MS.gene81877:CDS	45.0%
!	ACAAAGCGCTTGAACAACGA+GGG	+	chr6.4:54665513-54665532	None:intergenic	45.0%
!	TATGATTCAGGCACTGCTAG+AGG	-	chr6.4:54665275-54665294	MS.gene81877:CDS	45.0%
!!	GTTTCGAATGAACTTGGTGC+TGG	-	chr6.4:54664104-54664123	MS.gene81877:intron	45.0%
!!	AATAAATATTTATAATATAG+GGG	-	chr6.4:54665465-54665484	MS.gene81877:CDS	5.0%
!!	AATATACAAATAAAAATTTA+AGG	-	chr6.4:54664845-54664864	MS.gene81877:intron	5.0%
!!	CTAATAAATATTTATAATAT+AGG	-	chr6.4:54665463-54665482	MS.gene81877:CDS	5.0%
	ACAGCTCCACTAAGTCCGAA+GGG	+	chr6.4:54663924-54663943	None:intergenic	50.0%
	ATGATCCCCTTCGGACTTAG+TGG	-	chr6.4:54663915-54663934	MS.gene81877:intron	50.0%
	CGATGAGCAGCTTGGAAATG+TGG	-	chr6.4:54663669-54663688	MS.gene81877:intron	50.0%
	CTGAAGGAATGGCAAGCTTC+AGG	+	chr6.4:54663497-54663516	None:intergenic	50.0%
	GCATGTGTATGCCTGACATG+CGG	+	chr6.4:54663041-54663060	None:intergenic	50.0%
	GCTGTTTGGATGATCCCCTT+CGG	-	chr6.4:54663906-54663925	MS.gene81877:intron	50.0%
	TAATATAGGGGCTGTGGCTG+GGG	-	chr6.4:54665477-54665496	MS.gene81877:CDS	50.0%
	TACAGCTCCACTAAGTCCGA+AGG	+	chr6.4:54663925-54663944	None:intergenic	50.0%
	TCGGACTTAGTGGAGCTGTA+AGG	-	chr6.4:54663925-54663944	MS.gene81877:intron	50.0%
!	GACAAAGCGCTTGAACAACG+AGG	+	chr6.4:54665514-54665533	None:intergenic	50.0%
!!	ACGCACTGATTGGGAGAAAG+AGG	-	chr6.4:54665550-54665569	MS.gene81877:CDS	50.0%
	CAGCTCCACTAAGTCCGAAG+GGG	+	chr6.4:54663923-54663942	None:intergenic	55.0%
	GCAAAGCAGTACCGCATGTC+AGG	-	chr6.4:54663027-54663046	MS.gene81877:intron	55.0%
	GCACTGCTAGAGGATGTGGT+TGG	-	chr6.4:54665285-54665304	MS.gene81877:CDS	55.0%
	GTTCAGCGCAAGTGCTTCCT+TGG	+	chr6.4:54663460-54663479	None:intergenic	55.0%
!	TCAGGCACTGCTAGAGGATG+TGG	-	chr6.4:54665281-54665300	MS.gene81877:CDS	55.0%
!!	ACTTGGTGCTGGTCATCCAC+TGG	-	chr6.4:54664115-54664134	MS.gene81877:intron	55.0%
	CCAAGCTGCTCATCGTGACG+AGG	+	chr6.4:54663664-54663683	None:intergenic	60.0%
	CCTCGTCACGATGAGCAGCT+TGG	-	chr6.4:54663661-54663680	MS.gene81877:intron	60.0%
!	TCATCCACTGGCTGCGCGTT+TGG	-	chr6.4:54664127-54664146	MS.gene81877:intron	60.0%
	ACTGCCAAACGCGCAGCCAG+TGG	+	chr6.4:54664134-54664153	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr6.4	gene	54662985	54665725	54662985	ID=MS.gene81877
chr6.4	mRNA	54662985	54665725	54662985	ID=MS.gene81877.t1;Parent=MS.gene81877
chr6.4	exon	54665181	54665725	54665181	ID=MS.gene81877.t1.exon1;Parent=MS.gene81877.t1
chr6.4	CDS	54665181	54665725	54665181	ID=cds.MS.gene81877.t1;Parent=MS.gene81877.t1
chr6.4	exon	54664945	54665031	54664945	ID=MS.gene81877.t1.exon2;Parent=MS.gene81877.t1
chr6.4	CDS	54664945	54665031	54664945	ID=cds.MS.gene81877.t1;Parent=MS.gene81877.t1
chr6.4	exon	54664764	54664820	54664764	ID=MS.gene81877.t1.exon3;Parent=MS.gene81877.t1
chr6.4	CDS	54664764	54664820	54664764	ID=cds.MS.gene81877.t1;Parent=MS.gene81877.t1
chr6.4	exon	54664375	54664613	54664375	ID=MS.gene81877.t1.exon4;Parent=MS.gene81877.t1
chr6.4	CDS	54664375	54664613	54664375	ID=cds.MS.gene81877.t1;Parent=MS.gene81877.t1
chr6.4	exon	54663307	54663425	54663307	ID=MS.gene81877.t1.exon5;Parent=MS.gene81877.t1
chr6.4	CDS	54663307	54663425	54663307	ID=cds.MS.gene81877.t1;Parent=MS.gene81877.t1
chr6.4	exon	54663139	54663225	54663139	ID=MS.gene81877.t1.exon6;Parent=MS.gene81877.t1
chr6.4	CDS	54663139	54663225	54663139	ID=cds.MS.gene81877.t1;Parent=MS.gene81877.t1
chr6.4	exon	54662985	54663044	54662985	ID=MS.gene81877.t1.exon7;Parent=MS.gene81877.t1
chr6.4	CDS	54662985	54663044	54662985	ID=cds.MS.gene81877.t1;Parent=MS.gene81877.t1

Gene Sequence

>MS.gene81877

ATGGCAAGTGCCTTAGACACATTATGTGGACAATCATATGGCGCAAAGCAGTACCGCATGTCAGGCATACACATGCAAAGAGCCATGTTCATTCTCATGATCGTCGCCATTCCCCTCGCAATTATTTGGGCAAACACAAGATCCATTCTCATTTTACTTGGCCAAGATCATGAAATATCTACTGAAGCTGGCAGCTATGCTAAGTTAATGGTTCCATGCCTTTTTGCTTACGGTCTTCTACAATGTCTCAACAGATTCCTACAAACTCAAAATATTGTATTTCCAATGATGTTTAGCTCCTCGGTTACAACATTACTTCATCTTCCTCTATGTTGGATAATGGTATACAAGTCTGGATTAGGTAGCAGAGGAGCTGCCATAGCAAATTCAATATCGTACTGGGTGAATGTTACCATACTCGCACTCTATGTTAAATTTTCTCCTTCATGTAAGAAAACATGGAATGGTTTTTCCAAGGAAGCACTTGCGCTGAACAACATCCCAATTTTCCTGAAGCTTGCCATTCCTTCAGCTGTAATGGTCTGGTAATCACCTACTCTAGTACTTCATAACACCACATATTATAATAGAATTTTATTTATTGTTTAGTTACTCTTTTGAACATTACTACAGTTTCATTTATTTTTAGAGATTCTAAAGTTGTTTCCATTTTTTTCCTCGTCACGATGAGCAGCTTGGAAATGTGGTCATTTGAATTAATGGTTCTCCTTTCTGGTCTTCTTCCAAATCCAAAGTTGGAAACATCTGTGCTTTCTATCTGGTTGGTTGCATATTTGAGATCGTCTTCGACATTATTGTTACATTATTATTATTATTATTATTATTATTATTATTATTATTATTATAATTTTCTTAACCTTTTGTTTGTGACTTGGTTCTGTCAGTTTAAATACAACTGCAGCTGTTTGGATGATCCCCTTCGGACTTAGTGGAGCTGTAAGGTTTGAATACAGGAGCAGCCTTACTATTTAACTTAATCCTAAATTCTCCAAAGCTTTTTTCTCTTTTTTAATTTCATGTTATTTTTTTTTCTTCTTTCTTTCTTTAGTTTTTGTCTGTTGTGTGATTAGTGCTTGACTGATTATTTGCAGCATTCGTGTTTCGAATGAACTTGGTGCTGGTCATCCACTGGCTGCGCGTTTGGCAGTTTGTGTCGTTGTAGTGATTGCCGTTATTGAGAGCATTTTAGTCGGAACGGTGATTATACTAGTTCGTAATTTATGGGGTTATGCTTATAGCAATGAAGAAGAAGTGGTCAAATATGTTGCAACTATGATGCCAATTCTTGCCATATCCCACTTACTAGATGGAATGCAAGCTGTTCTTTCAGGTCTTTATTTCCAACAACTTTTGATTTTATTTTGTTCATATGATTTCGGTTAAAAGACTAGATGGAATGCAAGCTGTTCTTTCAGGTTTTTGTTTCCAACAACTTTTGATTTTATTTTGTTCATATGATTTCGGTTAAAAGCAGACCGAGACATATGGGAACTTCTAATATATATCATACAAAAAGGTCACTAATTTTGGATGCTAAAAGTTAAGTAGTAAGTAATCAAATAATTTGAAGTATAGTTTGGTTATATGAATCATTTTGTTTGGAAATAAATCGGTGCCAAAGACTAATTGTGCTTACATCTCCGACTACAAATGTCTGTGGTTTATTTCCACTATTTGAAGCTTTGATTTTCCAATATATAATTGTGTATTAAATACTATGGTTCATATTACAACATTATCGCTGAATATCACCAGTAACTATGAGCCATATCTAGCATCTAAGTGGGTAAAAAAGAGAAGGCCATCCTATTTAAGCAATTAAACGTGAGAAGAGAAGTTAATATACAAATAAAAATTTAAGGAATGTTTCTTCTACAATGATATTTTAGTTTAACAAATAACATAATTAAACTATTATGTGATTGTCCTTGATTTGAGTTTTTTTTCTTTTCACTTTGAACAACATACGAGACTCAAACAGGGTTAGCTTGTTTTGTAGCCTTTTTTCTATAAAACTCAGATTAAGATTTACTTCTTGCTTGCAGCAAAAGCATGAACTAGATGATTTCTTTTCACTTAGTATGTATTTAATAAATATTGCAAGTTCGATGATTACCAGGAAAAGTTCAAATAACAACAGAAATTAGAGATCGAAAAAAATAAAATAGGTCATCAAAGTTGGCGTTTCCTAGACATAGAGGCATAATCAGCAATATATTTTGTATTTTTCTGTCTCTAAATTTCGGTCGTTACAAATGATCTCCTTCACTATGATTCAGGCACTGCTAGAGGATGTGGTTGGCAGAAAATTGGCGCCTTTGTCAATCTTGGATCATATTATTTAGTTGGGATTCCAGCAGCCATTGTATTCGCTTTTGTACTACATATTGGAGGCAAGGTAAAATTAAATGGTCCATTCTTTCAAAAAATCGCTATCATAATATTTGGTTCAACCTGCTAATAAATATTTATAATATAGGGGCTGTGGCTGGGGATTATATGTGCCCTCGTTGTTCAAGCGCTTTGTCTAACGATCATTACAATACGCACTGATTGGGAGAAAGAGGTGAAATTCTTCATTTTTATTTATAATGTGTTTCCTTTCATTAAATAAATATTCATGTGATGCATTGTGGGGTGTTGACATTCCTTTTATTCAGGCAAAGAAGGCTACTGATAGAGTTCATAATGCAATAACAACAGAGAGCTTAGTCTCATGA

Protein sequence

>MS.gene81877.t1

MASALDTLCGQSYGAKQYRMSGIHMQRAMFILMIVAIPLAIIWANTRSILILLGQDHEISTEAGSYAKLMVPCLFAYGLLQCLNRFLQTQNIVFPMMFSSSVTTLLHLPLCWIMVYKSGLGSRGAAIANSISYWVNVTILALYVKFSPSCKKTWNGFSKEALALNNIPIFLKLAIPSAVMVCLEMWSFELMVLLSGLLPNPKLETSVLSICLNTTAAVWMIPFGLSGAVSIRVSNELGAGHPLAARLAVCVVVVIAVIESILVGTVIILVRNLWGYAYSNEEEVVKYVATMMPILAISHLLDGMQAVLSGTARGCGWQKIGAFVNLGSYYLVGIPAAIVFAFVLHIGGKGLWLGIICALVVQALCLTIITIRTDWEKEAKKATDRVHNAITTESLVS