Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59995.t1 | XP_013452945.1 | 95 | 378 | 19 | 0 | 1 | 378 | 103 | 480 | 2.10E-196 | 694.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59995.t1 | Q9FHB6 | 67.6 | 370 | 118 | 1 | 1 | 370 | 103 | 470 | 8.7e-143 | 508.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59995.t1 | A0A072UD23 | 95.0 | 378 | 19 | 0 | 1 | 378 | 103 | 480 | 1.5e-196 | 694.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05105 | MS.gene59995 | 0.816982 | 4.18E-52 | -1.69E-46 |
| MS.gene051387 | MS.gene59995 | 0.816979 | 4.18E-52 | -1.69E-46 |
| MS.gene052421 | MS.gene59995 | 0.811668 | 6.24E-51 | -1.69E-46 |
| MS.gene052999 | MS.gene59995 | 0.809572 | 1.77E-50 | -1.69E-46 |
| MS.gene053169 | MS.gene59995 | 0.815971 | 7.03E-52 | -1.69E-46 |
| MS.gene05335 | MS.gene59995 | 0.86435 | 1.30E-64 | -1.69E-46 |
| MS.gene053758 | MS.gene59995 | 0.801873 | 7.33E-49 | -1.69E-46 |
| MS.gene053813 | MS.gene59995 | 0.803796 | 2.94E-49 | -1.69E-46 |
| MS.gene054010 | MS.gene59995 | 0.824726 | 6.90E-54 | -1.69E-46 |
| MS.gene054012 | MS.gene59995 | 0.80385 | 2.86E-49 | -1.69E-46 |
| MS.gene054013 | MS.gene59995 | 0.800732 | 1.26E-48 | -1.69E-46 |
| MS.gene054556 | MS.gene59995 | 0.810494 | 1.12E-50 | -1.69E-46 |
| MS.gene055909 | MS.gene59995 | 0.828842 | 7.18E-55 | -1.69E-46 |
| MS.gene055911 | MS.gene59995 | 0.837685 | 4.49E-57 | -1.69E-46 |
| MS.gene056902 | MS.gene59995 | 0.808891 | 2.48E-50 | -1.69E-46 |
| MS.gene057823 | MS.gene59995 | 0.808236 | 3.42E-50 | -1.69E-46 |
| MS.gene058075 | MS.gene59995 | 0.801193 | 1.01E-48 | -1.69E-46 |
| MS.gene058120 | MS.gene59995 | 0.807239 | 5.57E-50 | -1.69E-46 |
| MS.gene058700 | MS.gene59995 | 0.828196 | 1.03E-54 | -1.69E-46 |
| MS.gene058948 | MS.gene59995 | 0.801211 | 1.00E-48 | -1.69E-46 |
| MS.gene058995 | MS.gene59995 | 0.800623 | 1.32E-48 | -1.69E-46 |
| MS.gene059420 | MS.gene59995 | 0.801009 | 1.10E-48 | -1.69E-46 |
| MS.gene059680 | MS.gene59995 | 0.810126 | 1.35E-50 | -1.69E-46 |
| MS.gene059711 | MS.gene59995 | 0.804331 | 2.27E-49 | -1.69E-46 |
| MS.gene060372 | MS.gene59995 | 0.834155 | 3.53E-56 | -1.69E-46 |
| MS.gene060837 | MS.gene59995 | 0.826283 | 2.95E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene73453 | MS.gene59995 | PPI |
| MS.gene71749 | MS.gene59995 | PPI |
| MS.gene59995 | MS.gene042352 | PPI |
| MS.gene59999 | MS.gene59995 | PPI |
| MS.gene81877 | MS.gene59995 | PPI |
| MS.gene042358 | MS.gene59995 | PPI |
| MS.gene05336 | MS.gene59995 | PPI |
| MS.gene59995 | MS.gene71750 | PPI |
| MS.gene59995 | MS.gene82778 | PPI |
| MS.gene032679 | MS.gene59995 | PPI |
| MS.gene029501 | MS.gene59995 | PPI |
| MS.gene59995 | MS.gene020465 | PPI |
| MS.gene59995 | MS.gene59997 | PPI |
| MS.gene59995 | MS.gene024208 | PPI |
| MS.gene05335 | MS.gene59995 | PPI |
| MS.gene59995 | MS.gene81884 | PPI |
| MS.gene59995 | MS.gene73451 | PPI |
| MS.gene029498 | MS.gene59995 | PPI |
| MS.gene59995 | MS.gene042353 | PPI |
| MS.gene55012 | MS.gene59995 | PPI |
| MS.gene05341 | MS.gene59995 | PPI |
| MS.gene59995 | MS.gene053097 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59995.t1 | MTR_6g081410 | 94.974 | 378 | 19 | 0 | 1 | 378 | 103 | 480 | 0.0 | 707 |
| MS.gene59995.t1 | MTR_6g081780 | 87.566 | 378 | 47 | 0 | 1 | 378 | 103 | 480 | 0.0 | 658 |
| MS.gene59995.t1 | MTR_6g066380 | 82.804 | 378 | 65 | 0 | 1 | 378 | 105 | 482 | 0.0 | 629 |
| MS.gene59995.t1 | MTR_6g081810 | 79.894 | 378 | 48 | 1 | 1 | 378 | 105 | 454 | 0.0 | 588 |
| MS.gene59995.t1 | MTR_6g081400 | 60.582 | 378 | 147 | 1 | 1 | 378 | 94 | 469 | 5.49e-165 | 470 |
| MS.gene59995.t1 | MTR_6g081390 | 62.698 | 378 | 139 | 1 | 1 | 378 | 91 | 466 | 1.56e-163 | 466 |
| MS.gene59995.t1 | MTR_8g106670 | 59.730 | 370 | 147 | 1 | 1 | 370 | 90 | 457 | 1.36e-155 | 447 |
| MS.gene59995.t1 | MTR_1g108810 | 59.003 | 361 | 146 | 1 | 1 | 361 | 112 | 470 | 1.94e-155 | 446 |
| MS.gene59995.t1 | MTR_6g081300 | 55.707 | 368 | 161 | 1 | 1 | 368 | 88 | 453 | 3.97e-143 | 415 |
| MS.gene59995.t1 | MTR_6g081240 | 56.546 | 359 | 154 | 1 | 1 | 359 | 88 | 444 | 2.53e-141 | 409 |
| MS.gene59995.t1 | MTR_6g081310 | 56.349 | 378 | 152 | 2 | 1 | 367 | 75 | 450 | 4.07e-139 | 404 |
| MS.gene59995.t1 | MTR_6g004220 | 50.696 | 359 | 175 | 1 | 9 | 367 | 110 | 466 | 1.19e-128 | 378 |
| MS.gene59995.t1 | MTR_1g108840 | 50.409 | 367 | 180 | 1 | 3 | 369 | 121 | 485 | 3.51e-126 | 372 |
| MS.gene59995.t1 | MTR_6g004220 | 50.712 | 351 | 171 | 1 | 9 | 359 | 117 | 465 | 1.98e-124 | 368 |
| MS.gene59995.t1 | MTR_1g108990 | 50.681 | 367 | 179 | 1 | 3 | 369 | 105 | 469 | 9.94e-122 | 360 |
| MS.gene59995.t1 | MTR_7g082810 | 47.606 | 376 | 195 | 1 | 3 | 378 | 100 | 473 | 7.14e-120 | 355 |
| MS.gene59995.t1 | MTR_7g082800 | 47.397 | 365 | 190 | 1 | 3 | 367 | 22 | 384 | 1.16e-117 | 347 |
| MS.gene59995.t1 | MTR_1g109060 | 48.641 | 368 | 187 | 1 | 3 | 370 | 104 | 469 | 1.16e-116 | 347 |
| MS.gene59995.t1 | MTR_1g109060 | 49.020 | 357 | 180 | 1 | 3 | 359 | 104 | 458 | 6.20e-113 | 338 |
| MS.gene59995.t1 | MTR_2g088400 | 42.005 | 369 | 212 | 1 | 1 | 369 | 130 | 496 | 5.99e-100 | 305 |
| MS.gene59995.t1 | MTR_6g004220 | 50.883 | 283 | 137 | 1 | 9 | 291 | 117 | 397 | 5.26e-96 | 293 |
| MS.gene59995.t1 | MTR_4g048000 | 41.005 | 378 | 220 | 2 | 1 | 377 | 142 | 517 | 9.16e-96 | 295 |
| MS.gene59995.t1 | MTR_2g022980 | 41.129 | 372 | 214 | 2 | 1 | 369 | 126 | 495 | 4.22e-95 | 293 |
| MS.gene59995.t1 | MTR_2g078930 | 40.431 | 371 | 212 | 3 | 1 | 366 | 121 | 487 | 4.77e-91 | 282 |
| MS.gene59995.t1 | MTR_2g078960 | 40.782 | 358 | 210 | 1 | 1 | 358 | 111 | 466 | 1.14e-89 | 278 |
| MS.gene59995.t1 | MTR_2g079020 | 39.050 | 379 | 222 | 3 | 3 | 376 | 117 | 491 | 9.79e-88 | 274 |
| MS.gene59995.t1 | MTR_2g078970 | 37.135 | 377 | 232 | 2 | 1 | 374 | 109 | 483 | 4.15e-85 | 267 |
| MS.gene59995.t1 | MTR_2g088400 | 41.818 | 330 | 190 | 1 | 1 | 330 | 130 | 457 | 8.48e-85 | 265 |
| MS.gene59995.t1 | MTR_8g063590 | 40.106 | 379 | 220 | 4 | 3 | 378 | 133 | 507 | 9.19e-82 | 259 |
| MS.gene59995.t1 | MTR_5g033100 | 39.024 | 369 | 222 | 2 | 1 | 369 | 134 | 499 | 3.54e-81 | 257 |
| MS.gene59995.t1 | MTR_1g021740 | 37.940 | 369 | 226 | 2 | 1 | 369 | 113 | 478 | 1.95e-78 | 249 |
| MS.gene59995.t1 | MTR_8g069470 | 37.669 | 369 | 227 | 2 | 1 | 369 | 128 | 493 | 7.15e-78 | 249 |
| MS.gene59995.t1 | MTR_5g090290 | 37.802 | 373 | 230 | 1 | 4 | 376 | 127 | 497 | 1.36e-77 | 249 |
| MS.gene59995.t1 | MTR_5g067460 | 35.294 | 374 | 240 | 1 | 3 | 376 | 135 | 506 | 3.99e-76 | 245 |
| MS.gene59995.t1 | MTR_7g087410 | 35.733 | 375 | 238 | 2 | 1 | 375 | 20 | 391 | 3.95e-74 | 236 |
| MS.gene59995.t1 | MTR_7g087410 | 35.733 | 375 | 238 | 2 | 1 | 375 | 109 | 480 | 5.31e-73 | 235 |
| MS.gene59995.t1 | MTR_7g087430 | 36.658 | 371 | 224 | 4 | 3 | 369 | 22 | 385 | 3.73e-72 | 231 |
| MS.gene59995.t1 | MTR_2g078990 | 36.943 | 314 | 193 | 2 | 66 | 376 | 3 | 314 | 3.85e-72 | 228 |
| MS.gene59995.t1 | MTR_5g032720 | 35.526 | 380 | 234 | 4 | 1 | 372 | 114 | 490 | 1.20e-71 | 232 |
| MS.gene59995.t1 | MTR_1g100180 | 36.856 | 369 | 229 | 3 | 1 | 369 | 121 | 485 | 3.99e-71 | 231 |
| MS.gene59995.t1 | MTR_5g010830 | 34.426 | 366 | 232 | 3 | 3 | 365 | 145 | 505 | 1.03e-69 | 228 |
| MS.gene59995.t1 | MTR_3g111020 | 35.657 | 373 | 232 | 3 | 3 | 372 | 131 | 498 | 1.87e-69 | 228 |
| MS.gene59995.t1 | MTR_1g101500 | 32.967 | 364 | 236 | 3 | 3 | 363 | 144 | 502 | 2.70e-69 | 227 |
| MS.gene59995.t1 | MTR_5g032750 | 37.363 | 364 | 224 | 3 | 1 | 363 | 114 | 474 | 4.69e-67 | 220 |
| MS.gene59995.t1 | MTR_6g043810 | 34.483 | 377 | 220 | 3 | 4 | 363 | 104 | 470 | 1.21e-66 | 219 |
| MS.gene59995.t1 | MTR_6g043810 | 34.483 | 377 | 220 | 3 | 4 | 363 | 114 | 480 | 1.21e-66 | 219 |
| MS.gene59995.t1 | MTR_0039s0080 | 32.447 | 376 | 246 | 4 | 3 | 375 | 118 | 488 | 1.91e-66 | 219 |
| MS.gene59995.t1 | MTR_7g087400 | 32.533 | 375 | 249 | 2 | 1 | 375 | 108 | 478 | 3.83e-66 | 218 |
| MS.gene59995.t1 | MTR_6g047640 | 35.422 | 367 | 233 | 2 | 2 | 368 | 110 | 472 | 1.73e-65 | 216 |
| MS.gene59995.t1 | MTR_7g087370 | 34.203 | 345 | 223 | 2 | 25 | 369 | 103 | 443 | 2.23e-65 | 215 |
| MS.gene59995.t1 | MTR_6g047610 | 33.243 | 367 | 241 | 2 | 2 | 368 | 109 | 471 | 1.19e-64 | 213 |
| MS.gene59995.t1 | MTR_6g004220 | 49.751 | 201 | 99 | 1 | 9 | 209 | 117 | 315 | 1.68e-64 | 209 |
| MS.gene59995.t1 | MTR_6g047640 | 33.243 | 367 | 222 | 3 | 2 | 368 | 110 | 453 | 1.09e-63 | 211 |
| MS.gene59995.t1 | MTR_5g087930 | 34.400 | 375 | 221 | 6 | 4 | 376 | 107 | 458 | 8.88e-61 | 203 |
| MS.gene59995.t1 | MTR_6g088805 | 32.796 | 372 | 240 | 3 | 4 | 370 | 108 | 474 | 6.05e-60 | 201 |
| MS.gene59995.t1 | MTR_3g099700 | 34.048 | 373 | 242 | 3 | 3 | 374 | 126 | 495 | 9.28e-60 | 201 |
| MS.gene59995.t1 | MTR_4g027920 | 31.635 | 373 | 251 | 4 | 8 | 378 | 241 | 611 | 2.99e-59 | 202 |
| MS.gene59995.t1 | MTR_8g102430 | 33.520 | 358 | 216 | 3 | 6 | 363 | 106 | 441 | 5.14e-57 | 192 |
| MS.gene59995.t1 | MTR_3g099720 | 32.000 | 375 | 252 | 2 | 1 | 375 | 119 | 490 | 1.85e-56 | 192 |
| MS.gene59995.t1 | MTR_6g027200 | 32.804 | 378 | 244 | 5 | 1 | 375 | 115 | 485 | 3.01e-56 | 192 |
| MS.gene59995.t1 | MTR_6g047590 | 33.244 | 373 | 245 | 2 | 2 | 374 | 109 | 477 | 3.28e-55 | 189 |
| MS.gene59995.t1 | MTR_6g027190 | 31.622 | 370 | 247 | 3 | 1 | 369 | 103 | 467 | 2.70e-52 | 181 |
| MS.gene59995.t1 | MTR_2g435930 | 28.457 | 376 | 255 | 2 | 6 | 367 | 102 | 477 | 6.04e-50 | 175 |
| MS.gene59995.t1 | MTR_2g079030 | 39.720 | 214 | 126 | 1 | 164 | 374 | 319 | 532 | 4.12e-49 | 174 |
| MS.gene59995.t1 | MTR_5g090280 | 29.500 | 400 | 246 | 4 | 4 | 376 | 23 | 413 | 3.61e-46 | 163 |
| MS.gene59995.t1 | MTR_5g011540 | 32.203 | 354 | 237 | 3 | 22 | 374 | 142 | 493 | 2.97e-44 | 160 |
| MS.gene59995.t1 | MTR_3g087820 | 52.000 | 75 | 36 | 0 | 40 | 114 | 48 | 122 | 3.43e-21 | 88.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59995.t1 | AT5G52450 | 66.489 | 376 | 124 | 1 | 1 | 376 | 103 | 476 | 0.0 | 513 |
| MS.gene59995.t1 | AT2G34360 | 62.803 | 371 | 128 | 4 | 1 | 370 | 104 | 465 | 4.94e-170 | 483 |
| MS.gene59995.t1 | AT1G73700 | 62.400 | 375 | 139 | 1 | 3 | 377 | 103 | 475 | 2.95e-166 | 474 |
| MS.gene59995.t1 | AT2G34360 | 53.514 | 370 | 122 | 2 | 1 | 370 | 104 | 423 | 1.11e-140 | 407 |
| MS.gene59995.t1 | AT1G71140 | 49.041 | 365 | 184 | 1 | 3 | 367 | 105 | 467 | 1.02e-124 | 368 |
| MS.gene59995.t1 | AT1G15170 | 46.361 | 371 | 197 | 1 | 3 | 373 | 113 | 481 | 9.19e-121 | 358 |
| MS.gene59995.t1 | AT1G15170 | 46.703 | 364 | 192 | 1 | 10 | 373 | 1 | 362 | 1.41e-120 | 353 |
| MS.gene59995.t1 | AT1G15160 | 44.681 | 376 | 203 | 2 | 3 | 375 | 110 | 483 | 2.98e-117 | 349 |
| MS.gene59995.t1 | AT1G15150 | 43.617 | 376 | 207 | 2 | 3 | 375 | 110 | 483 | 1.35e-115 | 345 |
| MS.gene59995.t1 | AT1G15150 | 43.902 | 369 | 202 | 2 | 10 | 375 | 1 | 367 | 1.60e-115 | 341 |
| MS.gene59995.t1 | AT1G15180 | 47.170 | 371 | 194 | 1 | 3 | 373 | 114 | 482 | 4.45e-115 | 343 |
| MS.gene59995.t1 | AT2G04100 | 47.443 | 352 | 183 | 2 | 16 | 367 | 122 | 471 | 1.11e-111 | 335 |
| MS.gene59995.t1 | AT2G04070 | 47.443 | 352 | 183 | 1 | 16 | 367 | 119 | 468 | 3.61e-110 | 331 |
| MS.gene59995.t1 | AT1G66760 | 44.959 | 367 | 200 | 1 | 3 | 369 | 107 | 471 | 1.12e-109 | 330 |
| MS.gene59995.t1 | AT2G04040 | 47.191 | 356 | 183 | 2 | 20 | 375 | 123 | 473 | 6.58e-109 | 328 |
| MS.gene59995.t1 | AT2G04100 | 47.384 | 344 | 179 | 2 | 16 | 359 | 122 | 463 | 1.65e-108 | 326 |
| MS.gene59995.t1 | AT2G04080 | 45.308 | 373 | 199 | 3 | 3 | 375 | 106 | 473 | 1.90e-108 | 326 |
| MS.gene59995.t1 | AT2G04090 | 46.591 | 352 | 186 | 2 | 16 | 367 | 122 | 471 | 2.59e-108 | 326 |
| MS.gene59995.t1 | AT1G66760 | 45.098 | 357 | 194 | 1 | 3 | 359 | 107 | 461 | 9.91e-107 | 322 |
| MS.gene59995.t1 | AT2G04050 | 47.727 | 352 | 182 | 1 | 16 | 367 | 119 | 468 | 1.04e-106 | 322 |
| MS.gene59995.t1 | AT2G04080 | 45.125 | 359 | 195 | 2 | 3 | 361 | 106 | 462 | 5.82e-105 | 317 |
| MS.gene59995.t1 | AT1G66760 | 46.687 | 332 | 175 | 1 | 28 | 359 | 4 | 333 | 9.37e-103 | 307 |
| MS.gene59995.t1 | AT1G66780 | 42.896 | 366 | 207 | 1 | 9 | 374 | 120 | 483 | 1.42e-101 | 309 |
| MS.gene59995.t1 | AT1G64820 | 41.918 | 365 | 210 | 1 | 3 | 367 | 108 | 470 | 4.18e-99 | 303 |
| MS.gene59995.t1 | AT1G61890 | 39.024 | 369 | 223 | 1 | 1 | 369 | 124 | 490 | 4.52e-97 | 298 |
| MS.gene59995.t1 | AT1G11670 | 37.931 | 377 | 232 | 1 | 1 | 377 | 127 | 501 | 5.01e-96 | 295 |
| MS.gene59995.t1 | AT1G61890 | 39.276 | 359 | 216 | 1 | 1 | 359 | 124 | 480 | 7.36e-94 | 290 |
| MS.gene59995.t1 | AT3G21690 | 40.108 | 369 | 219 | 1 | 1 | 369 | 129 | 495 | 1.11e-93 | 290 |
| MS.gene59995.t1 | AT3G23550 | 41.061 | 358 | 209 | 1 | 1 | 358 | 108 | 463 | 1.10e-91 | 283 |
| MS.gene59995.t1 | AT3G23560 | 41.620 | 358 | 207 | 1 | 1 | 358 | 116 | 471 | 3.27e-91 | 282 |
| MS.gene59995.t1 | AT4G21903 | 38.298 | 376 | 230 | 1 | 1 | 376 | 20 | 393 | 1.53e-89 | 275 |
| MS.gene59995.t1 | AT4G21910 | 38.587 | 368 | 224 | 1 | 1 | 368 | 131 | 496 | 3.75e-89 | 278 |
| MS.gene59995.t1 | AT4G21910 | 38.587 | 368 | 224 | 1 | 1 | 368 | 131 | 496 | 3.75e-89 | 278 |
| MS.gene59995.t1 | AT4G21910 | 38.587 | 368 | 224 | 1 | 1 | 368 | 133 | 498 | 5.29e-89 | 277 |
| MS.gene59995.t1 | AT4G21910 | 38.587 | 368 | 224 | 1 | 1 | 368 | 133 | 498 | 5.29e-89 | 277 |
| MS.gene59995.t1 | AT4G21903 | 38.587 | 368 | 224 | 1 | 1 | 368 | 129 | 494 | 6.86e-88 | 275 |
| MS.gene59995.t1 | AT1G15180 | 46.290 | 283 | 150 | 1 | 10 | 292 | 1 | 281 | 1.97e-86 | 268 |
| MS.gene59995.t1 | AT4G21903 | 37.760 | 384 | 227 | 3 | 1 | 376 | 129 | 508 | 2.45e-85 | 268 |
| MS.gene59995.t1 | AT3G59030 | 39.247 | 372 | 220 | 3 | 3 | 372 | 130 | 497 | 5.89e-84 | 264 |
| MS.gene59995.t1 | AT1G61890 | 38.485 | 330 | 201 | 1 | 1 | 330 | 124 | 451 | 1.88e-80 | 254 |
| MS.gene59995.t1 | AT3G26590 | 35.501 | 369 | 235 | 2 | 1 | 369 | 20 | 385 | 8.24e-79 | 248 |
| MS.gene59995.t1 | AT1G66760 | 44.291 | 289 | 159 | 1 | 3 | 291 | 107 | 393 | 2.01e-78 | 246 |
| MS.gene59995.t1 | AT3G26590 | 35.501 | 369 | 235 | 2 | 1 | 369 | 122 | 487 | 1.63e-77 | 248 |
| MS.gene59995.t1 | AT5G38030 | 35.230 | 369 | 236 | 2 | 1 | 369 | 122 | 487 | 7.88e-76 | 243 |
| MS.gene59995.t1 | AT1G12950 | 35.230 | 369 | 236 | 2 | 1 | 369 | 144 | 509 | 7.91e-75 | 241 |
| MS.gene59995.t1 | AT1G23300 | 37.398 | 369 | 228 | 2 | 1 | 369 | 121 | 486 | 5.68e-74 | 239 |
| MS.gene59995.t1 | AT1G47530 | 36.314 | 369 | 232 | 2 | 1 | 369 | 20 | 385 | 5.80e-74 | 235 |
| MS.gene59995.t1 | AT1G47530 | 36.314 | 369 | 232 | 2 | 1 | 369 | 112 | 477 | 9.03e-73 | 234 |
| MS.gene59995.t1 | AT5G44050 | 35.676 | 370 | 234 | 3 | 1 | 369 | 117 | 483 | 1.23e-70 | 229 |
| MS.gene59995.t1 | AT1G58340 | 36.088 | 363 | 230 | 1 | 3 | 365 | 137 | 497 | 1.41e-70 | 230 |
| MS.gene59995.t1 | AT2G38510 | 33.884 | 363 | 236 | 4 | 5 | 365 | 86 | 446 | 1.06e-69 | 227 |
| MS.gene59995.t1 | AT4G00350 | 34.146 | 369 | 239 | 2 | 1 | 369 | 165 | 529 | 1.57e-68 | 225 |
| MS.gene59995.t1 | AT4G23030 | 36.571 | 350 | 214 | 3 | 19 | 365 | 128 | 472 | 7.10e-68 | 223 |
| MS.gene59995.t1 | AT5G65380 | 36.486 | 370 | 231 | 3 | 1 | 369 | 114 | 480 | 4.53e-67 | 220 |
| MS.gene59995.t1 | AT1G33090 | 35.904 | 376 | 236 | 4 | 1 | 375 | 113 | 484 | 9.90e-67 | 219 |
| MS.gene59995.t1 | AT3G23560 | 41.237 | 291 | 169 | 1 | 1 | 291 | 116 | 404 | 1.93e-66 | 216 |
| MS.gene59995.t1 | AT1G33100 | 34.667 | 375 | 242 | 2 | 1 | 375 | 110 | 481 | 2.72e-65 | 215 |
| MS.gene59995.t1 | AT4G29140 | 34.916 | 358 | 231 | 1 | 6 | 363 | 138 | 493 | 6.36e-65 | 216 |
| MS.gene59995.t1 | AT5G52050 | 34.435 | 363 | 232 | 3 | 6 | 363 | 117 | 478 | 9.48e-65 | 214 |
| MS.gene59995.t1 | AT5G10420 | 34.840 | 376 | 241 | 3 | 1 | 375 | 115 | 487 | 1.51e-63 | 211 |
| MS.gene59995.t1 | AT1G33110 | 33.777 | 376 | 244 | 4 | 1 | 375 | 113 | 484 | 3.29e-63 | 210 |
| MS.gene59995.t1 | AT1G71870 | 33.773 | 379 | 229 | 4 | 4 | 363 | 104 | 479 | 3.56e-62 | 207 |
| MS.gene59995.t1 | AT1G33080 | 34.043 | 376 | 243 | 4 | 1 | 375 | 113 | 484 | 1.09e-60 | 203 |
| MS.gene59995.t1 | AT5G49130 | 30.964 | 394 | 248 | 5 | 1 | 376 | 103 | 490 | 2.14e-59 | 200 |
| MS.gene59995.t1 | AT1G33080 | 34.521 | 365 | 234 | 4 | 1 | 364 | 113 | 473 | 3.53e-59 | 199 |
| MS.gene59995.t1 | AT3G59030 | 39.519 | 291 | 170 | 3 | 3 | 291 | 130 | 416 | 6.27e-58 | 194 |
| MS.gene59995.t1 | AT5G19700 | 32.533 | 375 | 246 | 2 | 4 | 373 | 116 | 488 | 9.81e-57 | 193 |
| MS.gene59995.t1 | AT3G03620 | 33.693 | 371 | 233 | 7 | 3 | 368 | 116 | 478 | 1.30e-56 | 193 |
| MS.gene59995.t1 | AT3G03620 | 33.693 | 371 | 233 | 7 | 3 | 368 | 116 | 478 | 1.30e-56 | 193 |
| MS.gene59995.t1 | AT4G25640 | 34.301 | 379 | 237 | 4 | 1 | 375 | 111 | 481 | 1.82e-56 | 192 |
| MS.gene59995.t1 | AT4G25640 | 33.600 | 375 | 245 | 2 | 1 | 375 | 111 | 481 | 4.18e-56 | 192 |
| MS.gene59995.t1 | AT5G17700 | 32.888 | 374 | 238 | 7 | 1 | 369 | 111 | 476 | 6.39e-55 | 188 |
| MS.gene59995.t1 | AT5G17700 | 32.888 | 374 | 238 | 7 | 1 | 369 | 111 | 476 | 6.39e-55 | 188 |
| MS.gene59995.t1 | AT4G25640 | 34.639 | 332 | 205 | 4 | 1 | 328 | 111 | 434 | 8.10e-49 | 171 |
| MS.gene59995.t1 | AT4G22790 | 31.445 | 353 | 232 | 5 | 16 | 363 | 122 | 469 | 4.44e-45 | 162 |
| MS.gene59995.t1 | AT1G33110 | 32.877 | 292 | 191 | 4 | 1 | 291 | 113 | 400 | 2.53e-38 | 142 |
| MS.gene59995.t1 | AT2G04066 | 48.361 | 122 | 63 | 0 | 246 | 367 | 42 | 163 | 3.49e-36 | 130 |
| MS.gene59995.t1 | AT5G17700 | 31.419 | 296 | 190 | 7 | 1 | 291 | 111 | 398 | 2.97e-32 | 125 |
Find 88 sgRNAs with CRISPR-Local
Find 132 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATTAATGGTTCTCCTTTC+TGG | 0.099766 | 6.1:-72194957 | MS.gene59995:CDS |
| TTATACTAGTTCGTAATTTA+TGG | 0.163853 | 6.1:-72194485 | MS.gene59995:CDS |
| CCATTCCCCTTGCAATTATT+TGG | 0.198410 | 6.1:-72195598 | MS.gene59995:CDS |
| GGAATGCAAGCTGTTCTTTC+AGG | 0.202710 | 6.1:-72194378 | MS.gene59995:intron |
| ATGGCAAGCTTCAGGAAAAT+TGG | 0.241777 | 6.1:+72195203 | None:intergenic |
| GATGTTTCCAACTTTGGATT+TGG | 0.287173 | 6.1:+72194927 | None:intergenic |
| CAGTAGATATTTCATGATCT+TGG | 0.298876 | 6.1:+72195543 | None:intergenic |
| AATGTGGTCATTTGAATTAA+TGG | 0.315453 | 6.1:-72194970 | MS.gene59995:CDS |
| TAGCAAATTCTATATCCTAT+TGG | 0.316506 | 6.1:-72195325 | MS.gene59995:CDS |
| CATTCCCCTTGCAATTATTT+GGG | 0.329843 | 6.1:-72195597 | MS.gene59995:CDS |
| TCATCCACAGGCTGCGCGTT+TGG | 0.332304 | 6.1:-72194565 | MS.gene59995:CDS |
| AGCACAGATGTTTCCAACTT+TGG | 0.335573 | 6.1:+72194921 | None:intergenic |
| CTTGGATCATATTATTTAGT+TGG | 0.342797 | 6.1:-72194018 | MS.gene59995:CDS |
| TCTTCCTCTATGTTGGATAA+TGG | 0.343949 | 6.1:-72195384 | MS.gene59995:CDS |
| AAACATCTGTGCTTTCTATC+TGG | 0.352029 | 6.1:-72194911 | MS.gene59995:intron |
| CTGAAGGAATGGCAAGCTTC+AGG | 0.354381 | 6.1:+72195195 | None:intergenic |
| GGATGTGGTTGGCAGAAAAT+TGG | 0.357552 | 6.1:-72194054 | MS.gene59995:CDS |
| TATACTAGTTCGTAATTTAT+GGG | 0.361051 | 6.1:-72194484 | MS.gene59995:CDS |
| TGGCAGCTATGCTAAGTTAA+TGG | 0.362866 | 6.1:-72195516 | MS.gene59995:CDS |
| AGCAAATTCTATATCCTATT+GGG | 0.363479 | 6.1:-72195324 | MS.gene59995:CDS |
| TTCCTTCAGCTGTAATGGTT+TGG | 0.389688 | 6.1:-72195181 | MS.gene59995:intron |
| TGCCATTCCTTCAGCTGTAA+TGG | 0.395491 | 6.1:-72195186 | MS.gene59995:CDS |
| TTGGATCATATTATTTAGTT+GGG | 0.395886 | 6.1:-72194017 | MS.gene59995:CDS |
| TTTGACATAGAGTGCGAGTA+TGG | 0.397501 | 6.1:+72195292 | None:intergenic |
| TGGATAATGGTATACAAATC+TGG | 0.407031 | 6.1:-72195371 | MS.gene59995:CDS |
| ATGGTATACAAATCTGGATT+AGG | 0.419228 | 6.1:-72195365 | MS.gene59995:CDS |
| TAAATACAACAGCAGCTGTT+TGG | 0.423923 | 6.1:-72194801 | MS.gene59995:CDS |
| TCCAATGATGTTTAGCTCCT+CGG | 0.431966 | 6.1:-72195423 | MS.gene59995:CDS |
| TACTTCATCTTCCTCTATGT+TGG | 0.435862 | 6.1:-72195391 | MS.gene59995:CDS |
| GTAGAAGACCGAAAGCAAAA+AGG | 0.437826 | 6.1:+72195486 | None:intergenic |
| TCATTACAATACGCACTGAT+TGG | 0.438717 | 6.1:-72193809 | MS.gene59995:CDS |
| GTTCAGCGCAAGTGCTTCCT+TGG | 0.439233 | 6.1:+72195232 | None:intergenic |
| CTCCTTCATGTAAGAAAACA+TGG | 0.439623 | 6.1:-72195265 | MS.gene59995:CDS |
| TAATACAGGGCTTGTGGCTA+GGG | 0.443775 | 6.1:-72193872 | MS.gene59995:intron |
| ACCGAGGAGCTAAACATCAT+TGG | 0.444954 | 6.1:+72195422 | None:intergenic |
| TATGGTAACATTCACCCAAT+AGG | 0.446841 | 6.1:+72195310 | None:intergenic |
| TGGCAAGCTTCAGGAAAATT+GGG | 0.459148 | 6.1:+72195204 | None:intergenic |
| TCTTCTTCCAAATCCAAAGT+TGG | 0.461674 | 6.1:-72194934 | MS.gene59995:CDS |
| AAGTGGGATACGGCAAGAAT+TGG | 0.472050 | 6.1:+72194408 | None:intergenic |
| ATAATACAGGGCTTGTGGCT+AGG | 0.477350 | 6.1:-72193873 | MS.gene59995:intron |
| ATTCGTGTTTCGAATGAACT+TGG | 0.485317 | 6.1:-72194594 | MS.gene59995:CDS |
| GCCGTATCCCACTTACTAGA+TGG | 0.486822 | 6.1:-72194399 | MS.gene59995:CDS |
| CCAAATAATTGCAAGGGGAA+TGG | 0.488931 | 6.1:+72195598 | None:intergenic |
| CATGAAATATCTACTGAAGC+TGG | 0.490884 | 6.1:-72195536 | MS.gene59995:CDS |
| GACTAAGATGCTCTCAATAA+CGG | 0.495838 | 6.1:+72194518 | None:intergenic |
| CATTACAATACGCACTGATT+GGG | 0.497991 | 6.1:-72193808 | MS.gene59995:CDS |
| AAAGCAGTACCGCATATGTC+AGG | 0.498154 | 6.1:-72195662 | None:intergenic |
| CTTGCATTCCATCTAGTAAG+TGG | 0.503895 | 6.1:+72194391 | None:intergenic |
| TCGGACTCAGTGGAGCTGTA+AGG | 0.506674 | 6.1:-72194768 | MS.gene59995:intron |
| AAAGCGAATACAATGGCTGC+TGG | 0.511302 | 6.1:+72193991 | None:intergenic |
| GCTGTTTGGATGATCCCCTT+CGG | 0.512079 | 6.1:-72194787 | MS.gene59995:CDS |
| TTGGCCAAGTAAAATGAGAA+TGG | 0.519826 | 6.1:+72195562 | None:intergenic |
| TCAGGCACTGCTAGAGGATG+TGG | 0.519915 | 6.1:-72194069 | MS.gene59995:intron |
| ATTGGCGCGTTTGTCAACCT+TGG | 0.521965 | 6.1:-72194036 | MS.gene59995:CDS |
| AACCATTACAGCTGAAGGAA+TGG | 0.525701 | 6.1:+72195184 | None:intergenic |
| TATACCATTATCCAACATAG+AGG | 0.541601 | 6.1:+72195380 | None:intergenic |
| TCCATCTAGTAAGTGGGATA+CGG | 0.545689 | 6.1:+72194398 | None:intergenic |
| ACGCACTGATTGGGAGAAAG+AGG | 0.546750 | 6.1:-72193799 | MS.gene59995:intron |
| TCATGTAAGAAAACATGGAA+TGG | 0.547867 | 6.1:-72195260 | MS.gene59995:CDS |
| TGCACTACATATTGGCGGGA+AGG | 0.548620 | 6.1:-72193968 | MS.gene59995:intron |
| TATTTATAATACAGGGCTTG+TGG | 0.551679 | 6.1:-72193878 | MS.gene59995:intron |
| GTTTCGAATGAACTTGGTGC+TGG | 0.552325 | 6.1:-72194588 | MS.gene59995:CDS |
| TGTTTGCCCAAATAATTGCA+AGG | 0.556258 | 6.1:+72195591 | None:intergenic |
| TACCAAACCATTACAGCTGA+AGG | 0.556607 | 6.1:+72195179 | None:intergenic |
| CAACTAAATAATATGATCCA+AGG | 0.560535 | 6.1:+72194019 | None:intergenic |
| ATACTAGTTCGTAATTTATG+GGG | 0.564636 | 6.1:-72194483 | MS.gene59995:CDS |
| CGACGAGCAGCTTGGAAATG+TGG | 0.567864 | 6.1:-72194986 | MS.gene59995:intron |
| GTTTGCCCAAATAATTGCAA+GGG | 0.573339 | 6.1:+72195592 | None:intergenic |
| ACAGCCAAACGCGCAGCCTG+TGG | 0.582591 | 6.1:+72194561 | None:intergenic |
| TACAGCTCCACTGAGTCCGA+AGG | 0.583200 | 6.1:+72194771 | None:intergenic |
| ACTTGGTGCTGGTCATCCAC+AGG | 0.587929 | 6.1:-72194577 | MS.gene59995:CDS |
| TATGGTTCAGGCACTGCTAG+AGG | 0.596856 | 6.1:-72194075 | MS.gene59995:intron |
| ATAGGATATAGAATTTGCTA+TGG | 0.597838 | 6.1:+72195328 | None:intergenic |
| ACAGCTCCACTGAGTCCGAA+GGG | 0.602693 | 6.1:+72194772 | None:intergenic |
| TGAGAGCATCTTAGTCGGAA+CGG | 0.605010 | 6.1:-72194511 | MS.gene59995:CDS |
| AAATCTGGATTAGGCAGCAG+AGG | 0.606654 | 6.1:-72195356 | MS.gene59995:CDS |
| TTGCATTCCATCTAGTAAGT+GGG | 0.618025 | 6.1:+72194392 | None:intergenic |
| GATTTGGAAGAAGACCAGAA+AGG | 0.631676 | 6.1:+72194943 | None:intergenic |
| ATGATCCCCTTCGGACTCAG+TGG | 0.634889 | 6.1:-72194778 | MS.gene59995:CDS |
| GTTATTGAGAGCATCTTAGT+CGG | 0.638872 | 6.1:-72194516 | MS.gene59995:CDS |
| TTTGCCCAAATAATTGCAAG+GGG | 0.641308 | 6.1:+72195593 | None:intergenic |
| ATGAAGTAATGTTGTAACCG+AGG | 0.644303 | 6.1:+72195406 | None:intergenic |
| GACGATCATGAGAATGAACA+TGG | 0.663742 | 6.1:+72195622 | None:intergenic |
| GCACTGCTAGAGGATGTGGT+TGG | 0.664505 | 6.1:-72194065 | MS.gene59995:CDS |
| GACAAAGCGCTTGAACAACG+AGG | 0.670556 | 6.1:+72193838 | None:intergenic |
| TAGTGCAAAAGCGAATACAA+TGG | 0.671539 | 6.1:+72193984 | None:intergenic |
| CAGCTCCACTGAGTCCGAAG+GGG | 0.677876 | 6.1:+72194773 | None:intergenic |
| ACAAAGCGCTTGAACAACGA+GGG | 0.691240 | 6.1:+72193839 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTAATAAATATTTATAATAC+AGG | - | chr6.1:72195390-72195409 | MS.gene59995:CDS | 10.0% |
| !! | TATTATAAATATTTATTAGC+AGG | + | chr6.1:72195389-72195408 | None:intergenic | 10.0% |
| !!! | TTGTTTAATTACATTTTTTT+TGG | - | chr6.1:72194177-72194196 | MS.gene59995:intron | 10.0% |
| !! | AAAATAAAATCAAAAGTTGT+TGG | + | chr6.1:72194933-72194952 | None:intergenic | 15.0% |
| !! | AAATGAATCAGAAAATATAA+AGG | + | chr6.1:72195583-72195602 | None:intergenic | 15.0% |
| !!! | TTATTTTGTTCATAAGATTT+GGG | - | chr6.1:72194946-72194965 | MS.gene59995:CDS | 15.0% |
| !!! | TTTATTTTGTTCATAAGATT+TGG | - | chr6.1:72194945-72194964 | MS.gene59995:CDS | 15.0% |
| !! | CTAATATATCTGATACAAAA+AGG | - | chr6.1:72194999-72195018 | MS.gene59995:intron | 20.0% |
| !! | TATACTAGTTCGTAATTTAT+GGG | - | chr6.1:72194792-72194811 | MS.gene59995:CDS | 20.0% |
| !! | TTATACTAGTTCGTAATTTA+TGG | - | chr6.1:72194791-72194810 | MS.gene59995:CDS | 20.0% |
| !! | TTGGATCATATTATTTAGTT+GGG | - | chr6.1:72195259-72195278 | MS.gene59995:CDS | 20.0% |
| !!! | ATACAATATTTTGAGTTTGT+AGG | + | chr6.1:72193832-72193851 | None:intergenic | 20.0% |
| !!! | TAATTTTCTTAACCTTTTGT+TGG | - | chr6.1:72194433-72194452 | MS.gene59995:CDS | 20.0% |
| !!! | TACAAAAAGGTAACTAATTT+TGG | - | chr6.1:72195012-72195031 | MS.gene59995:intron | 20.0% |
| ! | AAAATCGCTATCATAAGATT+TGG | - | chr6.1:72195358-72195377 | MS.gene59995:CDS | 25.0% |
| ! | AAACTAAAGAAAGAAAGAGA+AGG | + | chr6.1:72194621-72194640 | None:intergenic | 25.0% |
| ! | AATGTGGTCATTTGAATTAA+TGG | - | chr6.1:72194306-72194325 | MS.gene59995:intron | 25.0% |
| ! | AGCAAATTCTATATCCTATT+GGG | - | chr6.1:72193952-72193971 | MS.gene59995:intron | 25.0% |
| ! | ATACTAGTTCGTAATTTATG+GGG | - | chr6.1:72194793-72194812 | MS.gene59995:CDS | 25.0% |
| ! | CAACTAAATAATATGATCCA+AGG | + | chr6.1:72195260-72195279 | None:intergenic | 25.0% |
| ! | CTTGGATCATATTATTTAGT+TGG | - | chr6.1:72195258-72195277 | MS.gene59995:CDS | 25.0% |
| ! | TAACAAAGAGAAAAAAGCTT+TGG | + | chr6.1:72194580-72194599 | None:intergenic | 25.0% |
| ! | TAGCAAATTCTATATCCTAT+TGG | - | chr6.1:72193951-72193970 | MS.gene59995:intron | 25.0% |
| ! | TAGGCTTAAGTTAAATAGTA+AGG | + | chr6.1:72194551-72194570 | None:intergenic | 25.0% |
| !! | ATTTTGTATTTTGCTCTCTA+TGG | - | chr6.1:72195183-72195202 | MS.gene59995:CDS | 25.0% |
| !! | TTTTCTGATTCATTTTGTAC+AGG | - | chr6.1:72195588-72195607 | MS.gene59995:CDS | 25.0% |
| !!! | AAAAAAGCTTTGGAGAATTT+AGG | + | chr6.1:72194570-72194589 | None:intergenic | 25.0% |
| !!! | ATAGGATATAGAATTTGCTA+TGG | + | chr6.1:72193951-72193970 | None:intergenic | 25.0% |
| AATATTCATGTGATGCATTG+TGG | - | chr6.1:72195545-72195564 | MS.gene59995:CDS | 30.0% | |
| ATATTCATGTGATGCATTGT+GGG | - | chr6.1:72195546-72195565 | MS.gene59995:CDS | 30.0% | |
| ATGGTATACAAATCTGGATT+AGG | - | chr6.1:72193911-72193930 | MS.gene59995:intron | 30.0% | |
| ATGTAACAATAATGTCGAAG+AGG | + | chr6.1:72194410-72194429 | None:intergenic | 30.0% | |
| CAGTAGATATTTCATGATCT+TGG | + | chr6.1:72193736-72193755 | None:intergenic | 30.0% | |
| GCATCTCTAACACTTATTAT+TGG | - | chr6.1:72195145-72195164 | MS.gene59995:intron | 30.0% | |
| TATACCATTATCCAACATAG+AGG | + | chr6.1:72193899-72193918 | None:intergenic | 30.0% | |
| TATTTATAATACAGGGCTTG+TGG | - | chr6.1:72195398-72195417 | MS.gene59995:CDS | 30.0% | |
| TCATGTAAGAAAACATGGAA+TGG | - | chr6.1:72194016-72194035 | MS.gene59995:CDS | 30.0% | |
| ! | AGATCCATTCTCATTTTACT+TGG | - | chr6.1:72193710-72193729 | MS.gene59995:intron | 30.0% |
| ! | TAGCGATTTTCATGAAAGAA+AGG | + | chr6.1:72195348-72195367 | None:intergenic | 30.0% |
| ! | TGGATAATGGTATACAAATC+TGG | - | chr6.1:72193905-72193924 | MS.gene59995:intron | 30.0% |
| ! | TTCCATGTTTTCTTACATGA+AGG | + | chr6.1:72194016-72194035 | None:intergenic | 30.0% |
| AAACATCTGTGCTTTCTATC+TGG | - | chr6.1:72194365-72194384 | MS.gene59995:intron | 35.0% | |
| ATGAAGTAATGTTGTAACCG+AGG | + | chr6.1:72193873-72193892 | None:intergenic | 35.0% | |
| ATTCGTGTTTCGAATGAACT+TGG | - | chr6.1:72194682-72194701 | MS.gene59995:intron | 35.0% | |
| CATGAAATATCTACTGAAGC+TGG | - | chr6.1:72193740-72193759 | MS.gene59995:intron | 35.0% | |
| CATTCCCCTTGCAATTATTT+GGG | - | chr6.1:72193679-72193698 | MS.gene59995:intron | 35.0% | |
| CTCCTTCATGTAAGAAAACA+TGG | - | chr6.1:72194011-72194030 | MS.gene59995:CDS | 35.0% | |
| GAATTAATGGTTCTCCTTTC+TGG | - | chr6.1:72194319-72194338 | MS.gene59995:intron | 35.0% | |
| GACTAAGATGCTCTCAATAA+CGG | + | chr6.1:72194761-72194780 | None:intergenic | 35.0% | |
| GATGTTTCCAACTTTGGATT+TGG | + | chr6.1:72194352-72194371 | None:intergenic | 35.0% | |
| GTTTGCCCAAATAATTGCAA+GGG | + | chr6.1:72193687-72193706 | None:intergenic | 35.0% | |
| TAAACAACAGTCATCGAAGT+TGG | - | chr6.1:72195123-72195142 | MS.gene59995:intron | 35.0% | |
| TAAATACAACAGCAGCTGTT+TGG | - | chr6.1:72194475-72194494 | MS.gene59995:CDS | 35.0% | |
| TACTTCATCTTCCTCTATGT+TGG | - | chr6.1:72193885-72193904 | MS.gene59995:intron | 35.0% | |
| TAGTGCAAAAGCGAATACAA+TGG | + | chr6.1:72195295-72195314 | None:intergenic | 35.0% | |
| TATGGTAACATTCACCCAAT+AGG | + | chr6.1:72193969-72193988 | None:intergenic | 35.0% | |
| TATTCATGTGATGCATTGTG+GGG | - | chr6.1:72195547-72195566 | MS.gene59995:CDS | 35.0% | |
| TCTTCCTCTATGTTGGATAA+TGG | - | chr6.1:72193892-72193911 | MS.gene59995:intron | 35.0% | |
| TCTTCTTCCAAATCCAAAGT+TGG | - | chr6.1:72194342-72194361 | MS.gene59995:intron | 35.0% | |
| TGTTTGCCCAAATAATTGCA+AGG | + | chr6.1:72193688-72193707 | None:intergenic | 35.0% | |
| TTAGAAGTTCACGTATGTCT+CGG | + | chr6.1:72194983-72195002 | None:intergenic | 35.0% | |
| TTGCATTCCATCTAGTAAGT+GGG | + | chr6.1:72194887-72194906 | None:intergenic | 35.0% | |
| TTGGCCAAGTAAAATGAGAA+TGG | + | chr6.1:72193717-72193736 | None:intergenic | 35.0% | |
| TTTGCCCAAATAATTGCAAG+GGG | + | chr6.1:72193686-72193705 | None:intergenic | 35.0% | |
| ! | AACATGGAATGGTTTTTCCA+AGG | - | chr6.1:72194027-72194046 | MS.gene59995:CDS | 35.0% |
| ! | TATTTTGCTCTCTATGGTTC+AGG | - | chr6.1:72195189-72195208 | MS.gene59995:CDS | 35.0% |
| ! | TCATTACAATACGCACTGAT+TGG | - | chr6.1:72195467-72195486 | MS.gene59995:CDS | 35.0% |
| ! | TCATTTTGTACAGGCAAAGA+AGG | - | chr6.1:72195597-72195616 | MS.gene59995:CDS | 35.0% |
| !! | CATTACAATACGCACTGATT+GGG | - | chr6.1:72195468-72195487 | MS.gene59995:CDS | 35.0% |
| !! | GTTATTGAGAGCATCTTAGT+CGG | - | chr6.1:72194760-72194779 | MS.gene59995:intron | 35.0% |
| !! | TTCGCTTTTGCACTACATAT+TGG | - | chr6.1:72195300-72195319 | MS.gene59995:CDS | 35.0% |
| !!! | TTAACCTTTTGTTGGTGACT+TGG | - | chr6.1:72194441-72194460 | MS.gene59995:CDS | 35.0% |
| AACCATTACAGCTGAAGGAA+TGG | + | chr6.1:72194095-72194114 | None:intergenic | 40.0% | |
| AGAACCAAGTCACCAACAAA+AGG | + | chr6.1:72194448-72194467 | None:intergenic | 40.0% | |
| AGCACAGATGTTTCCAACTT+TGG | + | chr6.1:72194358-72194377 | None:intergenic | 40.0% | |
| ATCTGTGCTTTCTATCTGGT+TGG | - | chr6.1:72194369-72194388 | MS.gene59995:intron | 40.0% | |
| ATGGCAAGCTTCAGGAAAAT+TGG | + | chr6.1:72194076-72194095 | None:intergenic | 40.0% | |
| CCAAATAATTGCAAGGGGAA+TGG | + | chr6.1:72193681-72193700 | None:intergenic | 40.0% | |
| CCATTCCCCTTGCAATTATT+TGG | - | chr6.1:72193678-72193697 | MS.gene59995:intron | 40.0% | |
| CTTGCATTCCATCTAGTAAG+TGG | + | chr6.1:72194888-72194907 | None:intergenic | 40.0% | |
| GACGATCATGAGAATGAACA+TGG | + | chr6.1:72193657-72193676 | None:intergenic | 40.0% | |
| GAGCTGTAAGGTTTGAATAC+AGG | - | chr6.1:72194520-72194539 | MS.gene59995:CDS | 40.0% | |
| GATTTGGAAGAAGACCAGAA+AGG | + | chr6.1:72194336-72194355 | None:intergenic | 40.0% | |
| GTAGAAGACCGAAAGCAAAA+AGG | + | chr6.1:72193793-72193812 | None:intergenic | 40.0% | |
| TACCAAACCATTACAGCTGA+AGG | + | chr6.1:72194100-72194119 | None:intergenic | 40.0% | |
| TCCATCTAGTAAGTGGGATA+CGG | + | chr6.1:72194881-72194900 | None:intergenic | 40.0% | |
| TGGCAAGCTTCAGGAAAATT+GGG | + | chr6.1:72194075-72194094 | None:intergenic | 40.0% | |
| TGGCAGCTATGCTAAGTTAA+TGG | - | chr6.1:72193760-72193779 | MS.gene59995:intron | 40.0% | |
| TTCCTTCAGCTGTAATGGTT+TGG | - | chr6.1:72194095-72194114 | MS.gene59995:intron | 40.0% | |
| TTTGACATAGAGTGCGAGTA+TGG | + | chr6.1:72193987-72194006 | None:intergenic | 40.0% | |
| ! | CTTTTGCACTACATATTGGC+GGG | - | chr6.1:72195304-72195323 | MS.gene59995:CDS | 40.0% |
| ! | GCTTTTGCACTACATATTGG+CGG | - | chr6.1:72195303-72195322 | MS.gene59995:CDS | 40.0% |
| ! | TCCAATGATGTTTAGCTCCT+CGG | - | chr6.1:72193853-72193872 | MS.gene59995:CDS | 40.0% |
| AAAGCGAATACAATGGCTGC+TGG | + | chr6.1:72195288-72195307 | None:intergenic | 45.0% | |
| AAGACCGAAAGCAAAAAGGC+AGG | + | chr6.1:72193789-72193808 | None:intergenic | 45.0% | |
| AAGTGGGATACGGCAAGAAT+TGG | + | chr6.1:72194871-72194890 | None:intergenic | 45.0% | |
| ACCGAGGAGCTAAACATCAT+TGG | + | chr6.1:72193857-72193876 | None:intergenic | 45.0% | |
| AGACCGAAAGCAAAAAGGCA+GGG | + | chr6.1:72193788-72193807 | None:intergenic | 45.0% | |
| ATAATACAGGGCTTGTGGCT+AGG | - | chr6.1:72195403-72195422 | MS.gene59995:CDS | 45.0% | |
| GGAATGCAAGCTGTTCTTTC+AGG | - | chr6.1:72194898-72194917 | MS.gene59995:intron | 45.0% | |
| GGATGTGGTTGGCAGAAAAT+TGG | - | chr6.1:72195222-72195241 | MS.gene59995:CDS | 45.0% | |
| GTCGCGACGAGGAAAAAAAA+AGG | + | chr6.1:72194274-72194293 | None:intergenic | 45.0% | |
| TAATACAGGGCTTGTGGCTA+GGG | - | chr6.1:72195404-72195423 | MS.gene59995:CDS | 45.0% | |
| TGCCATTCCTTCAGCTGTAA+TGG | - | chr6.1:72194090-72194109 | MS.gene59995:intron | 45.0% | |
| ! | AAATCTGGATTAGGCAGCAG+AGG | - | chr6.1:72193920-72193939 | MS.gene59995:intron | 45.0% |
| ! | ACAAAGCGCTTGAACAACGA+GGG | + | chr6.1:72195440-72195459 | None:intergenic | 45.0% |
| ! | GTTCCCTGCCTTTTTGCTTT+CGG | - | chr6.1:72193782-72193801 | MS.gene59995:intron | 45.0% |
| !! | GTTTCGAATGAACTTGGTGC+TGG | - | chr6.1:72194688-72194707 | MS.gene59995:intron | 45.0% |
| !! | TGAGAGCATCTTAGTCGGAA+CGG | - | chr6.1:72194765-72194784 | MS.gene59995:intron | 45.0% |
| !! | TAATAAATATTTATAATACA+GGG | - | chr6.1:72195391-72195410 | MS.gene59995:CDS | 5.0% |
| ATTGGCGCGTTTGTCAACCT+TGG | - | chr6.1:72195240-72195259 | MS.gene59995:CDS | 50.0% | |
| CTGAAGGAATGGCAAGCTTC+AGG | + | chr6.1:72194084-72194103 | None:intergenic | 50.0% | |
| GCCGTATCCCACTTACTAGA+TGG | - | chr6.1:72194877-72194896 | MS.gene59995:intron | 50.0% | |
| GCTGTTTGGATGATCCCCTT+CGG | - | chr6.1:72194489-72194508 | MS.gene59995:CDS | 50.0% | |
| TGCACTACATATTGGCGGGA+AGG | - | chr6.1:72195308-72195327 | MS.gene59995:CDS | 50.0% | |
| ! | GACAAAGCGCTTGAACAACG+AGG | + | chr6.1:72195441-72195460 | None:intergenic | 50.0% |
| ! | TATGGTTCAGGCACTGCTAG+AGG | - | chr6.1:72195201-72195220 | MS.gene59995:CDS | 50.0% |
| !! | ACGCACTGATTGGGAGAAAG+AGG | - | chr6.1:72195477-72195496 | MS.gene59995:CDS | 50.0% |
| ACAGCTCCACTGAGTCCGAA+GGG | + | chr6.1:72194507-72194526 | None:intergenic | 55.0% | |
| ATGATCCCCTTCGGACTCAG+TGG | - | chr6.1:72194498-72194517 | MS.gene59995:CDS | 55.0% | |
| CGACGAGCAGCTTGGAAATG+TGG | - | chr6.1:72194290-72194309 | MS.gene59995:intron | 55.0% | |
| GCACTGCTAGAGGATGTGGT+TGG | - | chr6.1:72195211-72195230 | MS.gene59995:CDS | 55.0% | |
| GTTCAGCGCAAGTGCTTCCT+TGG | + | chr6.1:72194047-72194066 | None:intergenic | 55.0% | |
| TACAGCTCCACTGAGTCCGA+AGG | + | chr6.1:72194508-72194527 | None:intergenic | 55.0% | |
| TCGGACTCAGTGGAGCTGTA+AGG | - | chr6.1:72194508-72194527 | MS.gene59995:CDS | 55.0% | |
| ! | TCAGGCACTGCTAGAGGATG+TGG | - | chr6.1:72195207-72195226 | MS.gene59995:CDS | 55.0% |
| !! | ACTTGGTGCTGGTCATCCAC+AGG | - | chr6.1:72194699-72194718 | MS.gene59995:intron | 55.0% |
| CAGCTCCACTGAGTCCGAAG+GGG | + | chr6.1:72194506-72194525 | None:intergenic | 60.0% | |
| TCATCCACAGGCTGCGCGTT+TGG | - | chr6.1:72194711-72194730 | MS.gene59995:intron | 60.0% | |
| ACAGCCAAACGCGCAGCCTG+TGG | + | chr6.1:72194718-72194737 | None:intergenic | 65.0% | |
| CCAAGCTGCTCGTCGCGACG+AGG | + | chr6.1:72194285-72194304 | None:intergenic | 70.0% | |
| CCTCGTCGCGACGAGCAGCT+TGG | - | chr6.1:72194282-72194301 | MS.gene59995:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 72193629 | 72195669 | 72193629 | ID=MS.gene59995 |
| chr6.1 | mRNA | 72193629 | 72195669 | 72193629 | ID=MS.gene59995.t1;Parent=MS.gene59995 |
| chr6.1 | exon | 72195182 | 72195669 | 72195182 | ID=MS.gene59995.t1.exon1;Parent=MS.gene59995.t1 |
| chr6.1 | CDS | 72195182 | 72195669 | 72195182 | ID=cds.MS.gene59995.t1;Parent=MS.gene59995.t1 |
| chr6.1 | exon | 72194912 | 72194998 | 72194912 | ID=MS.gene59995.t1.exon2;Parent=MS.gene59995.t1 |
| chr6.1 | CDS | 72194912 | 72194998 | 72194912 | ID=cds.MS.gene59995.t1;Parent=MS.gene59995.t1 |
| chr6.1 | exon | 72194769 | 72194825 | 72194769 | ID=MS.gene59995.t1.exon3;Parent=MS.gene59995.t1 |
| chr6.1 | CDS | 72194769 | 72194825 | 72194769 | ID=cds.MS.gene59995.t1;Parent=MS.gene59995.t1 |
| chr6.1 | exon | 72194379 | 72194617 | 72194379 | ID=MS.gene59995.t1.exon4;Parent=MS.gene59995.t1 |
| chr6.1 | CDS | 72194379 | 72194617 | 72194379 | ID=cds.MS.gene59995.t1;Parent=MS.gene59995.t1 |
| chr6.1 | exon | 72193969 | 72194087 | 72193969 | ID=MS.gene59995.t1.exon5;Parent=MS.gene59995.t1 |
| chr6.1 | CDS | 72193969 | 72194087 | 72193969 | ID=cds.MS.gene59995.t1;Parent=MS.gene59995.t1 |
| chr6.1 | exon | 72193800 | 72193886 | 72193800 | ID=MS.gene59995.t1.exon6;Parent=MS.gene59995.t1 |
| chr6.1 | CDS | 72193800 | 72193886 | 72193800 | ID=cds.MS.gene59995.t1;Parent=MS.gene59995.t1 |
| chr6.1 | exon | 72193629 | 72193688 | 72193629 | ID=MS.gene59995.t1.exon7;Parent=MS.gene59995.t1 |
| chr6.1 | CDS | 72193629 | 72193688 | 72193629 | ID=cds.MS.gene59995.t1;Parent=MS.gene59995.t1 |
| Gene Sequence |
| Protein sequence |
