Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05335.t1 | XP_013452945.1 | 95.2 | 397 | 19 | 0 | 1 | 397 | 84 | 480 | 1.50E-208 | 735.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05335.t1 | Q9FHB6 | 68.3 | 388 | 121 | 1 | 2 | 389 | 85 | 470 | 1.7e-152 | 540.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05335.t1 | A0A072UD23 | 95.2 | 397 | 19 | 0 | 1 | 397 | 84 | 480 | 1.1e-208 | 735.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051525 | MS.gene05335 | 0.817464 | 3.25E-52 | -1.69E-46 |
| MS.gene052346 | MS.gene05335 | 0.817865 | 2.64E-52 | -1.69E-46 |
| MS.gene052414 | MS.gene05335 | 0.805718 | 1.17E-49 | -1.69E-46 |
| MS.gene052999 | MS.gene05335 | 0.805302 | 1.43E-49 | -1.69E-46 |
| MS.gene053169 | MS.gene05335 | 0.834355 | 3.14E-56 | -1.69E-46 |
| MS.gene05335 | MS.gene054010 | 0.810886 | 9.22E-51 | -1.69E-46 |
| MS.gene05335 | MS.gene054012 | 0.800342 | 1.51E-48 | -1.69E-46 |
| MS.gene05335 | MS.gene054556 | 0.834225 | 3.39E-56 | -1.69E-46 |
| MS.gene05335 | MS.gene055741 | 0.823933 | 1.06E-53 | -1.69E-46 |
| MS.gene05335 | MS.gene055744 | 0.827989 | 1.15E-54 | -1.69E-46 |
| MS.gene05335 | MS.gene055909 | 0.824741 | 6.85E-54 | -1.69E-46 |
| MS.gene05335 | MS.gene055911 | 0.827629 | 1.41E-54 | -1.69E-46 |
| MS.gene05335 | MS.gene057019 | 0.825109 | 5.61E-54 | -1.69E-46 |
| MS.gene05335 | MS.gene058376 | 0.810237 | 1.27E-50 | -1.69E-46 |
| MS.gene05335 | MS.gene058700 | 0.833573 | 4.93E-56 | -1.69E-46 |
| MS.gene05335 | MS.gene059420 | 0.817382 | 3.40E-52 | -1.69E-46 |
| MS.gene05335 | MS.gene060372 | 0.835387 | 1.73E-56 | -1.69E-46 |
| MS.gene05335 | MS.gene060401 | 0.813943 | 1.98E-51 | -1.69E-46 |
| MS.gene05335 | MS.gene060837 | 0.819377 | 1.20E-52 | -1.69E-46 |
| MS.gene05335 | MS.gene061154 | 0.817195 | 3.74E-52 | -1.69E-46 |
| MS.gene05335 | MS.gene062227 | 0.806849 | 6.74E-50 | -1.69E-46 |
| MS.gene05335 | MS.gene064237 | 0.804594 | 2.00E-49 | -1.69E-46 |
| MS.gene05335 | MS.gene065130 | 0.820427 | 6.90E-53 | -1.69E-46 |
| MS.gene05335 | MS.gene065699 | 0.810224 | 1.28E-50 | -1.69E-46 |
| MS.gene05335 | MS.gene065996 | 0.801373 | 9.29E-49 | -1.69E-46 |
| MS.gene05335 | MS.gene066406 | 0.809313 | 2.01E-50 | -1.69E-46 |
| MS.gene05335 | MS.gene066847 | 0.801777 | 7.67E-49 | -1.69E-46 |
| MS.gene05335 | MS.gene066850 | 0.807217 | 5.63E-50 | -1.69E-46 |
| MS.gene05335 | MS.gene069435 | 0.807754 | 4.33E-50 | -1.69E-46 |
| MS.gene05335 | MS.gene070279 | 0.81698 | 4.18E-52 | -1.69E-46 |
| MS.gene05335 | MS.gene070956 | 0.810759 | 9.82E-51 | -1.69E-46 |
| MS.gene05335 | MS.gene071060 | 0.812396 | 4.33E-51 | -1.69E-46 |
| MS.gene05335 | MS.gene072998 | 0.804522 | 2.08E-49 | -1.69E-46 |
| MS.gene05335 | MS.gene07366 | 0.826417 | 2.74E-54 | -1.69E-46 |
| MS.gene05335 | MS.gene09658 | 0.818374 | 2.03E-52 | -1.69E-46 |
| MS.gene05335 | MS.gene20025 | 0.807271 | 5.49E-50 | -1.69E-46 |
| MS.gene05335 | MS.gene20910 | 0.801444 | 8.98E-49 | -1.69E-46 |
| MS.gene05335 | MS.gene24611 | 0.842674 | 2.24E-58 | -1.69E-46 |
| MS.gene05335 | MS.gene25560 | 0.804054 | 2.60E-49 | -1.69E-46 |
| MS.gene05335 | MS.gene27100 | 0.817781 | 2.76E-52 | -1.69E-46 |
| MS.gene05335 | MS.gene28312 | 0.821437 | 4.04E-53 | -1.69E-46 |
| MS.gene05335 | MS.gene28990 | 0.816446 | 5.51E-52 | -1.69E-46 |
| MS.gene05335 | MS.gene32713 | 0.822886 | 1.86E-53 | -1.69E-46 |
| MS.gene05335 | MS.gene33072 | 0.822352 | 2.48E-53 | -1.69E-46 |
| MS.gene05335 | MS.gene35984 | 0.814129 | 1.80E-51 | -1.69E-46 |
| MS.gene05335 | MS.gene37919 | 0.843341 | 1.49E-58 | -1.69E-46 |
| MS.gene05335 | MS.gene38802 | 0.809978 | 1.45E-50 | -1.69E-46 |
| MS.gene05335 | MS.gene39051 | 0.817078 | 3.97E-52 | -1.69E-46 |
| MS.gene05335 | MS.gene39277 | 0.827319 | 1.67E-54 | -1.69E-46 |
| MS.gene05335 | MS.gene43482 | 0.812316 | 4.51E-51 | -1.69E-46 |
| MS.gene05335 | MS.gene43562 | 0.802002 | 6.90E-49 | -1.69E-46 |
| MS.gene05335 | MS.gene44558 | 0.816676 | 4.89E-52 | -1.69E-46 |
| MS.gene05335 | MS.gene44640 | 0.829058 | 6.36E-55 | -1.69E-46 |
| MS.gene05335 | MS.gene46956 | 0.823785 | 1.15E-53 | -1.69E-46 |
| MS.gene05335 | MS.gene47869 | 0.814361 | 1.60E-51 | -1.69E-46 |
| MS.gene05335 | MS.gene48585 | 0.853028 | 3.13E-61 | -1.69E-46 |
| MS.gene05335 | MS.gene49121 | 0.815147 | 1.07E-51 | -1.69E-46 |
| MS.gene05335 | MS.gene51922 | 0.812322 | 4.49E-51 | -1.69E-46 |
| MS.gene05335 | MS.gene52283 | 0.804832 | 1.79E-49 | -1.69E-46 |
| MS.gene05335 | MS.gene52324 | 0.850806 | 1.34E-60 | -1.69E-46 |
| MS.gene05335 | MS.gene56713 | 0.820609 | 6.27E-53 | -1.69E-46 |
| MS.gene05335 | MS.gene56808 | 0.80224 | 6.16E-49 | -1.69E-46 |
| MS.gene05335 | MS.gene57694 | 0.803106 | 4.08E-49 | -1.69E-46 |
| MS.gene05335 | MS.gene58345 | 0.811218 | 7.81E-51 | -1.69E-46 |
| MS.gene05335 | MS.gene59803 | 0.820034 | 8.49E-53 | -1.69E-46 |
| MS.gene05335 | MS.gene59995 | 0.86435 | 1.30E-64 | -1.69E-46 |
| MS.gene05335 | MS.gene61160 | 0.817342 | 3.47E-52 | -1.69E-46 |
| MS.gene05335 | MS.gene64266 | 0.835326 | 1.79E-56 | -1.69E-46 |
| MS.gene05335 | MS.gene65435 | 0.844657 | 6.60E-59 | -1.69E-46 |
| MS.gene05335 | MS.gene65859 | 0.803438 | 3.49E-49 | -1.69E-46 |
| MS.gene05335 | MS.gene67204 | 0.802988 | 4.32E-49 | -1.69E-46 |
| MS.gene05335 | MS.gene67422 | 0.801314 | 9.54E-49 | -1.69E-46 |
| MS.gene05335 | MS.gene70167 | 0.815002 | 1.16E-51 | -1.69E-46 |
| MS.gene05335 | MS.gene71287 | 0.804236 | 2.38E-49 | -1.69E-46 |
| MS.gene05335 | MS.gene71664 | 0.804343 | 2.26E-49 | -1.69E-46 |
| MS.gene05335 | MS.gene71666 | 0.812726 | 3.67E-51 | -1.69E-46 |
| MS.gene05335 | MS.gene71667 | 0.820601 | 6.29E-53 | -1.69E-46 |
| MS.gene05335 | MS.gene71836 | 0.818911 | 1.53E-52 | -1.69E-46 |
| MS.gene05335 | MS.gene72540 | 0.813841 | 2.09E-51 | -1.69E-46 |
| MS.gene05335 | MS.gene73665 | 0.814681 | 1.36E-51 | -1.69E-46 |
| MS.gene05335 | MS.gene74975 | -0.802047 | 6.75E-49 | -1.69E-46 |
| MS.gene05335 | MS.gene74992 | 0.809992 | 1.44E-50 | -1.69E-46 |
| MS.gene05335 | MS.gene75001 | 0.800494 | 1.40E-48 | -1.69E-46 |
| MS.gene05335 | MS.gene75014 | 0.830314 | 3.15E-55 | -1.69E-46 |
| MS.gene05335 | MS.gene75660 | 0.808388 | 3.17E-50 | -1.69E-46 |
| MS.gene05335 | MS.gene76141 | 0.818768 | 1.65E-52 | -1.69E-46 |
| MS.gene05335 | MS.gene76300 | 0.840651 | 7.65E-58 | -1.69E-46 |
| MS.gene05335 | MS.gene77474 | 0.809982 | 1.45E-50 | -1.69E-46 |
| MS.gene05335 | MS.gene77541 | 0.824832 | 6.52E-54 | -1.69E-46 |
| MS.gene05335 | MS.gene78643 | 0.808665 | 2.77E-50 | -1.69E-46 |
| MS.gene05335 | MS.gene79947 | 0.835418 | 1.70E-56 | -1.69E-46 |
| MS.gene05335 | MS.gene80172 | 0.822974 | 1.78E-53 | -1.69E-46 |
| MS.gene05335 | MS.gene81523 | 0.813563 | 2.40E-51 | -1.69E-46 |
| MS.gene05335 | MS.gene81877 | 0.88709 | 1.94E-72 | -1.69E-46 |
| MS.gene05335 | MS.gene84397 | 0.810758 | 9.83E-51 | -1.69E-46 |
| MS.gene05335 | MS.gene85059 | 0.811798 | 5.85E-51 | -1.69E-46 |
| MS.gene05335 | MS.gene86355 | 0.802312 | 5.96E-49 | -1.69E-46 |
| MS.gene05335 | MS.gene87888 | 0.82017 | 7.90E-53 | -1.69E-46 |
| MS.gene05335 | MS.gene88978 | 0.831586 | 1.53E-55 | -1.69E-46 |
| MS.gene05335 | MS.gene90462 | 0.824446 | 8.04E-54 | -1.69E-46 |
| MS.gene05335 | MS.gene90483 | 0.809593 | 1.75E-50 | -1.69E-46 |
| MS.gene05335 | MS.gene90950 | 0.809158 | 2.17E-50 | -1.69E-46 |
| MS.gene05335 | MS.gene91599 | 0.835695 | 1.45E-56 | -1.69E-46 |
| MS.gene05335 | MS.gene92064 | 0.801164 | 1.02E-48 | -1.69E-46 |
| MS.gene05335 | MS.gene92549 | 0.804415 | 2.18E-49 | -1.69E-46 |
| MS.gene05335 | MS.gene93043 | 0.814246 | 1.70E-51 | -1.69E-46 |
| MS.gene05335 | MS.gene94035 | 0.834956 | 2.22E-56 | -1.69E-46 |
| MS.gene05335 | MS.gene94064 | 0.817522 | 3.16E-52 | -1.69E-46 |
| MS.gene05335 | MS.gene94511 | 0.801611 | 8.30E-49 | -1.69E-46 |
| MS.gene05335 | MS.gene94682 | 0.804593 | 2.00E-49 | -1.69E-46 |
| MS.gene05335 | MS.gene98798 | 0.837253 | 5.80E-57 | -1.69E-46 |
| MS.gene05335 | MS.gene99674 | 0.821422 | 4.07E-53 | -1.69E-46 |
| MS.gene05335 | MS.gene99774 | 0.826539 | 2.57E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene05335 | MS.gene020465 | PPI |
| MS.gene05341 | MS.gene05335 | PPI |
| MS.gene05335 | MS.gene053097 | PPI |
| MS.gene05335 | MS.gene024208 | PPI |
| MS.gene05335 | MS.gene81884 | PPI |
| MS.gene05335 | MS.gene73451 | PPI |
| MS.gene05335 | MS.gene042353 | PPI |
| MS.gene05335 | MS.gene59999 | PPI |
| MS.gene05335 | MS.gene029501 | PPI |
| MS.gene05335 | MS.gene042358 | PPI |
| MS.gene05335 | MS.gene73453 | PPI |
| MS.gene05335 | MS.gene029498 | PPI |
| MS.gene05335 | MS.gene55012 | PPI |
| MS.gene05335 | MS.gene82778 | PPI |
| MS.gene05335 | MS.gene59995 | PPI |
| MS.gene05335 | MS.gene042352 | PPI |
| MS.gene71749 | MS.gene05335 | PPI |
| MS.gene032679 | MS.gene05335 | PPI |
| MS.gene05335 | MS.gene59997 | PPI |
| MS.gene81877 | MS.gene05335 | PPI |
| MS.gene05335 | MS.gene71750 | PPI |
| MS.gene042358 | MS.gene05335 | PPI |
| MS.gene05335 | MS.gene05336 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05335.t1 | MTR_6g081410 | 95.214 | 397 | 19 | 0 | 1 | 397 | 84 | 480 | 0.0 | 750 |
| MS.gene05335.t1 | MTR_6g081780 | 88.413 | 397 | 46 | 0 | 1 | 397 | 84 | 480 | 0.0 | 701 |
| MS.gene05335.t1 | MTR_6g066380 | 83.627 | 397 | 65 | 0 | 1 | 397 | 86 | 482 | 0.0 | 670 |
| MS.gene05335.t1 | MTR_6g081810 | 80.605 | 397 | 49 | 1 | 1 | 397 | 86 | 454 | 0.0 | 628 |
| MS.gene05335.t1 | MTR_6g081400 | 60.859 | 396 | 153 | 1 | 2 | 397 | 76 | 469 | 2.15e-176 | 500 |
| MS.gene05335.t1 | MTR_6g081390 | 63.198 | 394 | 143 | 1 | 4 | 397 | 75 | 466 | 6.73e-175 | 496 |
| MS.gene05335.t1 | MTR_8g106670 | 60.925 | 389 | 150 | 1 | 1 | 389 | 71 | 457 | 6.69e-169 | 481 |
| MS.gene05335.t1 | MTR_1g108810 | 60.000 | 380 | 150 | 1 | 1 | 380 | 93 | 470 | 2.31e-168 | 480 |
| MS.gene05335.t1 | MTR_6g081300 | 56.589 | 387 | 166 | 1 | 1 | 387 | 69 | 453 | 7.62e-157 | 450 |
| MS.gene05335.t1 | MTR_6g081240 | 57.143 | 378 | 160 | 1 | 1 | 378 | 69 | 444 | 7.33e-155 | 444 |
| MS.gene05335.t1 | MTR_6g081310 | 57.179 | 397 | 157 | 2 | 1 | 386 | 56 | 450 | 7.06e-153 | 440 |
| MS.gene05335.t1 | MTR_1g108840 | 51.546 | 388 | 186 | 1 | 1 | 388 | 100 | 485 | 8.56e-139 | 405 |
| MS.gene05335.t1 | MTR_6g004220 | 50.518 | 386 | 189 | 1 | 1 | 386 | 83 | 466 | 1.29e-138 | 404 |
| MS.gene05335.t1 | MTR_6g004220 | 50.529 | 378 | 185 | 1 | 1 | 378 | 90 | 465 | 2.61e-134 | 394 |
| MS.gene05335.t1 | MTR_1g108990 | 51.546 | 388 | 186 | 1 | 1 | 388 | 84 | 469 | 1.35e-133 | 391 |
| MS.gene05335.t1 | MTR_7g082810 | 47.859 | 397 | 205 | 1 | 1 | 397 | 79 | 473 | 1.56e-130 | 384 |
| MS.gene05335.t1 | MTR_7g082800 | 47.927 | 386 | 199 | 1 | 1 | 386 | 1 | 384 | 2.10e-128 | 375 |
| MS.gene05335.t1 | MTR_1g109060 | 49.357 | 389 | 195 | 1 | 1 | 389 | 83 | 469 | 5.36e-128 | 377 |
| MS.gene05335.t1 | MTR_1g109060 | 49.735 | 378 | 188 | 1 | 1 | 378 | 83 | 458 | 2.36e-124 | 368 |
| MS.gene05335.t1 | MTR_2g088400 | 43.557 | 388 | 217 | 1 | 1 | 388 | 111 | 496 | 4.55e-112 | 337 |
| MS.gene05335.t1 | MTR_4g048000 | 42.569 | 397 | 225 | 2 | 1 | 396 | 123 | 517 | 6.13e-108 | 327 |
| MS.gene05335.t1 | MTR_2g022980 | 42.711 | 391 | 219 | 2 | 1 | 388 | 107 | 495 | 9.42e-107 | 323 |
| MS.gene05335.t1 | MTR_6g004220 | 50.645 | 310 | 151 | 1 | 1 | 310 | 90 | 397 | 3.38e-106 | 320 |
| MS.gene05335.t1 | MTR_2g078930 | 41.282 | 390 | 220 | 3 | 1 | 385 | 102 | 487 | 2.66e-101 | 309 |
| MS.gene05335.t1 | MTR_2g078960 | 41.645 | 377 | 218 | 1 | 1 | 377 | 92 | 466 | 6.16e-100 | 305 |
| MS.gene05335.t1 | MTR_2g079020 | 39.698 | 398 | 231 | 3 | 1 | 393 | 96 | 489 | 8.93e-97 | 298 |
| MS.gene05335.t1 | MTR_2g088400 | 43.553 | 349 | 195 | 1 | 1 | 349 | 111 | 457 | 8.97e-97 | 296 |
| MS.gene05335.t1 | MTR_2g078970 | 38.131 | 396 | 240 | 2 | 1 | 393 | 90 | 483 | 5.28e-96 | 295 |
| MS.gene05335.t1 | MTR_8g063590 | 41.250 | 400 | 228 | 4 | 1 | 397 | 112 | 507 | 6.36e-92 | 286 |
| MS.gene05335.t1 | MTR_5g033100 | 40.206 | 388 | 229 | 2 | 1 | 388 | 115 | 499 | 6.60e-90 | 281 |
| MS.gene05335.t1 | MTR_1g021740 | 39.433 | 388 | 232 | 2 | 1 | 388 | 94 | 478 | 2.34e-89 | 278 |
| MS.gene05335.t1 | MTR_8g069470 | 39.119 | 386 | 232 | 2 | 1 | 386 | 109 | 491 | 1.03e-87 | 275 |
| MS.gene05335.t1 | MTR_7g087410 | 37.310 | 394 | 244 | 2 | 1 | 394 | 1 | 391 | 3.96e-86 | 267 |
| MS.gene05335.t1 | MTR_5g090290 | 38.481 | 395 | 241 | 1 | 1 | 395 | 105 | 497 | 4.32e-86 | 272 |
| MS.gene05335.t1 | MTR_5g067460 | 36.203 | 395 | 250 | 1 | 1 | 395 | 114 | 506 | 5.87e-86 | 272 |
| MS.gene05335.t1 | MTR_7g087410 | 37.310 | 394 | 244 | 2 | 1 | 394 | 90 | 480 | 5.17e-85 | 267 |
| MS.gene05335.t1 | MTR_7g087430 | 38.520 | 392 | 230 | 4 | 1 | 388 | 1 | 385 | 4.06e-84 | 262 |
| MS.gene05335.t1 | MTR_5g032720 | 37.594 | 399 | 238 | 4 | 1 | 391 | 95 | 490 | 4.32e-84 | 265 |
| MS.gene05335.t1 | MTR_5g032750 | 39.164 | 383 | 229 | 3 | 1 | 382 | 95 | 474 | 4.62e-80 | 254 |
| MS.gene05335.t1 | MTR_1g100180 | 37.629 | 388 | 238 | 3 | 1 | 388 | 102 | 485 | 8.70e-80 | 254 |
| MS.gene05335.t1 | MTR_7g087400 | 34.772 | 394 | 253 | 2 | 1 | 394 | 89 | 478 | 1.03e-79 | 253 |
| MS.gene05335.t1 | MTR_5g010830 | 34.625 | 387 | 245 | 3 | 1 | 384 | 124 | 505 | 1.01e-78 | 252 |
| MS.gene05335.t1 | MTR_3g111020 | 36.041 | 394 | 244 | 3 | 1 | 391 | 110 | 498 | 2.87e-78 | 251 |
| MS.gene05335.t1 | MTR_1g101500 | 33.247 | 385 | 249 | 3 | 1 | 382 | 123 | 502 | 1.15e-77 | 249 |
| MS.gene05335.t1 | MTR_6g004220 | 50.000 | 228 | 112 | 1 | 1 | 228 | 90 | 315 | 3.70e-75 | 237 |
| MS.gene05335.t1 | MTR_0039s0080 | 32.746 | 397 | 259 | 4 | 1 | 394 | 97 | 488 | 1.51e-74 | 241 |
| MS.gene05335.t1 | MTR_6g047640 | 36.176 | 387 | 243 | 2 | 1 | 387 | 90 | 472 | 4.35e-74 | 239 |
| MS.gene05335.t1 | MTR_6g047610 | 34.367 | 387 | 250 | 2 | 1 | 387 | 89 | 471 | 5.31e-74 | 238 |
| MS.gene05335.t1 | MTR_6g043810 | 34.085 | 399 | 236 | 3 | 1 | 382 | 82 | 470 | 2.15e-73 | 238 |
| MS.gene05335.t1 | MTR_7g087370 | 34.278 | 388 | 222 | 3 | 1 | 388 | 89 | 443 | 2.19e-73 | 236 |
| MS.gene05335.t1 | MTR_6g043810 | 34.085 | 399 | 236 | 3 | 1 | 382 | 92 | 480 | 3.18e-73 | 237 |
| MS.gene05335.t1 | MTR_6g047640 | 34.109 | 387 | 232 | 3 | 1 | 387 | 90 | 453 | 2.32e-72 | 234 |
| MS.gene05335.t1 | MTR_3g099700 | 35.279 | 394 | 251 | 3 | 1 | 393 | 105 | 495 | 5.00e-71 | 231 |
| MS.gene05335.t1 | MTR_2g078990 | 36.306 | 314 | 195 | 2 | 85 | 395 | 3 | 314 | 1.39e-70 | 224 |
| MS.gene05335.t1 | MTR_3g099720 | 33.756 | 394 | 258 | 2 | 1 | 394 | 100 | 490 | 2.81e-69 | 226 |
| MS.gene05335.t1 | MTR_6g027200 | 35.516 | 397 | 246 | 5 | 1 | 394 | 96 | 485 | 4.10e-69 | 226 |
| MS.gene05335.t1 | MTR_5g087930 | 35.013 | 397 | 233 | 6 | 1 | 395 | 85 | 458 | 9.20e-69 | 224 |
| MS.gene05335.t1 | MTR_4g027920 | 32.071 | 396 | 265 | 4 | 4 | 397 | 218 | 611 | 3.04e-66 | 221 |
| MS.gene05335.t1 | MTR_6g027190 | 34.447 | 389 | 249 | 3 | 1 | 388 | 84 | 467 | 2.44e-65 | 216 |
| MS.gene05335.t1 | MTR_6g047590 | 34.351 | 393 | 254 | 2 | 1 | 393 | 89 | 477 | 3.88e-65 | 215 |
| MS.gene05335.t1 | MTR_6g088805 | 32.225 | 391 | 255 | 3 | 4 | 389 | 89 | 474 | 7.20e-65 | 215 |
| MS.gene05335.t1 | MTR_8g102430 | 33.245 | 379 | 231 | 3 | 4 | 382 | 85 | 441 | 6.65e-63 | 209 |
| MS.gene05335.t1 | MTR_2g435930 | 28.250 | 400 | 273 | 2 | 1 | 386 | 78 | 477 | 4.09e-55 | 189 |
| MS.gene05335.t1 | MTR_5g090280 | 30.332 | 422 | 258 | 4 | 1 | 395 | 1 | 413 | 3.39e-54 | 185 |
| MS.gene05335.t1 | MTR_5g011540 | 32.234 | 394 | 264 | 3 | 1 | 393 | 102 | 493 | 2.24e-49 | 174 |
| MS.gene05335.t1 | MTR_2g079030 | 38.785 | 214 | 128 | 1 | 183 | 393 | 319 | 532 | 9.70e-48 | 171 |
| MS.gene05335.t1 | MTR_3g087820 | 53.333 | 75 | 35 | 0 | 59 | 133 | 48 | 122 | 1.19e-21 | 90.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05335.t1 | AT5G52450 | 67.259 | 394 | 127 | 1 | 2 | 395 | 85 | 476 | 0.0 | 546 |
| MS.gene05335.t1 | AT2G34360 | 63.496 | 389 | 132 | 4 | 2 | 389 | 86 | 465 | 0.0 | 515 |
| MS.gene05335.t1 | AT1G73700 | 62.785 | 395 | 145 | 1 | 2 | 396 | 83 | 475 | 2.27e-176 | 500 |
| MS.gene05335.t1 | AT2G34360 | 54.639 | 388 | 126 | 2 | 2 | 389 | 86 | 423 | 1.28e-152 | 438 |
| MS.gene05335.t1 | AT1G71140 | 50.259 | 386 | 190 | 1 | 1 | 386 | 84 | 467 | 2.55e-135 | 396 |
| MS.gene05335.t1 | AT1G15170 | 47.194 | 392 | 205 | 1 | 1 | 392 | 92 | 481 | 1.31e-130 | 384 |
| MS.gene05335.t1 | AT1G15160 | 45.592 | 397 | 211 | 2 | 1 | 394 | 89 | 483 | 5.03e-127 | 375 |
| MS.gene05335.t1 | AT1G15150 | 44.584 | 397 | 215 | 2 | 1 | 394 | 89 | 483 | 1.66e-125 | 371 |
| MS.gene05335.t1 | AT1G15180 | 47.959 | 392 | 202 | 1 | 1 | 392 | 93 | 482 | 4.11e-125 | 370 |
| MS.gene05335.t1 | AT2G04100 | 47.409 | 386 | 201 | 2 | 1 | 386 | 88 | 471 | 2.86e-123 | 365 |
| MS.gene05335.t1 | AT1G66760 | 45.876 | 388 | 208 | 1 | 1 | 388 | 86 | 471 | 6.29e-121 | 359 |
| MS.gene05335.t1 | AT1G15170 | 46.703 | 364 | 192 | 1 | 29 | 392 | 1 | 362 | 2.50e-120 | 353 |
| MS.gene05335.t1 | AT2G04100 | 47.354 | 378 | 197 | 2 | 1 | 378 | 88 | 463 | 4.50e-120 | 357 |
| MS.gene05335.t1 | AT2G04090 | 46.373 | 386 | 205 | 2 | 1 | 386 | 88 | 471 | 1.37e-119 | 355 |
| MS.gene05335.t1 | AT2G04040 | 46.193 | 394 | 207 | 2 | 1 | 394 | 85 | 473 | 3.87e-119 | 354 |
| MS.gene05335.t1 | AT2G04070 | 46.373 | 386 | 205 | 1 | 1 | 386 | 85 | 468 | 7.67e-119 | 353 |
| MS.gene05335.t1 | AT2G04080 | 45.685 | 394 | 209 | 3 | 1 | 394 | 85 | 473 | 1.33e-118 | 353 |
| MS.gene05335.t1 | AT2G04050 | 47.409 | 386 | 201 | 1 | 1 | 386 | 85 | 468 | 4.90e-118 | 352 |
| MS.gene05335.t1 | AT1G66760 | 46.032 | 378 | 202 | 1 | 1 | 378 | 86 | 461 | 6.18e-118 | 351 |
| MS.gene05335.t1 | AT1G15150 | 43.902 | 369 | 202 | 2 | 29 | 394 | 1 | 367 | 1.99e-115 | 341 |
| MS.gene05335.t1 | AT2G04080 | 45.526 | 380 | 205 | 2 | 1 | 380 | 85 | 462 | 4.44e-115 | 344 |
| MS.gene05335.t1 | AT1G66780 | 43.511 | 393 | 220 | 1 | 1 | 393 | 93 | 483 | 9.60e-113 | 338 |
| MS.gene05335.t1 | AT1G64820 | 42.526 | 388 | 221 | 1 | 1 | 388 | 87 | 472 | 2.04e-109 | 330 |
| MS.gene05335.t1 | AT1G61890 | 39.948 | 388 | 231 | 1 | 1 | 388 | 105 | 490 | 5.41e-107 | 324 |
| MS.gene05335.t1 | AT1G11670 | 38.636 | 396 | 241 | 1 | 1 | 396 | 108 | 501 | 1.86e-105 | 320 |
| MS.gene05335.t1 | AT3G21690 | 41.237 | 388 | 226 | 1 | 1 | 388 | 110 | 495 | 3.41e-105 | 320 |
| MS.gene05335.t1 | AT1G61890 | 40.000 | 380 | 226 | 1 | 1 | 380 | 105 | 482 | 9.20e-104 | 316 |
| MS.gene05335.t1 | AT1G66760 | 46.988 | 332 | 174 | 1 | 47 | 378 | 4 | 333 | 5.19e-103 | 308 |
| MS.gene05335.t1 | AT3G23550 | 41.910 | 377 | 217 | 1 | 1 | 377 | 89 | 463 | 2.49e-102 | 311 |
| MS.gene05335.t1 | AT3G23560 | 42.440 | 377 | 215 | 1 | 1 | 377 | 97 | 471 | 4.31e-102 | 311 |
| MS.gene05335.t1 | AT4G21903 | 40.000 | 395 | 235 | 1 | 1 | 395 | 1 | 393 | 4.42e-101 | 305 |
| MS.gene05335.t1 | AT4G21910 | 40.310 | 387 | 229 | 1 | 1 | 387 | 112 | 496 | 1.33e-100 | 308 |
| MS.gene05335.t1 | AT4G21910 | 40.310 | 387 | 229 | 1 | 1 | 387 | 112 | 496 | 1.33e-100 | 308 |
| MS.gene05335.t1 | AT4G21910 | 40.310 | 387 | 229 | 1 | 1 | 387 | 114 | 498 | 2.28e-100 | 307 |
| MS.gene05335.t1 | AT4G21910 | 40.310 | 387 | 229 | 1 | 1 | 387 | 114 | 498 | 2.28e-100 | 307 |
| MS.gene05335.t1 | AT4G21903 | 40.310 | 387 | 229 | 1 | 1 | 387 | 110 | 494 | 2.41e-99 | 305 |
| MS.gene05335.t1 | AT4G21903 | 40.476 | 378 | 223 | 1 | 1 | 378 | 110 | 485 | 1.18e-96 | 298 |
| MS.gene05335.t1 | AT3G59030 | 40.458 | 393 | 228 | 3 | 1 | 391 | 109 | 497 | 1.42e-94 | 292 |
| MS.gene05335.t1 | AT1G61890 | 39.542 | 349 | 209 | 1 | 1 | 349 | 105 | 451 | 1.92e-90 | 281 |
| MS.gene05335.t1 | AT1G66760 | 45.484 | 310 | 167 | 1 | 1 | 310 | 86 | 393 | 6.45e-90 | 277 |
| MS.gene05335.t1 | AT3G26590 | 36.856 | 388 | 242 | 2 | 1 | 388 | 1 | 385 | 8.69e-89 | 274 |
| MS.gene05335.t1 | AT3G26590 | 36.856 | 388 | 242 | 2 | 1 | 388 | 103 | 487 | 1.44e-87 | 274 |
| MS.gene05335.t1 | AT1G47530 | 38.402 | 388 | 236 | 2 | 1 | 388 | 1 | 385 | 2.78e-86 | 267 |
| MS.gene05335.t1 | AT1G15180 | 46.290 | 283 | 150 | 1 | 29 | 311 | 1 | 281 | 3.31e-86 | 268 |
| MS.gene05335.t1 | AT5G38030 | 36.598 | 388 | 243 | 2 | 1 | 388 | 103 | 487 | 1.11e-85 | 269 |
| MS.gene05335.t1 | AT1G47530 | 38.402 | 388 | 236 | 2 | 1 | 388 | 93 | 477 | 6.35e-85 | 267 |
| MS.gene05335.t1 | AT1G12950 | 36.598 | 388 | 243 | 2 | 1 | 388 | 125 | 509 | 9.54e-85 | 268 |
| MS.gene05335.t1 | AT1G23300 | 39.175 | 388 | 233 | 2 | 1 | 388 | 102 | 486 | 3.83e-84 | 266 |
| MS.gene05335.t1 | AT5G44050 | 36.761 | 389 | 242 | 3 | 1 | 388 | 98 | 483 | 1.42e-82 | 261 |
| MS.gene05335.t1 | AT1G58340 | 36.719 | 384 | 241 | 1 | 1 | 384 | 116 | 497 | 9.85e-80 | 255 |
| MS.gene05335.t1 | AT1G33090 | 37.975 | 395 | 240 | 4 | 1 | 394 | 94 | 484 | 1.99e-79 | 253 |
| MS.gene05335.t1 | AT5G65380 | 37.789 | 389 | 238 | 3 | 1 | 388 | 95 | 480 | 4.84e-78 | 249 |
| MS.gene05335.t1 | AT3G23560 | 42.258 | 310 | 177 | 1 | 1 | 310 | 97 | 404 | 1.37e-77 | 246 |
| MS.gene05335.t1 | AT1G33100 | 36.548 | 394 | 247 | 2 | 1 | 394 | 91 | 481 | 1.49e-77 | 248 |
| MS.gene05335.t1 | AT4G00350 | 35.309 | 388 | 247 | 2 | 1 | 388 | 146 | 529 | 2.27e-77 | 249 |
| MS.gene05335.t1 | AT2G38510 | 33.506 | 385 | 253 | 3 | 1 | 384 | 64 | 446 | 4.21e-76 | 244 |
| MS.gene05335.t1 | AT5G10420 | 35.949 | 395 | 249 | 3 | 1 | 394 | 96 | 487 | 4.85e-75 | 241 |
| MS.gene05335.t1 | AT1G33110 | 35.787 | 394 | 250 | 3 | 1 | 394 | 94 | 484 | 1.10e-74 | 241 |
| MS.gene05335.t1 | AT4G23030 | 35.938 | 384 | 238 | 3 | 4 | 384 | 94 | 472 | 6.70e-74 | 239 |
| MS.gene05335.t1 | AT1G33080 | 36.203 | 395 | 247 | 4 | 1 | 394 | 94 | 484 | 1.15e-73 | 238 |
| MS.gene05335.t1 | AT1G33080 | 36.719 | 384 | 238 | 4 | 1 | 383 | 94 | 473 | 3.37e-72 | 234 |
| MS.gene05335.t1 | AT4G29140 | 34.031 | 382 | 250 | 1 | 1 | 382 | 114 | 493 | 5.18e-71 | 232 |
| MS.gene05335.t1 | AT5G52050 | 33.594 | 384 | 249 | 3 | 4 | 382 | 96 | 478 | 3.40e-70 | 229 |
| MS.gene05335.t1 | AT1G71870 | 33.666 | 401 | 244 | 4 | 1 | 382 | 82 | 479 | 6.29e-69 | 226 |
| MS.gene05335.t1 | AT3G59030 | 40.645 | 310 | 182 | 1 | 1 | 310 | 109 | 416 | 1.48e-68 | 223 |
| MS.gene05335.t1 | AT3G03620 | 35.459 | 392 | 240 | 7 | 1 | 387 | 95 | 478 | 4.06e-68 | 224 |
| MS.gene05335.t1 | AT3G03620 | 35.459 | 392 | 240 | 7 | 1 | 387 | 95 | 478 | 4.06e-68 | 224 |
| MS.gene05335.t1 | AT4G25640 | 35.930 | 398 | 243 | 4 | 1 | 394 | 92 | 481 | 2.11e-67 | 221 |
| MS.gene05335.t1 | AT4G25640 | 35.930 | 398 | 243 | 4 | 1 | 394 | 92 | 481 | 6.34e-67 | 221 |
| MS.gene05335.t1 | AT5G17700 | 34.606 | 393 | 244 | 7 | 1 | 388 | 92 | 476 | 4.31e-66 | 218 |
| MS.gene05335.t1 | AT5G17700 | 34.606 | 393 | 244 | 7 | 1 | 388 | 92 | 476 | 4.31e-66 | 218 |
| MS.gene05335.t1 | AT5G49130 | 31.235 | 413 | 260 | 5 | 1 | 395 | 84 | 490 | 6.78e-66 | 218 |
| MS.gene05335.t1 | AT5G19700 | 32.242 | 397 | 262 | 2 | 1 | 392 | 94 | 488 | 1.17e-62 | 209 |
| MS.gene05335.t1 | AT4G25640 | 36.467 | 351 | 211 | 4 | 1 | 347 | 92 | 434 | 2.06e-59 | 200 |
| MS.gene05335.t1 | AT4G22790 | 30.729 | 384 | 262 | 3 | 1 | 382 | 88 | 469 | 2.52e-52 | 182 |
| MS.gene05335.t1 | AT1G33110 | 35.048 | 311 | 197 | 4 | 1 | 310 | 94 | 400 | 3.14e-49 | 171 |
| MS.gene05335.t1 | AT5G17700 | 33.333 | 315 | 197 | 7 | 1 | 310 | 92 | 398 | 1.43e-42 | 154 |
| MS.gene05335.t1 | AT2G04066 | 47.541 | 122 | 64 | 0 | 265 | 386 | 42 | 163 | 3.10e-35 | 128 |
Find 88 sgRNAs with CRISPR-Local
Find 138 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATACTAGTTCGTAATTTA+TGG | 0.139599 | 6.3:-75037411 | MS.gene05335:CDS |
| CTATTCCCCTCGCGATTATT+TGG | 0.190931 | 6.3:-75038571 | MS.gene05335:CDS |
| GAATTAATGGTTCTTCTTTC+GGG | 0.199172 | 6.3:-75037955 | MS.gene05335:CDS |
| TGAATTAATGGTTCTTCTTT+CGG | 0.201119 | 6.3:-75037956 | MS.gene05335:CDS |
| GGAATGCAAGCTGTTCTTTC+AGG | 0.202710 | 6.3:-75037304 | MS.gene05335:intron |
| ATGGCAAGCTTCAGGAAAAT+TGG | 0.241777 | 6.3:+75038176 | None:intergenic |
| GATGTTTCCAACTTTGGATT+TGG | 0.287173 | 6.3:+75037925 | None:intergenic |
| CAGTAGATATTTCATGATCT+TGG | 0.298876 | 6.3:+75038516 | None:intergenic |
| TATTCCCCTCGCGATTATTT+GGG | 0.313645 | 6.3:-75038570 | MS.gene05335:CDS |
| AATGTGGTCATTTGAATTAA+TGG | 0.315453 | 6.3:-75037968 | MS.gene05335:CDS |
| CTTGGATCATATTATTTAGT+TGG | 0.330742 | 6.3:-75036915 | MS.gene05335:CDS |
| AGCACAGATGTTTCCAACTT+TGG | 0.335573 | 6.3:+75037919 | None:intergenic |
| TCTTCCTCTATGTTGGATAA+TGG | 0.343949 | 6.3:-75038357 | MS.gene05335:CDS |
| AAACATCTGTGCTTTCTATC+TGG | 0.352029 | 6.3:-75037909 | MS.gene05335:intron |
| CTGAAGGAATGGCAAGCTTC+AGG | 0.354381 | 6.3:+75038168 | None:intergenic |
| TCATCCACAGGCTGCGCGTT+TGG | 0.355776 | 6.3:-75037491 | MS.gene05335:CDS |
| TGGCAGCTATGCTAAGTTAA+TGG | 0.362866 | 6.3:-75038489 | MS.gene05335:CDS |
| GATACTAGTTCGTAATTTAT+GGG | 0.370982 | 6.3:-75037410 | MS.gene05335:CDS |
| TTGTCCACATAATGTGTCTA+AGG | 0.380227 | 6.3:+75038667 | None:intergenic |
| TTCCTTCAGCTGTAATGGTT+TGG | 0.389688 | 6.3:-75038154 | MS.gene05335:intron |
| TGCCATTCCTTCAGCTGTAA+TGG | 0.395491 | 6.3:-75038159 | MS.gene05335:CDS |
| GTAGAAGACCGTAAGCAAAA+AGG | 0.395768 | 6.3:+75038459 | None:intergenic |
| TTGGATCATATTATTTAGTT+GGG | 0.395886 | 6.3:-75036914 | MS.gene05335:CDS |
| TTTGACATAGAGTGCGAGTA+TGG | 0.397501 | 6.3:+75038265 | None:intergenic |
| TATAATATAGGGCCTGTGGC+TGG | 0.397818 | 6.3:-75036771 | MS.gene05335:intron |
| ATGGTATACAAGTCTGGATT+AGG | 0.409491 | 6.3:-75038338 | MS.gene05335:CDS |
| TAAATACAACAGCAGCTGTT+TGG | 0.423923 | 6.3:-75037725 | MS.gene05335:CDS |
| GTTCAGTGCAAGTGCTTCCT+TGG | 0.430530 | 6.3:+75038205 | None:intergenic |
| TCCAATGATGTTTAGCTCCT+CGG | 0.431966 | 6.3:-75038396 | MS.gene05335:CDS |
| GGATGTGGTTGGCAGAAAAT+TGG | 0.435156 | 6.3:-75036951 | MS.gene05335:CDS |
| TACTTCATCTTCCTCTATGT+TGG | 0.435862 | 6.3:-75038364 | MS.gene05335:CDS |
| TAGCAAATTCTATATCGTAC+TGG | 0.438537 | 6.3:-75038298 | MS.gene05335:CDS |
| ATAATATAGGGCCTGTGGCT+GGG | 0.439811 | 6.3:-75036770 | MS.gene05335:intron |
| TAATATAGGGCCTGTGGCTG+GGG | 0.444477 | 6.3:-75036769 | MS.gene05335:intron |
| ACCGAGGAGCTAAACATCAT+TGG | 0.444954 | 6.3:+75038395 | None:intergenic |
| TGGCAAGCTTCAGGAAAATT+GGG | 0.446874 | 6.3:+75038177 | None:intergenic |
| GCAAAGCAGTACCGCATGTC+AGG | 0.449733 | 6.3:-75038635 | MS.gene05335:CDS |
| TGGATAATGGTATACAAGTC+TGG | 0.467303 | 6.3:-75038344 | MS.gene05335:CDS |
| AAGTGGGATACGGCAAGAAT+TGG | 0.472050 | 6.3:+75037334 | None:intergenic |
| ACATTATGTGGACAATCATA+TGG | 0.474719 | 6.3:-75038659 | MS.gene05335:CDS |
| TCATTACAATACGCACAGAT+TGG | 0.479725 | 6.3:-75036706 | MS.gene05335:CDS |
| ATTCGTGTTTCGAATGAACT+TGG | 0.485317 | 6.3:-75037520 | MS.gene05335:CDS |
| GCCGTATCCCACTTACTAGA+TGG | 0.486822 | 6.3:-75037325 | MS.gene05335:CDS |
| CATGAAATATCTACTGAAGC+TGG | 0.490884 | 6.3:-75038509 | MS.gene05335:CDS |
| TCTTCTTCCAAATCCAAAGT+TGG | 0.494414 | 6.3:-75037932 | MS.gene05335:CDS |
| GACTAAGATGCTCTCAATAA+CGG | 0.495838 | 6.3:+75037444 | None:intergenic |
| CTTGCATTCCATCTAGTAAG+TGG | 0.503895 | 6.3:+75037317 | None:intergenic |
| TCGGACTCAGTGGAGCTGTA+AGG | 0.506674 | 6.3:-75037692 | MS.gene05335:intron |
| GCTGTTTGGATGATCCCCTT+CGG | 0.512079 | 6.3:-75037711 | MS.gene05335:CDS |
| CATTACAATACGCACAGATT+GGG | 0.515621 | 6.3:-75036705 | MS.gene05335:CDS |
| AAAGCGAATACAATGGCTGC+TGG | 0.518120 | 6.3:+75036888 | None:intergenic |
| TTGGCCAAGTAAAATGAGAA+TGG | 0.519826 | 6.3:+75038535 | None:intergenic |
| AACCATTACAGCTGAAGGAA+TGG | 0.525701 | 6.3:+75038157 | None:intergenic |
| CACATATAATCCCCAGCCAC+AGG | 0.532483 | 6.3:+75036759 | None:intergenic |
| TCCATCTAGTAAGTGGGATA+CGG | 0.545689 | 6.3:+75037324 | None:intergenic |
| ACGCACAGATTGGGAGAAAG+AGG | 0.549190 | 6.3:-75036696 | MS.gene05335:intron |
| AGCAAATTCTATATCGTACT+GGG | 0.549894 | 6.3:-75038297 | MS.gene05335:CDS |
| GTTTCGAATGAACTTGGTGC+TGG | 0.552325 | 6.3:-75037514 | MS.gene05335:CDS |
| TCAGGTACTGCTAGAGGATG+TGG | 0.553165 | 6.3:-75036966 | MS.gene05335:intron |
| TACCAAACCATTACAGCTGA+AGG | 0.556607 | 6.3:+75038152 | None:intergenic |
| TGTACTACATATTGGCGGGA+AGG | 0.571936 | 6.3:-75036865 | MS.gene05335:intron |
| AAGTCTGGATTAGGTAGCAG+AGG | 0.573228 | 6.3:-75038329 | MS.gene05335:CDS |
| AGTGCCTTAGACACATTATG+TGG | 0.575750 | 6.3:-75038671 | MS.gene05335:CDS |
| ATACTAGTTCGTAATTTATG+GGG | 0.582688 | 6.3:-75037409 | MS.gene05335:CDS |
| TACAGCTCCACTGAGTCCGA+AGG | 0.583200 | 6.3:+75037695 | None:intergenic |
| ACTGCCAAACGCGCAGCCTG+TGG | 0.583435 | 6.3:+75037487 | None:intergenic |
| ACTTGGTGCTGGTCATCCAC+AGG | 0.587929 | 6.3:-75037503 | MS.gene05335:CDS |
| TATACCATTATCCAACATAG+AGG | 0.595522 | 6.3:+75038353 | None:intergenic |
| ACAGCTCCACTGAGTCCGAA+GGG | 0.602693 | 6.3:+75037696 | None:intergenic |
| GTACGATATAGAATTTGCTA+TGG | 0.603395 | 6.3:+75038301 | None:intergenic |
| TGAGAGCATCTTAGTCGGAA+CGG | 0.605010 | 6.3:-75037437 | MS.gene05335:CDS |
| TATTTATAATATAGGGCCTG+TGG | 0.609405 | 6.3:-75036775 | MS.gene05335:intron |
| TGGTGAGCAGCTTGGAAATG+TGG | 0.613058 | 6.3:-75037984 | MS.gene05335:intron |
| TTGCATTCCATCTAGTAAGT+GGG | 0.618025 | 6.3:+75037318 | None:intergenic |
| GTTTGCCCAAATAATCGCGA+GGG | 0.618210 | 6.3:+75038565 | None:intergenic |
| TATGATTCAGGTACTGCTAG+AGG | 0.620194 | 6.3:-75036972 | MS.gene05335:intron |
| ATGATCCCCTTCGGACTCAG+TGG | 0.634889 | 6.3:-75037702 | MS.gene05335:CDS |
| GTTATTGAGAGCATCTTAGT+CGG | 0.638872 | 6.3:-75037442 | MS.gene05335:CDS |
| ATGAAGTAATGTTGTAACCG+AGG | 0.644303 | 6.3:+75038379 | None:intergenic |
| TGTTTGCCCAAATAATCGCG+AGG | 0.649848 | 6.3:+75038564 | None:intergenic |
| GACAAAGCGCTTGAACAACG+AGG | 0.670556 | 6.3:+75036735 | None:intergenic |
| GACGATCATGAGAATGAACA+TGG | 0.672131 | 6.3:+75038595 | None:intergenic |
| GTACTGCTAGAGGATGTGGT+TGG | 0.674177 | 6.3:-75036962 | MS.gene05335:CDS |
| TAGTACAAAAGCGAATACAA+TGG | 0.675143 | 6.3:+75036881 | None:intergenic |
| CAGCTCCACTGAGTCCGAAG+GGG | 0.677876 | 6.3:+75037697 | None:intergenic |
| ACAAAGCGCTTGAACAACGA+GGG | 0.691240 | 6.3:+75036736 | None:intergenic |
| TTTGCCCAAATAATCGCGAG+GGG | 0.704818 | 6.3:+75038566 | None:intergenic |
| GCATGTGTATGCCTGACATG+CGG | 0.723702 | 6.3:+75038624 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAAATATTTATAATATA+GGG | - | chr6.3:75038421-75038440 | MS.gene05335:CDS | 0.0% |
| !! | TATTATAAATATTTATTAGC+AGG | + | chr6.3:75038419-75038438 | None:intergenic | 10.0% |
| !! | AAAATAAAATCAAAAGTTGT+TGG | + | chr6.3:75037934-75037953 | None:intergenic | 15.0% |
| !! | AAAGATCGAAAAAAATAAAT+AGG | - | chr6.3:75038110-75038129 | MS.gene05335:intron | 15.0% |
| !! | AAATGAATCAGAAAATATAA+AGG | + | chr6.3:75038613-75038632 | None:intergenic | 15.0% |
| !! | TCACATGAATATTTAATTAA+AGG | + | chr6.3:75038568-75038587 | None:intergenic | 15.0% |
| !!! | TTATTTTGTTCATAAGATTT+GGG | - | chr6.3:75037947-75037966 | MS.gene05335:CDS | 15.0% |
| !!! | TTTATTTTGTTCATAAGATT+TGG | - | chr6.3:75037946-75037965 | MS.gene05335:CDS | 15.0% |
| !! | ATTAACATAGAAAAAAGCTT+TGG | + | chr6.3:75037583-75037602 | None:intergenic | 20.0% |
| !! | CTAATATATCTGATACAAAA+AGG | - | chr6.3:75038000-75038019 | MS.gene05335:intron | 20.0% |
| !! | TTGGATCATATTATTTAGTT+GGG | - | chr6.3:75038289-75038308 | MS.gene05335:CDS | 20.0% |
| !!! | ATACAATATTTTGAGTTTGT+AGG | + | chr6.3:75036786-75036805 | None:intergenic | 20.0% |
| !!! | TAATTTTCTTAACCTTTTGT+TGG | - | chr6.3:75037436-75037455 | MS.gene05335:CDS | 20.0% |
| !!! | TACAAAAAGGTAACTAATTT+TGG | - | chr6.3:75038013-75038032 | MS.gene05335:intron | 20.0% |
| ! | AAAATCGCTATCATAAGATT+TGG | - | chr6.3:75038388-75038407 | MS.gene05335:CDS | 25.0% |
| ! | AATGTGGTCATTTGAATTAA+TGG | - | chr6.3:75037235-75037254 | MS.gene05335:intron | 25.0% |
| ! | ATACTAGTTCGTAATTTATG+GGG | - | chr6.3:75037794-75037813 | MS.gene05335:intron | 25.0% |
| ! | ATTACTCAAGTATTAAGAGA+AGG | + | chr6.3:75037081-75037100 | None:intergenic | 25.0% |
| ! | CTTGGATCATATTATTTAGT+TGG | - | chr6.3:75038288-75038307 | MS.gene05335:CDS | 25.0% |
| ! | GATACTAGTTCGTAATTTAT+GGG | - | chr6.3:75037793-75037812 | MS.gene05335:intron | 25.0% |
| ! | TAGGCTTAAGTTAAATAGTA+TGG | + | chr6.3:75037554-75037573 | None:intergenic | 25.0% |
| ! | TCATGTAAAAAAACATGGAA+TGG | - | chr6.3:75036970-75036989 | MS.gene05335:intron | 25.0% |
| ! | TGAATTAATGGTTCTTCTTT+CGG | - | chr6.3:75037247-75037266 | MS.gene05335:intron | 25.0% |
| ! | TGATACTAGTTCGTAATTTA+TGG | - | chr6.3:75037792-75037811 | MS.gene05335:intron | 25.0% |
| !! | TTTTCTGATTCATTTTGTAC+AGG | - | chr6.3:75038618-75038637 | MS.gene05335:CDS | 25.0% |
| !!! | AAAAAAGCTTTGGAGAATTT+AGG | + | chr6.3:75037573-75037592 | None:intergenic | 25.0% |
| !!! | TTCCATGTTTTTTTACATGA+AGG | + | chr6.3:75036970-75036989 | None:intergenic | 25.0% |
| AATAAATAGGTCATCGAAGT+TGG | - | chr6.3:75038123-75038142 | MS.gene05335:intron | 30.0% | |
| AATATTCATGTGATGCATTG+TGG | - | chr6.3:75038575-75038594 | MS.gene05335:CDS | 30.0% | |
| ACATTATGTGGACAATCATA+TGG | - | chr6.3:75036544-75036563 | MS.gene05335:CDS | 30.0% | |
| AGCAAATTCTATATCGTACT+GGG | - | chr6.3:75036906-75036925 | MS.gene05335:CDS | 30.0% | |
| ATATTCATGTGATGCATTGT+GGG | - | chr6.3:75038576-75038595 | MS.gene05335:CDS | 30.0% | |
| ATGTAACAATAATGTCGAAG+AGG | + | chr6.3:75037339-75037358 | None:intergenic | 30.0% | |
| CAGTAGATATTTCATGATCT+TGG | + | chr6.3:75036690-75036709 | None:intergenic | 30.0% | |
| CTCCTTCATGTAAAAAAACA+TGG | - | chr6.3:75036965-75036984 | MS.gene05335:CDS | 30.0% | |
| GAATTAATGGTTCTTCTTTC+GGG | - | chr6.3:75037248-75037267 | MS.gene05335:intron | 30.0% | |
| TAAAAACAGAACGAGACATA+CGG | - | chr6.3:75037971-75037990 | MS.gene05335:CDS | 30.0% | |
| TAGCAAATTCTATATCGTAC+TGG | - | chr6.3:75036905-75036924 | MS.gene05335:CDS | 30.0% | |
| TAGTACAAAAGCGAATACAA+TGG | + | chr6.3:75038325-75038344 | None:intergenic | 30.0% | |
| TATACCATTATCCAACATAG+AGG | + | chr6.3:75036853-75036872 | None:intergenic | 30.0% | |
| TATTTATAATATAGGGCCTG+TGG | - | chr6.3:75038428-75038447 | MS.gene05335:CDS | 30.0% | |
| ! | AGATCCATTCTCATTTTACT+TGG | - | chr6.3:75036664-75036683 | MS.gene05335:intron | 30.0% |
| ! | TAGCGATTTTCATGAAAGAA+TGG | + | chr6.3:75038378-75038397 | None:intergenic | 30.0% |
| !! | GTACGATATAGAATTTGCTA+TGG | + | chr6.3:75036905-75036924 | None:intergenic | 30.0% |
| !! | TTCGCTTTTGTACTACATAT+TGG | - | chr6.3:75038330-75038349 | MS.gene05335:CDS | 30.0% |
| AAAAACAGAACGAGACATAC+GGG | - | chr6.3:75037972-75037991 | MS.gene05335:CDS | 35.0% | |
| AAACATCTGTGCTTTCTATC+TGG | - | chr6.3:75037294-75037313 | MS.gene05335:intron | 35.0% | |
| ATGAAGTAATGTTGTAACCG+AGG | + | chr6.3:75036827-75036846 | None:intergenic | 35.0% | |
| ATGGTATACAAGTCTGGATT+AGG | - | chr6.3:75036865-75036884 | MS.gene05335:intron | 35.0% | |
| ATTCGTGTTTCGAATGAACT+TGG | - | chr6.3:75037683-75037702 | MS.gene05335:intron | 35.0% | |
| CATGAAATATCTACTGAAGC+TGG | - | chr6.3:75036694-75036713 | MS.gene05335:intron | 35.0% | |
| CATTACAATACGCACAGATT+GGG | - | chr6.3:75038498-75038517 | MS.gene05335:CDS | 35.0% | |
| GACTAAGATGCTCTCAATAA+CGG | + | chr6.3:75037762-75037781 | None:intergenic | 35.0% | |
| GATGTTTCCAACTTTGGATT+TGG | + | chr6.3:75037281-75037300 | None:intergenic | 35.0% | |
| TAAATACAACAGCAGCTGTT+TGG | - | chr6.3:75037478-75037497 | MS.gene05335:CDS | 35.0% | |
| TACTTCATCTTCCTCTATGT+TGG | - | chr6.3:75036839-75036858 | MS.gene05335:intron | 35.0% | |
| TATTCATGTGATGCATTGTG+GGG | - | chr6.3:75038577-75038596 | MS.gene05335:CDS | 35.0% | |
| TCATTACAATACGCACAGAT+TGG | - | chr6.3:75038497-75038516 | MS.gene05335:CDS | 35.0% | |
| TCTTCCTCTATGTTGGATAA+TGG | - | chr6.3:75036846-75036865 | MS.gene05335:intron | 35.0% | |
| TCTTCTTCCAAATCCAAAGT+TGG | - | chr6.3:75037271-75037290 | MS.gene05335:intron | 35.0% | |
| TTGCATTCCATCTAGTAAGT+GGG | + | chr6.3:75037888-75037907 | None:intergenic | 35.0% | |
| TTGGCATCTCTAACACTTAT+TGG | - | chr6.3:75038142-75038161 | MS.gene05335:intron | 35.0% | |
| TTGGCCAAGTAAAATGAGAA+TGG | + | chr6.3:75036671-75036690 | None:intergenic | 35.0% | |
| TTGTCCACATAATGTGTCTA+AGG | + | chr6.3:75036539-75036558 | None:intergenic | 35.0% | |
| ! | AACATGGAATGGTTTTTCCA+AGG | - | chr6.3:75036981-75037000 | MS.gene05335:intron | 35.0% |
| ! | CTTTTGTACTACATATTGGC+GGG | - | chr6.3:75038334-75038353 | MS.gene05335:CDS | 35.0% |
| ! | GCTTTTGTACTACATATTGG+CGG | - | chr6.3:75038333-75038352 | MS.gene05335:CDS | 35.0% |
| ! | TCATTTTGTACAGGCAAAGA+AGG | - | chr6.3:75038627-75038646 | MS.gene05335:CDS | 35.0% |
| ! | TGGATAATGGTATACAAGTC+TGG | - | chr6.3:75036859-75036878 | MS.gene05335:intron | 35.0% |
| !! | ATTGGTGCTTTTGTCAATCT+TGG | - | chr6.3:75038270-75038289 | MS.gene05335:CDS | 35.0% |
| !! | GTTATTGAGAGCATCTTAGT+CGG | - | chr6.3:75037761-75037780 | MS.gene05335:intron | 35.0% |
| !!! | TTAACCTTTTGTTGGTGACT+TGG | - | chr6.3:75037444-75037463 | MS.gene05335:CDS | 35.0% |
| !!! | TTCCTTTGTTTTCTTCGTCA+TGG | - | chr6.3:75037199-75037218 | MS.gene05335:intron | 35.0% |
| AACCATTACAGCTGAAGGAA+TGG | + | chr6.3:75037049-75037068 | None:intergenic | 40.0% | |
| AGAACCAAGTCACCAACAAA+AGG | + | chr6.3:75037451-75037470 | None:intergenic | 40.0% | |
| AGCACAGATGTTTCCAACTT+TGG | + | chr6.3:75037287-75037306 | None:intergenic | 40.0% | |
| AGTGCCTTAGACACATTATG+TGG | - | chr6.3:75036532-75036551 | MS.gene05335:CDS | 40.0% | |
| ATCTGTGCTTTCTATCTGGT+TGG | - | chr6.3:75037298-75037317 | MS.gene05335:intron | 40.0% | |
| ATGGCAAGCTTCAGGAAAAT+TGG | + | chr6.3:75037030-75037049 | None:intergenic | 40.0% | |
| CACCATGACGAAGAAAACAA+AGG | + | chr6.3:75037204-75037223 | None:intergenic | 40.0% | |
| CAGTACCTGAATCATAGTGA+AGG | + | chr6.3:75038227-75038246 | None:intergenic | 40.0% | |
| CTTGCATTCCATCTAGTAAG+TGG | + | chr6.3:75037889-75037908 | None:intergenic | 40.0% | |
| GACGATCATGAGAATGAACA+TGG | + | chr6.3:75036611-75036630 | None:intergenic | 40.0% | |
| GAGCTGTAAGGTTTGAAAAC+AGG | - | chr6.3:75037523-75037542 | MS.gene05335:CDS | 40.0% | |
| GATCTCCTTCACTATGATTC+AGG | - | chr6.3:75038219-75038238 | MS.gene05335:CDS | 40.0% | |
| GGCGGGAAGGTAAAAATAAA+TGG | - | chr6.3:75038351-75038370 | MS.gene05335:CDS | 40.0% | |
| GTAGAAGACCGTAAGCAAAA+AGG | + | chr6.3:75036747-75036766 | None:intergenic | 40.0% | |
| TACCAAACCATTACAGCTGA+AGG | + | chr6.3:75037054-75037073 | None:intergenic | 40.0% | |
| TATTCCCCTCGCGATTATTT+GGG | - | chr6.3:75036633-75036652 | MS.gene05335:intron | 40.0% | |
| TCCATCTAGTAAGTGGGATA+CGG | + | chr6.3:75037882-75037901 | None:intergenic | 40.0% | |
| TGGCAAGCTTCAGGAAAATT+GGG | + | chr6.3:75037029-75037048 | None:intergenic | 40.0% | |
| TGGCAGCTATGCTAAGTTAA+TGG | - | chr6.3:75036714-75036733 | MS.gene05335:CDS | 40.0% | |
| TTCCTTCAGCTGTAATGGTT+TGG | - | chr6.3:75037049-75037068 | MS.gene05335:intron | 40.0% | |
| TTTGACATAGAGTGCGAGTA+TGG | + | chr6.3:75036941-75036960 | None:intergenic | 40.0% | |
| ! | GTTCCATGCCTTTTTGCTTA+CGG | - | chr6.3:75036736-75036755 | MS.gene05335:CDS | 40.0% |
| ! | TATGATTCAGGTACTGCTAG+AGG | - | chr6.3:75038231-75038250 | MS.gene05335:CDS | 40.0% |
| ! | TCCAATGATGTTTAGCTCCT+CGG | - | chr6.3:75036807-75036826 | MS.gene05335:intron | 40.0% |
| AAAGCGAATACAATGGCTGC+TGG | + | chr6.3:75038318-75038337 | None:intergenic | 45.0% | |
| AAGTGGGATACGGCAAGAAT+TGG | + | chr6.3:75037872-75037891 | None:intergenic | 45.0% | |
| ACCGAGGAGCTAAACATCAT+TGG | + | chr6.3:75036811-75036830 | None:intergenic | 45.0% | |
| AGACCGTAAGCAAAAAGGCA+TGG | + | chr6.3:75036742-75036761 | None:intergenic | 45.0% | |
| ATAATATAGGGCCTGTGGCT+GGG | - | chr6.3:75038433-75038452 | MS.gene05335:CDS | 45.0% | |
| CTATTCCCCTCGCGATTATT+TGG | - | chr6.3:75036632-75036651 | MS.gene05335:intron | 45.0% | |
| GGAATGCAAGCTGTTCTTTC+AGG | - | chr6.3:75037899-75037918 | MS.gene05335:intron | 45.0% | |
| GGATGTGGTTGGCAGAAAAT+TGG | - | chr6.3:75038252-75038271 | MS.gene05335:CDS | 45.0% | |
| GTTTGCCCAAATAATCGCGA+GGG | + | chr6.3:75036641-75036660 | None:intergenic | 45.0% | |
| TATAATATAGGGCCTGTGGC+TGG | - | chr6.3:75038432-75038451 | MS.gene05335:CDS | 45.0% | |
| TGCCATTCCTTCAGCTGTAA+TGG | - | chr6.3:75037044-75037063 | MS.gene05335:intron | 45.0% | |
| TGTACTACATATTGGCGGGA+AGG | - | chr6.3:75038338-75038357 | MS.gene05335:CDS | 45.0% | |
| TGTTTGCCCAAATAATCGCG+AGG | + | chr6.3:75036642-75036661 | None:intergenic | 45.0% | |
| TTTGCCCAAATAATCGCGAG+GGG | + | chr6.3:75036640-75036659 | None:intergenic | 45.0% | |
| ! | AAGTCTGGATTAGGTAGCAG+AGG | - | chr6.3:75036874-75036893 | MS.gene05335:CDS | 45.0% |
| ! | ACAAAGCGCTTGAACAACGA+GGG | + | chr6.3:75038470-75038489 | None:intergenic | 45.0% |
| !! | GTTTCGAATGAACTTGGTGC+TGG | - | chr6.3:75037689-75037708 | MS.gene05335:intron | 45.0% |
| !! | TGAGAGCATCTTAGTCGGAA+CGG | - | chr6.3:75037766-75037785 | MS.gene05335:intron | 45.0% |
| !! | CTAATAAATATTTATAATAT+AGG | - | chr6.3:75038420-75038439 | MS.gene05335:CDS | 5.0% |
| ACGCACAGATTGGGAGAAAG+AGG | - | chr6.3:75038507-75038526 | MS.gene05335:CDS | 50.0% | |
| CACATATAATCCCCAGCCAC+AGG | + | chr6.3:75038447-75038466 | None:intergenic | 50.0% | |
| CTGAAGGAATGGCAAGCTTC+AGG | + | chr6.3:75037038-75037057 | None:intergenic | 50.0% | |
| GCATGTGTATGCCTGACATG+CGG | + | chr6.3:75036582-75036601 | None:intergenic | 50.0% | |
| GCCGTATCCCACTTACTAGA+TGG | - | chr6.3:75037878-75037897 | MS.gene05335:intron | 50.0% | |
| GCTGTTTGGATGATCCCCTT+CGG | - | chr6.3:75037492-75037511 | MS.gene05335:CDS | 50.0% | |
| GTACTGCTAGAGGATGTGGT+TGG | - | chr6.3:75038241-75038260 | MS.gene05335:CDS | 50.0% | |
| GTTCAGTGCAAGTGCTTCCT+TGG | + | chr6.3:75037001-75037020 | None:intergenic | 50.0% | |
| TAATATAGGGCCTGTGGCTG+GGG | - | chr6.3:75038434-75038453 | MS.gene05335:CDS | 50.0% | |
| TGGTGAGCAGCTTGGAAATG+TGG | - | chr6.3:75037219-75037238 | MS.gene05335:intron | 50.0% | |
| ! | GACAAAGCGCTTGAACAACG+AGG | + | chr6.3:75038471-75038490 | None:intergenic | 50.0% |
| ! | TCAGGTACTGCTAGAGGATG+TGG | - | chr6.3:75038237-75038256 | MS.gene05335:CDS | 50.0% |
| ACAGCTCCACTGAGTCCGAA+GGG | + | chr6.3:75037510-75037529 | None:intergenic | 55.0% | |
| ATGATCCCCTTCGGACTCAG+TGG | - | chr6.3:75037501-75037520 | MS.gene05335:CDS | 55.0% | |
| CTTCGTCATGGTGAGCAGCT+TGG | - | chr6.3:75037211-75037230 | MS.gene05335:intron | 55.0% | |
| GCAAAGCAGTACCGCATGTC+AGG | - | chr6.3:75036568-75036587 | MS.gene05335:intron | 55.0% | |
| TACAGCTCCACTGAGTCCGA+AGG | + | chr6.3:75037511-75037530 | None:intergenic | 55.0% | |
| TCGGACTCAGTGGAGCTGTA+AGG | - | chr6.3:75037511-75037530 | MS.gene05335:CDS | 55.0% | |
| !! | ACTTGGTGCTGGTCATCCAC+AGG | - | chr6.3:75037700-75037719 | MS.gene05335:CDS | 55.0% |
| CAGCTCCACTGAGTCCGAAG+GGG | + | chr6.3:75037509-75037528 | None:intergenic | 60.0% | |
| TCATCCACAGGCTGCGCGTT+TGG | - | chr6.3:75037712-75037731 | MS.gene05335:CDS | 60.0% | |
| ACTGCCAAACGCGCAGCCTG+TGG | + | chr6.3:75037719-75037738 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 75036526 | 75038699 | 75036526 | ID=MS.gene05335 |
| chr6.3 | mRNA | 75036526 | 75038699 | 75036526 | ID=MS.gene05335.t1;Parent=MS.gene05335 |
| chr6.3 | exon | 75038155 | 75038699 | 75038155 | ID=MS.gene05335.t1.exon1;Parent=MS.gene05335.t1 |
| chr6.3 | CDS | 75038155 | 75038699 | 75038155 | ID=cds.MS.gene05335.t1;Parent=MS.gene05335.t1 |
| chr6.3 | exon | 75037910 | 75037996 | 75037910 | ID=MS.gene05335.t1.exon2;Parent=MS.gene05335.t1 |
| chr6.3 | CDS | 75037910 | 75037996 | 75037910 | ID=cds.MS.gene05335.t1;Parent=MS.gene05335.t1 |
| chr6.3 | exon | 75037693 | 75037749 | 75037693 | ID=MS.gene05335.t1.exon3;Parent=MS.gene05335.t1 |
| chr6.3 | CDS | 75037693 | 75037749 | 75037693 | ID=cds.MS.gene05335.t1;Parent=MS.gene05335.t1 |
| chr6.3 | exon | 75037305 | 75037543 | 75037305 | ID=MS.gene05335.t1.exon4;Parent=MS.gene05335.t1 |
| chr6.3 | CDS | 75037305 | 75037543 | 75037305 | ID=cds.MS.gene05335.t1;Parent=MS.gene05335.t1 |
| chr6.3 | exon | 75036866 | 75036984 | 75036866 | ID=MS.gene05335.t1.exon5;Parent=MS.gene05335.t1 |
| chr6.3 | CDS | 75036866 | 75036984 | 75036866 | ID=cds.MS.gene05335.t1;Parent=MS.gene05335.t1 |
| chr6.3 | exon | 75036697 | 75036783 | 75036697 | ID=MS.gene05335.t1.exon6;Parent=MS.gene05335.t1 |
| chr6.3 | CDS | 75036697 | 75036783 | 75036697 | ID=cds.MS.gene05335.t1;Parent=MS.gene05335.t1 |
| chr6.3 | exon | 75036526 | 75036585 | 75036526 | ID=MS.gene05335.t1.exon7;Parent=MS.gene05335.t1 |
| chr6.3 | CDS | 75036526 | 75036585 | 75036526 | ID=cds.MS.gene05335.t1;Parent=MS.gene05335.t1 |
| Gene Sequence |
| Protein sequence |
