Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022245.t1 | KEH35105.1 | 92.3 | 599 | 44 | 1 | 1 | 599 | 1 | 597 | 0.00E+00 | 1118.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022245.t1 | Q40588 | 63.6 | 601 | 188 | 3 | 1 | 596 | 1 | 575 | 4.6e-231 | 802.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022245.t1 | A0A072VA87 | 92.3 | 599 | 44 | 1 | 1 | 599 | 1 | 597 | 0.0e+00 | 1118.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene28968 | MS.gene022245 | PPI |
MS.gene030765 | MS.gene022245 | PPI |
MS.gene022245 | MS.gene70354 | PPI |
MS.gene022245 | MS.gene030762 | PPI |
MS.gene30569 | MS.gene022245 | PPI |
MS.gene004011 | MS.gene022245 | PPI |
MS.gene059694 | MS.gene022245 | PPI |
MS.gene022245 | MS.gene021147 | PPI |
MS.gene022245 | MS.gene059697 | PPI |
MS.gene022245 | MS.gene41139 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022245.t1 | MTR_3g078740 | 94.825 | 599 | 29 | 1 | 1 | 599 | 1 | 597 | 0.0 | 1183 |
MS.gene022245.t1 | MTR_3g078700 | 76.819 | 591 | 84 | 3 | 1 | 590 | 1 | 539 | 0.0 | 937 |
MS.gene022245.t1 | MTR_3g078730 | 74.333 | 600 | 100 | 4 | 1 | 599 | 1 | 547 | 0.0 | 889 |
MS.gene022245.t1 | MTR_8g091390 | 47.222 | 576 | 268 | 10 | 23 | 594 | 31 | 574 | 0.0 | 540 |
MS.gene022245.t1 | MTR_7g058690 | 32.368 | 587 | 327 | 18 | 7 | 567 | 14 | 556 | 1.07e-70 | 239 |
MS.gene022245.t1 | MTR_5g081810 | 33.454 | 553 | 285 | 22 | 41 | 569 | 14 | 507 | 4.57e-70 | 236 |
MS.gene022245.t1 | MTR_5g069680 | 33.163 | 588 | 322 | 21 | 1 | 570 | 3 | 537 | 2.46e-69 | 234 |
MS.gene022245.t1 | MTR_7g060460 | 31.687 | 587 | 329 | 18 | 7 | 565 | 13 | 555 | 4.24e-69 | 234 |
MS.gene022245.t1 | MTR_4g015120 | 32.530 | 581 | 330 | 22 | 1 | 569 | 5 | 535 | 7.01e-69 | 233 |
MS.gene022245.t1 | MTR_7g458880 | 31.472 | 591 | 329 | 19 | 4 | 565 | 11 | 554 | 1.08e-67 | 231 |
MS.gene022245.t1 | MTR_5g083360 | 30.229 | 612 | 351 | 20 | 1 | 584 | 1 | 564 | 1.13e-66 | 228 |
MS.gene022245.t1 | MTR_7g062250 | 33.108 | 592 | 308 | 24 | 7 | 565 | 16 | 552 | 2.15e-66 | 227 |
MS.gene022245.t1 | MTR_2g008330 | 31.579 | 570 | 320 | 18 | 23 | 569 | 35 | 557 | 3.27e-65 | 224 |
MS.gene022245.t1 | MTR_5g020600 | 31.017 | 590 | 310 | 21 | 13 | 570 | 21 | 545 | 5.14e-65 | 223 |
MS.gene022245.t1 | MTR_4g064530 | 32.218 | 568 | 313 | 24 | 22 | 565 | 40 | 559 | 3.42e-64 | 221 |
MS.gene022245.t1 | MTR_5g073210 | 30.565 | 602 | 332 | 23 | 9 | 579 | 4 | 550 | 4.66e-64 | 220 |
MS.gene022245.t1 | MTR_3g462760 | 32.099 | 567 | 318 | 19 | 20 | 570 | 20 | 535 | 6.82e-64 | 220 |
MS.gene022245.t1 | MTR_5g020620 | 30.420 | 595 | 313 | 22 | 8 | 569 | 13 | 539 | 7.07e-63 | 217 |
MS.gene022245.t1 | MTR_3g101635 | 29.766 | 598 | 335 | 21 | 1 | 569 | 3 | 544 | 3.81e-62 | 215 |
MS.gene022245.t1 | MTR_8g027375 | 29.982 | 567 | 343 | 19 | 16 | 569 | 24 | 549 | 6.29e-62 | 215 |
MS.gene022245.t1 | MTR_7g062310 | 31.966 | 585 | 321 | 21 | 26 | 580 | 47 | 584 | 1.92e-61 | 214 |
MS.gene022245.t1 | MTR_3g101640 | 30.288 | 591 | 348 | 23 | 1 | 569 | 1 | 549 | 6.90e-59 | 206 |
MS.gene022245.t1 | MTR_4g064530 | 31.495 | 562 | 313 | 24 | 22 | 559 | 40 | 553 | 3.99e-57 | 201 |
MS.gene022245.t1 | MTR_4g132320 | 30.261 | 575 | 324 | 19 | 26 | 590 | 31 | 538 | 1.27e-55 | 197 |
MS.gene022245.t1 | MTR_7g065980 | 28.995 | 607 | 327 | 26 | 7 | 569 | 3 | 549 | 2.68e-55 | 197 |
MS.gene022245.t1 | MTR_7g065970 | 27.695 | 603 | 347 | 22 | 1 | 569 | 1 | 548 | 5.91e-53 | 190 |
MS.gene022245.t1 | MTR_8g479390 | 27.397 | 584 | 333 | 20 | 25 | 590 | 27 | 537 | 1.25e-52 | 189 |
MS.gene022245.t1 | MTR_4g049390 | 27.539 | 581 | 326 | 17 | 26 | 587 | 27 | 531 | 2.96e-52 | 188 |
MS.gene022245.t1 | MTR_5g018270 | 29.032 | 589 | 318 | 22 | 20 | 587 | 22 | 531 | 5.82e-52 | 187 |
MS.gene022245.t1 | MTR_3g071890 | 29.843 | 573 | 315 | 22 | 3 | 547 | 13 | 526 | 7.79e-52 | 187 |
MS.gene022245.t1 | MTR_4g019225 | 29.329 | 566 | 333 | 20 | 28 | 569 | 28 | 550 | 2.55e-50 | 183 |
MS.gene022245.t1 | MTR_3g115050 | 27.045 | 599 | 349 | 19 | 8 | 590 | 11 | 537 | 7.46e-50 | 181 |
MS.gene022245.t1 | MTR_1g090707 | 27.971 | 547 | 287 | 17 | 45 | 564 | 43 | 509 | 2.39e-49 | 181 |
MS.gene022245.t1 | MTR_3g083390 | 27.592 | 569 | 312 | 21 | 49 | 592 | 48 | 541 | 3.02e-49 | 180 |
MS.gene022245.t1 | MTR_4g083190 | 26.159 | 604 | 361 | 22 | 7 | 592 | 7 | 543 | 3.57e-49 | 179 |
MS.gene022245.t1 | MTR_3g083440 | 27.611 | 565 | 317 | 21 | 49 | 592 | 48 | 541 | 4.28e-49 | 179 |
MS.gene022245.t1 | MTR_3g083400 | 27.788 | 565 | 316 | 21 | 49 | 592 | 48 | 541 | 1.59e-48 | 177 |
MS.gene022245.t1 | MTR_3g083430 | 27.417 | 569 | 313 | 21 | 49 | 592 | 48 | 541 | 1.73e-48 | 177 |
MS.gene022245.t1 | MTR_4g048350 | 26.990 | 578 | 332 | 17 | 26 | 587 | 27 | 530 | 2.34e-48 | 177 |
MS.gene022245.t1 | MTR_8g479380 | 26.700 | 603 | 336 | 23 | 12 | 587 | 9 | 532 | 2.75e-48 | 177 |
MS.gene022245.t1 | MTR_3g083450 | 27.592 | 569 | 312 | 22 | 49 | 592 | 49 | 542 | 5.84e-48 | 176 |
MS.gene022245.t1 | MTR_3g083410 | 27.305 | 564 | 320 | 20 | 49 | 592 | 12 | 505 | 5.96e-48 | 175 |
MS.gene022245.t1 | MTR_4g101650 | 28.028 | 578 | 342 | 20 | 28 | 587 | 29 | 550 | 2.79e-47 | 175 |
MS.gene022245.t1 | MTR_1g026410 | 26.496 | 585 | 336 | 18 | 26 | 591 | 29 | 538 | 4.70e-47 | 174 |
MS.gene022245.t1 | MTR_4g075690 | 25.993 | 604 | 352 | 18 | 1 | 587 | 8 | 533 | 5.52e-47 | 173 |
MS.gene022245.t1 | MTR_3g008580 | 26.573 | 572 | 338 | 17 | 38 | 587 | 41 | 552 | 1.57e-46 | 173 |
MS.gene022245.t1 | MTR_2g088080 | 26.079 | 579 | 337 | 15 | 26 | 587 | 30 | 534 | 1.34e-45 | 169 |
MS.gene022245.t1 | MTR_7g051440 | 26.817 | 578 | 356 | 20 | 28 | 592 | 31 | 554 | 1.51e-45 | 170 |
MS.gene022245.t1 | MTR_3g079660 | 75.258 | 97 | 23 | 1 | 502 | 597 | 5 | 101 | 7.67e-44 | 152 |
MS.gene022245.t1 | MTR_4g083210 | 26.761 | 568 | 314 | 21 | 49 | 592 | 48 | 537 | 3.81e-41 | 157 |
MS.gene022245.t1 | MTR_4g075690 | 26.104 | 521 | 289 | 18 | 1 | 506 | 8 | 447 | 3.81e-35 | 138 |
MS.gene022245.t1 | MTR_2g088080 | 24.571 | 525 | 306 | 14 | 80 | 587 | 2 | 453 | 9.02e-35 | 137 |
MS.gene022245.t1 | MTR_2g009230 | 86.885 | 61 | 8 | 0 | 131 | 191 | 1 | 61 | 2.67e-31 | 117 |
MS.gene022245.t1 | MTR_5g081790 | 31.310 | 313 | 161 | 14 | 257 | 549 | 142 | 420 | 5.65e-21 | 96.3 |
MS.gene022245.t1 | MTR_5g081790 | 34.667 | 150 | 86 | 5 | 6 | 148 | 7 | 151 | 4.57e-17 | 84.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022245.t1 | AT5G21105 | 62.783 | 575 | 187 | 3 | 23 | 595 | 35 | 584 | 0.0 | 761 |
MS.gene022245.t1 | AT5G21100 | 62.697 | 571 | 179 | 6 | 30 | 595 | 28 | 569 | 0.0 | 729 |
MS.gene022245.t1 | AT5G21105 | 62.382 | 529 | 172 | 3 | 23 | 549 | 35 | 538 | 0.0 | 692 |
MS.gene022245.t1 | AT4G39830 | 47.924 | 578 | 264 | 9 | 23 | 591 | 33 | 582 | 0.0 | 556 |
MS.gene022245.t1 | AT5G21105 | 60.539 | 408 | 134 | 3 | 190 | 595 | 11 | 393 | 1.43e-179 | 513 |
MS.gene022245.t1 | AT4G39830 | 47.563 | 513 | 232 | 9 | 88 | 591 | 3 | 487 | 1.07e-163 | 476 |
MS.gene022245.t1 | AT4G39830 | 47.554 | 511 | 231 | 9 | 90 | 591 | 3 | 485 | 3.02e-163 | 475 |
MS.gene022245.t1 | AT4G39830 | 45.614 | 513 | 229 | 10 | 88 | 591 | 3 | 474 | 1.69e-151 | 445 |
MS.gene022245.t1 | AT5G58910 | 29.716 | 599 | 339 | 17 | 1 | 570 | 1 | 546 | 2.81e-65 | 224 |
MS.gene022245.t1 | AT1G18140 | 30.241 | 582 | 337 | 19 | 20 | 572 | 23 | 564 | 1.00e-64 | 223 |
MS.gene022245.t1 | AT5G03260 | 30.664 | 587 | 328 | 23 | 7 | 570 | 6 | 536 | 1.10e-64 | 222 |
MS.gene022245.t1 | AT5G58910 | 29.933 | 598 | 336 | 18 | 1 | 569 | 1 | 544 | 2.86e-64 | 221 |
MS.gene022245.t1 | AT2G29130 | 32.993 | 588 | 325 | 23 | 1 | 565 | 6 | 547 | 3.82e-64 | 221 |
MS.gene022245.t1 | AT2G46570 | 29.965 | 564 | 335 | 18 | 22 | 569 | 28 | 547 | 5.83e-62 | 215 |
MS.gene022245.t1 | AT2G30210 | 29.706 | 579 | 332 | 19 | 17 | 569 | 19 | 548 | 8.02e-62 | 214 |
MS.gene022245.t1 | AT5G48100 | 30.730 | 589 | 324 | 25 | 13 | 569 | 5 | 541 | 2.07e-61 | 213 |
MS.gene022245.t1 | AT5G05390 | 29.443 | 574 | 324 | 18 | 23 | 569 | 24 | 543 | 2.93e-61 | 213 |
MS.gene022245.t1 | AT5G07130 | 29.822 | 617 | 344 | 22 | 3 | 586 | 9 | 569 | 2.84e-60 | 210 |
MS.gene022245.t1 | AT2G40370 | 29.392 | 592 | 345 | 20 | 8 | 569 | 10 | 558 | 4.58e-60 | 210 |
MS.gene022245.t1 | AT5G09360 | 30.303 | 594 | 331 | 23 | 1 | 569 | 12 | 547 | 9.49e-60 | 209 |
MS.gene022245.t1 | AT5G60020 | 30.640 | 594 | 338 | 23 | 1 | 565 | 3 | 551 | 1.20e-59 | 209 |
MS.gene022245.t1 | AT3G09220 | 30.017 | 573 | 315 | 21 | 28 | 569 | 28 | 545 | 2.22e-59 | 208 |
MS.gene022245.t1 | AT5G01040 | 29.762 | 588 | 318 | 21 | 16 | 569 | 18 | 544 | 4.13e-59 | 207 |
MS.gene022245.t1 | AT5G60020 | 31.227 | 554 | 310 | 20 | 41 | 565 | 8 | 519 | 4.80e-58 | 204 |
MS.gene022245.t1 | AT5G01190 | 30.864 | 567 | 314 | 19 | 26 | 569 | 25 | 536 | 3.61e-57 | 202 |
MS.gene022245.t1 | AT5G58910 | 29.422 | 554 | 306 | 17 | 41 | 569 | 8 | 501 | 6.68e-57 | 200 |
MS.gene022245.t1 | AT2G38080 | 30.404 | 569 | 338 | 20 | 13 | 569 | 14 | 536 | 1.50e-56 | 200 |
MS.gene022245.t1 | AT5G01050 | 29.776 | 581 | 329 | 21 | 16 | 569 | 18 | 546 | 3.76e-56 | 199 |
MS.gene022245.t1 | AT5G01190 | 31.079 | 547 | 299 | 19 | 46 | 569 | 31 | 522 | 1.68e-55 | 197 |
MS.gene022245.t1 | AT4G12420 | 27.199 | 614 | 364 | 23 | 1 | 592 | 1 | 553 | 1.32e-54 | 195 |
MS.gene022245.t1 | AT4G12420 | 27.199 | 614 | 364 | 23 | 1 | 592 | 1 | 553 | 1.32e-54 | 195 |
MS.gene022245.t1 | AT4G22010 | 28.351 | 582 | 321 | 19 | 26 | 587 | 26 | 531 | 1.17e-52 | 189 |
MS.gene022245.t1 | AT5G60020 | 30.104 | 578 | 330 | 24 | 1 | 549 | 3 | 535 | 3.33e-52 | 188 |
MS.gene022245.t1 | AT1G55570 | 29.381 | 582 | 314 | 22 | 30 | 587 | 33 | 541 | 4.12e-52 | 188 |
MS.gene022245.t1 | AT1G75790 | 27.508 | 618 | 338 | 22 | 4 | 587 | 1 | 542 | 5.06e-52 | 187 |
MS.gene022245.t1 | AT5G66920 | 26.825 | 548 | 315 | 16 | 28 | 564 | 39 | 511 | 4.23e-51 | 185 |
MS.gene022245.t1 | AT4G28090 | 27.471 | 597 | 351 | 19 | 9 | 590 | 9 | 538 | 1.41e-50 | 183 |
MS.gene022245.t1 | AT1G21860 | 26.734 | 591 | 347 | 17 | 16 | 591 | 16 | 535 | 2.41e-50 | 182 |
MS.gene022245.t1 | AT1G21850 | 26.689 | 592 | 338 | 17 | 16 | 587 | 16 | 531 | 8.21e-50 | 181 |
MS.gene022245.t1 | AT4G25240 | 26.393 | 610 | 368 | 18 | 4 | 592 | 7 | 556 | 2.00e-49 | 181 |
MS.gene022245.t1 | AT4G25240 | 26.393 | 610 | 368 | 18 | 4 | 592 | 7 | 556 | 2.00e-49 | 181 |
MS.gene022245.t1 | AT5G51480 | 26.866 | 603 | 352 | 20 | 16 | 592 | 17 | 556 | 2.22e-49 | 181 |
MS.gene022245.t1 | AT3G13390 | 28.988 | 583 | 315 | 24 | 30 | 587 | 32 | 540 | 8.53e-49 | 179 |
MS.gene022245.t1 | AT1G76160 | 26.087 | 598 | 355 | 17 | 6 | 587 | 5 | 531 | 1.56e-48 | 177 |
MS.gene022245.t1 | AT5G48450 | 25.449 | 613 | 356 | 19 | 9 | 592 | 8 | 548 | 2.03e-47 | 175 |
MS.gene022245.t1 | AT2G46570 | 29.084 | 502 | 297 | 17 | 84 | 569 | 4 | 462 | 2.39e-47 | 173 |
MS.gene022245.t1 | AT5G48450 | 25.449 | 613 | 356 | 19 | 9 | 592 | 8 | 548 | 2.94e-47 | 176 |
MS.gene022245.t1 | AT4G37160 | 25.167 | 600 | 350 | 17 | 13 | 591 | 18 | 539 | 1.16e-46 | 172 |
MS.gene022245.t1 | AT2G23630 | 26.990 | 578 | 328 | 19 | 28 | 587 | 32 | 533 | 2.71e-45 | 169 |
MS.gene022245.t1 | AT2G23630 | 26.990 | 578 | 328 | 19 | 28 | 587 | 37 | 538 | 3.20e-45 | 169 |
MS.gene022245.t1 | AT5G07130 | 28.977 | 528 | 295 | 20 | 92 | 586 | 4 | 484 | 6.54e-44 | 164 |
MS.gene022245.t1 | AT5G07130 | 28.977 | 528 | 295 | 20 | 92 | 586 | 4 | 484 | 6.54e-44 | 164 |
MS.gene022245.t1 | AT1G41830 | 24.370 | 595 | 352 | 18 | 16 | 587 | 13 | 532 | 1.30e-41 | 158 |
MS.gene022245.t1 | AT4G38420 | 24.831 | 592 | 357 | 17 | 19 | 590 | 20 | 543 | 1.48e-39 | 152 |
MS.gene022245.t1 | AT3G09220 | 28.200 | 500 | 276 | 19 | 100 | 569 | 2 | 448 | 2.90e-39 | 150 |
MS.gene022245.t1 | AT3G13400 | 25.690 | 580 | 340 | 18 | 2 | 564 | 5 | 510 | 6.67e-39 | 150 |
MS.gene022245.t1 | AT3G13400 | 25.690 | 580 | 340 | 18 | 2 | 564 | 5 | 510 | 6.67e-39 | 150 |
MS.gene022245.t1 | AT1G55560 | 25.865 | 549 | 328 | 17 | 28 | 564 | 28 | 509 | 1.92e-38 | 149 |
MS.gene022245.t1 | AT4G37160 | 24.952 | 521 | 296 | 17 | 3 | 506 | 7 | 449 | 5.62e-34 | 135 |
MS.gene022245.t1 | AT4G38420 | 24.528 | 530 | 317 | 15 | 19 | 533 | 20 | 481 | 2.61e-31 | 128 |
MS.gene022245.t1 | AT4G38420 | 24.453 | 503 | 297 | 15 | 19 | 506 | 20 | 454 | 3.12e-28 | 118 |
Find 135 sgRNAs with CRISPR-Local
Find 350 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTTGACACGTGCACCTTTA+AGG | 0.136465 | 3.3:+66675391 | MS.gene022245:CDS |
CTGAGGGTGTTCACAAAATT+AGG | 0.188685 | 3.3:+66675538 | MS.gene022245:CDS |
CCGTTACCGGTAGTTGTATT+TGG | 0.192418 | 3.3:-66675201 | None:intergenic |
GTGATTGGTGGTGGTGAGTT+TGG | 0.204305 | 3.3:-66674892 | None:intergenic |
AAAACAAATCATTTCCAAAA+TGG | 0.220018 | 3.3:+66674954 | MS.gene022245:CDS |
GGCTTCACTTGAAGAATATA+TGG | 0.242944 | 3.3:-66674184 | None:intergenic |
CATATGGTTGGACTGCATTA+AGG | 0.257525 | 3.3:+66675433 | MS.gene022245:CDS |
AATGGCTCTTTATGCCTCTT+TGG | 0.282560 | 3.3:-66671255 | None:intergenic |
GTAGTTGTATTTGGATTAAC+TGG | 0.289880 | 3.3:-66675192 | None:intergenic |
ACAACCACGGTGTTCCTTAA+AGG | 0.291405 | 3.3:-66675405 | None:intergenic |
CACTACCATTCCCATGTAAC+TGG | 0.296143 | 3.3:-66675278 | None:intergenic |
TGGCTGTGGAGTTCCCATTT+TGG | 0.299259 | 3.3:-66674968 | None:intergenic |
TGATTGGTGGTGGTGAGTTT+GGG | 0.300160 | 3.3:-66674891 | None:intergenic |
TGGATTGCAATTGGTGTTAG+AGG | 0.327840 | 3.3:+66674727 | MS.gene022245:CDS |
AGGCAGATAATCCTGGTGTT+TGG | 0.327845 | 3.3:+66675460 | MS.gene022245:CDS |
TTGTATGGTGTATATGGTTT+GGG | 0.330107 | 3.3:+66670351 | MS.gene022245:CDS |
CACCACCAATCACTCCATTA+TGG | 0.348399 | 3.3:+66674902 | MS.gene022245:CDS |
TGTGAATGCTTTGCTATGTT+TGG | 0.349636 | 3.3:-66674932 | None:intergenic |
CTCAATGAAGGGTGTCGTTT+AGG | 0.351859 | 3.3:-66675608 | None:intergenic |
ATCACCTTTGAAATTACATT+GGG | 0.353634 | 3.3:-66674149 | None:intergenic |
GGGATGTTTGAGCTATCATT+TGG | 0.355283 | 3.3:+66670371 | MS.gene022245:CDS |
CATTAATCACCTTGTCAACT+TGG | 0.360849 | 3.3:-66670792 | None:intergenic |
ATTTCGTGAAACTACCGATT+AGG | 0.361547 | 3.3:-66675035 | None:intergenic |
TAATCGGTAGTTTCACGAAA+TGG | 0.362616 | 3.3:+66675037 | MS.gene022245:CDS |
ATCTGCTCCTCAGTGATCTA+TGG | 0.363548 | 3.3:+66671298 | MS.gene022245:CDS |
CATTGAACAACATTTGCATA+TGG | 0.364666 | 3.3:+66675497 | MS.gene022245:CDS |
TCTGACTCAATCGGTGTTAG+AGG | 0.366295 | 3.3:+66674802 | MS.gene022245:CDS |
TTAAATATGTCATAATCCTT+TGG | 0.368436 | 3.3:-66675165 | None:intergenic |
GGAATCAATGGTCAGTTTCC+TGG | 0.370438 | 3.3:+66670470 | MS.gene022245:CDS |
GGCAGATAATCCTGGTGTTT+GGG | 0.374826 | 3.3:+66675461 | MS.gene022245:CDS |
ATCCTGCGGTGTGAGAATTT+TGG | 0.380966 | 3.3:-66674991 | None:intergenic |
TTTGTATGGTGTATATGGTT+TGG | 0.381937 | 3.3:+66670350 | MS.gene022245:CDS |
GTTAAACCTTGTGGCGTGTT+TGG | 0.401829 | 3.3:-66674832 | None:intergenic |
AAACATGTAAACACCGTTAC+CGG | 0.405766 | 3.3:-66675214 | None:intergenic |
TGTTGGTAACATTAATGATA+AGG | 0.406661 | 3.3:-66670523 | None:intergenic |
GTTGGTAACATTAATGATAA+GGG | 0.411709 | 3.3:-66670522 | None:intergenic |
GTTTGCAGCGTGGAACTCCT+TGG | 0.412682 | 3.3:+66670704 | MS.gene022245:intron |
TCCTTCTGTAGAAAGATTGT+TGG | 0.412761 | 3.3:-66670540 | None:intergenic |
AAACAAATCATTTCCAAAAT+GGG | 0.418944 | 3.3:+66674955 | MS.gene022245:CDS |
TGTTTGGTATCATTCCATAA+TGG | 0.420105 | 3.3:-66674916 | None:intergenic |
TATTTCTATCATGGACACTA+TGG | 0.424783 | 3.3:+66671186 | MS.gene022245:CDS |
CTCAACACACAAAACCTAAT+CGG | 0.428454 | 3.3:+66675021 | MS.gene022245:CDS |
TATTTGATTGATCCTAAGTA+AGG | 0.430267 | 3.3:-66675096 | None:intergenic |
TTGTATTGAAAAGTTTCTCC+TGG | 0.430789 | 3.3:-66670766 | None:intergenic |
TTTGGAAATGTCTCTGGTGG+TGG | 0.431712 | 3.3:-66675147 | None:intergenic |
CAACTTCAGCTCTGATAGTT+GGG | 0.433763 | 3.3:-66670493 | None:intergenic |
CTTAATGCAGTCCAACCATA+TGG | 0.434255 | 3.3:-66675432 | None:intergenic |
AAAGAGCCATTTCATTATGA+TGG | 0.435519 | 3.3:+66671267 | MS.gene022245:CDS |
AACTCACCATCATAATGAAA+TGG | 0.437277 | 3.3:-66671273 | None:intergenic |
TTTGCAGCGTGGAACTCCTT+GGG | 0.437651 | 3.3:+66670705 | MS.gene022245:intron |
GGTTCACCGGTCCATCTCAT+TGG | 0.443786 | 3.3:-66671363 | None:intergenic |
CAAAGAGCAGCAGGGTTGTA+TGG | 0.444015 | 3.3:+66671213 | MS.gene022245:CDS |
TTTCAGACACTGCTCATCAA+TGG | 0.444816 | 3.3:+66674073 | MS.gene022245:intron |
TTAAGGATTGTTAGGGCTTG+TGG | 0.446548 | 3.3:-66674766 | None:intergenic |
ATTGAACAACATTTGCATAT+GGG | 0.447437 | 3.3:+66675498 | MS.gene022245:CDS |
ACCGTGGTTGTATTTCCATA+TGG | 0.456218 | 3.3:+66675417 | MS.gene022245:CDS |
TAATCCTTTGGAAATGTCTC+TGG | 0.456862 | 3.3:-66675153 | None:intergenic |
CCAACTTCAGCTCTGATAGT+TGG | 0.458597 | 3.3:-66670494 | None:intergenic |
AATCGGTAGTTTCACGAAAT+GGG | 0.458692 | 3.3:+66675038 | MS.gene022245:CDS |
TCATTCCATAATGGAGTGAT+TGG | 0.463471 | 3.3:-66674907 | None:intergenic |
GATCCTAAGTAAGGTGTTGT+TGG | 0.466961 | 3.3:-66675087 | None:intergenic |
TTGGACTGCATTAAGGTTCA+AGG | 0.470182 | 3.3:+66675440 | MS.gene022245:CDS |
CATCACCTTTGAAATTACAT+TGG | 0.470295 | 3.3:-66674150 | None:intergenic |
TTTGTAGTTAAGGATTGTTA+GGG | 0.470399 | 3.3:-66674773 | None:intergenic |
CATGGTACATATTTCTATCA+TGG | 0.481061 | 3.3:+66671177 | MS.gene022245:CDS |
CAGAATGCAAACCAGTTACA+TGG | 0.482253 | 3.3:+66675267 | MS.gene022245:CDS |
CGTGGAACTCCTTGGGCTGA+TGG | 0.482269 | 3.3:+66670712 | MS.gene022245:CDS |
ACCACATGCTCTAAGCAATC+TGG | 0.487710 | 3.3:-66670443 | None:intergenic |
TATGGTATGCAAAGAGCAGC+AGG | 0.488270 | 3.3:+66671204 | MS.gene022245:CDS |
TTGCCAACAACACCTTACTT+AGG | 0.489614 | 3.3:+66675084 | MS.gene022245:CDS |
AAAACAATCTCTGACTCAAT+CGG | 0.491178 | 3.3:+66674793 | MS.gene022245:CDS |
CTTTGAAATTACATTGGGGT+AGG | 0.493306 | 3.3:-66674144 | None:intergenic |
TCTTCACAAATTTAGCTGCC+AGG | 0.508771 | 3.3:-66674117 | None:intergenic |
TGGTTGTATTTCCATATGGT+TGG | 0.513701 | 3.3:+66675421 | MS.gene022245:CDS |
TCAATGTCATCGACTGCGAA+TGG | 0.514346 | 3.3:-66674640 | None:intergenic |
AATGTATACCTGTGGTTCAC+CGG | 0.516965 | 3.3:-66671376 | None:intergenic |
CAATGTCATCGACTGCGAAT+GGG | 0.518080 | 3.3:-66674639 | None:intergenic |
ACAACATTTGCATATGGGAA+TGG | 0.521997 | 3.3:+66675503 | MS.gene022245:CDS |
TTAAGGTTTGTTAAACCTTG+TGG | 0.529917 | 3.3:-66674841 | None:intergenic |
CCAAATACAACTACCGGTAA+CGG | 0.532128 | 3.3:+66675201 | MS.gene022245:CDS |
TCTCTTCAGCTCCAATGAGA+TGG | 0.532184 | 3.3:+66671352 | MS.gene022245:CDS |
CAGAAGGAACTGTTATTCAC+TGG | 0.532868 | 3.3:+66670555 | MS.gene022245:CDS |
CAATGAAACGCCCAAACACC+AGG | 0.533302 | 3.3:-66675471 | None:intergenic |
CTTCACAAATTTAGCTGCCA+GGG | 0.534636 | 3.3:-66674116 | None:intergenic |
GTTAATCCAAATACAACTAC+CGG | 0.535206 | 3.3:+66675195 | MS.gene022245:CDS |
ACCAACAATCTTTCTACAGA+AGG | 0.538143 | 3.3:+66670539 | MS.gene022245:CDS |
TTGCTTAGAGCATGTGGTGA+TGG | 0.538505 | 3.3:+66670448 | MS.gene022245:CDS |
TTTGAAATTACATTGGGGTA+GGG | 0.539787 | 3.3:-66674143 | None:intergenic |
TCTCAGTGTGCTATAAATCC+AGG | 0.548391 | 3.3:+66670748 | MS.gene022245:CDS |
TCAGCTCCAATGAGATGGAC+CGG | 0.549768 | 3.3:+66671357 | MS.gene022245:CDS |
CAACATTTGCATATGGGAAT+GGG | 0.550546 | 3.3:+66675504 | MS.gene022245:CDS |
TGAGTAACTAGTCTCAATGA+AGG | 0.552455 | 3.3:-66675620 | None:intergenic |
GGTGTCGTTTAGGAACATCT+TGG | 0.554463 | 3.3:-66675598 | None:intergenic |
TCAGCTCTGATAGTTGGGCC+AGG | 0.554876 | 3.3:-66670488 | None:intergenic |
AGGTTCAAGGCAGATAATCC+TGG | 0.555260 | 3.3:+66675453 | MS.gene022245:CDS |
ATTCATCCATGGCATTTGCA+TGG | 0.556495 | 3.3:+66675303 | MS.gene022245:CDS |
GGAACTGTTATTCACTGGCA+TGG | 0.556886 | 3.3:+66670560 | MS.gene022245:CDS |
GCAAACCAGTTACATGGGAA+TGG | 0.558379 | 3.3:+66675273 | MS.gene022245:CDS |
AGGACAATTCAATTGTTCCC+TGG | 0.563840 | 3.3:+66674099 | MS.gene022245:CDS |
GAAATTACATTGGGGTAGGG+TGG | 0.566061 | 3.3:-66674140 | None:intergenic |
GAGATGGACCGGTGAACCAC+AGG | 0.571005 | 3.3:+66671368 | MS.gene022245:CDS |
CACCAAAATTCTCACACCGC+AGG | 0.571410 | 3.3:+66674989 | MS.gene022245:CDS |
CCAACTATCAGAGCTGAAGT+TGG | 0.571850 | 3.3:+66670494 | MS.gene022245:CDS |
CTTGTTGTAGTAGAAGCAGA+TGG | 0.582483 | 3.3:+66674604 | MS.gene022245:CDS |
CACAAGCTCACGTGAACAAG+AGG | 0.584256 | 3.3:+66671323 | MS.gene022245:CDS |
ACCAGATTGCTTAGAGCATG+TGG | 0.585181 | 3.3:+66670442 | MS.gene022245:CDS |
GATGACATTGATATCTACTC+AGG | 0.587375 | 3.3:+66674652 | MS.gene022245:CDS |
TCACTGGCATGGAATCAGAC+AGG | 0.589797 | 3.3:+66670571 | MS.gene022245:CDS |
CTACCCCAATGTAATTTCAA+AGG | 0.592553 | 3.3:+66674145 | MS.gene022245:CDS |
CATGTGGTGATGGGAATCAA+TGG | 0.593479 | 3.3:+66670458 | MS.gene022245:CDS |
TGCTTAGAGCATGTGGTGAT+GGG | 0.598971 | 3.3:+66670449 | MS.gene022245:CDS |
TTCCATAATGGAGTGATTGG+TGG | 0.606846 | 3.3:-66674904 | None:intergenic |
TCATGTCCATGCAAATGCCA+TGG | 0.613062 | 3.3:-66675309 | None:intergenic |
AGCTCACGTGAACAAGAGGT+TGG | 0.616753 | 3.3:+66671327 | MS.gene022245:CDS |
AGAAAACCAAACACGCCACA+AGG | 0.625328 | 3.3:+66674826 | MS.gene022245:CDS |
GTCATTAGCTTCTCTCAACA+TGG | 0.626821 | 3.3:+66674243 | MS.gene022245:CDS |
ATCTCATTGGAGCTGAAGAG+AGG | 0.627315 | 3.3:-66671350 | None:intergenic |
CATAATGGAGTGATTGGTGG+TGG | 0.630467 | 3.3:-66674901 | None:intergenic |
ATGGTAGTGAAATTCATCCA+TGG | 0.631220 | 3.3:+66675292 | MS.gene022245:CDS |
ACCACCAGAGACATTTCCAA+AGG | 0.631679 | 3.3:+66675149 | MS.gene022245:CDS |
TAATAGTAGATTTACCAAAG+AGG | 0.633241 | 3.3:+66671241 | MS.gene022245:CDS |
GAGTAACTAGTCTCAATGAA+GGG | 0.635616 | 3.3:-66675619 | None:intergenic |
TCCTTTGGAAATGTCTCTGG+TGG | 0.636748 | 3.3:-66675150 | None:intergenic |
AGAATGCAAACCAGTTACAT+GGG | 0.646441 | 3.3:+66675268 | MS.gene022245:CDS |
GCAGCAGTTCCATCAGCCCA+AGG | 0.647903 | 3.3:-66670721 | None:intergenic |
ATACAAATTCCAAGTTGACA+AGG | 0.659152 | 3.3:+66670783 | MS.gene022245:CDS |
CCTACAGAAGCTCTTACTTG+TGG | 0.668732 | 3.3:+66675567 | MS.gene022245:CDS |
ACACTGCTCATCAATGGACG+AGG | 0.682587 | 3.3:+66674079 | MS.gene022245:CDS |
ATGGTATGCAAAGAGCAGCA+GGG | 0.689403 | 3.3:+66671205 | MS.gene022245:CDS |
ACCATATGGAAATACAACCA+CGG | 0.699908 | 3.3:-66675418 | None:intergenic |
CCACAAGTAAGAGCTTCTGT+AGG | 0.711257 | 3.3:-66675567 | None:intergenic |
TCACCTTTGAAATTACATTG+GGG | 0.718792 | 3.3:-66674148 | None:intergenic |
TGTTGAGGAGAAGAATCCTG+CGG | 0.770585 | 3.3:-66675005 | None:intergenic |
TGCACCTTTAAGGAACACCG+TGG | 0.772778 | 3.3:+66675401 | MS.gene022245:CDS |
TTGTGTGCCATAGATCACTG+AGG | 0.786407 | 3.3:-66671305 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATATATATATATATATAT+AGG | - | chr3.3:66671456-66671437 | None:intergenic | 0.0% |
!! | ATATATATATATATATATAT+GGG | + | chr3.3:66671437-66671456 | MS.gene022245:intron | 0.0% |
!! | TATATATATATATATATATA+GGG | - | chr3.3:66671457-66671438 | None:intergenic | 0.0% |
!! | TATATATATATATATATATA+TGG | + | chr3.3:66671438-66671457 | MS.gene022245:intron | 0.0% |
!! | AAAAAAATAAAAAATACACA+CGG | - | chr3.3:66670964-66670983 | None:intergenic | 10.0% |
!! | ATACTAAGTATATTATAAAA+GGG | + | chr3.3:66673787-66673806 | MS.gene022245:intron | 10.0% |
!! | TAGAAATAAAAAAATATTGA+GGG | - | chr3.3:66673084-66673103 | None:intergenic | 10.0% |
!! | TAGATAATTAAAGATATTAA+CGG | + | chr3.3:66672396-66672415 | MS.gene022245:intron | 10.0% |
!! | TATACTAAGTATATTATAAA+AGG | + | chr3.3:66673786-66673805 | MS.gene022245:intron | 10.0% |
!! | TATATATATATATATATAGG+GGG | - | chr3.3:66671757-66671776 | None:intergenic | 10.0% |
!! | TTAATTTAATATTGCTTTAA+CGG | + | chr3.3:66671125-66671144 | MS.gene022245:intron | 10.0% |
!! | TTAGAAATAAAAAAATATTG+AGG | - | chr3.3:66673085-66673104 | None:intergenic | 10.0% |
!! | TTTATAATATACTTAGTATA+AGG | - | chr3.3:66673786-66673805 | None:intergenic | 10.0% |
!!! | ATGAATTATTTTTTCTTAAA+TGG | + | chr3.3:66673406-66673425 | MS.gene022245:intron | 10.0% |
!!! | TTGTTTCATATTTTATAATA+GGG | - | chr3.3:66673244-66673263 | None:intergenic | 10.0% |
!! | AAAAAATGTGACATAAAAAT+AGG | - | chr3.3:66672689-66672708 | None:intergenic | 15.0% |
!! | AAAAACGAATAGAATAATTT+AGG | + | chr3.3:66674382-66674401 | MS.gene022245:intron | 15.0% |
!! | ACATATTTAATTATTAAGGA+AGG | + | chr3.3:66673491-66673510 | MS.gene022245:intron | 15.0% |
!! | ATATTTAATTATTAAGGAAG+GGG | + | chr3.3:66673493-66673512 | MS.gene022245:intron | 15.0% |
!! | ATTCGAAAAAAATTGTATTA+CGG | + | chr3.3:66673137-66673156 | MS.gene022245:intron | 15.0% |
!! | CATATTTAATTATTAAGGAA+GGG | + | chr3.3:66673492-66673511 | MS.gene022245:intron | 15.0% |
!! | GTAATTAACTCATATTAAAA+CGG | + | chr3.3:66673659-66673678 | MS.gene022245:intron | 15.0% |
!! | TAATTTAATATTGCTTTAAC+GGG | + | chr3.3:66671126-66671145 | MS.gene022245:intron | 15.0% |
!! | TACTAAGTATATTATAAAAG+GGG | + | chr3.3:66673788-66673807 | MS.gene022245:intron | 15.0% |
!! | TATACATTAGTTAAAAAGTA+TGG | - | chr3.3:66672293-66672312 | None:intergenic | 15.0% |
!! | TTACTAAAGACAATAAAATA+GGG | + | chr3.3:66673293-66673312 | MS.gene022245:intron | 15.0% |
!! | TTCAGATTAATAAGAAATTA+TGG | + | chr3.3:66671021-66671040 | MS.gene022245:intron | 15.0% |
!! | TTTACTAAAGACAATAAAAT+AGG | + | chr3.3:66673292-66673311 | MS.gene022245:intron | 15.0% |
!! | TTTGTTTCAATTATTTGATT+GGG | + | chr3.3:66672748-66672767 | MS.gene022245:intron | 15.0% |
!!! | AATTATTTTTTCTTAAATGG+TGG | + | chr3.3:66673409-66673428 | MS.gene022245:intron | 15.0% |
!!! | ATTGTAAATATTTTCTCTTT+GGG | - | chr3.3:66672108-66672127 | None:intergenic | 15.0% |
!!! | ATTGTATATTTTAACATAAG+AGG | - | chr3.3:66672944-66672963 | None:intergenic | 15.0% |
!!! | ATTTATTTCAGTTGTTTTAT+TGG | - | chr3.3:66672011-66672030 | None:intergenic | 15.0% |
!!! | CTAATATATTTTGAATAAGA+GGG | - | chr3.3:66672982-66673001 | None:intergenic | 15.0% |
!!! | GTTGTTTCATATTTTATAAT+AGG | - | chr3.3:66673245-66673264 | None:intergenic | 15.0% |
!!! | TAAATTATTCTATTCGTTTT+TGG | - | chr3.3:66674383-66674402 | None:intergenic | 15.0% |
!!! | TAATATATTTTGAATAAGAG+GGG | - | chr3.3:66672981-66673000 | None:intergenic | 15.0% |
!!! | TATTATTTGTTTTTATCATG+TGG | + | chr3.3:66672524-66672543 | MS.gene022245:intron | 15.0% |
!!! | TATTGTAAATATTTTCTCTT+TGG | - | chr3.3:66672109-66672128 | None:intergenic | 15.0% |
!!! | TCTAATATATTTTGAATAAG+AGG | - | chr3.3:66672983-66673002 | None:intergenic | 15.0% |
!!! | TTGTATATTTTAACATAAGA+GGG | - | chr3.3:66672943-66672962 | None:intergenic | 15.0% |
!! | AAAAATAGGAATAGGAAATT+GGG | - | chr3.3:66672675-66672694 | None:intergenic | 20.0% |
!! | AAAACAAATCATTTCCAAAA+TGG | + | chr3.3:66674954-66674973 | MS.gene022245:CDS | 20.0% |
!! | AAACAAATCATTTCCAAAAT+GGG | + | chr3.3:66674955-66674974 | MS.gene022245:CDS | 20.0% |
!! | AAAGTTTAATAGAGACAAAA+TGG | + | chr3.3:66671656-66671675 | MS.gene022245:intron | 20.0% |
!! | ATTATGTACAATTCTTCAAT+GGG | - | chr3.3:66673823-66673842 | None:intergenic | 20.0% |
!! | CAAATGCATAATATGATAAA+AGG | + | chr3.3:66672780-66672799 | MS.gene022245:intron | 20.0% |
!! | GAATAGAATAATTTAGGTAA+CGG | + | chr3.3:66674388-66674407 | MS.gene022245:intron | 20.0% |
!! | GTAATTCAAACATCTTATAA+GGG | + | chr3.3:66673519-66673538 | MS.gene022245:intron | 20.0% |
!! | GTTTGTTTCAATTATTTGAT+TGG | + | chr3.3:66672747-66672766 | MS.gene022245:intron | 20.0% |
!! | TAAAAATAGGAATAGGAAAT+TGG | - | chr3.3:66672676-66672695 | None:intergenic | 20.0% |
!! | TATAGTAATATGTAAATCTC+CGG | - | chr3.3:66674349-66674368 | None:intergenic | 20.0% |
!! | TATTAAATTAAACACACAGT+TGG | - | chr3.3:66671116-66671135 | None:intergenic | 20.0% |
!! | TATTTAATTATTAAGGAAGG+GGG | + | chr3.3:66673494-66673513 | MS.gene022245:intron | 20.0% |
!! | TGTAATTCAAACATCTTATA+AGG | + | chr3.3:66673518-66673537 | MS.gene022245:intron | 20.0% |
!! | TTAAATATGTCATAATCCTT+TGG | - | chr3.3:66675168-66675187 | None:intergenic | 20.0% |
!!! | AAAAAAAAAAAAGGTGTGAA+AGG | + | chr3.3:66674430-66674449 | MS.gene022245:intron | 20.0% |
!!! | AATCTTCTTTTCTTATTTGT+AGG | - | chr3.3:66672056-66672075 | None:intergenic | 20.0% |
!!! | AGTATAAATTTTACTTTGCA+AGG | + | chr3.3:66673547-66673566 | MS.gene022245:intron | 20.0% |
!!! | AGTGTATATTTTAACATAAG+AGG | + | chr3.3:66673594-66673613 | MS.gene022245:intron | 20.0% |
!!! | ATATTTTTTTTCGACAAAGA+TGG | - | chr3.3:66674306-66674325 | None:intergenic | 20.0% |
!!! | GTGTATATTTTAACATAAGA+GGG | + | chr3.3:66673595-66673614 | MS.gene022245:intron | 20.0% |
!!! | TAATTTTGATCATTCTAATC+TGG | - | chr3.3:66672174-66672193 | None:intergenic | 20.0% |
!!! | TGGAATAAAAATTAGTTTGT+GGG | - | chr3.3:66673897-66673916 | None:intergenic | 20.0% |
!!! | TGTATATTTTAACATAAGAG+GGG | + | chr3.3:66673596-66673615 | MS.gene022245:intron | 20.0% |
!!! | TGTGTGAATATTTTTTCTTT+GGG | + | chr3.3:66672623-66672642 | MS.gene022245:intron | 20.0% |
!!! | TTAACTATGCGTTTTTATAA+TGG | - | chr3.3:66674002-66674021 | None:intergenic | 20.0% |
!!! | TTTATGTTGCCAATTTTTAT+TGG | + | chr3.3:66673929-66673948 | MS.gene022245:intron | 20.0% |
! | AACACAAATAAATGTGGATA+TGG | + | chr3.3:66672805-66672824 | MS.gene022245:intron | 25.0% |
! | AAGGAAAACACAAATAAATG+TGG | + | chr3.3:66672799-66672818 | MS.gene022245:intron | 25.0% |
! | AATGCTAATTACAATTAGAC+TGG | - | chr3.3:66670645-66670664 | None:intergenic | 25.0% |
! | AGATCAAAAACTTACTGAAA+TGG | - | chr3.3:66674269-66674288 | None:intergenic | 25.0% |
! | AGTACAGTTTGTATGAAAAA+TGG | - | chr3.3:66671083-66671102 | None:intergenic | 25.0% |
! | ATAGTAATATGTAAATCTCC+GGG | - | chr3.3:66674348-66674367 | None:intergenic | 25.0% |
! | ATAGTGCATATTGCAAAAAT+TGG | - | chr3.3:66672252-66672271 | None:intergenic | 25.0% |
! | ATGTAATTCAAGATTCTCTT+AGG | - | chr3.3:66673025-66673044 | None:intergenic | 25.0% |
! | ATTCAACCACCAATAAAAAT+TGG | - | chr3.3:66673941-66673960 | None:intergenic | 25.0% |
! | ATTGAACAACATTTGCATAT+GGG | + | chr3.3:66675498-66675517 | MS.gene022245:CDS | 25.0% |
! | GATTATGTACAATTCTTCAA+TGG | - | chr3.3:66673824-66673843 | None:intergenic | 25.0% |
! | GTACAGTTTGTATGAAAAAT+GGG | - | chr3.3:66671082-66671101 | None:intergenic | 25.0% |
! | TAATAGTAGATTTACCAAAG+AGG | + | chr3.3:66671241-66671260 | MS.gene022245:CDS | 25.0% |
! | TATTTGATTGATCCTAAGTA+AGG | - | chr3.3:66675099-66675118 | None:intergenic | 25.0% |
! | TGTAATTCAAGATTCTCTTA+GGG | - | chr3.3:66673024-66673043 | None:intergenic | 25.0% |
! | TGTGACATAAAAATAGGAAT+AGG | - | chr3.3:66672683-66672702 | None:intergenic | 25.0% |
! | TTAAGAAAGACTTGACTAAT+AGG | + | chr3.3:66674461-66674480 | MS.gene022245:intron | 25.0% |
! | TTTAATTCAAGCATCTTTGA+GGG | + | chr3.3:66673627-66673646 | MS.gene022245:intron | 25.0% |
! | TTTGTAGTTAAGGATTGTTA+GGG | - | chr3.3:66674776-66674795 | None:intergenic | 25.0% |
!! | AAATTTTACTTTGCAAGGAA+GGG | + | chr3.3:66673552-66673571 | MS.gene022245:intron | 25.0% |
!! | GATTTTCACGAAAAATATGA+AGG | - | chr3.3:66671962-66671981 | None:intergenic | 25.0% |
!! | GTGGAATAAAAATTAGTTTG+TGG | - | chr3.3:66673898-66673917 | None:intergenic | 25.0% |
!! | TAAATTTTACTTTGCAAGGA+AGG | + | chr3.3:66673551-66673570 | MS.gene022245:intron | 25.0% |
!! | TTTTGTAGTTAAGGATTGTT+AGG | - | chr3.3:66674777-66674796 | None:intergenic | 25.0% |
!!! | AACATAAACTAACTTGTTAG+TGG | - | chr3.3:66673917-66673936 | None:intergenic | 25.0% |
!!! | AGTCTTTCTTTTTTGTTAAG+TGG | + | chr3.3:66672585-66672604 | MS.gene022245:intron | 25.0% |
!!! | AGTGTAGATTTTAACATAAG+AGG | - | chr3.3:66673056-66673075 | None:intergenic | 25.0% |
!!! | ATATTTTAACATAAGAGGGA+AGG | - | chr3.3:66672939-66672958 | None:intergenic | 25.0% |
!!! | ATATTTTTTCTTTGGGTCAA+TGG | + | chr3.3:66672630-66672649 | MS.gene022245:intron | 25.0% |
!!! | ATCACCTTTGAAATTACATT+GGG | - | chr3.3:66674152-66674171 | None:intergenic | 25.0% |
!!! | ATTTCAGTTGTTTTATTGGA+TGG | - | chr3.3:66672007-66672026 | None:intergenic | 25.0% |
!!! | CTGTGTGAATATTTTTTCTT+TGG | + | chr3.3:66672622-66672641 | MS.gene022245:intron | 25.0% |
!!! | GACATAGAATCCTTTATTTT+TGG | + | chr3.3:66673734-66673753 | MS.gene022245:intron | 25.0% |
!!! | GTATATTTTAACATAAGAGG+GGG | + | chr3.3:66673597-66673616 | MS.gene022245:intron | 25.0% |
!!! | GTGTAGATTTTAACATAAGA+GGG | - | chr3.3:66673055-66673074 | None:intergenic | 25.0% |
!!! | GTTGGTAACATTAATGATAA+GGG | - | chr3.3:66670525-66670544 | None:intergenic | 25.0% |
!!! | TATTTTTTCTTTGGGTCAAT+GGG | + | chr3.3:66672631-66672650 | MS.gene022245:intron | 25.0% |
!!! | TCACAAATAAAAAGTACCAT+TGG | + | chr3.3:66672836-66672855 | MS.gene022245:intron | 25.0% |
!!! | TGGAATAAATCTTTTTTTCC+TGG | - | chr3.3:66672154-66672173 | None:intergenic | 25.0% |
!!! | TGTAGATTTTAACATAAGAG+GGG | - | chr3.3:66673054-66673073 | None:intergenic | 25.0% |
!!! | TGTTGGTAACATTAATGATA+AGG | - | chr3.3:66670526-66670545 | None:intergenic | 25.0% |
!!! | TGTTTTGGTAAATAACTAGT+AGG | - | chr3.3:66671569-66671588 | None:intergenic | 25.0% |
AAAAACTACTGGATTGCAAT+TGG | + | chr3.3:66674718-66674737 | MS.gene022245:CDS | 30.0% | |
AAAACAATCTCTGACTCAAT+CGG | + | chr3.3:66674793-66674812 | MS.gene022245:CDS | 30.0% | |
AAAAGTTGAATGTATACCTG+TGG | - | chr3.3:66671387-66671406 | None:intergenic | 30.0% | |
AAAATGCTAGATATCACGAA+TGG | - | chr3.3:66671984-66672003 | None:intergenic | 30.0% | |
AAAGAGCCATTTCATTATGA+TGG | + | chr3.3:66671267-66671286 | MS.gene022245:CDS | 30.0% | |
AAAGGATTCTATGTCTAGAA+GGG | - | chr3.3:66673729-66673748 | None:intergenic | 30.0% | |
AACATTAATATGTTAGGGTG+TGG | - | chr3.3:66671055-66671074 | None:intergenic | 30.0% | |
AACTCACCATCATAATGAAA+TGG | - | chr3.3:66671276-66671295 | None:intergenic | 30.0% | |
ACATTAATATGTTAGGGTGT+GGG | - | chr3.3:66671054-66671073 | None:intergenic | 30.0% | |
ATATAATAATGTTTGCAGCG+TGG | + | chr3.3:66670694-66670713 | MS.gene022245:intron | 30.0% | |
ATTCAAACATCTTATAAGGG+AGG | + | chr3.3:66673522-66673541 | MS.gene022245:intron | 30.0% | |
CAAAAAAGACTTACAGAGTA+AGG | + | chr3.3:66674206-66674225 | MS.gene022245:CDS | 30.0% | |
CATTGAACAACATTTGCATA+TGG | + | chr3.3:66675497-66675516 | MS.gene022245:CDS | 30.0% | |
CCAATTCACTGTACTAAAAT+TGG | - | chr3.3:66673702-66673721 | None:intergenic | 30.0% | |
CCATATACACCATACAAAAA+TGG | - | chr3.3:66670348-66670367 | None:intergenic | 30.0% | |
CTAACTGAGTCCAAAAATAA+AGG | - | chr3.3:66673747-66673766 | None:intergenic | 30.0% | |
GCTGGAACATTAATATGTTA+GGG | - | chr3.3:66671060-66671079 | None:intergenic | 30.0% | |
GTAAATCAAGCATCTTAGAA+AGG | - | chr3.3:66672911-66672930 | None:intergenic | 30.0% | |
GTAATTCAAGATTCTCTTAG+GGG | - | chr3.3:66673023-66673042 | None:intergenic | 30.0% | |
GTAGTTGTATTTGGATTAAC+TGG | - | chr3.3:66675195-66675214 | None:intergenic | 30.0% | |
GTTAATCCAAATACAACTAC+CGG | + | chr3.3:66675195-66675214 | MS.gene022245:CDS | 30.0% | |
GTTCATTCAATTTACACAAG+TGG | + | chr3.3:66671888-66671907 | MS.gene022245:intron | 30.0% | |
GTTTAATTCAAGCATCTTTG+AGG | + | chr3.3:66673626-66673645 | MS.gene022245:intron | 30.0% | |
TAAAGGATTCTATGTCTAGA+AGG | - | chr3.3:66673730-66673749 | None:intergenic | 30.0% | |
TAATTACCATAGTGTGTGAT+AGG | - | chr3.3:66674049-66674068 | None:intergenic | 30.0% | |
TGGGTGTTTGATTATACTTA+CGG | + | chr3.3:66671149-66671168 | MS.gene022245:intron | 30.0% | |
TGTTTGGTATCATTCCATAA+TGG | - | chr3.3:66674919-66674938 | None:intergenic | 30.0% | |
TTAATTCAAGCATCTTTGAG+GGG | + | chr3.3:66673628-66673647 | MS.gene022245:intron | 30.0% | |
TTCAAACATCTTATAAGGGA+GGG | + | chr3.3:66673523-66673542 | MS.gene022245:intron | 30.0% | |
TTGTATGGTGTATATGGTTT+GGG | + | chr3.3:66670351-66670370 | MS.gene022245:CDS | 30.0% | |
TTGTATTGAAAAGTTTCTCC+TGG | - | chr3.3:66670769-66670788 | None:intergenic | 30.0% | |
TTTAATATTGCTTTAACGGG+TGG | + | chr3.3:66671129-66671148 | MS.gene022245:intron | 30.0% | |
TTTGTATGGTGTATATGGTT+TGG | + | chr3.3:66670350-66670369 | MS.gene022245:CDS | 30.0% | |
! | AATTTTACTTTGCAAGGAAG+GGG | + | chr3.3:66673553-66673572 | MS.gene022245:intron | 30.0% |
! | ATACAAATTCCAAGTTGACA+AGG | + | chr3.3:66670783-66670802 | MS.gene022245:CDS | 30.0% |
! | ATAGAAAAACACGAGTGTTT+TGG | - | chr3.3:66671584-66671603 | None:intergenic | 30.0% |
! | ATGTTGCCAATTTTTATTGG+TGG | + | chr3.3:66673932-66673951 | MS.gene022245:intron | 30.0% |
! | ATTTGCACCTTAGTGTTTTT+AGG | - | chr3.3:66671534-66671553 | None:intergenic | 30.0% |
! | ATTTGCATGGACATGATTTT+TGG | + | chr3.3:66675316-66675335 | MS.gene022245:CDS | 30.0% |
! | CATGGTACATATTTCTATCA+TGG | + | chr3.3:66671177-66671196 | MS.gene022245:CDS | 30.0% |
! | TATTTCTATCATGGACACTA+TGG | + | chr3.3:66671186-66671205 | MS.gene022245:CDS | 30.0% |
! | TATTTTCTCTTTGGGTGAAT+AGG | - | chr3.3:66672100-66672119 | None:intergenic | 30.0% |
! | TTAATATTGCTTTAACGGGT+GGG | + | chr3.3:66671130-66671149 | MS.gene022245:intron | 30.0% |
! | TTTGAAATTACATTGGGGTA+GGG | - | chr3.3:66674146-66674165 | None:intergenic | 30.0% |
! | TTTGCATGGACATGATTTTT+GGG | + | chr3.3:66675317-66675336 | MS.gene022245:CDS | 30.0% |
! | TTTTAACCTATCACACACTA+TGG | + | chr3.3:66674040-66674059 | MS.gene022245:intron | 30.0% |
! | TTTTCTTTCTCTTGTTCTAG+TGG | + | chr3.3:66670598-66670617 | MS.gene022245:intron | 30.0% |
!! | ATATTTTGAATAAGAGGGGA+TGG | - | chr3.3:66672977-66672996 | None:intergenic | 30.0% |
!! | CAGAGATTGTTTTGTAGTTA+AGG | - | chr3.3:66674786-66674805 | None:intergenic | 30.0% |
!! | CATCACCTTTGAAATTACAT+TGG | - | chr3.3:66674153-66674172 | None:intergenic | 30.0% |
!! | CCAATTTTAGTACAGTGAAT+TGG | + | chr3.3:66673699-66673718 | MS.gene022245:intron | 30.0% |
!! | CCATTTTTGTATGGTGTATA+TGG | + | chr3.3:66670345-66670364 | MS.gene022245:CDS | 30.0% |
!! | CTTGGACATGTATTTTGAAA+TGG | + | chr3.3:66672454-66672473 | MS.gene022245:intron | 30.0% |
!! | TATTTTGAATAAGAGGGGAT+GGG | - | chr3.3:66672976-66672995 | None:intergenic | 30.0% |
!! | TCACCTTTGAAATTACATTG+GGG | - | chr3.3:66674151-66674170 | None:intergenic | 30.0% |
!! | TTAAGGTTTGTTAAACCTTG+TGG | - | chr3.3:66674844-66674863 | None:intergenic | 30.0% |
!!! | ATTTTTTCTTTGGGTCAATG+GGG | + | chr3.3:66672632-66672651 | MS.gene022245:intron | 30.0% |
!!! | CTTACTCTGTAAGTCTTTTT+TGG | - | chr3.3:66674208-66674227 | None:intergenic | 30.0% |
!!! | GACATGTATTTTGAAACTGA+GGG | - | chr3.3:66672230-66672249 | None:intergenic | 30.0% |
!!! | TGTTCTAGTGGTTTTAGTTA+TGG | + | chr3.3:66670610-66670629 | MS.gene022245:intron | 30.0% |
!!! | TGTTTTAATGAGTACTGAGT+AGG | - | chr3.3:66674683-66674702 | None:intergenic | 30.0% |
AAACATGTAAACACCGTTAC+CGG | - | chr3.3:66675217-66675236 | None:intergenic | 35.0% | |
AATCAAGCATCTTAGAAAGG+AGG | - | chr3.3:66672908-66672927 | None:intergenic | 35.0% | |
AATCGGTAGTTTCACGAAAT+GGG | + | chr3.3:66675038-66675057 | MS.gene022245:CDS | 35.0% | |
ACAACATTTGCATATGGGAA+TGG | + | chr3.3:66675503-66675522 | MS.gene022245:CDS | 35.0% | |
ACCAACAATCTTTCTACAGA+AGG | + | chr3.3:66670539-66670558 | MS.gene022245:CDS | 35.0% | |
ACCATATGGAAATACAACCA+CGG | - | chr3.3:66675421-66675440 | None:intergenic | 35.0% | |
AGAATGCAAACCAGTTACAT+GGG | + | chr3.3:66675268-66675287 | MS.gene022245:CDS | 35.0% | |
AGACTCATATTACACATACC+AGG | + | chr3.3:66672133-66672152 | MS.gene022245:intron | 35.0% | |
AGTTTGTATGAAAAATGGGC+TGG | - | chr3.3:66671078-66671097 | None:intergenic | 35.0% | |
ATCAAGCATCTTAGAAAGGA+GGG | - | chr3.3:66672907-66672926 | None:intergenic | 35.0% | |
ATCACTTATTTGTGCACTAG+TGG | + | chr3.3:66670904-66670923 | MS.gene022245:intron | 35.0% | |
CAACATTTGCATATGGGAAT+GGG | + | chr3.3:66675504-66675523 | MS.gene022245:CDS | 35.0% | |
CATTAATCACCTTGTCAACT+TGG | - | chr3.3:66670795-66670814 | None:intergenic | 35.0% | |
CTACCCCAATGTAATTTCAA+AGG | + | chr3.3:66674145-66674164 | MS.gene022245:CDS | 35.0% | |
CTCAACACACAAAACCTAAT+CGG | + | chr3.3:66675021-66675040 | MS.gene022245:CDS | 35.0% | |
CTGCAGCATAGACAAATTAT+GGG | - | chr3.3:66674575-66674594 | None:intergenic | 35.0% | |
GATGACATTGATATCTACTC+AGG | + | chr3.3:66674652-66674671 | MS.gene022245:CDS | 35.0% | |
GGCTGGAACATTAATATGTT+AGG | - | chr3.3:66671061-66671080 | None:intergenic | 35.0% | |
GGCTTCACTTGAAGAATATA+TGG | - | chr3.3:66674187-66674206 | None:intergenic | 35.0% | |
GTACATTGACATATGTGAAG+TGG | + | chr3.3:66672427-66672446 | MS.gene022245:intron | 35.0% | |
TAATCGGTAGTTTCACGAAA+TGG | + | chr3.3:66675037-66675056 | MS.gene022245:CDS | 35.0% | |
TAATGAATTTCCTCCTCTAG+TGG | + | chr3.3:66670810-66670829 | MS.gene022245:intron | 35.0% | |
TCAAACATCTTATAAGGGAG+GGG | + | chr3.3:66673524-66673543 | MS.gene022245:intron | 35.0% | |
TCCTTCTGTAGAAAGATTGT+TGG | - | chr3.3:66670543-66670562 | None:intergenic | 35.0% | |
TCTGCAGCATAGACAAATTA+TGG | - | chr3.3:66674576-66674595 | None:intergenic | 35.0% | |
TGCAGCATAGACAAATTATG+GGG | - | chr3.3:66674574-66674593 | None:intergenic | 35.0% | |
TGGTTGTATTTCCATATGGT+TGG | + | chr3.3:66675421-66675440 | MS.gene022245:CDS | 35.0% | |
TTGAAGAATGATCTGATCCA+TGG | - | chr3.3:66674542-66674561 | None:intergenic | 35.0% | |
TTTCATCGTTAATTTCGCCA+TGG | + | chr3.3:66674522-66674541 | MS.gene022245:intron | 35.0% | |
! | ATACTTTTCATCATCGCCAA+TGG | - | chr3.3:66672855-66672874 | None:intergenic | 35.0% |
! | ATGGTAGTGAAATTCATCCA+TGG | + | chr3.3:66675292-66675311 | MS.gene022245:CDS | 35.0% |
! | ATTTCGTGAAACTACCGATT+AGG | - | chr3.3:66675038-66675057 | None:intergenic | 35.0% |
! | ATTTTGAATAAGAGGGGATG+GGG | - | chr3.3:66672975-66672994 | None:intergenic | 35.0% |
! | GCAAAACGCATCTTTTCATT+TGG | - | chr3.3:66671930-66671949 | None:intergenic | 35.0% |
! | TAATCCTTTGGAAATGTCTC+TGG | - | chr3.3:66675156-66675175 | None:intergenic | 35.0% |
! | TCATTCCATAATGGAGTGAT+TGG | - | chr3.3:66674910-66674929 | None:intergenic | 35.0% |
! | TGTGAATGCTTTGCTATGTT+TGG | - | chr3.3:66674935-66674954 | None:intergenic | 35.0% |
! | TTGAAACTTTTCGCATCACT+TGG | - | chr3.3:66675372-66675391 | None:intergenic | 35.0% |
!! | AGATTTTAACATAAGAGGGG+AGG | - | chr3.3:66673051-66673070 | None:intergenic | 35.0% |
!! | CTTTGAAATTACATTGGGGT+AGG | - | chr3.3:66674147-66674166 | None:intergenic | 35.0% |
!! | GATTTTAACATAAGAGGGGA+GGG | - | chr3.3:66673050-66673069 | None:intergenic | 35.0% |
!! | GCACCTTAGTGTTTTTATGT+GGG | + | chr3.3:66671718-66671737 | MS.gene022245:intron | 35.0% |
!! | TGCACCTTAGTGTTTTTATG+TGG | + | chr3.3:66671717-66671736 | MS.gene022245:intron | 35.0% |
!!! | AATGGGTGTTATTTTTGCTG+AGG | + | chr3.3:66675521-66675540 | MS.gene022245:CDS | 35.0% |
!!! | AGACAGAGCTTGTTTTGTTA+AGG | - | chr3.3:66674861-66674880 | None:intergenic | 35.0% |
!!! | ATGGGTGTTATTTTTGCTGA+GGG | + | chr3.3:66675522-66675541 | MS.gene022245:CDS | 35.0% |
!!! | CAATCCAGTAGTTTTTTGAG+GGG | - | chr3.3:66674714-66674733 | None:intergenic | 35.0% |
!!! | GATTTTTGGGTTTTGGGATA+TGG | + | chr3.3:66675330-66675349 | MS.gene022245:CDS | 35.0% |
!!! | GCAATCCAGTAGTTTTTTGA+GGG | - | chr3.3:66674715-66674734 | None:intergenic | 35.0% |
!!! | GGACATGATTTTTGGGTTTT+GGG | + | chr3.3:66675324-66675343 | MS.gene022245:CDS | 35.0% |
!!! | GGACATGTATTTTGAAACTG+AGG | - | chr3.3:66672231-66672250 | None:intergenic | 35.0% |
!!! | GGACATGTATTTTGAAATGG+AGG | + | chr3.3:66672457-66672476 | MS.gene022245:intron | 35.0% |
!!! | TGCAATCCAGTAGTTTTTTG+AGG | - | chr3.3:66674716-66674735 | None:intergenic | 35.0% |
!!! | TGGACATGATTTTTGGGTTT+TGG | + | chr3.3:66675323-66675342 | MS.gene022245:CDS | 35.0% |
!!! | TGTTGAGAGCCATTTTTGTA+TGG | + | chr3.3:66670336-66670355 | MS.gene022245:CDS | 35.0% |
AAGACCCCTCAAAAAACTAC+TGG | + | chr3.3:66674707-66674726 | MS.gene022245:CDS | 40.0% | |
AATGGCTCTTTATGCCTCTT+TGG | - | chr3.3:66671258-66671277 | None:intergenic | 40.0% | |
AATGTATACCTGTGGTTCAC+CGG | - | chr3.3:66671379-66671398 | None:intergenic | 40.0% | |
ACCGTGGTTGTATTTCCATA+TGG | + | chr3.3:66675417-66675436 | MS.gene022245:CDS | 40.0% | |
AGGACAATTCAATTGTTCCC+TGG | + | chr3.3:66674099-66674118 | MS.gene022245:CDS | 40.0% | |
ATTATACTTACGGTGCAGCA+TGG | + | chr3.3:66671159-66671178 | MS.gene022245:intron | 40.0% | |
ATTCAAGATTCTCTTAGGGG+AGG | - | chr3.3:66673020-66673039 | None:intergenic | 40.0% | |
ATTCATCCATGGCATTTGCA+TGG | + | chr3.3:66675303-66675322 | MS.gene022245:CDS | 40.0% | |
ATTTCATTGTTCGCACTTCC+CGG | + | chr3.3:66674327-66674346 | MS.gene022245:intron | 40.0% | |
ATTTGACACGTGCACCTTTA+AGG | + | chr3.3:66675391-66675410 | MS.gene022245:CDS | 40.0% | |
CAGAAGGAACTGTTATTCAC+TGG | + | chr3.3:66670555-66670574 | MS.gene022245:CDS | 40.0% | |
CAGAATGCAAACCAGTTACA+TGG | + | chr3.3:66675267-66675286 | MS.gene022245:CDS | 40.0% | |
CATATGGTTGGACTGCATTA+AGG | + | chr3.3:66675433-66675452 | MS.gene022245:CDS | 40.0% | |
CATATGTGAAGTGGTTGACT+TGG | + | chr3.3:66672436-66672455 | MS.gene022245:intron | 40.0% | |
CCAAATACAACTACCGGTAA+CGG | + | chr3.3:66675201-66675220 | MS.gene022245:CDS | 40.0% | |
CTTAATGCAGTCCAACCATA+TGG | - | chr3.3:66675435-66675454 | None:intergenic | 40.0% | |
CTTCACAAATTTAGCTGCCA+GGG | - | chr3.3:66674119-66674138 | None:intergenic | 40.0% | |
GCACCCACATAAAAACACTA+AGG | - | chr3.3:66671724-66671743 | None:intergenic | 40.0% | |
GGGATGTTTGAGCTATCATT+TGG | + | chr3.3:66670371-66670390 | MS.gene022245:CDS | 40.0% | |
TCAAGCATCTTAGAAAGGAG+GGG | - | chr3.3:66672906-66672925 | None:intergenic | 40.0% | |
TCTCAGTGTGCTATAAATCC+AGG | + | chr3.3:66670748-66670767 | MS.gene022245:CDS | 40.0% | |
TCTTCACAAATTTAGCTGCC+AGG | - | chr3.3:66674120-66674139 | None:intergenic | 40.0% | |
TTAAGGATTGTTAGGGCTTG+TGG | - | chr3.3:66674769-66674788 | None:intergenic | 40.0% | |
TTCAAGATTCTCTTAGGGGA+GGG | - | chr3.3:66673019-66673038 | None:intergenic | 40.0% | |
TTGCCAACAACACCTTACTT+AGG | + | chr3.3:66675084-66675103 | MS.gene022245:CDS | 40.0% | |
TTGGACTGCATTAAGGTTCA+AGG | + | chr3.3:66675440-66675459 | MS.gene022245:CDS | 40.0% | |
TTTCAGACACTGCTCATCAA+TGG | + | chr3.3:66674073-66674092 | MS.gene022245:intron | 40.0% | |
! | CAACTTCAGCTCTGATAGTT+GGG | - | chr3.3:66670496-66670515 | None:intergenic | 40.0% |
! | CTTGTTGTAGTAGAAGCAGA+TGG | + | chr3.3:66674604-66674623 | MS.gene022245:CDS | 40.0% |
! | GTCATTAGCTTCTCTCAACA+TGG | + | chr3.3:66674243-66674262 | MS.gene022245:CDS | 40.0% |
! | TGAGAGTGTGATCTTCTACT+TGG | - | chr3.3:66674487-66674506 | None:intergenic | 40.0% |
! | TTCCATAATGGAGTGATTGG+TGG | - | chr3.3:66674907-66674926 | None:intergenic | 40.0% |
! | TTTTGAATAAGAGGGGATGG+GGG | - | chr3.3:66672974-66672993 | None:intergenic | 40.0% |
!! | ATATGAAGAAGTGCCACTAG+AGG | - | chr3.3:66670826-66670845 | None:intergenic | 40.0% |
!! | CGATTAGGTTTTGTGTGTTG+AGG | - | chr3.3:66675023-66675042 | None:intergenic | 40.0% |
!! | CTGAGGGTGTTCACAAAATT+AGG | + | chr3.3:66675538-66675557 | MS.gene022245:CDS | 40.0% |
!! | GATCCTAAGTAAGGTGTTGT+TGG | - | chr3.3:66675090-66675109 | None:intergenic | 40.0% |
!! | TGGATTGCAATTGGTGTTAG+AGG | + | chr3.3:66674727-66674746 | MS.gene022245:CDS | 40.0% |
!!! | AGTAGTTTTTTGAGGGGTCT+TGG | - | chr3.3:66674708-66674727 | None:intergenic | 40.0% |
!!! | GCACCTTAGTGTTTTTAGGT+GGG | - | chr3.3:66671530-66671549 | None:intergenic | 40.0% |
!!! | TGCACCTTAGTGTTTTTAGG+TGG | - | chr3.3:66671531-66671550 | None:intergenic | 40.0% |
ACAACCACGGTGTTCCTTAA+AGG | - | chr3.3:66675408-66675427 | None:intergenic | 45.0% | |
ACCACCAGAGACATTTCCAA+AGG | + | chr3.3:66675149-66675168 | MS.gene022245:CDS | 45.0% | |
ACCAGATTGCTTAGAGCATG+TGG | + | chr3.3:66670442-66670461 | MS.gene022245:CDS | 45.0% | |
AGAAAACCAAACACGCCACA+AGG | + | chr3.3:66674826-66674845 | MS.gene022245:CDS | 45.0% | |
AGGCAGATAATCCTGGTGTT+TGG | + | chr3.3:66675460-66675479 | MS.gene022245:CDS | 45.0% | |
AGGTTCAAGGCAGATAATCC+TGG | + | chr3.3:66675453-66675472 | MS.gene022245:CDS | 45.0% | |
ATCTCATTGGAGCTGAAGAG+AGG | - | chr3.3:66671353-66671372 | None:intergenic | 45.0% | |
ATCTGCTCCTCAGTGATCTA+TGG | + | chr3.3:66671298-66671317 | MS.gene022245:CDS | 45.0% | |
ATGGTATGCAAAGAGCAGCA+GGG | + | chr3.3:66671205-66671224 | MS.gene022245:CDS | 45.0% | |
CACCACCAATCACTCCATTA+TGG | + | chr3.3:66674902-66674921 | MS.gene022245:CDS | 45.0% | |
CACTACCATTCCCATGTAAC+TGG | - | chr3.3:66675281-66675300 | None:intergenic | 45.0% | |
CCAACTATCAGAGCTGAAGT+TGG | + | chr3.3:66670494-66670513 | MS.gene022245:CDS | 45.0% | |
CCACAAGTAAGAGCTTCTGT+AGG | - | chr3.3:66675570-66675589 | None:intergenic | 45.0% | |
CCGTTACCGGTAGTTGTATT+TGG | - | chr3.3:66675204-66675223 | None:intergenic | 45.0% | |
CCTACAGAAGCTCTTACTTG+TGG | + | chr3.3:66675567-66675586 | MS.gene022245:CDS | 45.0% | |
GAAATTACATTGGGGTAGGG+TGG | - | chr3.3:66674143-66674162 | None:intergenic | 45.0% | |
GCAAACCAGTTACATGGGAA+TGG | + | chr3.3:66675273-66675292 | MS.gene022245:CDS | 45.0% | |
GCACCCACCTAAAAACACTA+AGG | + | chr3.3:66671524-66671543 | MS.gene022245:intron | 45.0% | |
GGAACTGTTATTCACTGGCA+TGG | + | chr3.3:66670560-66670579 | MS.gene022245:CDS | 45.0% | |
GGAATCAATGGTCAGTTTCC+TGG | + | chr3.3:66670470-66670489 | MS.gene022245:CDS | 45.0% | |
GGCAGATAATCCTGGTGTTT+GGG | + | chr3.3:66675461-66675480 | MS.gene022245:CDS | 45.0% | |
GTTAAACCTTGTGGCGTGTT+TGG | - | chr3.3:66674835-66674854 | None:intergenic | 45.0% | |
TATGGTATGCAAAGAGCAGC+AGG | + | chr3.3:66671204-66671223 | MS.gene022245:CDS | 45.0% | |
TCAAGATTCTCTTAGGGGAG+GGG | - | chr3.3:66673018-66673037 | None:intergenic | 45.0% | |
TCATGTCCATGCAAATGCCA+TGG | - | chr3.3:66675312-66675331 | None:intergenic | 45.0% | |
TCTCTTCAGCTCCAATGAGA+TGG | + | chr3.3:66671352-66671371 | MS.gene022245:CDS | 45.0% | |
TGCTTAGAGCATGTGGTGAT+GGG | + | chr3.3:66670449-66670468 | MS.gene022245:CDS | 45.0% | |
TGTTGAGGAGAAGAATCCTG+CGG | - | chr3.3:66675008-66675027 | None:intergenic | 45.0% | |
TTGCTTAGAGCATGTGGTGA+TGG | + | chr3.3:66670448-66670467 | MS.gene022245:CDS | 45.0% | |
TTGTGTGCCATAGATCACTG+AGG | - | chr3.3:66671308-66671327 | None:intergenic | 45.0% | |
TTTGAATAAGAGGGGATGGG+GGG | - | chr3.3:66672973-66672992 | None:intergenic | 45.0% | |
TTTGGAAATGTCTCTGGTGG+TGG | - | chr3.3:66675150-66675169 | None:intergenic | 45.0% | |
! | AAGGGGAGTGTATCAAGGAA+AGG | + | chr3.3:66673570-66673589 | MS.gene022245:intron | 45.0% |
! | ACCACATGCTCTAAGCAATC+TGG | - | chr3.3:66670446-66670465 | None:intergenic | 45.0% |
! | AGGGGAGTGTATCAAGGAAA+GGG | + | chr3.3:66673571-66673590 | MS.gene022245:intron | 45.0% |
! | ATCCTGCGGTGTGAGAATTT+TGG | - | chr3.3:66674994-66675013 | None:intergenic | 45.0% |
! | CAATGTCATCGACTGCGAAT+GGG | - | chr3.3:66674642-66674661 | None:intergenic | 45.0% |
! | CATAATGGAGTGATTGGTGG+TGG | - | chr3.3:66674904-66674923 | None:intergenic | 45.0% |
! | CCAACTTCAGCTCTGATAGT+TGG | - | chr3.3:66670497-66670516 | None:intergenic | 45.0% |
! | GTTAGGGCTTGTGGTGTTTT+TGG | - | chr3.3:66674760-66674779 | None:intergenic | 45.0% |
! | TCAATGTCATCGACTGCGAA+TGG | - | chr3.3:66674643-66674662 | None:intergenic | 45.0% |
! | TCCTTTGGAAATGTCTCTGG+TGG | - | chr3.3:66675153-66675172 | None:intergenic | 45.0% |
!! | CATGTGGTGATGGGAATCAA+TGG | + | chr3.3:66670458-66670477 | MS.gene022245:CDS | 45.0% |
!! | GGTGTCGTTTAGGAACATCT+TGG | - | chr3.3:66675601-66675620 | None:intergenic | 45.0% |
!! | TCTGACTCAATCGGTGTTAG+AGG | + | chr3.3:66674802-66674821 | MS.gene022245:CDS | 45.0% |
!! | TGATTGGTGGTGGTGAGTTT+GGG | - | chr3.3:66674894-66674913 | None:intergenic | 45.0% |
!! | TGTGAGAATTTTGGTGGCTG+TGG | - | chr3.3:66674985-66675004 | None:intergenic | 45.0% |
!!! | GGGTTTTGGGATATGGAGAA+GGG | + | chr3.3:66675337-66675356 | MS.gene022245:CDS | 45.0% |
!!! | TGGGTTTTGGGATATGGAGA+AGG | + | chr3.3:66675336-66675355 | MS.gene022245:CDS | 45.0% |
!! | AGTTATTAAAAAAAAAAAAA+AGG | + | chr3.3:66674421-66674440 | MS.gene022245:intron | 5.0% |
!! | ATATATATATATATATATAG+GGG | - | chr3.3:66671839-66671820 | None:intergenic | 5.0% |
!! | TAAAACATATTTAATTATTA+AGG | + | chr3.3:66673487-66673506 | MS.gene022245:intron | 5.0% |
!!! | ACATATTTTAATTTTATTTT+GGG | - | chr3.3:66673267-66673286 | None:intergenic | 5.0% |
!!! | TACATATTTTAATTTTATTT+TGG | - | chr3.3:66673268-66673287 | None:intergenic | 5.0% |
AAGATTCTCTTAGGGGAGGG+GGG | - | chr3.3:66673016-66673035 | None:intergenic | 50.0% | |
ACACTGCTCATCAATGGACG+AGG | + | chr3.3:66674079-66674098 | MS.gene022245:CDS | 50.0% | |
AGCTCACGTGAACAAGAGGT+TGG | + | chr3.3:66671327-66671346 | MS.gene022245:CDS | 50.0% | |
CAAAGAGCAGCAGGGTTGTA+TGG | + | chr3.3:66671213-66671232 | MS.gene022245:CDS | 50.0% | |
CAAGATTCTCTTAGGGGAGG+GGG | - | chr3.3:66673017-66673036 | None:intergenic | 50.0% | |
CAATGAAACGCCCAAACACC+AGG | - | chr3.3:66675474-66675493 | None:intergenic | 50.0% | |
CACAAGCTCACGTGAACAAG+AGG | + | chr3.3:66671323-66671342 | MS.gene022245:CDS | 50.0% | |
CACCAAAATTCTCACACCGC+AGG | + | chr3.3:66674989-66675008 | MS.gene022245:CDS | 50.0% | |
TCACTGGCATGGAATCAGAC+AGG | + | chr3.3:66670571-66670590 | MS.gene022245:CDS | 50.0% | |
TCAGCTCCAATGAGATGGAC+CGG | + | chr3.3:66671357-66671376 | MS.gene022245:CDS | 50.0% | |
TTGAATAAGAGGGGATGGGG+GGG | - | chr3.3:66672972-66672991 | None:intergenic | 50.0% | |
TTTGCAGCGTGGAACTCCTT+GGG | + | chr3.3:66670705-66670724 | MS.gene022245:intron | 50.0% | |
! | CAAGGAAGGGGAGTGTATCA+AGG | + | chr3.3:66673565-66673584 | MS.gene022245:intron | 50.0% |
! | CTGCGGTGTGAGAATTTTGG+TGG | - | chr3.3:66674991-66675010 | None:intergenic | 50.0% |
! | TGCACCTTTAAGGAACACCG+TGG | + | chr3.3:66675401-66675420 | MS.gene022245:CDS | 50.0% |
! | TGGCTGTGGAGTTCCCATTT+TGG | - | chr3.3:66674971-66674990 | None:intergenic | 50.0% |
!! | GTGATTGGTGGTGGTGAGTT+TGG | - | chr3.3:66674895-66674914 | None:intergenic | 50.0% |
!! | TGAAGAAGTGCCACTAGAGG+AGG | - | chr3.3:66670823-66670842 | None:intergenic | 50.0% |
GGTTCACCGGTCCATCTCAT+TGG | - | chr3.3:66671366-66671385 | None:intergenic | 55.0% | |
GTTTGCAGCGTGGAACTCCT+TGG | + | chr3.3:66670704-66670723 | MS.gene022245:intron | 55.0% | |
TGAATAAGAGGGGATGGGGG+GGG | - | chr3.3:66672971-66672990 | None:intergenic | 55.0% | |
! | TCAGCTCTGATAGTTGGGCC+AGG | - | chr3.3:66670491-66670510 | None:intergenic | 55.0% |
AATAAGAGGGGATGGGGGGG+GGG | - | chr3.3:66672969-66672988 | None:intergenic | 60.0% | |
CGTGGAACTCCTTGGGCTGA+TGG | + | chr3.3:66670712-66670731 | MS.gene022245:CDS | 60.0% | |
GAATAAGAGGGGATGGGGGG+GGG | - | chr3.3:66672970-66672989 | None:intergenic | 60.0% | |
GAGATGGACCGGTGAACCAC+AGG | + | chr3.3:66671368-66671387 | MS.gene022245:CDS | 60.0% | |
GCAGCAGTTCCATCAGCCCA+AGG | - | chr3.3:66670724-66670743 | None:intergenic | 60.0% | |
ATAAGAGGGGATGGGGGGGG+GGG | - | chr3.3:66672968-66672987 | None:intergenic | 65.0% | |
TAAGAGGGGATGGGGGGGGG+GGG | - | chr3.3:66672967-66672986 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.3 | gene | 66670329 | 66675629 | 66670329 | ID=MS.gene022245 |
chr3.3 | mRNA | 66670329 | 66675629 | 66670329 | ID=MS.gene022245.t1;Parent=MS.gene022245 |
chr3.3 | exon | 66670329 | 66670592 | 66670329 | ID=MS.gene022245.t1.exon1;Parent=MS.gene022245.t1 |
chr3.3 | CDS | 66670329 | 66670592 | 66670329 | ID=cds.MS.gene022245.t1;Parent=MS.gene022245.t1 |
chr3.3 | exon | 66670712 | 66670804 | 66670712 | ID=MS.gene022245.t1.exon2;Parent=MS.gene022245.t1 |
chr3.3 | CDS | 66670712 | 66670804 | 66670712 | ID=cds.MS.gene022245.t1;Parent=MS.gene022245.t1 |
chr3.3 | exon | 66671177 | 66671389 | 66671177 | ID=MS.gene022245.t1.exon3;Parent=MS.gene022245.t1 |
chr3.3 | CDS | 66671177 | 66671389 | 66671177 | ID=cds.MS.gene022245.t1;Parent=MS.gene022245.t1 |
chr3.3 | exon | 66674079 | 66674273 | 66674079 | ID=MS.gene022245.t1.exon4;Parent=MS.gene022245.t1 |
chr3.3 | CDS | 66674079 | 66674273 | 66674079 | ID=cds.MS.gene022245.t1;Parent=MS.gene022245.t1 |
chr3.3 | exon | 66674595 | 66675629 | 66674595 | ID=MS.gene022245.t1.exon5;Parent=MS.gene022245.t1 |
chr3.3 | CDS | 66674595 | 66675629 | 66674595 | ID=cds.MS.gene022245.t1;Parent=MS.gene022245.t1 |
Gene Sequence |
Protein sequence |