Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30569.t1 | XP_003606701.1 | 94.7 | 488 | 18 | 2 | 1 | 482 | 64 | 549 | 1.10E-272 | 948.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30569.t1 | O81081 | 70.1 | 491 | 135 | 6 | 1 | 482 | 50 | 537 | 3.6e-211 | 735.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30569.t1 | G7JUW8 | 94.7 | 488 | 18 | 2 | 1 | 482 | 64 | 549 | 8.1e-273 | 948.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene30569 | MS.gene022246 | PPI |
MS.gene022247 | MS.gene30569 | PPI |
MS.gene25899 | MS.gene30569 | PPI |
MS.gene70576 | MS.gene30569 | PPI |
MS.gene30569 | MS.gene074403 | PPI |
MS.gene30569 | MS.gene022245 | PPI |
MS.gene25898 | MS.gene30569 | PPI |
MS.gene074404 | MS.gene30569 | PPI |
MS.gene30569 | MS.gene25900 | PPI |
MS.gene30569 | MS.gene70575 | PPI |
MS.gene70574 | MS.gene30569 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30569.t1 | MTR_4g064530 | 94.479 | 489 | 19 | 2 | 1 | 483 | 64 | 550 | 0.0 | 931 |
MS.gene30569.t1 | MTR_4g064530 | 94.672 | 488 | 18 | 2 | 1 | 482 | 64 | 549 | 0.0 | 929 |
MS.gene30569.t1 | MTR_7g060460 | 72.871 | 505 | 116 | 6 | 1 | 489 | 53 | 552 | 0.0 | 751 |
MS.gene30569.t1 | MTR_7g058690 | 72.289 | 498 | 118 | 5 | 1 | 483 | 53 | 545 | 0.0 | 736 |
MS.gene30569.t1 | MTR_7g062250 | 68.533 | 518 | 150 | 4 | 1 | 508 | 54 | 568 | 0.0 | 734 |
MS.gene30569.t1 | MTR_7g458880 | 70.482 | 498 | 127 | 5 | 1 | 483 | 53 | 545 | 0.0 | 731 |
MS.gene30569.t1 | MTR_7g062310 | 61.303 | 522 | 183 | 5 | 1 | 508 | 67 | 583 | 0.0 | 648 |
MS.gene30569.t1 | MTR_3g462760 | 53.061 | 490 | 209 | 5 | 1 | 483 | 46 | 521 | 1.29e-180 | 520 |
MS.gene30569.t1 | MTR_4g015120 | 52.846 | 492 | 210 | 6 | 1 | 483 | 44 | 522 | 1.29e-180 | 520 |
MS.gene30569.t1 | MTR_5g069680 | 53.360 | 491 | 207 | 7 | 1 | 483 | 47 | 523 | 5.55e-180 | 518 |
MS.gene30569.t1 | MTR_5g020600 | 50.690 | 507 | 229 | 6 | 1 | 499 | 54 | 547 | 1.06e-179 | 518 |
MS.gene30569.t1 | MTR_5g020620 | 50.690 | 507 | 228 | 7 | 1 | 499 | 50 | 542 | 8.03e-178 | 513 |
MS.gene30569.t1 | MTR_5g083360 | 52.113 | 497 | 214 | 10 | 2 | 483 | 45 | 532 | 1.57e-177 | 512 |
MS.gene30569.t1 | MTR_3g071890 | 52.546 | 491 | 197 | 11 | 2 | 474 | 54 | 526 | 2.78e-172 | 499 |
MS.gene30569.t1 | MTR_5g081810 | 50.713 | 491 | 217 | 7 | 2 | 483 | 20 | 494 | 5.09e-171 | 494 |
MS.gene30569.t1 | MTR_5g073210 | 50.605 | 496 | 217 | 11 | 1 | 483 | 45 | 525 | 3.01e-158 | 462 |
MS.gene30569.t1 | MTR_2g008330 | 43.813 | 493 | 261 | 7 | 1 | 483 | 58 | 544 | 7.91e-144 | 426 |
MS.gene30569.t1 | MTR_7g065970 | 46.215 | 502 | 240 | 12 | 1 | 483 | 45 | 535 | 2.08e-142 | 422 |
MS.gene30569.t1 | MTR_8g027375 | 45.400 | 500 | 239 | 11 | 1 | 483 | 54 | 536 | 2.61e-142 | 422 |
MS.gene30569.t1 | MTR_7g065980 | 44.088 | 499 | 256 | 9 | 1 | 483 | 45 | 536 | 7.08e-141 | 419 |
MS.gene30569.t1 | MTR_4g019225 | 44.024 | 502 | 252 | 8 | 1 | 483 | 46 | 537 | 1.47e-137 | 410 |
MS.gene30569.t1 | MTR_3g101635 | 45.253 | 495 | 249 | 9 | 1 | 483 | 47 | 531 | 2.68e-136 | 407 |
MS.gene30569.t1 | MTR_3g101640 | 44.668 | 497 | 251 | 12 | 1 | 483 | 50 | 536 | 9.95e-135 | 403 |
MS.gene30569.t1 | MTR_5g081790 | 42.238 | 277 | 143 | 6 | 200 | 475 | 159 | 419 | 2.87e-61 | 208 |
MS.gene30569.t1 | MTR_5g081790 | 55.385 | 130 | 51 | 1 | 2 | 124 | 45 | 174 | 5.78e-46 | 167 |
MS.gene30569.t1 | MTR_8g091390 | 30.192 | 520 | 290 | 20 | 1 | 483 | 54 | 537 | 2.52e-53 | 190 |
MS.gene30569.t1 | MTR_3g078700 | 30.495 | 505 | 284 | 17 | 1 | 483 | 46 | 505 | 4.25e-50 | 181 |
MS.gene30569.t1 | MTR_3g078740 | 30.354 | 537 | 292 | 21 | 1 | 483 | 46 | 554 | 4.55e-48 | 176 |
MS.gene30569.t1 | MTR_3g078730 | 29.901 | 505 | 287 | 19 | 1 | 483 | 45 | 504 | 5.46e-46 | 169 |
MS.gene30569.t1 | MTR_4g101650 | 28.711 | 512 | 296 | 16 | 1 | 485 | 47 | 516 | 2.39e-44 | 166 |
MS.gene30569.t1 | MTR_3g008580 | 27.451 | 510 | 305 | 15 | 1 | 485 | 49 | 518 | 4.54e-43 | 162 |
MS.gene30569.t1 | MTR_7g058670 | 74.074 | 81 | 20 | 1 | 38 | 117 | 13 | 93 | 1.52e-39 | 139 |
MS.gene30569.t1 | MTR_1g090707 | 28.431 | 510 | 290 | 20 | 1 | 485 | 44 | 503 | 8.58e-37 | 144 |
MS.gene30569.t1 | MTR_7g051440 | 27.052 | 536 | 312 | 20 | 1 | 506 | 49 | 535 | 4.35e-34 | 136 |
MS.gene30569.t1 | MTR_8g073840 | 43.791 | 153 | 47 | 4 | 1 | 152 | 50 | 164 | 6.55e-32 | 125 |
MS.gene30569.t1 | MTR_1g026410 | 26.033 | 484 | 320 | 14 | 2 | 483 | 50 | 497 | 1.99e-31 | 128 |
MS.gene30569.t1 | MTR_3g115050 | 24.950 | 505 | 299 | 15 | 2 | 483 | 51 | 498 | 6.21e-30 | 124 |
MS.gene30569.t1 | MTR_4g049390 | 25.299 | 502 | 309 | 15 | 2 | 487 | 48 | 499 | 1.58e-28 | 119 |
MS.gene30569.t1 | MTR_4g075690 | 25.103 | 486 | 303 | 15 | 2 | 474 | 51 | 488 | 2.58e-28 | 119 |
MS.gene30569.t1 | MTR_5g018270 | 26.441 | 503 | 321 | 16 | 1 | 501 | 51 | 506 | 4.62e-27 | 115 |
MS.gene30569.t1 | MTR_8g479380 | 24.896 | 482 | 321 | 16 | 2 | 480 | 50 | 493 | 1.23e-25 | 110 |
MS.gene30569.t1 | MTR_2g088080 | 24.699 | 498 | 309 | 15 | 2 | 483 | 51 | 498 | 2.13e-25 | 110 |
MS.gene30569.t1 | MTR_3g083450 | 25.806 | 496 | 313 | 16 | 2 | 483 | 47 | 501 | 3.03e-25 | 109 |
MS.gene30569.t1 | MTR_4g048350 | 25.251 | 499 | 304 | 18 | 2 | 483 | 48 | 494 | 3.83e-25 | 109 |
MS.gene30569.t1 | MTR_4g083210 | 25.355 | 493 | 315 | 14 | 2 | 483 | 46 | 496 | 5.11e-25 | 108 |
MS.gene30569.t1 | MTR_4g075690 | 30.290 | 241 | 161 | 6 | 2 | 241 | 51 | 285 | 5.77e-25 | 108 |
MS.gene30569.t1 | MTR_3g083430 | 25.251 | 499 | 312 | 19 | 2 | 483 | 46 | 500 | 5.98e-25 | 108 |
MS.gene30569.t1 | MTR_3g083390 | 25.299 | 502 | 308 | 17 | 2 | 483 | 46 | 500 | 2.43e-24 | 107 |
MS.gene30569.t1 | MTR_3g083400 | 25.100 | 502 | 309 | 17 | 2 | 483 | 46 | 500 | 3.83e-24 | 106 |
MS.gene30569.t1 | MTR_3g083440 | 25.100 | 502 | 309 | 17 | 2 | 483 | 46 | 500 | 5.17e-24 | 106 |
MS.gene30569.t1 | MTR_8g479390 | 24.419 | 516 | 318 | 17 | 1 | 501 | 51 | 509 | 1.19e-23 | 105 |
MS.gene30569.t1 | MTR_4g132320 | 25.051 | 491 | 316 | 16 | 2 | 483 | 52 | 499 | 1.68e-23 | 104 |
MS.gene30569.t1 | MTR_3g083410 | 24.701 | 502 | 311 | 17 | 2 | 483 | 10 | 464 | 4.62e-23 | 102 |
MS.gene30569.t1 | MTR_4g083190 | 25.911 | 494 | 317 | 17 | 1 | 483 | 47 | 502 | 1.11e-20 | 95.9 |
MS.gene30569.t1 | MTR_2g088080 | 23.667 | 469 | 292 | 15 | 35 | 487 | 3 | 421 | 1.88e-17 | 85.5 |
MS.gene30569.t1 | MTR_2g436410 | 56.338 | 71 | 27 | 2 | 319 | 388 | 5 | 72 | 1.78e-15 | 73.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30569.t1 | AT2G29130 | 69.919 | 492 | 136 | 6 | 1 | 483 | 50 | 538 | 0.0 | 721 |
MS.gene30569.t1 | AT5G60020 | 68.725 | 502 | 134 | 6 | 1 | 483 | 45 | 542 | 0.0 | 716 |
MS.gene30569.t1 | AT5G60020 | 68.725 | 502 | 134 | 6 | 1 | 483 | 13 | 510 | 0.0 | 715 |
MS.gene30569.t1 | AT5G60020 | 69.433 | 494 | 128 | 6 | 1 | 475 | 45 | 534 | 0.0 | 714 |
MS.gene30569.t1 | AT2G38080 | 51.587 | 504 | 226 | 5 | 2 | 499 | 48 | 539 | 6.20e-180 | 518 |
MS.gene30569.t1 | AT5G03260 | 52.846 | 492 | 208 | 9 | 1 | 483 | 46 | 522 | 3.18e-176 | 508 |
MS.gene30569.t1 | AT5G58910 | 50.913 | 493 | 222 | 6 | 1 | 483 | 49 | 531 | 3.60e-176 | 508 |
MS.gene30569.t1 | AT5G58910 | 50.913 | 493 | 222 | 6 | 1 | 483 | 50 | 532 | 4.06e-176 | 508 |
MS.gene30569.t1 | AT5G05390 | 54.032 | 496 | 201 | 10 | 2 | 483 | 48 | 530 | 1.72e-175 | 507 |
MS.gene30569.t1 | AT2G40370 | 51.683 | 505 | 212 | 10 | 2 | 483 | 50 | 545 | 9.90e-175 | 505 |
MS.gene30569.t1 | AT2G30210 | 51.210 | 496 | 219 | 9 | 2 | 483 | 49 | 535 | 2.30e-169 | 491 |
MS.gene30569.t1 | AT5G58910 | 49.696 | 493 | 221 | 7 | 1 | 483 | 13 | 488 | 3.91e-168 | 486 |
MS.gene30569.t1 | AT5G01190 | 50.296 | 507 | 232 | 6 | 1 | 499 | 45 | 539 | 3.91e-168 | 488 |
MS.gene30569.t1 | AT5G01190 | 50.296 | 507 | 232 | 6 | 1 | 499 | 31 | 525 | 5.62e-168 | 487 |
MS.gene30569.t1 | AT1G18140 | 47.431 | 506 | 235 | 11 | 1 | 483 | 49 | 546 | 3.47e-159 | 466 |
MS.gene30569.t1 | AT5G07130 | 49.299 | 499 | 227 | 12 | 2 | 483 | 45 | 534 | 3.96e-154 | 452 |
MS.gene30569.t1 | AT3G09220 | 45.892 | 499 | 242 | 8 | 1 | 483 | 46 | 532 | 1.67e-147 | 436 |
MS.gene30569.t1 | AT2G46570 | 43.426 | 502 | 246 | 11 | 1 | 483 | 52 | 534 | 1.83e-140 | 417 |
MS.gene30569.t1 | AT5G09360 | 44.040 | 495 | 249 | 11 | 1 | 483 | 56 | 534 | 2.37e-140 | 417 |
MS.gene30569.t1 | AT5G07130 | 48.472 | 458 | 210 | 12 | 43 | 483 | 1 | 449 | 9.72e-134 | 397 |
MS.gene30569.t1 | AT5G07130 | 48.472 | 458 | 210 | 12 | 43 | 483 | 1 | 449 | 9.72e-134 | 397 |
MS.gene30569.t1 | AT5G48100 | 43.373 | 498 | 256 | 11 | 1 | 483 | 42 | 528 | 4.33e-132 | 396 |
MS.gene30569.t1 | AT5G01050 | 42.771 | 498 | 252 | 11 | 4 | 483 | 51 | 533 | 2.44e-129 | 389 |
MS.gene30569.t1 | AT5G01040 | 42.455 | 497 | 251 | 11 | 5 | 483 | 52 | 531 | 1.35e-126 | 382 |
MS.gene30569.t1 | AT2G46570 | 42.308 | 468 | 232 | 11 | 35 | 483 | 1 | 449 | 1.52e-123 | 371 |
MS.gene30569.t1 | AT3G09220 | 45.291 | 446 | 216 | 8 | 54 | 483 | 2 | 435 | 1.58e-123 | 370 |
MS.gene30569.t1 | AT4G39830 | 30.377 | 530 | 284 | 17 | 1 | 483 | 56 | 547 | 5.59e-59 | 206 |
MS.gene30569.t1 | AT5G21100 | 30.577 | 520 | 289 | 18 | 1 | 483 | 44 | 528 | 3.74e-57 | 200 |
MS.gene30569.t1 | AT5G21105 | 31.801 | 522 | 283 | 20 | 1 | 483 | 58 | 545 | 7.11e-56 | 197 |
MS.gene30569.t1 | AT5G21105 | 31.907 | 514 | 277 | 20 | 1 | 475 | 58 | 537 | 3.24e-55 | 194 |
MS.gene30569.t1 | AT4G12420 | 27.539 | 512 | 302 | 14 | 1 | 485 | 45 | 514 | 1.12e-43 | 164 |
MS.gene30569.t1 | AT4G12420 | 27.539 | 512 | 302 | 14 | 1 | 485 | 45 | 514 | 1.12e-43 | 164 |
MS.gene30569.t1 | AT4G39830 | 29.098 | 488 | 262 | 16 | 42 | 483 | 3 | 452 | 5.55e-43 | 160 |
MS.gene30569.t1 | AT4G39830 | 29.193 | 483 | 258 | 16 | 47 | 483 | 6 | 450 | 2.03e-42 | 158 |
MS.gene30569.t1 | AT1G75790 | 28.376 | 511 | 317 | 16 | 1 | 496 | 47 | 523 | 1.35e-41 | 157 |
MS.gene30569.t1 | AT5G51480 | 27.202 | 511 | 305 | 14 | 1 | 485 | 48 | 517 | 8.03e-41 | 155 |
MS.gene30569.t1 | AT4G25240 | 26.953 | 512 | 304 | 14 | 1 | 485 | 49 | 517 | 2.05e-39 | 152 |
MS.gene30569.t1 | AT4G25240 | 26.953 | 512 | 304 | 14 | 1 | 485 | 49 | 517 | 2.05e-39 | 152 |
MS.gene30569.t1 | AT4G39830 | 28.131 | 487 | 255 | 15 | 42 | 483 | 3 | 439 | 3.99e-38 | 146 |
MS.gene30569.t1 | AT1G21850 | 26.157 | 497 | 301 | 16 | 2 | 483 | 50 | 495 | 1.92e-35 | 140 |
MS.gene30569.t1 | AT1G21860 | 26.273 | 491 | 308 | 14 | 2 | 483 | 50 | 495 | 9.49e-35 | 137 |
MS.gene30569.t1 | AT5G48450 | 27.328 | 494 | 316 | 17 | 1 | 485 | 49 | 508 | 4.18e-33 | 133 |
MS.gene30569.t1 | AT5G48450 | 27.328 | 494 | 316 | 17 | 1 | 485 | 49 | 508 | 5.72e-33 | 133 |
MS.gene30569.t1 | AT5G21105 | 32.024 | 331 | 188 | 12 | 161 | 483 | 53 | 354 | 1.90e-29 | 120 |
MS.gene30569.t1 | AT1G76160 | 25.455 | 495 | 308 | 15 | 2 | 483 | 49 | 495 | 4.84e-29 | 121 |
MS.gene30569.t1 | AT4G22010 | 25.996 | 527 | 304 | 21 | 2 | 495 | 47 | 520 | 3.79e-28 | 118 |
MS.gene30569.t1 | AT1G41830 | 24.606 | 508 | 333 | 15 | 2 | 495 | 50 | 521 | 5.63e-28 | 118 |
MS.gene30569.t1 | AT5G66920 | 25.000 | 484 | 307 | 15 | 1 | 474 | 57 | 494 | 1.86e-27 | 116 |
MS.gene30569.t1 | AT4G37160 | 24.074 | 486 | 329 | 14 | 1 | 483 | 51 | 499 | 4.39e-24 | 106 |
MS.gene30569.t1 | AT4G38420 | 23.232 | 495 | 326 | 14 | 2 | 483 | 51 | 504 | 6.15e-24 | 105 |
MS.gene30569.t1 | AT3G13390 | 25.143 | 525 | 336 | 16 | 1 | 511 | 48 | 529 | 9.21e-24 | 105 |
MS.gene30569.t1 | AT4G28090 | 23.899 | 477 | 324 | 14 | 2 | 474 | 49 | 490 | 1.03e-23 | 105 |
MS.gene30569.t1 | AT2G23630 | 25.207 | 484 | 325 | 14 | 1 | 483 | 50 | 497 | 1.71e-22 | 101 |
MS.gene30569.t1 | AT2G23630 | 25.207 | 484 | 325 | 14 | 1 | 483 | 55 | 502 | 1.79e-22 | 101 |
MS.gene30569.t1 | AT1G55560 | 29.818 | 275 | 172 | 8 | 1 | 266 | 46 | 308 | 2.82e-22 | 100 |
MS.gene30569.t1 | AT3G13400 | 25.098 | 510 | 330 | 16 | 1 | 501 | 47 | 513 | 5.02e-22 | 100 |
MS.gene30569.t1 | AT3G13400 | 25.098 | 510 | 330 | 16 | 1 | 501 | 47 | 513 | 5.02e-22 | 100 |
MS.gene30569.t1 | AT4G38420 | 23.093 | 472 | 309 | 14 | 2 | 460 | 51 | 481 | 1.14e-21 | 98.6 |
MS.gene30569.t1 | AT1G55570 | 25.103 | 486 | 314 | 16 | 1 | 474 | 49 | 496 | 1.60e-21 | 98.6 |
MS.gene30569.t1 | AT4G38420 | 26.908 | 249 | 177 | 4 | 2 | 249 | 51 | 295 | 2.01e-20 | 94.4 |
MS.gene30569.t1 | AT4G37160 | 28.099 | 242 | 164 | 5 | 1 | 239 | 51 | 285 | 1.01e-19 | 92.4 |
Find 123 sgRNAs with CRISPR-Local
Find 283 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCCATTACAAAACAGTTTA+AGG | 0.094769 | 4.2:+40615288 | MS.gene30569:CDS |
GGCACATTTGCAGGGTATTT+TGG | 0.173773 | 4.2:-40612519 | None:intergenic |
TCTGATGCCTACACCATTAA+TGG | 0.176037 | 4.2:+40611497 | MS.gene30569:CDS |
ATTGCAGGATACAAGCATTT+TGG | 0.187461 | 4.2:+40612857 | MS.gene30569:CDS |
TTTGAATTTGAACTATTATT+TGG | 0.212461 | 4.2:-40612621 | None:intergenic |
CTTCTCCAACAACATTTCTT+TGG | 0.228697 | 4.2:+40612693 | MS.gene30569:CDS |
CATTTCTTTGGAACTAATAA+TGG | 0.256030 | 4.2:+40612705 | MS.gene30569:CDS |
TTTGTTGTTGGTCAAGGTTT+TGG | 0.271917 | 4.2:+40612921 | MS.gene30569:CDS |
TAACTCTGACCTGTTTGAAT+TGG | 0.297459 | 4.2:-40611045 | None:intergenic |
AATACTGTTGCTGTGCCTTC+TGG | 0.309543 | 4.2:+40613002 | MS.gene30569:CDS |
AATGTGGCATTTGGGTAATT+TGG | 0.312994 | 4.2:-40612303 | None:intergenic |
ACGAGAAGGGGACAGATTAT+TGG | 0.313664 | 4.2:+40610620 | MS.gene30569:CDS |
CAATGCAGGCTGATATTGTT+TGG | 0.314456 | 4.2:-40610663 | None:intergenic |
TGCTGTGCCTTCTGGTGGTT+GGG | 0.319801 | 4.2:+40613010 | MS.gene30569:CDS |
TCAACAAGATTAAACTTTGC+AGG | 0.331305 | 4.2:-40612966 | None:intergenic |
CTGGTGGTTGGGTTGCTATA+CGG | 0.332204 | 4.2:+40613021 | MS.gene30569:CDS |
AGTCATCCTTTGCATCTTCA+TGG | 0.334535 | 4.2:+40612888 | MS.gene30569:CDS |
AAGGAAGTCCCCATTCTCTT+TGG | 0.338186 | 4.2:+40611207 | MS.gene30569:CDS |
ACCTGAACTCTAGTGTTATA+TGG | 0.345887 | 4.2:-40612831 | None:intergenic |
GCTTGTGCAATTACAGCTTC+AGG | 0.346802 | 4.2:-40611446 | None:intergenic |
TGGTTAAGAGCTACTGTCTA+TGG | 0.350969 | 4.2:+40611129 | MS.gene30569:CDS |
TTACTAACCAAAGTATTGTT+TGG | 0.352391 | 4.2:-40612786 | None:intergenic |
GGATTTAATTTCTTTGTTGT+TGG | 0.356145 | 4.2:+40612909 | MS.gene30569:CDS |
CTGATGCCTACACCATTAAT+GGG | 0.371595 | 4.2:+40611498 | MS.gene30569:CDS |
TATTTGGTCCTTGACAAGTT+TGG | 0.374143 | 4.2:-40612605 | None:intergenic |
TTGCTGTGCCTTCTGGTGGT+TGG | 0.376214 | 4.2:+40613009 | MS.gene30569:CDS |
AACTCTGACCTGTTTGAATT+GGG | 0.379719 | 4.2:-40611044 | None:intergenic |
AACAAAATTAGTATCATTGA+TGG | 0.379750 | 4.2:-40612460 | None:intergenic |
AGCATGTAGAATGTGGCATT+TGG | 0.380488 | 4.2:-40612312 | None:intergenic |
GACAAAGAGGAACTCTCTTC+TGG | 0.381182 | 4.2:+40611091 | MS.gene30569:CDS |
AAAAGCATGGTTACCGTGAA+TGG | 0.383433 | 4.2:+40610570 | None:intergenic |
AGGGGACAGATTATTGGTTA+AGG | 0.383575 | 4.2:+40610626 | MS.gene30569:CDS |
GTACCCTGCCCTGTGAAATA+TGG | 0.385825 | 4.2:-40612342 | None:intergenic |
TAGAGTTCAGGTTATATTGC+AGG | 0.393539 | 4.2:+40612842 | MS.gene30569:CDS |
TACCGTGAATGGGAAGTTCC+CGG | 0.400570 | 4.2:+40610581 | MS.gene30569:CDS |
GAGAATGGGGACTTCCTTGT+AGG | 0.406530 | 4.2:-40611202 | None:intergenic |
GTGTAGGCATCAGAAACATT+TGG | 0.413299 | 4.2:-40611488 | None:intergenic |
GCATGTAGAATGTGGCATTT+GGG | 0.416680 | 4.2:-40612311 | None:intergenic |
ACCATATAACACTAGAGTTC+AGG | 0.422189 | 4.2:+40612830 | MS.gene30569:CDS |
GTATAGTTAAACGGCCTTAA+CGG | 0.423945 | 4.2:-40612753 | None:intergenic |
TTCGACAATTCCACAGTAGC+TGG | 0.425573 | 4.2:+40612366 | MS.gene30569:CDS |
AATTTCTTTGTTGTTGGTCA+AGG | 0.431250 | 4.2:+40612915 | MS.gene30569:CDS |
TTAAGGCCGTTTAACTATAC+AGG | 0.432215 | 4.2:+40612756 | MS.gene30569:CDS |
AACAATACTTTGGTTAGTAA+TGG | 0.432888 | 4.2:+40612789 | MS.gene30569:CDS |
GATAAGATTCATTGTGCCTT+GGG | 0.433565 | 4.2:-40611167 | None:intergenic |
GAGGTCAGGAAACCCATTAA+TGG | 0.434524 | 4.2:-40611510 | None:intergenic |
GTGTACAACTTCACCATTGT+TGG | 0.440870 | 4.2:+40611069 | MS.gene30569:CDS |
TTCATATGTACCAAAGAGAA+TGG | 0.444243 | 4.2:-40611217 | None:intergenic |
AACGGCCTTAACGGTACAAC+CGG | 0.445112 | 4.2:-40612744 | None:intergenic |
TGTAGGCATCAGAAACATTT+GGG | 0.450843 | 4.2:-40611487 | None:intergenic |
GGAGCAATTGTAAAGAGGTC+AGG | 0.454627 | 4.2:-40611524 | None:intergenic |
GCAACAGTATTCCTCTCAAC+AGG | 0.458149 | 4.2:-40612990 | None:intergenic |
AACTCCTCCAAACAATACTT+TGG | 0.459111 | 4.2:+40612779 | MS.gene30569:CDS |
GGATAAGATTCATTGTGCCT+TGG | 0.462220 | 4.2:-40611168 | None:intergenic |
TCATTGATGGCTGGAAGCAC+AGG | 0.471762 | 4.2:-40612447 | None:intergenic |
AAAATAGTTCTTACCAATGC+AGG | 0.472186 | 4.2:-40610677 | None:intergenic |
GGAGTTCCTGTATAGTTAAA+CGG | 0.473322 | 4.2:-40612762 | None:intergenic |
TCATATGTACCAAAGAGAAT+GGG | 0.475158 | 4.2:-40611216 | None:intergenic |
TCTGGCATGCTCATTTCTCA+TGG | 0.475847 | 4.2:+40611109 | MS.gene30569:CDS |
TAGTTCCAAAGAAATGTTGT+TGG | 0.480695 | 4.2:-40612698 | None:intergenic |
ATTGCACAAGCTCTGCAGAC+AGG | 0.483287 | 4.2:+40611458 | MS.gene30569:CDS |
ACTCAATGCCCAATTCAAAC+AGG | 0.483829 | 4.2:+40611036 | MS.gene30569:CDS |
CGGTTCCTTGCTGACAATCC+AGG | 0.486079 | 4.2:+40613041 | MS.gene30569:CDS |
CCTTGAAAATAATGATGACT+TGG | 0.494144 | 4.2:+40615216 | MS.gene30569:CDS |
TTCACCATTGTTGGACAAAG+AGG | 0.495747 | 4.2:+40611078 | MS.gene30569:CDS |
GGGCATTGAGTTATGTATGA+TGG | 0.498399 | 4.2:-40611024 | None:intergenic |
CCTTCTCGTACAACAATTCG+AGG | 0.499048 | 4.2:-40610606 | None:intergenic |
TGGTCCAAGTATGATGGTAT+TGG | 0.499764 | 4.2:-40612247 | None:intergenic |
CCTCTTTACAATTGCTCCAA+AGG | 0.502310 | 4.2:+40611529 | MS.gene30569:CDS |
ACCCGGGAACTTCCCATTCA+CGG | 0.507216 | 4.2:-40610583 | None:intergenic |
CTTCGTAGTGGTTGGTCGGA+TGG | 0.508027 | 4.2:+40611000 | MS.gene30569:CDS |
CTCGAATTGTTGTACGAGAA+GGG | 0.509000 | 4.2:+40610607 | MS.gene30569:CDS |
TGTTGGAGAAGTGCTATAGA+AGG | 0.510179 | 4.2:-40612681 | None:intergenic |
AAAGCATGGTTACCGTGAAT+GGG | 0.513288 | 4.2:+40610571 | None:intergenic |
ATTCATTGTGCCTTGGGAGA+AGG | 0.517082 | 4.2:-40611161 | None:intergenic |
AGAATGGGGACTTCCTTGTA+GGG | 0.517590 | 4.2:-40611201 | None:intergenic |
TAGACCATATTTCACAGGGC+AGG | 0.518387 | 4.2:+40612338 | MS.gene30569:CDS |
TGAAAATAATGATGACTTGG+TGG | 0.520153 | 4.2:+40615219 | MS.gene30569:CDS |
CTAGCTAGACCATATTTCAC+AGG | 0.529517 | 4.2:+40612333 | MS.gene30569:CDS |
TACAAATTGAAGGTGAAGCC+AGG | 0.530121 | 4.2:+40612105 | MS.gene30569:intron |
AGAACATTTGTGGTTTGACC+TGG | 0.536892 | 4.2:-40612267 | None:intergenic |
CTAACCAAAGTATTGTTTGG+AGG | 0.538509 | 4.2:-40612783 | None:intergenic |
TTGCACAAGCTCTGCAGACA+GGG | 0.538737 | 4.2:+40611459 | MS.gene30569:CDS |
CCTTTGGAGCAATTGTAAAG+AGG | 0.542692 | 4.2:-40611529 | None:intergenic |
ACCGTGAATGGGAAGTTCCC+GGG | 0.543276 | 4.2:+40610582 | MS.gene30569:CDS |
GAGTCCAATACCATCATACT+TGG | 0.543746 | 4.2:+40612243 | MS.gene30569:CDS |
CCTCGAATTGTTGTACGAGA+AGG | 0.546915 | 4.2:+40610606 | MS.gene30569:CDS |
TCAAGGAGTTGTTCAACAAG+AGG | 0.550486 | 4.2:-40615199 | None:intergenic |
ACTGTTGCTGTGCCTTCTGG+TGG | 0.553231 | 4.2:+40613005 | MS.gene30569:CDS |
CAACAAGATTAAACTTTGCA+GGG | 0.564792 | 4.2:-40612965 | None:intergenic |
CGTACAACAATTCGAGGACC+CGG | 0.566305 | 4.2:-40610600 | None:intergenic |
TGAGACAACTTCGTAGTGGT+TGG | 0.574177 | 4.2:+40610992 | MS.gene30569:CDS |
TTAAATCCATGAAGATGCAA+AGG | 0.575251 | 4.2:-40612894 | None:intergenic |
TTCTAAAATTCCAGCTACTG+TGG | 0.577452 | 4.2:-40612376 | None:intergenic |
AGGAAACCCATTAATGGTGT+AGG | 0.579472 | 4.2:-40611504 | None:intergenic |
AAATTAGTATCATTGATGGC+TGG | 0.579956 | 4.2:-40612456 | None:intergenic |
AAAGTGGAAGCTATCAAAGA+AGG | 0.580593 | 4.2:-40615263 | None:intergenic |
CAAACAATATCAGCCTGCAT+TGG | 0.581284 | 4.2:+40610664 | MS.gene30569:CDS |
GAAAAGCTCTTCAAAAGTAG+TGG | 0.583616 | 4.2:+40615160 | MS.gene30569:CDS |
TTGACCTGGTCCAAGTATGA+TGG | 0.586103 | 4.2:-40612253 | None:intergenic |
GACCTCTCATCCTTCTCCCA+AGG | 0.596454 | 4.2:+40611151 | MS.gene30569:CDS |
AATCACCTGGATTGTCAGCA+AGG | 0.599526 | 4.2:-40613046 | None:intergenic |
ACAACTTCGTAGTGGTTGGT+CGG | 0.604046 | 4.2:+40610996 | MS.gene30569:CDS |
ATCTTGTTGATCCTGTTGAG+AGG | 0.606779 | 4.2:+40612979 | MS.gene30569:CDS |
AGTTCCTCTTTGTCCAACAA+TGG | 0.608427 | 4.2:-40611082 | None:intergenic |
AGACCATATTTCACAGGGCA+GGG | 0.613998 | 4.2:+40612339 | MS.gene30569:CDS |
TCGAATTGTTGTACGAGAAG+GGG | 0.619585 | 4.2:+40610608 | MS.gene30569:CDS |
TGCCTTGGGAGAAGGATGAG+AGG | 0.645507 | 4.2:-40611153 | None:intergenic |
ATGATGGTATTGGACTCGAA+TGG | 0.647830 | 4.2:-40612237 | None:intergenic |
CATATGTACCAAAGAGAATG+GGG | 0.650276 | 4.2:-40611215 | None:intergenic |
TGGACTAGTTCCTAGTCCAA+CGG | 0.652330 | 4.2:-40612571 | None:intergenic |
GACAAATATGCATAGGTGAG+TGG | 0.653174 | 4.2:+40611411 | MS.gene30569:intron |
GTACAACAATTCGAGGACCC+GGG | 0.658530 | 4.2:-40610599 | None:intergenic |
AAATATGCATAGGTGAGTGG+TGG | 0.659012 | 4.2:+40611414 | MS.gene30569:intron |
TCTAGCTAGCATGTAGAATG+TGG | 0.659413 | 4.2:-40612319 | None:intergenic |
TGCACAAGCTCTGCAGACAG+GGG | 0.660853 | 4.2:+40611460 | MS.gene30569:CDS |
ATAGCAACCCAACCACCAGA+AGG | 0.667114 | 4.2:-40613017 | None:intergenic |
AAGATGCATCTGCTTCGACA+AGG | 0.668532 | 4.2:-40612206 | None:intergenic |
GCACAAGCTCTGCAGACAGG+GGG | 0.670081 | 4.2:+40611461 | MS.gene30569:CDS |
TAGCTAGACCATATTTCACA+GGG | 0.683532 | 4.2:+40612334 | MS.gene30569:CDS |
AATACCATCATACTTGGACC+AGG | 0.697209 | 4.2:+40612249 | MS.gene30569:CDS |
TAGTAATGGAACAAAGACAG+TGG | 0.719057 | 4.2:+40612803 | MS.gene30569:CDS |
GGTGTGAGACAACTTCGTAG+TGG | 0.741558 | 4.2:+40610988 | MS.gene30569:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACTATATGATATATAATATT+TGG | - | chr4.2:40613329-40613348 | None:intergenic | 10.0% |
!! | TTTATTATAAATTTATACTG+AGG | - | chr4.2:40611251-40611270 | None:intergenic | 10.0% |
!! | TTTATTCTTTGTAAATAAAA+AGG | - | chr4.2:40614525-40614544 | None:intergenic | 10.0% |
!!! | AACTTTTTATTCAAAAAAAA+AGG | + | chr4.2:40613898-40613917 | MS.gene30569:intron | 10.0% |
!!! | ACTTTTTATTCAAAAAAAAA+GGG | + | chr4.2:40613899-40613918 | MS.gene30569:intron | 10.0% |
!!! | TATTTTTATTTGAATTTAGA+GGG | - | chr4.2:40614889-40614908 | None:intergenic | 10.0% |
!! | AAAATAGTATATGATATGAA+AGG | + | chr4.2:40611364-40611383 | MS.gene30569:intron | 15.0% |
!! | AATAAATATACTTGAGAATT+GGG | - | chr4.2:40614139-40614158 | None:intergenic | 15.0% |
!! | AGAAAGAAAGAAAAAAAAAT+AGG | + | chr4.2:40614861-40614880 | MS.gene30569:intron | 15.0% |
!! | TAATAAATATACTTGAGAAT+TGG | - | chr4.2:40614140-40614159 | None:intergenic | 15.0% |
!! | TGCTCAAAATAATAATAATT+TGG | - | chr4.2:40614497-40614516 | None:intergenic | 15.0% |
!! | TTTGAATTTGAACTATTATT+TGG | - | chr4.2:40612624-40612643 | None:intergenic | 15.0% |
!!! | ATGTATTTTTCTCATATTTT+TGG | + | chr4.2:40613946-40613965 | MS.gene30569:intron | 15.0% |
!!! | CTATTTTTATTTGAATTTAG+AGG | - | chr4.2:40614890-40614909 | None:intergenic | 15.0% |
!!! | TATTGATTATCAATTCAAAT+AGG | + | chr4.2:40614192-40614211 | MS.gene30569:intron | 15.0% |
!!! | TTTTTATTTGTTTGATCATT+TGG | - | chr4.2:40612411-40612430 | None:intergenic | 15.0% |
!! | AACAAAATTAGTATCATTGA+TGG | - | chr4.2:40612463-40612482 | None:intergenic | 20.0% |
!! | AATATCATTGTACTTACTTA+AGG | + | chr4.2:40613866-40613885 | MS.gene30569:intron | 20.0% |
!! | AGATTAATAGTATTCCTAAA+GGG | - | chr4.2:40614972-40614991 | None:intergenic | 20.0% |
!! | ATATCATTGTACTTACTTAA+GGG | + | chr4.2:40613867-40613886 | MS.gene30569:intron | 20.0% |
!! | CATAAATCCTTAAATTTACA+TGG | - | chr4.2:40613690-40613709 | None:intergenic | 20.0% |
!! | CATGTAAATTTAAGGATTTA+TGG | + | chr4.2:40613688-40613707 | MS.gene30569:intron | 20.0% |
!! | TATTTACTTCATTCTAGTAT+TGG | - | chr4.2:40614784-40614803 | None:intergenic | 20.0% |
!! | TGTACTAATATTGACAATAA+TGG | + | chr4.2:40610935-40610954 | MS.gene30569:intron | 20.0% |
!!! | AAATTAGTTTGTAAAATGAG+AGG | - | chr4.2:40611967-40611986 | None:intergenic | 20.0% |
!!! | AACTAATAATGGTTTTACAA+CGG | + | chr4.2:40612716-40612735 | MS.gene30569:CDS | 20.0% |
!!! | AAGTTTTTGTCAATAGTTTT+AGG | - | chr4.2:40612543-40612562 | None:intergenic | 20.0% |
!!! | AGTTTTTAATAGAACATTTG+TGG | - | chr4.2:40612280-40612299 | None:intergenic | 20.0% |
!!! | ATTAGAACATTATTTTTGAG+TGG | + | chr4.2:40614608-40614627 | MS.gene30569:intron | 20.0% |
!!! | TTTGTTTTTCACCTTTTTAT+GGG | + | chr4.2:40614392-40614411 | MS.gene30569:intron | 20.0% |
!!! | TTTTGTTTTTCACCTTTTTA+TGG | + | chr4.2:40614391-40614410 | MS.gene30569:intron | 20.0% |
!!! | TTTTTGAAAGATGAATTGAT+TGG | + | chr4.2:40612055-40612074 | MS.gene30569:intron | 20.0% |
! | AAAATAGTTGTCCATTGAAA+AGG | + | chr4.2:40614903-40614922 | MS.gene30569:intron | 25.0% |
! | AAATAGTTGTCCATTGAAAA+GGG | + | chr4.2:40614904-40614923 | MS.gene30569:intron | 25.0% |
! | AACAATACTTTGGTTAGTAA+TGG | + | chr4.2:40612789-40612808 | MS.gene30569:CDS | 25.0% |
! | AATAATTCATTTCATGCGTA+TGG | - | chr4.2:40610916-40610935 | None:intergenic | 25.0% |
! | AATGGAAATGGAAAATCAAA+AGG | - | chr4.2:40613660-40613679 | None:intergenic | 25.0% |
! | AATTTACATGGAAATGGAAA+TGG | - | chr4.2:40613678-40613697 | None:intergenic | 25.0% |
! | ACTAGAATTGATGAATTGAT+TGG | + | chr4.2:40612021-40612040 | MS.gene30569:intron | 25.0% |
! | AGCTTATGAAAACAGTTTAT+AGG | - | chr4.2:40613182-40613201 | None:intergenic | 25.0% |
! | ATATTGTATGTTGTACATCA+TGG | + | chr4.2:40610875-40610894 | MS.gene30569:intron | 25.0% |
! | ATCATTCCAAAAAGAAAAAG+AGG | + | chr4.2:40614750-40614769 | MS.gene30569:intron | 25.0% |
! | ATCCATTACAAAACAGTTTA+AGG | + | chr4.2:40615288-40615307 | MS.gene30569:CDS | 25.0% |
! | ATGAATCTAGCATTATTGTA+TGG | + | chr4.2:40614671-40614690 | MS.gene30569:intron | 25.0% |
! | GAGATTAATAGTATTCCTAA+AGG | - | chr4.2:40614973-40614992 | None:intergenic | 25.0% |
! | GTTTCTTTAGTAAGGAAAAT+TGG | - | chr4.2:40613626-40613645 | None:intergenic | 25.0% |
! | TAGTTCAAATTGTTACACTT+TGG | - | chr4.2:40614347-40614366 | None:intergenic | 25.0% |
! | TATCTTTGACAAATATGCAT+AGG | + | chr4.2:40611404-40611423 | MS.gene30569:intron | 25.0% |
! | TCATATATTTGCTTAATGCA+AGG | - | chr4.2:40614655-40614674 | None:intergenic | 25.0% |
! | TCCATTTCCATGTAAATTTA+AGG | + | chr4.2:40613680-40613699 | MS.gene30569:intron | 25.0% |
! | TCCTTAAATTTACATGGAAA+TGG | - | chr4.2:40613684-40613703 | None:intergenic | 25.0% |
! | TTCAAGTGACCAAAAAATAA+AGG | + | chr4.2:40613818-40613837 | MS.gene30569:intron | 25.0% |
!! | AAAATCAAAAGGTGTAGAAA+AGG | - | chr4.2:40613649-40613668 | None:intergenic | 25.0% |
!! | AAACAAGATTTTACATCATG+AGG | - | chr4.2:40615033-40615052 | None:intergenic | 25.0% |
!! | AAATCAAAAGGTGTAGAAAA+GGG | - | chr4.2:40613648-40613667 | None:intergenic | 25.0% |
!! | AACATTTTCTTTATCCTAAG+TGG | - | chr4.2:40611919-40611938 | None:intergenic | 25.0% |
!! | ACTTTATTTGTGTGTTTAGA+AGG | - | chr4.2:40614555-40614574 | None:intergenic | 25.0% |
!! | GGATTTAATTTCTTTGTTGT+TGG | + | chr4.2:40612909-40612928 | MS.gene30569:CDS | 25.0% |
!! | TTCCTTAAACTGTTTTGTAA+TGG | - | chr4.2:40615293-40615312 | None:intergenic | 25.0% |
!!! | AAAAACTTTTTCTTTACCGT+TGG | + | chr4.2:40612555-40612574 | MS.gene30569:CDS | 25.0% |
!!! | AAACTAAGTGTTGAGAAAAT+AGG | + | chr4.2:40610763-40610782 | MS.gene30569:intron | 25.0% |
!!! | ATCTATTTGCTATGAATGTA+TGG | + | chr4.2:40613439-40613458 | MS.gene30569:intron | 25.0% |
!!! | ATTGGTTTGTTATCATATCA+TGG | + | chr4.2:40612073-40612092 | MS.gene30569:intron | 25.0% |
!!! | CATTTCTTTGGAACTAATAA+TGG | + | chr4.2:40612705-40612724 | MS.gene30569:CDS | 25.0% |
!!! | CTGGAGTTTATACTTTTTTA+AGG | + | chr4.2:40611305-40611324 | MS.gene30569:intron | 25.0% |
!!! | TGGTATTTTATATTTCTAGC+TGG | + | chr4.2:40611286-40611305 | MS.gene30569:intron | 25.0% |
!!! | TTACTAACCAAAGTATTGTT+TGG | - | chr4.2:40612789-40612808 | None:intergenic | 25.0% |
!!! | TTTCTGTTCTTTTGCTATAT+TGG | + | chr4.2:40615051-40615070 | MS.gene30569:intron | 25.0% |
!!! | TTTTTGGTCACTTGAAAATT+AGG | - | chr4.2:40613814-40613833 | None:intergenic | 25.0% |
AAAATAGTTCTTACCAATGC+AGG | - | chr4.2:40610680-40610699 | None:intergenic | 30.0% | |
AAGTGACCAAAAAATAAAGG+TGG | + | chr4.2:40613821-40613840 | MS.gene30569:intron | 30.0% | |
AATAGTTGTCCATTGAAAAG+GGG | + | chr4.2:40614905-40614924 | MS.gene30569:intron | 30.0% | |
AATCTAGCATTATTGTATGG+TGG | + | chr4.2:40614674-40614693 | MS.gene30569:intron | 30.0% | |
ACTTATTTAAGCTGATCTGT+TGG | - | chr4.2:40613302-40613321 | None:intergenic | 30.0% | |
AGAAAAGGGTTTCTTTAGTA+AGG | - | chr4.2:40613634-40613653 | None:intergenic | 30.0% | |
AGCATCATAGTAGTACTATT+TGG | - | chr4.2:40614456-40614475 | None:intergenic | 30.0% | |
ATCATTCTAATATGTCACAG+TGG | - | chr4.2:40614283-40614302 | None:intergenic | 30.0% | |
CAACAAGATTAAACTTTGCA+GGG | - | chr4.2:40612968-40612987 | None:intergenic | 30.0% | |
CATATTAGAATGATTGGAAC+TGG | + | chr4.2:40614289-40614308 | MS.gene30569:intron | 30.0% | |
CCTTGAAAATAATGATGACT+TGG | + | chr4.2:40615216-40615235 | MS.gene30569:CDS | 30.0% | |
CTGTGACATATTAGAATGAT+TGG | + | chr4.2:40614283-40614302 | MS.gene30569:intron | 30.0% | |
GACAGATACATACAAATTGA+AGG | + | chr4.2:40612095-40612114 | MS.gene30569:intron | 30.0% | |
GATAAAACGCTTGAATCATA+CGG | - | chr4.2:40613991-40614010 | None:intergenic | 30.0% | |
GTGAAAAACAAAAGAATCAC+TGG | - | chr4.2:40614384-40614403 | None:intergenic | 30.0% | |
TAGTTCCAAAGAAATGTTGT+TGG | - | chr4.2:40612701-40612720 | None:intergenic | 30.0% | |
TATGAATGTATGGTTGAAAC+AGG | + | chr4.2:40613449-40613468 | MS.gene30569:intron | 30.0% | |
TCAACAAGATTAAACTTTGC+AGG | - | chr4.2:40612969-40612988 | None:intergenic | 30.0% | |
TCATATGTACCAAAGAGAAT+GGG | - | chr4.2:40611219-40611238 | None:intergenic | 30.0% | |
TCTACAGACGAATAAAATAC+AGG | - | chr4.2:40614027-40614046 | None:intergenic | 30.0% | |
TCTTCTACATCTAATAACAG+TGG | - | chr4.2:40615130-40615149 | None:intergenic | 30.0% | |
TGAGAAAATAGGATTTGAAC+CGG | + | chr4.2:40610774-40610793 | MS.gene30569:intron | 30.0% | |
TGATACAATGAAAGAAAGAC+TGG | - | chr4.2:40613778-40613797 | None:intergenic | 30.0% | |
TGCATGCATGATAAAAAAAC+AGG | + | chr4.2:40610962-40610981 | MS.gene30569:intron | 30.0% | |
TGCTAATGTGCAAAACTTAT+AGG | + | chr4.2:40614806-40614825 | MS.gene30569:intron | 30.0% | |
TGGTGTAGTAATCAACATTT+GGG | - | chr4.2:40613593-40613612 | None:intergenic | 30.0% | |
TTAAATCCATGAAGATGCAA+AGG | - | chr4.2:40612897-40612916 | None:intergenic | 30.0% | |
TTAATAGTATTCCTAAAGGG+AGG | - | chr4.2:40614969-40614988 | None:intergenic | 30.0% | |
TTCATATGTACCAAAGAGAA+TGG | - | chr4.2:40611220-40611239 | None:intergenic | 30.0% | |
TTCGTAGTGAACATATACAT+AGG | - | chr4.2:40614075-40614094 | None:intergenic | 30.0% | |
TTGGTGTAGTAATCAACATT+TGG | - | chr4.2:40613594-40613613 | None:intergenic | 30.0% | |
! | AAATTAGTATCATTGATGGC+TGG | - | chr4.2:40612459-40612478 | None:intergenic | 30.0% |
! | CATCTTCCTCTTTTTCTTTT+TGG | - | chr4.2:40614759-40614778 | None:intergenic | 30.0% |
! | CCAAGTCATCATTATTTTCA+AGG | - | chr4.2:40615219-40615238 | None:intergenic | 30.0% |
! | CCTTTTTATGGGAAAAACAA+AGG | + | chr4.2:40614403-40614422 | MS.gene30569:intron | 30.0% |
! | CGTAATAGATATGTTTTTCC+TGG | - | chr4.2:40612126-40612145 | None:intergenic | 30.0% |
! | TGAAAATAATGATGACTTGG+TGG | + | chr4.2:40615219-40615238 | MS.gene30569:CDS | 30.0% |
! | TGTGAGTTTTGCAGTTAATT+AGG | - | chr4.2:40610742-40610761 | None:intergenic | 30.0% |
!! | AATTTCTTTGTTGTTGGTCA+AGG | + | chr4.2:40612915-40612934 | MS.gene30569:CDS | 30.0% |
!!! | AAACCACCACCTTTATTTTT+TGG | - | chr4.2:40613830-40613849 | None:intergenic | 30.0% |
!!! | CCTTTGTTTTTCCCATAAAA+AGG | - | chr4.2:40614406-40614425 | None:intergenic | 30.0% |
!!! | CTTGACAAGTTTGGTTTTTT+GGG | - | chr4.2:40612599-40612618 | None:intergenic | 30.0% |
!!! | GTTTTGTAATGGATGAAAAG+TGG | - | chr4.2:40615282-40615301 | None:intergenic | 30.0% |
AAAGTGGAAGCTATCAAAGA+AGG | - | chr4.2:40615266-40615285 | None:intergenic | 35.0% | |
AACTCCTCCAAACAATACTT+TGG | + | chr4.2:40612779-40612798 | MS.gene30569:CDS | 35.0% | |
AACTCTGACCTGTTTGAATT+GGG | - | chr4.2:40611047-40611066 | None:intergenic | 35.0% | |
AATGTGGCATTTGGGTAATT+TGG | - | chr4.2:40612306-40612325 | None:intergenic | 35.0% | |
ACAACGACATTTGATATGCT+TGG | - | chr4.2:40610803-40610822 | None:intergenic | 35.0% | |
ACCATATAACACTAGAGTTC+AGG | + | chr4.2:40612830-40612849 | MS.gene30569:CDS | 35.0% | |
ACCTGAACTCTAGTGTTATA+TGG | - | chr4.2:40612834-40612853 | None:intergenic | 35.0% | |
ATGTTCACTACGAACAACAA+CGG | + | chr4.2:40614081-40614100 | MS.gene30569:intron | 35.0% | |
CAACGACATTTGATATGCTT+GGG | - | chr4.2:40610802-40610821 | None:intergenic | 35.0% | |
CATATACATAGGATTCACAG+TGG | - | chr4.2:40614064-40614083 | None:intergenic | 35.0% | |
CATATGTACCAAAGAGAATG+GGG | - | chr4.2:40611218-40611237 | None:intergenic | 35.0% | |
CATGGAAATGGAAATGGAAA+TGG | - | chr4.2:40613672-40613691 | None:intergenic | 35.0% | |
CCAAAAAACCAAACTTGTCA+AGG | + | chr4.2:40612597-40612616 | MS.gene30569:CDS | 35.0% | |
CTTCTCCAACAACATTTCTT+TGG | + | chr4.2:40612693-40612712 | MS.gene30569:CDS | 35.0% | |
GAAAAAACCAAGTTCCACTT+AGG | + | chr4.2:40611902-40611921 | MS.gene30569:intron | 35.0% | |
GAAAAGCTCTTCAAAAGTAG+TGG | + | chr4.2:40615160-40615179 | MS.gene30569:CDS | 35.0% | |
GAATCATCATATACTAGTGC+CGG | - | chr4.2:40613756-40613775 | None:intergenic | 35.0% | |
GATAAGATTCATTGTGCCTT+GGG | - | chr4.2:40611170-40611189 | None:intergenic | 35.0% | |
GCATGATAAAAAAACAGGCA+TGG | + | chr4.2:40610967-40610986 | MS.gene30569:intron | 35.0% | |
GGAGTTCCTGTATAGTTAAA+CGG | - | chr4.2:40612765-40612784 | None:intergenic | 35.0% | |
GGTGTAGTAATCAACATTTG+GGG | - | chr4.2:40613592-40613611 | None:intergenic | 35.0% | |
GTATAGTTAAACGGCCTTAA+CGG | - | chr4.2:40612756-40612775 | None:intergenic | 35.0% | |
GTGCATTTCTTACCTATTGA+TGG | + | chr4.2:40615073-40615092 | MS.gene30569:intron | 35.0% | |
TAACTCTGACCTGTTTGAAT+TGG | - | chr4.2:40611048-40611067 | None:intergenic | 35.0% | |
TAGCTAGACCATATTTCACA+GGG | + | chr4.2:40612334-40612353 | MS.gene30569:CDS | 35.0% | |
TATTTGGTCCTTGACAAGTT+TGG | - | chr4.2:40612608-40612627 | None:intergenic | 35.0% | |
TCACAGAAGAATCCATCAAT+AGG | - | chr4.2:40615088-40615107 | None:intergenic | 35.0% | |
TCTTTATCCTAAGTGGAACT+TGG | - | chr4.2:40611912-40611931 | None:intergenic | 35.0% | |
TGACCAAAAAATAAAGGTGG+TGG | + | chr4.2:40613824-40613843 | MS.gene30569:intron | 35.0% | |
TGCACAGTATATGCAAAATG+TGG | - | chr4.2:40613718-40613737 | None:intergenic | 35.0% | |
TGTACATCATGGATCTAGTT+AGG | + | chr4.2:40610886-40610905 | MS.gene30569:intron | 35.0% | |
TGTAGGCATCAGAAACATTT+GGG | - | chr4.2:40611490-40611509 | None:intergenic | 35.0% | |
TTAAGGCCGTTTAACTATAC+AGG | + | chr4.2:40612756-40612775 | MS.gene30569:CDS | 35.0% | |
TTTGTGCCAACAAACTAACA+TGG | + | chr4.2:40614997-40615016 | MS.gene30569:intron | 35.0% | |
TTTGTGTGTTTAGAAGGACA+AGG | - | chr4.2:40614549-40614568 | None:intergenic | 35.0% | |
! | ATTGCAGGATACAAGCATTT+TGG | + | chr4.2:40612857-40612876 | MS.gene30569:CDS | 35.0% |
! | TAGAGTTCAGGTTATATTGC+AGG | + | chr4.2:40612842-40612861 | MS.gene30569:CDS | 35.0% |
! | TAGTAATGGAACAAAGACAG+TGG | + | chr4.2:40612803-40612822 | MS.gene30569:CDS | 35.0% |
! | TCCTTTTCAAAAACCCTACA+AGG | + | chr4.2:40611188-40611207 | MS.gene30569:CDS | 35.0% |
! | TGATTGACTATGGTTCTGTT+TGG | + | chr4.2:40613064-40613083 | MS.gene30569:intron | 35.0% |
! | TTGCAGGATACAAGCATTTT+GGG | + | chr4.2:40612858-40612877 | MS.gene30569:CDS | 35.0% |
! | TTTTTCTTTACCGTTGGACT+AGG | + | chr4.2:40612561-40612580 | MS.gene30569:CDS | 35.0% |
!! | CTAACCAAAGTATTGTTTGG+AGG | - | chr4.2:40612786-40612805 | None:intergenic | 35.0% |
!! | CTTATTTTCGTAAGTTCTCC+AGG | - | chr4.2:40613207-40613226 | None:intergenic | 35.0% |
!! | TCCTTGTAGGGTTTTTGAAA+AGG | - | chr4.2:40611192-40611211 | None:intergenic | 35.0% |
!! | TGGTTTTACAACGGATTTTC+CGG | + | chr4.2:40612725-40612744 | MS.gene30569:CDS | 35.0% |
!! | TTAGTTTGTTGGCACAAACA+TGG | - | chr4.2:40614995-40615014 | None:intergenic | 35.0% |
!! | TTCTAAAATTCCAGCTACTG+TGG | - | chr4.2:40612379-40612398 | None:intergenic | 35.0% |
!!! | ATAGTTTTAGGCACATTTGC+AGG | - | chr4.2:40612531-40612550 | None:intergenic | 35.0% |
!!! | CCTTGACAAGTTTGGTTTTT+TGG | - | chr4.2:40612600-40612619 | None:intergenic | 35.0% |
!!! | GAAGCACAGGTTTTAGAATA+TGG | - | chr4.2:40612437-40612456 | None:intergenic | 35.0% |
!!! | TAGTTTTAGGCACATTTGCA+GGG | - | chr4.2:40612530-40612549 | None:intergenic | 35.0% |
!!! | TTTGTTGTTGGTCAAGGTTT+TGG | + | chr4.2:40612921-40612940 | MS.gene30569:CDS | 35.0% |
AAATATGCATAGGTGAGTGG+TGG | + | chr4.2:40611414-40611433 | MS.gene30569:intron | 40.0% | |
AACTAAGGTGCACATCAAAG+TGG | - | chr4.2:40613493-40613512 | None:intergenic | 40.0% | |
AATACCATCATACTTGGACC+AGG | + | chr4.2:40612249-40612268 | MS.gene30569:CDS | 40.0% | |
ACAATCCAGGTGATTGACTA+TGG | + | chr4.2:40613054-40613073 | MS.gene30569:intron | 40.0% | |
ACGTGCAGCTTGTATATAAC+TGG | + | chr4.2:40611555-40611574 | MS.gene30569:intron | 40.0% | |
ACTCAATGCCCAATTCAAAC+AGG | + | chr4.2:40611036-40611055 | MS.gene30569:CDS | 40.0% | |
ACTTTGATGTGCACCTTAGT+TGG | + | chr4.2:40613492-40613511 | MS.gene30569:intron | 40.0% | |
AGAACATTTGTGGTTTGACC+TGG | - | chr4.2:40612270-40612289 | None:intergenic | 40.0% | |
AGCATGTAGAATGTGGCATT+TGG | - | chr4.2:40612315-40612334 | None:intergenic | 40.0% | |
AGGAAACCCATTAATGGTGT+AGG | - | chr4.2:40611507-40611526 | None:intergenic | 40.0% | |
AGTCATCCTTTGCATCTTCA+TGG | + | chr4.2:40612888-40612907 | MS.gene30569:CDS | 40.0% | |
AGTTCCTCTTTGTCCAACAA+TGG | - | chr4.2:40611085-40611104 | None:intergenic | 40.0% | |
ATCTTGTTGATCCTGTTGAG+AGG | + | chr4.2:40612979-40612998 | MS.gene30569:CDS | 40.0% | |
ATGGGAAAAACAAAGGAACG+TGG | + | chr4.2:40614410-40614429 | MS.gene30569:intron | 40.0% | |
CAAACAATATCAGCCTGCAT+TGG | + | chr4.2:40610664-40610683 | MS.gene30569:CDS | 40.0% | |
CAATGCAGGCTGATATTGTT+TGG | - | chr4.2:40610666-40610685 | None:intergenic | 40.0% | |
CCTCTTTACAATTGCTCCAA+AGG | + | chr4.2:40611529-40611548 | MS.gene30569:CDS | 40.0% | |
CTAGCTAGACCATATTTCAC+AGG | + | chr4.2:40612333-40612352 | MS.gene30569:CDS | 40.0% | |
CTCGAATTGTTGTACGAGAA+GGG | + | chr4.2:40610607-40610626 | MS.gene30569:CDS | 40.0% | |
CTGATGCCTACACCATTAAT+GGG | + | chr4.2:40611498-40611517 | MS.gene30569:CDS | 40.0% | |
CTTTGATGTGCACCTTAGTT+GGG | + | chr4.2:40613493-40613512 | MS.gene30569:intron | 40.0% | |
GACAAATATGCATAGGTGAG+TGG | + | chr4.2:40611411-40611430 | MS.gene30569:intron | 40.0% | |
GAGTCCAATACCATCATACT+TGG | + | chr4.2:40612243-40612262 | MS.gene30569:CDS | 40.0% | |
GCATGTAGAATGTGGCATTT+GGG | - | chr4.2:40612314-40612333 | None:intergenic | 40.0% | |
GGAAAATTGGCAGAGTCAAT+TGG | - | chr4.2:40613613-40613632 | None:intergenic | 40.0% | |
GGATAAGATTCATTGTGCCT+TGG | - | chr4.2:40611171-40611190 | None:intergenic | 40.0% | |
GTATGGTTGAAACAGGTGTT+TGG | + | chr4.2:40613456-40613475 | MS.gene30569:intron | 40.0% | |
GTGTACAACTTCACCATTGT+TGG | + | chr4.2:40611069-40611088 | MS.gene30569:CDS | 40.0% | |
GTGTAGGCATCAGAAACATT+TGG | - | chr4.2:40611491-40611510 | None:intergenic | 40.0% | |
GTGTGTGAGAGTAAAACTCA+TGG | - | chr4.2:40610834-40610853 | None:intergenic | 40.0% | |
TACAAATTGAAGGTGAAGCC+AGG | + | chr4.2:40612105-40612124 | MS.gene30569:intron | 40.0% | |
TCAAGGAGTTGTTCAACAAG+AGG | - | chr4.2:40615202-40615221 | None:intergenic | 40.0% | |
TCGAATTGTTGTACGAGAAG+GGG | + | chr4.2:40610608-40610627 | MS.gene30569:CDS | 40.0% | |
TCTAGCTAGCATGTAGAATG+TGG | - | chr4.2:40612322-40612341 | None:intergenic | 40.0% | |
TCTGATGCCTACACCATTAA+TGG | + | chr4.2:40611497-40611516 | MS.gene30569:CDS | 40.0% | |
TGGTCCAAGTATGATGGTAT+TGG | - | chr4.2:40612250-40612269 | None:intergenic | 40.0% | |
TGGTTAAGAGCTACTGTCTA+TGG | + | chr4.2:40611129-40611148 | MS.gene30569:CDS | 40.0% | |
TGTTCACTACGAACAACAAC+GGG | + | chr4.2:40614082-40614101 | MS.gene30569:intron | 40.0% | |
TTATTCGTCTGTAGACGAAG+TGG | + | chr4.2:40614032-40614051 | MS.gene30569:intron | 40.0% | |
TTCACCATTGTTGGACAAAG+AGG | + | chr4.2:40611078-40611097 | MS.gene30569:CDS | 40.0% | |
TTTGATGTGCACCTTAGTTG+GGG | + | chr4.2:40613494-40613513 | MS.gene30569:intron | 40.0% | |
! | ACTGTTTTCATAAGCTGTCC+TGG | + | chr4.2:40613186-40613205 | MS.gene30569:intron | 40.0% |
! | AGAATTTTACACTTGCGCAG+TGG | - | chr4.2:40614318-40614337 | None:intergenic | 40.0% |
! | AGGGGACAGATTATTGGTTA+AGG | + | chr4.2:40610626-40610645 | MS.gene30569:CDS | 40.0% |
! | ATGATGGTATTGGACTCGAA+TGG | - | chr4.2:40612240-40612259 | None:intergenic | 40.0% |
! | ATTTTCCGGTTGTACCGTTA+AGG | + | chr4.2:40612739-40612758 | MS.gene30569:CDS | 40.0% |
!! | CCTTTGGAGCAATTGTAAAG+AGG | - | chr4.2:40611532-40611551 | None:intergenic | 40.0% |
!! | GGAGGAGGCAATTTTTGATT+AGG | - | chr4.2:40613557-40613576 | None:intergenic | 40.0% |
!! | GGGCATTGAGTTATGTATGA+TGG | - | chr4.2:40611027-40611046 | None:intergenic | 40.0% |
!! | GTGTAGCCATGTTAGTTTGT+TGG | - | chr4.2:40615006-40615025 | None:intergenic | 40.0% |
!! | TGTTGGAGAAGTGCTATAGA+AGG | - | chr4.2:40612684-40612703 | None:intergenic | 40.0% |
!!! | CAAGTTTGGTTTTTTGGGCA+TGG | - | chr4.2:40612594-40612613 | None:intergenic | 40.0% |
AAAATTGCCTCCTCCTCCTA+AGG | + | chr4.2:40613562-40613581 | MS.gene30569:intron | 45.0% | |
AAGATGCATCTGCTTCGACA+AGG | - | chr4.2:40612209-40612228 | None:intergenic | 45.0% | |
AAGGAAGTCCCCATTCTCTT+TGG | + | chr4.2:40611207-40611226 | MS.gene30569:CDS | 45.0% | |
AATACTGTTGCTGTGCCTTC+TGG | + | chr4.2:40613002-40613021 | MS.gene30569:CDS | 45.0% | |
AATCACCTGGATTGTCAGCA+AGG | - | chr4.2:40613049-40613068 | None:intergenic | 45.0% | |
ACAACTTCGTAGTGGTTGGT+CGG | + | chr4.2:40610996-40611015 | MS.gene30569:CDS | 45.0% | |
ACGAGAAGGGGACAGATTAT+TGG | + | chr4.2:40610620-40610639 | MS.gene30569:CDS | 45.0% | |
AGAATGGGGACTTCCTTGTA+GGG | - | chr4.2:40611204-40611223 | None:intergenic | 45.0% | |
AGACCATATTTCACAGGGCA+GGG | + | chr4.2:40612339-40612358 | MS.gene30569:CDS | 45.0% | |
ATTCATTGTGCCTTGGGAGA+AGG | - | chr4.2:40611164-40611183 | None:intergenic | 45.0% | |
CAACATTTGGGGAGATCCTT+AGG | - | chr4.2:40613581-40613600 | None:intergenic | 45.0% | |
CAGAACCATAGTCAATCACC+TGG | - | chr4.2:40613062-40613081 | None:intergenic | 45.0% | |
CCTCGAATTGTTGTACGAGA+AGG | + | chr4.2:40610606-40610625 | MS.gene30569:CDS | 45.0% | |
CCTTCTCGTACAACAATTCG+AGG | - | chr4.2:40610609-40610628 | None:intergenic | 45.0% | |
GACAAAGAGGAACTCTCTTC+TGG | + | chr4.2:40611091-40611110 | MS.gene30569:CDS | 45.0% | |
GAGGTCAGGAAACCCATTAA+TGG | - | chr4.2:40611513-40611532 | None:intergenic | 45.0% | |
GCAACAGTATTCCTCTCAAC+AGG | - | chr4.2:40612993-40613012 | None:intergenic | 45.0% | |
GCTTGTGCAATTACAGCTTC+AGG | - | chr4.2:40611449-40611468 | None:intergenic | 45.0% | |
GGAGCAATTGTAAAGAGGTC+AGG | - | chr4.2:40611527-40611546 | None:intergenic | 45.0% | |
TAGACCATATTTCACAGGGC+AGG | + | chr4.2:40612338-40612357 | MS.gene30569:CDS | 45.0% | |
TCTGGCATGCTCATTTCTCA+TGG | + | chr4.2:40611109-40611128 | MS.gene30569:CDS | 45.0% | |
TGAGACAACTTCGTAGTGGT+TGG | + | chr4.2:40610992-40611011 | MS.gene30569:CDS | 45.0% | |
TTCGACAATTCCACAGTAGC+TGG | + | chr4.2:40612366-40612385 | MS.gene30569:CDS | 45.0% | |
TTGACCTGGTCCAAGTATGA+TGG | - | chr4.2:40612256-40612275 | None:intergenic | 45.0% | |
! | ATGGCTTGGATTGTTGAGGA+TGG | + | chr4.2:40613524-40613543 | MS.gene30569:intron | 45.0% |
! | GAGTCAGATCCCCTTTTCAA+TGG | - | chr4.2:40614917-40614936 | None:intergenic | 45.0% |
!! | GGCACATTTGCAGGGTATTT+TGG | - | chr4.2:40612522-40612541 | None:intergenic | 45.0% |
!! | TGGACTAGTTCCTAGTCCAA+CGG | - | chr4.2:40612574-40612593 | None:intergenic | 45.0% |
!! | ATAAATAATTTATTATACTT+TGG | + | chr4.2:40611266-40611285 | MS.gene30569:intron | 5.0% |
!! | TAAAATATTATTAATTAAAG+TGG | - | chr4.2:40611867-40611886 | None:intergenic | 5.0% |
AACGGCCTTAACGGTACAAC+CGG | - | chr4.2:40612747-40612766 | None:intergenic | 50.0% | |
ACAAGCTGCACGTGTACCTT+TGG | - | chr4.2:40611548-40611567 | None:intergenic | 50.0% | |
ATAGCAACCCAACCACCAGA+AGG | - | chr4.2:40613020-40613039 | None:intergenic | 50.0% | |
ATTGCACAAGCTCTGCAGAC+AGG | + | chr4.2:40611458-40611477 | MS.gene30569:CDS | 50.0% | |
CATTTGATATGCTTGGGCGC+CGG | - | chr4.2:40610796-40610815 | None:intergenic | 50.0% | |
CATTTGGGGAGATCCTTAGG+AGG | - | chr4.2:40613578-40613597 | None:intergenic | 50.0% | |
CCATCCTCAATCCCCAACTA+AGG | - | chr4.2:40613508-40613527 | None:intergenic | 50.0% | |
CCTTAGTTGGGGATTGAGGA+TGG | + | chr4.2:40613505-40613524 | MS.gene30569:intron | 50.0% | |
CGTACAACAATTCGAGGACC+CGG | - | chr4.2:40610603-40610622 | None:intergenic | 50.0% | |
GAGAATGGGGACTTCCTTGT+AGG | - | chr4.2:40611205-40611224 | None:intergenic | 50.0% | |
GGTGTGAGACAACTTCGTAG+TGG | + | chr4.2:40610988-40611007 | MS.gene30569:CDS | 50.0% | |
GTACAACAATTCGAGGACCC+GGG | - | chr4.2:40610602-40610621 | None:intergenic | 50.0% | |
GTACCCTGCCCTGTGAAATA+TGG | - | chr4.2:40612345-40612364 | None:intergenic | 50.0% | |
TACCGTGAATGGGAAGTTCC+CGG | + | chr4.2:40610581-40610600 | MS.gene30569:CDS | 50.0% | |
TGCACCTTAGTTGGGGATTG+AGG | + | chr4.2:40613501-40613520 | MS.gene30569:intron | 50.0% | |
TGCAGAGAGTGAAGTGTGTC+CGG | + | chr4.2:40613734-40613753 | MS.gene30569:intron | 50.0% | |
TGCTATCTGCACCTCCCTTT+AGG | + | chr4.2:40614955-40614974 | MS.gene30569:intron | 50.0% | |
TTGCACAAGCTCTGCAGACA+GGG | + | chr4.2:40611459-40611478 | MS.gene30569:CDS | 50.0% | |
! | CTGGTGGTTGGGTTGCTATA+CGG | + | chr4.2:40613021-40613040 | MS.gene30569:CDS | 50.0% |
! | GAGGATGGCTTGGATTGTTG+AGG | + | chr4.2:40613520-40613539 | MS.gene30569:intron | 50.0% |
! | TCATTGATGGCTGGAAGCAC+AGG | - | chr4.2:40612450-40612469 | None:intergenic | 50.0% |
ACCCGGGAACTTCCCATTCA+CGG | - | chr4.2:40610586-40610605 | None:intergenic | 55.0% | |
ACCGTGAATGGGAAGTTCCC+GGG | + | chr4.2:40610582-40610601 | MS.gene30569:CDS | 55.0% | |
ACTGTTGCTGTGCCTTCTGG+TGG | + | chr4.2:40613005-40613024 | MS.gene30569:CDS | 55.0% | |
CGGTTCCTTGCTGACAATCC+AGG | + | chr4.2:40613041-40613060 | MS.gene30569:CDS | 55.0% | |
GACCTCTCATCCTTCTCCCA+AGG | + | chr4.2:40611151-40611170 | MS.gene30569:CDS | 55.0% | |
GTTGGGGATTGAGGATGGCT+TGG | + | chr4.2:40613510-40613529 | MS.gene30569:intron | 55.0% | |
TGCACAAGCTCTGCAGACAG+GGG | + | chr4.2:40611460-40611479 | MS.gene30569:CDS | 55.0% | |
TGCCTTGGGAGAAGGATGAG+AGG | - | chr4.2:40611156-40611175 | None:intergenic | 55.0% | |
TGCTGTGCCTTCTGGTGGTT+GGG | + | chr4.2:40613010-40613029 | MS.gene30569:CDS | 55.0% | |
TTGCTGTGCCTTCTGGTGGT+TGG | + | chr4.2:40613009-40613028 | MS.gene30569:CDS | 55.0% | |
TTGGGGAGATCCTTAGGAGG+AGG | - | chr4.2:40613575-40613594 | None:intergenic | 55.0% | |
! | CTTCGTAGTGGTTGGTCGGA+TGG | + | chr4.2:40611000-40611019 | MS.gene30569:CDS | 55.0% |
GCACAAGCTCTGCAGACAGG+GGG | + | chr4.2:40611461-40611480 | MS.gene30569:CDS | 60.0% | |
GGGAGATCCTTAGGAGGAGG+AGG | - | chr4.2:40613572-40613591 | None:intergenic | 60.0% | |
CAAGCTCTGCAGACAGGGGG+TGG | + | chr4.2:40611464-40611483 | MS.gene30569:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 40610576 | 40615318 | 40610576 | ID=MS.gene30569 |
chr4.2 | mRNA | 40610576 | 40615318 | 40610576 | ID=MS.gene30569.t1;Parent=MS.gene30569 |
chr4.2 | exon | 40610576 | 40610685 | 40610576 | ID=MS.gene30569.t1.exon1;Parent=MS.gene30569.t1 |
chr4.2 | CDS | 40610576 | 40610685 | 40610576 | ID=cds.MS.gene30569.t1;Parent=MS.gene30569.t1 |
chr4.2 | exon | 40610984 | 40611228 | 40610984 | ID=MS.gene30569.t1.exon2;Parent=MS.gene30569.t1 |
chr4.2 | CDS | 40610984 | 40611228 | 40610984 | ID=cds.MS.gene30569.t1;Parent=MS.gene30569.t1 |
chr4.2 | exon | 40611426 | 40611550 | 40611426 | ID=MS.gene30569.t1.exon3;Parent=MS.gene30569.t1 |
chr4.2 | CDS | 40611426 | 40611550 | 40611426 | ID=cds.MS.gene30569.t1;Parent=MS.gene30569.t1 |
chr4.2 | exon | 40612117 | 40613062 | 40612117 | ID=MS.gene30569.t1.exon4;Parent=MS.gene30569.t1 |
chr4.2 | CDS | 40612117 | 40613062 | 40612117 | ID=cds.MS.gene30569.t1;Parent=MS.gene30569.t1 |
chr4.2 | exon | 40615140 | 40615318 | 40615140 | ID=MS.gene30569.t1.exon5;Parent=MS.gene30569.t1 |
chr4.2 | CDS | 40615140 | 40615318 | 40615140 | ID=cds.MS.gene30569.t1;Parent=MS.gene30569.t1 |
Gene Sequence |
Protein sequence |