AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene022246

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene022246.t1 MTR_3g078730 88.986 572 36 1 1 572 1 545 0.0 1031
MS.gene022246.t1 MTR_3g078740 78.523 596 103 3 1 572 1 595 0.0 974
MS.gene022246.t1 MTR_3g078700 80.035 566 85 2 1 565 1 539 0.0 938
MS.gene022246.t1 MTR_8g091390 51.071 560 256 6 17 569 26 574 0.0 580
MS.gene022246.t1 MTR_5g020620 32.509 566 326 17 1 544 8 539 3.87e-76 252
MS.gene022246.t1 MTR_5g083360 30.903 576 335 18 1 544 1 545 1.52e-71 240
MS.gene022246.t1 MTR_7g062250 32.143 560 309 16 18 540 27 552 1.81e-71 240
MS.gene022246.t1 MTR_7g058690 31.393 567 334 14 7 542 14 556 2.95e-70 237
MS.gene022246.t1 MTR_5g020600 30.810 568 337 17 2 545 10 545 3.32e-69 234
MS.gene022246.t1 MTR_5g069680 33.031 551 318 17 16 545 17 537 4.93e-69 233
MS.gene022246.t1 MTR_7g060460 31.874 571 334 17 2 540 8 555 1.41e-68 232
MS.gene022246.t1 MTR_4g064530 32.027 587 312 25 3 540 11 559 1.12e-67 230
MS.gene022246.t1 MTR_7g458880 30.998 571 333 17 4 540 11 554 1.30e-67 229
MS.gene022246.t1 MTR_3g101635 30.609 575 335 18 1 544 3 544 2.28e-67 229
MS.gene022246.t1 MTR_2g008330 31.349 571 326 19 6 544 21 557 3.03e-67 229
MS.gene022246.t1 MTR_3g462760 32.156 538 324 13 22 544 23 534 7.69e-66 224
MS.gene022246.t1 MTR_5g073210 31.083 563 335 20 4 541 1 535 4.44e-65 223
MS.gene022246.t1 MTR_5g081810 31.509 530 310 15 36 544 10 507 1.02e-64 221
MS.gene022246.t1 MTR_3g101640 31.046 583 329 21 1 544 1 549 1.04e-64 222
MS.gene022246.t1 MTR_4g015120 30.952 546 329 16 19 544 18 535 1.12e-64 221
MS.gene022246.t1 MTR_7g062310 31.469 572 325 17 21 555 43 584 1.66e-63 219
MS.gene022246.t1 MTR_3g071890 30.756 582 329 22 2 552 12 550 2.39e-61 213
MS.gene022246.t1 MTR_4g064530 31.369 577 309 25 3 530 11 549 6.40e-61 211
MS.gene022246.t1 MTR_8g027375 29.891 552 319 21 25 544 34 549 2.80e-57 202
MS.gene022246.t1 MTR_8g479390 29.084 557 329 19 25 565 31 537 1.43e-54 194
MS.gene022246.t1 MTR_7g065980 28.141 597 351 23 7 562 3 562 1.02e-53 192
MS.gene022246.t1 MTR_4g019225 28.187 557 333 19 24 544 25 550 2.39e-52 188
MS.gene022246.t1 MTR_7g065970 27.846 571 328 23 18 544 18 548 6.66e-52 187
MS.gene022246.t1 MTR_5g018270 29.264 557 319 18 25 562 31 531 2.22e-50 182
MS.gene022246.t1 MTR_3g083390 27.273 561 344 17 26 567 26 541 1.24e-49 180
MS.gene022246.t1 MTR_3g083440 27.273 561 344 17 26 567 26 541 1.62e-49 180
MS.gene022246.t1 MTR_3g083450 27.273 561 344 17 26 567 27 542 3.87e-49 179
MS.gene022246.t1 MTR_3g083400 27.273 561 344 17 26 567 26 541 4.99e-49 179
MS.gene022246.t1 MTR_3g079660 77.320 97 22 0 476 572 5 101 1.24e-48 164
MS.gene022246.t1 MTR_3g083430 27.094 561 345 17 26 567 26 541 1.61e-48 177
MS.gene022246.t1 MTR_8g479380 27.860 542 313 20 48 567 52 537 1.81e-48 177
MS.gene022246.t1 MTR_3g083410 27.458 539 327 17 48 567 12 505 8.20e-48 174
MS.gene022246.t1 MTR_4g101650 28.007 557 345 17 27 562 29 550 2.53e-47 174
MS.gene022246.t1 MTR_4g049390 27.907 559 328 16 25 562 27 531 4.66e-47 173
MS.gene022246.t1 MTR_4g083190 25.850 588 370 19 1 567 1 543 7.40e-47 172
MS.gene022246.t1 MTR_3g008580 26.860 551 339 16 37 562 41 552 2.36e-46 172
MS.gene022246.t1 MTR_4g048350 26.978 556 336 15 25 562 27 530 5.56e-46 170
MS.gene022246.t1 MTR_1g090707 26.577 523 301 15 44 539 43 509 4.80e-45 168
MS.gene022246.t1 MTR_4g132320 27.210 577 340 18 14 565 17 538 6.65e-45 167
MS.gene022246.t1 MTR_4g083210 26.984 567 334 19 26 567 26 537 3.18e-44 165
MS.gene022246.t1 MTR_4g075690 26.344 558 337 15 25 562 30 533 4.50e-44 165
MS.gene022246.t1 MTR_2g088080 27.611 565 322 20 25 562 30 534 6.17e-44 164
MS.gene022246.t1 MTR_3g115050 26.056 568 353 16 16 565 19 537 7.64e-44 164
MS.gene022246.t1 MTR_7g051440 27.225 573 350 23 26 573 30 560 8.37e-44 165
MS.gene022246.t1 MTR_1g026410 26.418 564 339 20 25 566 29 538 1.48e-41 157
MS.gene022246.t1 MTR_4g075690 26.115 471 280 13 25 480 30 447 5.22e-34 134
MS.gene022246.t1 MTR_2g088080 27.006 511 287 19 79 562 2 453 5.40e-34 135
MS.gene022246.t1 MTR_2g009230 88.525 61 7 0 130 190 1 61 6.72e-33 121
MS.gene022246.t1 MTR_5g081790 31.461 267 151 10 278 524 166 420 5.63e-19 90.1
MS.gene022246.t1 MTR_5g081790 35.417 144 83 4 6 142 7 147 3.59e-18 87.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene022246.t1 AT5G21105 64.737 570 197 2 9 574 19 588 0.0 794
MS.gene022246.t1 AT5G21105 65.192 520 177 2 9 524 19 538 0.0 723
MS.gene022246.t1 AT5G21100 61.290 558 208 5 17 570 16 569 0.0 717
MS.gene022246.t1 AT4G39830 50.089 563 256 8 19 566 30 582 0.0 578
MS.gene022246.t1 AT5G21105 64.599 387 136 1 189 574 11 397 0.0 539
MS.gene022246.t1 AT4G39830 49.899 495 223 8 87 566 3 487 5.58e-170 491
MS.gene022246.t1 AT4G39830 49.798 494 223 8 88 566 2 485 2.87e-169 489
MS.gene022246.t1 AT4G39830 47.677 495 221 9 87 566 3 474 3.13e-156 456
MS.gene022246.t1 AT5G05390 29.931 578 336 17 1 544 1 543 2.76e-71 239
MS.gene022246.t1 AT5G03260 32.904 544 313 17 22 544 23 535 1.90e-69 234
MS.gene022246.t1 AT5G09360 32.105 570 324 20 2 544 14 547 3.63e-69 234
MS.gene022246.t1 AT5G58910 31.227 554 311 18 24 544 29 545 6.14e-67 228
MS.gene022246.t1 AT5G58910 31.227 554 310 19 24 544 29 544 1.93e-65 224
MS.gene022246.t1 AT2G29130 32.281 570 328 18 1 540 6 547 3.42e-65 223
MS.gene022246.t1 AT5G48100 30.674 564 325 18 14 544 11 541 5.61e-65 222
MS.gene022246.t1 AT2G30210 31.123 543 299 18 40 544 43 548 7.42e-65 222
MS.gene022246.t1 AT5G07130 31.095 566 334 17 10 544 7 547 3.12e-64 220
MS.gene022246.t1 AT3G09220 30.195 563 333 19 12 544 13 545 2.90e-63 218
MS.gene022246.t1 AT5G01050 30.245 572 323 21 11 544 13 546 3.68e-63 218
MS.gene022246.t1 AT2G40370 29.951 611 342 24 1 559 1 577 7.30e-63 217
MS.gene022246.t1 AT5G01040 29.474 570 328 18 11 544 13 544 9.90e-62 214
MS.gene022246.t1 AT1G18140 29.897 582 332 21 20 559 24 571 8.49e-61 211
MS.gene022246.t1 AT2G38080 30.728 563 333 20 8 544 5 536 2.16e-59 207
MS.gene022246.t1 AT5G60020 29.828 580 336 20 1 540 3 551 5.19e-59 206
MS.gene022246.t1 AT2G46570 28.700 554 329 20 22 544 29 547 7.85e-57 200
MS.gene022246.t1 AT5G58910 30.112 538 299 19 40 544 8 501 1.48e-56 199
MS.gene022246.t1 AT5G01190 29.443 557 347 15 7 544 7 536 1.90e-56 199
MS.gene022246.t1 AT5G60020 30.314 541 308 19 40 540 8 519 7.46e-56 197
MS.gene022246.t1 AT5G01190 30.250 519 316 15 45 544 31 522 1.28e-53 191
MS.gene022246.t1 AT5G60020 29.255 564 328 20 1 524 3 535 7.46e-52 186
MS.gene022246.t1 AT1G55570 29.004 562 324 21 26 562 30 541 2.43e-51 185
MS.gene022246.t1 AT1G75790 27.634 579 343 20 12 562 12 542 1.29e-49 180
MS.gene022246.t1 AT4G12420 26.271 590 375 18 1 567 1 553 1.59e-49 181
MS.gene022246.t1 AT4G12420 26.271 590 375 18 1 567 1 553 1.59e-49 181
MS.gene022246.t1 AT4G22010 28.330 533 311 16 25 540 26 504 2.77e-49 179
MS.gene022246.t1 AT5G66920 27.027 518 318 13 25 532 37 504 1.33e-48 177
MS.gene022246.t1 AT1G21860 27.178 574 339 18 16 565 16 534 3.51e-47 173
MS.gene022246.t1 AT3G13390 28.648 562 326 22 26 562 29 540 9.68e-47 172
MS.gene022246.t1 AT1G21850 27.022 581 350 19 4 562 3 531 1.76e-46 172
MS.gene022246.t1 AT5G07130 30.228 483 284 15 91 544 4 462 2.76e-46 170
MS.gene022246.t1 AT5G07130 30.228 483 284 15 91 544 4 462 2.76e-46 170
MS.gene022246.t1 AT4G37160 25.314 557 349 16 27 566 33 539 2.26e-45 168
MS.gene022246.t1 AT4G25240 26.576 587 374 18 2 567 6 556 3.08e-45 169
MS.gene022246.t1 AT4G25240 26.576 587 374 18 2 567 6 556 3.08e-45 169
MS.gene022246.t1 AT5G51480 26.998 563 353 21 27 567 30 556 4.26e-45 168
MS.gene022246.t1 AT2G23630 27.207 555 332 19 27 562 37 538 7.61e-44 164
MS.gene022246.t1 AT2G23630 27.207 555 332 19 27 562 32 533 8.87e-44 164
MS.gene022246.t1 AT5G48450 25.704 568 361 17 20 567 22 548 2.05e-43 164
MS.gene022246.t1 AT5G48450 25.704 568 361 17 20 567 22 548 2.32e-43 164
MS.gene022246.t1 AT4G28090 28.034 585 338 21 9 565 9 538 3.57e-43 162
MS.gene022246.t1 AT2G46570 27.992 493 290 19 83 544 4 462 5.59e-43 160
MS.gene022246.t1 AT3G09220 28.992 476 279 18 99 544 2 448 1.58e-42 159
MS.gene022246.t1 AT1G76160 24.955 561 347 16 25 565 28 534 2.82e-41 157
MS.gene022246.t1 AT1G41830 24.386 529 333 13 25 539 29 504 2.69e-38 148
MS.gene022246.t1 AT3G13400 25.581 559 346 19 26 562 28 538 1.22e-36 144
MS.gene022246.t1 AT3G13400 25.581 559 346 19 26 562 28 538 1.22e-36 144
MS.gene022246.t1 AT4G38420 24.691 567 348 20 25 565 30 543 3.64e-35 139
MS.gene022246.t1 AT1G55560 25.045 555 348 20 29 562 30 537 1.15e-34 138
MS.gene022246.t1 AT4G37160 25.322 466 287 13 27 480 33 449 2.57e-34 135
MS.gene022246.t1 AT4G38420 24.554 505 307 18 25 508 30 481 1.51e-27 116
MS.gene022246.t1 AT4G38420 24.684 474 290 16 25 480 30 454 1.98e-26 112

Find 143 sgRNAs with CRISPR-Local

Find 399 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTGAGGGTGTTCATAAAAT+TGG 0.125745 3.3:+66666108 MS.gene022246:CDS
AAATCGGTAATTTCACTAAA+TGG 0.163317 3.3:+66665605 MS.gene022246:CDS
TTGGACTGCATTAAGGTTTA+AGG 0.221108 3.3:+66666011 MS.gene022246:CDS
TGGCTGTGGTGTTCCCATTC+TGG 0.232383 3.3:-66665536 None:intergenic
CTCAGTTGTGGGTGTTGTTT+AGG 0.244247 3.3:-66666179 None:intergenic
TATTATAGTTAAGGATTGTT+AGG 0.255819 3.3:-66665417 None:intergenic
TTTGTTTGGTATATATGGTT+AGG 0.274547 3.3:+66660437 MS.gene022246:CDS
CTTATGGTTGGACTGCATTA+AGG 0.292432 3.3:+66666004 MS.gene022246:CDS
GCTCCTAAGTAAGGTGTTAT+TGG 0.293518 3.3:-66665655 None:intergenic
ACTGCAGTTATATTTCCTTA+TGG 0.308341 3.3:+66665988 MS.gene022246:CDS
TGGCGCTACTTCGAGAATCT+TGG 0.314451 3.3:-66664567 None:intergenic
AGGCAGACAACCCTGGTGTT+TGG 0.318817 3.3:+66666031 MS.gene022246:CDS
CGATTGAGAGCCAGTAGTTT+TGG 0.320504 3.3:-66665360 None:intergenic
GTGATTGGTGGTGGTAATAT+AGG 0.324364 3.3:-66665460 None:intergenic
GTTGTTGTACTTGGATTAAC+TGG 0.324579 3.3:-66665760 None:intergenic
GGCAGACAACCCTGGTGTTT+GGG 0.333727 3.3:+66666032 MS.gene022246:CDS
CCGTTACCCGTTGTTGTACT+TGG 0.339838 3.3:-66665769 None:intergenic
CAGGGTTTGTATTATAGTTA+AGG 0.342158 3.3:-66665426 None:intergenic
GTTCACCAACCCATCTCATT+GGG 0.342539 3.3:-66662082 None:intergenic
CTGAGGGTGTTCATAAAATT+GGG 0.343862 3.3:+66666109 MS.gene022246:CDS
CACCACCAATCACTCCATTA+TGG 0.348399 3.3:+66665470 MS.gene022246:CDS
AATGGCTCGCTTTGGTTGTT+TGG 0.353112 3.3:-66661975 None:intergenic
CATTGAACCACATTTGCATC+TGG 0.368806 3.3:+66666068 MS.gene022246:CDS
GGAATCAATGGTCAGTTTCC+TGG 0.370438 3.3:+66660554 MS.gene022246:CDS
TTAAATATGTCGAAATCAAA+TGG 0.374923 3.3:-66665733 None:intergenic
TGATTGGTGGTGGTAATATA+GGG 0.386257 3.3:-66665459 None:intergenic
CGCTCGAAATCGTTCCATAA+TGG 0.386483 3.3:-66665484 None:intergenic
TTGTTTGGTATATATGGTTA+GGG 0.388048 3.3:+66660438 MS.gene022246:CDS
TCCTTCTGTAGAGAGCTTGT+TGG 0.390891 3.3:-66660624 None:intergenic
GGCGCTACTTCGAGAATCTT+GGG 0.392401 3.3:-66664566 None:intergenic
AGGTGTTATTGGCAATGTTA+AGG 0.403860 3.3:-66665644 None:intergenic
TATTTGATTGCTCCTAAGTA+AGG 0.405813 3.3:-66665664 None:intergenic
TATTTCTATCATGGACACTA+TGG 0.409360 3.3:+66661906 MS.gene022246:CDS
CTTTGAAATTGCATTGAGGC+AGG 0.417474 3.3:-66664526 None:intergenic
CTCAACACACAAAACAAAAT+CGG 0.420483 3.3:+66665589 MS.gene022246:CDS
AATCGGTAATTTCACTAAAT+GGG 0.420700 3.3:+66665606 MS.gene022246:CDS
TTTGTAGATTGGAACTCCTT+GGG 0.426712 3.3:+66661599 MS.gene022246:intron
CTCTTCAGCCCCAATGAGAT+GGG 0.429001 3.3:+66662073 MS.gene022246:CDS
AAATCAAATGGGAATCTATC+TGG 0.430172 3.3:-66665721 None:intergenic
CTGTAATGAAAAGTTTCTCC+TGG 0.432582 3.3:-66661660 None:intergenic
CATAATGAAATGGCTCGCTT+TGG 0.432881 3.3:-66661983 None:intergenic
AACTCACCATCATAATGAAA+TGG 0.432896 3.3:-66661993 None:intergenic
GGTTCACCAACCCATCTCAT+TGG 0.433465 3.3:-66662083 None:intergenic
ATTTGACACGTGCACCTTTG+AGG 0.440703 3.3:+66665962 MS.gene022246:CDS
AGCGAGCCATTTCATTATGA+TGG 0.443509 3.3:+66661987 MS.gene022246:CDS
CAGAGAGCAGCAGGGTTGTA+TGG 0.444015 3.3:+66661933 MS.gene022246:CDS
GATCTTGGTCCGTGTGTAGA+AGG 0.444511 3.3:-66665333 None:intergenic
CCAACTTCAGCTCTAATAGT+TGG 0.449801 3.3:-66660578 None:intergenic
ATTACAGATTCATTGTTGAC+AGG 0.449902 3.3:+66661676 MS.gene022246:CDS
CAGTTATATTTCCTTATGGT+TGG 0.450961 3.3:+66665992 MS.gene022246:CDS
TCTCTTCAGCCCCAATGAGA+TGG 0.452079 3.3:+66662072 MS.gene022246:CDS
AAACAAATCATTTCCAGAAT+GGG 0.453424 3.3:+66665523 MS.gene022246:CDS
ATTATAGTTAAGGATTGTTA+GGG 0.461154 3.3:-66665416 None:intergenic
ATTGGAACTCCTTGGGCTGA+TGG 0.463869 3.3:+66661606 MS.gene022246:CDS
GGTGTTGTTTAGGAACATCT+TGG 0.466856 3.3:-66666169 None:intergenic
TTAAGGATTGTTAGGGCTTG+TGG 0.473400 3.3:-66665409 None:intergenic
CCTGGTACATATTTCTATCA+TGG 0.478578 3.3:+66661897 MS.gene022246:CDS
AAAACAAATCATTTCCAGAA+TGG 0.478795 3.3:+66665522 MS.gene022246:CDS
CAAAACTACTGGCTCTCAAT+CGG 0.478813 3.3:+66665361 MS.gene022246:CDS
GTTAATCCAAGTACAACAAC+GGG 0.479161 3.3:+66665763 MS.gene022246:CDS
TATGGCATGCAGAGAGCAGC+AGG 0.482439 3.3:+66661924 MS.gene022246:CDS
TCGTTCCATAATGGAGTGAT+TGG 0.484613 3.3:-66665475 None:intergenic
CTTAATGCAGTCCAACCATA+AGG 0.485250 3.3:-66666003 None:intergenic
ACCACATTTGCATCTGGGAA+TGG 0.487721 3.3:+66666074 MS.gene022246:CDS
TAAATATGTCGAAATCAAAT+GGG 0.488708 3.3:-66665732 None:intergenic
TCTATGCTATCAACCGTGAA+TGG 0.489752 3.3:-66665283 None:intergenic
ACAACATGCTCTATGCAATC+TGG 0.490800 3.3:-66660527 None:intergenic
CAACTTCAGCTCTAATAGTT+GGG 0.494195 3.3:-66660577 None:intergenic
AATATAGGGAAAGTTGAGGC+AGG 0.496705 3.3:-66665445 None:intergenic
AGCTTAGCTAGTCTCAGTTG+TGG 0.500207 3.3:-66666191 None:intergenic
AAACTACGTGCACCCATTCA+CGG 0.502338 3.3:+66665270 MS.gene022246:CDS
CAATGAAATGCCCAAACACC+AGG 0.503898 3.3:-66666042 None:intergenic
GTCCTTAGCTTCTCTCAACT+TGG 0.508173 3.3:+66664625 MS.gene022246:CDS
TTGCCAATAACACCTTACTT+AGG 0.510406 3.3:+66665652 MS.gene022246:CDS
GCTTAGCTAGTCTCAGTTGT+GGG 0.510640 3.3:-66666190 None:intergenic
ACTTGCAATCCTAATTCTGT+AGG 0.513702 3.3:-66664597 None:intergenic
CTGTAGAGAGCTTGTTGGTG+AGG 0.522573 3.3:-66660619 None:intergenic
TGTTCACGAAATTAGCTGCT+AGG 0.529978 3.3:-66664499 None:intergenic
CAGAAGGAACTGTTATTCAC+TGG 0.532868 3.3:+66660639 MS.gene022246:CDS
AAGATCCCAACCAAAACTAC+TGG 0.534040 3.3:+66665350 MS.gene022246:CDS
CCACATTTGCATCTGGGAAT+GGG 0.538253 3.3:+66666075 MS.gene022246:CDS
ATTGAACCACATTTGCATCT+GGG 0.538898 3.3:+66666069 MS.gene022246:CDS
CCCATTCCCAGATGCAAATG+TGG 0.540042 3.3:-66666075 None:intergenic
AGCTTGCTCATCAATGGAAG+AGG 0.544734 3.3:+66664461 MS.gene022246:CDS
GGCCAAGTTGAGAGAAGCTA+AGG 0.545213 3.3:-66664627 None:intergenic
TCTCAGTGTGCTATAAATCC+AGG 0.546219 3.3:+66661642 MS.gene022246:CDS
GTTCATCCATGGCATTTGCA+TGG 0.550858 3.3:+66665871 MS.gene022246:CDS
AGGTTTAAGGCAGACAACCC+TGG 0.556431 3.3:+66666024 MS.gene022246:CDS
GGAACTGTTATTCACTGGCA+TGG 0.556886 3.3:+66660644 MS.gene022246:CDS
TCAGCTCTAATAGTTGGGCC+AGG 0.557489 3.3:-66660572 None:intergenic
GTTCACGAAATTAGCTGCTA+GGG 0.560510 3.3:-66664498 None:intergenic
TTACAGATTCATTGTTGACA+GGG 0.563984 3.3:+66661677 MS.gene022246:CDS
TCAGCCCCAATGAGATGGGT+TGG 0.567659 3.3:+66662077 MS.gene022246:CDS
AATGGGAATCTATCTGGTGG+TGG 0.568086 3.3:-66665715 None:intergenic
CCATGATAGAAATATGTACC+AGG 0.570980 3.3:-66661897 None:intergenic
CTATGCTATCAACCGTGAAT+GGG 0.572088 3.3:-66665282 None:intergenic
CCAACTATTAGAGCTGAAGT+TGG 0.572309 3.3:+66660578 MS.gene022246:CDS
CTGCCTCAATGCAATTTCAA+AGG 0.573833 3.3:+66664527 MS.gene022246:CDS
CTTGTTGTGGTGGAAGCAGA+TGG 0.578406 3.3:+66665247 MS.gene022246:CDS
CATGTTGTGATGGGAATCAA+TGG 0.578474 3.3:+66660542 MS.gene022246:CDS
TTACACGTTTCACTTAAATG+AGG 0.579316 3.3:+66665795 MS.gene022246:CDS
TTGCATAGAGCATGTTGTGA+TGG 0.579841 3.3:+66660532 MS.gene022246:CDS
GAAACATTACAAGTTTGATG+TGG 0.579860 3.3:+66660487 MS.gene022246:CDS
CATCTGCTTCCACCACAACA+AGG 0.580093 3.3:-66665246 None:intergenic
ATCTCATTGGGGCTGAAGAG+AGG 0.581211 3.3:-66662070 None:intergenic
CCAAGTACAACAACGGGTAA+CGG 0.582426 3.3:+66665769 MS.gene022246:CDS
ATCTGCTCCTCAGTGATCTG+TGG 0.584818 3.3:+66662018 MS.gene022246:CDS
GAGATGGGTTGGTGAACCAC+AGG 0.584866 3.3:+66662088 MS.gene022246:CDS
ATATAGGGAAAGTTGAGGCA+GGG 0.586056 3.3:-66665444 None:intergenic
ATAACTGCAGTGTTCCTCAA+AGG 0.587942 3.3:-66665976 None:intergenic
TCACTGGCATGGAATCAGAC+AGG 0.589797 3.3:+66660655 MS.gene022246:CDS
CACAAGTTCACAAGAACAAG+AGG 0.595059 3.3:+66662043 MS.gene022246:CDS
TGCATAGAGCATGTTGTGAT+GGG 0.595383 3.3:+66660533 MS.gene022246:CDS
CCACCTTTGAAATTGCATTG+AGG 0.597277 3.3:-66664530 None:intergenic
TTCCATAATGGAGTGATTGG+TGG 0.600293 3.3:-66665472 None:intergenic
ACCAACAAGCTCTCTACAGA+AGG 0.601317 3.3:+66660623 MS.gene022246:CDS
TTTGAAATTGCATTGAGGCA+GGG 0.606053 3.3:-66664525 None:intergenic
CCTCAATGCAATTTCAAAGG+TGG 0.612230 3.3:+66664530 MS.gene022246:CDS
TCATGTCCATGCAAATGCCA+TGG 0.613062 3.3:-66665877 None:intergenic
CCTACACATGCTCTTACTTG+TGG 0.613192 3.3:+66666138 MS.gene022246:CDS
GAATCACACCCTTGTTGTGG+TGG 0.615258 3.3:+66665237 MS.gene022246:intron
TTCACCAACCCATCTCATTG+GGG 0.616416 3.3:-66662081 None:intergenic
CATAATGGAGTGATTGGTGG+TGG 0.617628 3.3:-66665469 None:intergenic
AGTTCACAAGAACAAGAGGT+TGG 0.621180 3.3:+66662047 MS.gene022246:CDS
ATACTAGTGAAGTTCATCCA+TGG 0.627356 3.3:+66665860 MS.gene022246:CDS
CTACTCAGTCCTTCTACACA+CGG 0.628943 3.3:+66665324 MS.gene022246:CDS
AGTTAATCCAAGTACAACAA+CGG 0.640190 3.3:+66665762 MS.gene022246:CDS
GATAGCATAGACATCTACTC+AGG 0.642343 3.3:+66665295 MS.gene022246:CDS
GCTTGCTCATCAATGGAAGA+GGG 0.643075 3.3:+66664462 MS.gene022246:CDS
GCAGCAGTTCCATCAGCCCA+AGG 0.643166 3.3:-66661615 None:intergenic
ATCTGCTTCCACCACAACAA+GGG 0.647563 3.3:-66665245 None:intergenic
GTAGAATCACACCCTTGTTG+TGG 0.648768 3.3:+66665234 MS.gene022246:intron
CGTGTGTAGAAGGACTGAGT+AGG 0.651575 3.3:-66665323 None:intergenic
TCAAATGGGAATCTATCTGG+TGG 0.659562 3.3:-66665718 None:intergenic
TGGTAATATAGGGAAAGTTG+AGG 0.684103 3.3:-66665449 None:intergenic
CCACAAGTAAGAGCATGTGT+AGG 0.697143 3.3:-66666138 None:intergenic
AATGAAATGCCCAAACACCA+GGG 0.701200 3.3:-66666041 None:intergenic
GAAATTGCATTGAGGCAGGG+TGG 0.703546 3.3:-66664522 None:intergenic
ATGGCATGCAGAGAGCAGCA+GGG 0.712589 3.3:+66661925 MS.gene022246:CDS
GTTGGTGAGGTCAATGACAA+CGG 0.719426 3.3:-66660606 None:intergenic
TGTTGAGGAGGTAAATTGTG+CGG 0.723525 3.3:-66665573 None:intergenic
GGTGAAGGGAAATTTCAACC+AGG 0.727102 3.3:+66665919 MS.gene022246:CDS
TTGTGTGCCACAGATCACTG+AGG 0.796939 3.3:-66662025 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACAACAAAAAATGTATA+AGG - chr3.3:66661529-66661548 None:intergenic 15.0%
!! AGTATTATAACAATCTAAAT+TGG - chr3.3:66663641-66663660 None:intergenic 15.0%
!! ATTGTGTATAAAAAAATGTT+TGG + chr3.3:66664866-66664885 MS.gene022246:intron 15.0%
!! CATTACAAAATAATCTTAAA+CGG - chr3.3:66664934-66664953 None:intergenic 15.0%
!! TACTATATATTGAGTATATA+TGG + chr3.3:66662914-66662933 MS.gene022246:intron 15.0%
!! TTTATATTATTAATCTGAAC+TGG + chr3.3:66664155-66664174 MS.gene022246:intron 15.0%
!! TTTCCTTTATTAAAAGTTAA+AGG - chr3.3:66664209-66664228 None:intergenic 15.0%
!!! AATAATAATGTTTTGTAGAT+TGG + chr3.3:66661588-66661607 MS.gene022246:intron 15.0%
!!! ACCAAAAACATTATTTTATA+GGG - chr3.3:66662838-66662857 None:intergenic 15.0%
!!! GTTTAAGATTATTTTGTAAT+GGG + chr3.3:66664933-66664952 MS.gene022246:intron 15.0%
!!! TACATTTTTTGTTGTTTTTT+TGG + chr3.3:66661531-66661550 MS.gene022246:intron 15.0%
!!! TACCAAAAACATTATTTTAT+AGG - chr3.3:66662839-66662858 None:intergenic 15.0%
!!! TATCCTTTAACTTTTAATAA+AGG + chr3.3:66664203-66664222 MS.gene022246:intron 15.0%
!!! TCATTGTTAATAAGTTATTT+TGG + chr3.3:66663443-66663462 MS.gene022246:intron 15.0%
!!! TTTAAGATTATTTTGTAATG+GGG + chr3.3:66664934-66664953 MS.gene022246:intron 15.0%
!! AAAAAAGTCATCATAATGTA+TGG - chr3.3:66664439-66664458 None:intergenic 20.0%
!! AAAAGTTAAAGGATAAACTA+AGG - chr3.3:66664198-66664217 None:intergenic 20.0%
!! AATGCAAATATATATCTAGT+AGG - chr3.3:66664688-66664707 None:intergenic 20.0%
!! ACAATGCATTATTATATGTA+GGG + chr3.3:66663748-66663767 MS.gene022246:intron 20.0%
!! AGGAAATAAAAATGATATCT+AGG + chr3.3:66661052-66661071 MS.gene022246:intron 20.0%
!! AGTATTATAACAAGATAGAT+TGG - chr3.3:66662548-66662567 None:intergenic 20.0%
!! ATATATATGATATTAACGTG+TGG + chr3.3:66661853-66661872 MS.gene022246:intron 20.0%
!! ATCATTCATTCATCAATTAA+CGG + chr3.3:66665189-66665208 MS.gene022246:intron 20.0%
!! ATTATAGTTAAGGATTGTTA+GGG - chr3.3:66665419-66665438 None:intergenic 20.0%
!! CCAAATAAAGTATATATTTG+AGG - chr3.3:66664997-66665016 None:intergenic 20.0%
!! CCATAAGATTAATTTAATCA+TGG + chr3.3:66664335-66664354 MS.gene022246:intron 20.0%
!! CCATGATTAAATTAATCTTA+TGG - chr3.3:66664338-66664357 None:intergenic 20.0%
!! CCTCAAATATATACTTTATT+TGG + chr3.3:66664994-66665013 MS.gene022246:intron 20.0%
!! GAAAAAGAAAATATTACAAG+TGG - chr3.3:66664048-66664067 None:intergenic 20.0%
!! GATTAATTTAATCATGGATA+TGG + chr3.3:66664341-66664360 MS.gene022246:intron 20.0%
!! GGAAATAAAAATGATATCTA+GGG + chr3.3:66661053-66661072 MS.gene022246:intron 20.0%
!! GTAAATATTCATAAAGATGA+GGG + chr3.3:66661029-66661048 MS.gene022246:intron 20.0%
!! TAAATATGTCGAAATCAAAT+GGG - chr3.3:66665735-66665754 None:intergenic 20.0%
!! TAACTTATTAACAATGAGTA+TGG - chr3.3:66663440-66663459 None:intergenic 20.0%
!! TATATATGATATTAACGTGT+GGG + chr3.3:66661854-66661873 MS.gene022246:intron 20.0%
!! TATTATAGTTAAGGATTGTT+AGG - chr3.3:66665420-66665439 None:intergenic 20.0%
!! TGTAAATATTCATAAAGATG+AGG + chr3.3:66661028-66661047 MS.gene022246:intron 20.0%
!! TTAAATATGTCGAAATCAAA+TGG - chr3.3:66665736-66665755 None:intergenic 20.0%
!!! ATGTTTTTGGTACTTTTATT+AGG + chr3.3:66662847-66662866 MS.gene022246:intron 20.0%
!!! CGTTTAAGATTATTTTGTAA+TGG + chr3.3:66664932-66664951 MS.gene022246:intron 20.0%
!!! CTTTGAACTTTTTTAGAAAT+TGG - chr3.3:66661460-66661479 None:intergenic 20.0%
!!! GACTTTTTGTAGTTTTAATT+TGG - chr3.3:66662379-66662398 None:intergenic 20.0%
!!! GTTTGTAAAAAGTTTTCTTA+TGG + chr3.3:66661355-66661374 MS.gene022246:intron 20.0%
!!! TCCCTATAAAATAATGTTTT+TGG + chr3.3:66662834-66662853 MS.gene022246:intron 20.0%
!!! TGTTTTTGGTACTTTTATTA+GGG + chr3.3:66662848-66662867 MS.gene022246:intron 20.0%
!!! TTTTTTGTTGTTTTTTTGGT+AGG + chr3.3:66661535-66661554 MS.gene022246:intron 20.0%
! AAAACAAATCATTTCCAGAA+TGG + chr3.3:66665522-66665541 MS.gene022246:CDS 25.0%
! AAACAAATCATTTCCAGAAT+GGG + chr3.3:66665523-66665542 MS.gene022246:CDS 25.0%
! AAAGAAAATATTACAAGTGG+AGG - chr3.3:66664045-66664064 None:intergenic 25.0%
! AAATCGGTAATTTCACTAAA+TGG + chr3.3:66665605-66665624 MS.gene022246:CDS 25.0%
! AAATTACAAAACGTTTAGAG+AGG - chr3.3:66662796-66662815 None:intergenic 25.0%
! AATCGGTAATTTCACTAAAT+GGG + chr3.3:66665606-66665625 MS.gene022246:CDS 25.0%
! AGATCAAAAACTTACTGAAA+TGG - chr3.3:66664651-66664670 None:intergenic 25.0%
! CAAAAAAAACCTACAGAATT+AGG + chr3.3:66664588-66664607 MS.gene022246:CDS 25.0%
! CAATGCATTATTATATGTAG+GGG + chr3.3:66663749-66663768 MS.gene022246:intron 25.0%
! CAATTAACATTGTACCAAAA+AGG + chr3.3:66663699-66663718 MS.gene022246:intron 25.0%
! GACAATGCATTATTATATGT+AGG + chr3.3:66663747-66663766 MS.gene022246:intron 25.0%
! GGAAAAAAATGTCATTCATA+AGG - chr3.3:66664409-66664428 None:intergenic 25.0%
! TCTACATGACACAAAAATTA+TGG - chr3.3:66665219-66665238 None:intergenic 25.0%
! TTCATCGATAAAATCAGTTT+AGG - chr3.3:66665141-66665160 None:intergenic 25.0%
! TTGTTTGGTATATATGGTTA+GGG + chr3.3:66660438-66660457 MS.gene022246:CDS 25.0%
! TTTAGAAATTGGTCATAGAT+TGG - chr3.3:66661449-66661468 None:intergenic 25.0%
! TTTGTTTGGTATATATGGTT+AGG + chr3.3:66660437-66660456 MS.gene022246:CDS 25.0%
!! GAAAAAAGACAATGTTGTTT+AGG - chr3.3:66664369-66664388 None:intergenic 25.0%
!! GATTTAAAGCAAAGCATTAT+TGG - chr3.3:66663619-66663638 None:intergenic 25.0%
!!! AATGAGATAGTGATTTTTAG+AGG - chr3.3:66663962-66663981 None:intergenic 25.0%
!!! AATGTGTTATTTTTTTGGTC+AGG - chr3.3:66663840-66663859 None:intergenic 25.0%
!!! ACTCACTTTAAGATTCAATT+TGG - chr3.3:66663998-66664017 None:intergenic 25.0%
!!! AGTTTTAATTTGGATCGATT+TGG - chr3.3:66662369-66662388 None:intergenic 25.0%
!!! ATAAGTTATTTTGGTCCATA+TGG + chr3.3:66663452-66663471 MS.gene022246:intron 25.0%
!!! ATGTTTTAGATGGTATCAAT+TGG + chr3.3:66663043-66663062 MS.gene022246:intron 25.0%
!!! CATTTTTTTATACACAATCG+AGG - chr3.3:66664864-66664883 None:intergenic 25.0%
!!! CTAATTCTGTAGGTTTTTTT+TGG - chr3.3:66664590-66664609 None:intergenic 25.0%
!!! CTGTTTTTGTTTGGTATATA+TGG + chr3.3:66660432-66660451 MS.gene022246:CDS 25.0%
!!! GGTACAATGTGTTATTTTTT+TGG - chr3.3:66663845-66663864 None:intergenic 25.0%
!!! GTTAATCGCATACTTTTTTT+TGG - chr3.3:66663866-66663885 None:intergenic 25.0%
!!! TGTTAAAAGCTGTTTTTGTT+TGG + chr3.3:66660423-66660442 MS.gene022246:CDS 25.0%
AAAACTCCCAAACAAAGATT+GGG - chr3.3:66662440-66662459 None:intergenic 30.0%
AAAGAATGGAGAACTTTAGA+GGG + chr3.3:66662497-66662516 MS.gene022246:intron 30.0%
AAAGTCATCATAATGTATGG+TGG - chr3.3:66664436-66664455 None:intergenic 30.0%
AAATCAAATGGGAATCTATC+TGG - chr3.3:66665724-66665743 None:intergenic 30.0%
AACAAAAGAAAAACCATTGC+TGG - chr3.3:66661780-66661799 None:intergenic 30.0%
AACATATCACTAAGGAAACT+AGG - chr3.3:66663028-66663047 None:intergenic 30.0%
AACTCACCATCATAATGAAA+TGG - chr3.3:66661996-66662015 None:intergenic 30.0%
AAGTCATCATAATGTATGGT+GGG - chr3.3:66664435-66664454 None:intergenic 30.0%
AATATTCATAAAGATGAGGG+AGG + chr3.3:66661032-66661051 MS.gene022246:intron 30.0%
ACATATCACTAAGGAAACTA+GGG - chr3.3:66663027-66663046 None:intergenic 30.0%
ACCTTATAAGGTGAATAAGT+GGG - chr3.3:66663797-66663816 None:intergenic 30.0%
ACTGCAGTTATATTTCCTTA+TGG + chr3.3:66665988-66666007 MS.gene022246:CDS 30.0%
AGTTAATCCAAGTACAACAA+CGG + chr3.3:66665762-66665781 MS.gene022246:CDS 30.0%
ATATATGGTCTCAATAGACA+GGG + chr3.3:66662929-66662948 MS.gene022246:intron 30.0%
ATCTCATCTGGATTATTCAA+AGG + chr3.3:66663487-66663506 MS.gene022246:intron 30.0%
ATGATCAATAAAAACGTGCA+AGG - chr3.3:66662723-66662742 None:intergenic 30.0%
ATTAACAATGAGTATGGAGT+GGG - chr3.3:66663434-66663453 None:intergenic 30.0%
ATTACAGATTCATTGTTGAC+AGG + chr3.3:66661676-66661695 MS.gene022246:CDS 30.0%
ATTCAATTTGGAAGCTTAGA+GGG - chr3.3:66663986-66664005 None:intergenic 30.0%
CAGGGTTTGTATTATAGTTA+AGG - chr3.3:66665429-66665448 None:intergenic 30.0%
CAGTTATATTTCCTTATGGT+TGG + chr3.3:66665992-66666011 MS.gene022246:CDS 30.0%
CTCAACACACAAAACAAAAT+CGG + chr3.3:66665589-66665608 MS.gene022246:CDS 30.0%
GAAACATTACAAGTTTGATG+TGG + chr3.3:66660487-66660506 MS.gene022246:CDS 30.0%
GAAGCAAGAATCATAAAGAA+TGG + chr3.3:66662483-66662502 MS.gene022246:intron 30.0%
GAGTAATATGGATATGTAGA+AGG - chr3.3:66663109-66663128 None:intergenic 30.0%
GTAGAAGGAAAATCAGTTAT+GGG - chr3.3:66663094-66663113 None:intergenic 30.0%
GTGCTAAGGTTGAATAATAT+GGG - chr3.3:66663232-66663251 None:intergenic 30.0%
TAAAGAATGGAGAACTTTAG+AGG + chr3.3:66662496-66662515 MS.gene022246:intron 30.0%
TACCTTATAAGGTGAATAAG+TGG - chr3.3:66663798-66663817 None:intergenic 30.0%
TATATATGGTCTCAATAGAC+AGG + chr3.3:66662928-66662947 MS.gene022246:intron 30.0%
TATTAACAATGAGTATGGAG+TGG - chr3.3:66663435-66663454 None:intergenic 30.0%
TATTTGATTGCTCCTAAGTA+AGG - chr3.3:66665667-66665686 None:intergenic 30.0%
TGAAAGAAGTTGAATAGGAA+GGG - chr3.3:66663372-66663391 None:intergenic 30.0%
TGGCTAGAATTTACCTTATA+AGG - chr3.3:66663809-66663828 None:intergenic 30.0%
TGTAGAAGGAAAATCAGTTA+TGG - chr3.3:66663095-66663114 None:intergenic 30.0%
TTACACGTTTCACTTAAATG+AGG + chr3.3:66665795-66665814 MS.gene022246:CDS 30.0%
TTACAGATTCATTGTTGACA+GGG + chr3.3:66661677-66661696 MS.gene022246:CDS 30.0%
TTGAAAGAAGTTGAATAGGA+AGG - chr3.3:66663373-66663392 None:intergenic 30.0%
TTGCTCATAATAGTAACAGA+CGG + chr3.3:66660771-66660790 MS.gene022246:intron 30.0%
TTGGGTTTCCATAAATGTAT+TGG - chr3.3:66663310-66663329 None:intergenic 30.0%
! AAAAGTTGAAAGTATACCTG+TGG - chr3.3:66662107-66662126 None:intergenic 30.0%
! AAGATGGACCAATTTTTGTT+TGG + chr3.3:66661195-66661214 MS.gene022246:intron 30.0%
! AAGGTAATTATGAAGGGTAT+GGG - chr3.3:66663280-66663299 None:intergenic 30.0%
! ATCACTTATTTGAGATCAAG+TGG + chr3.3:66661739-66661758 MS.gene022246:intron 30.0%
! ATTTGCATGGACATGATTTT+TGG + chr3.3:66665884-66665903 MS.gene022246:CDS 30.0%
! CCATCTAAAACATATCACTA+AGG - chr3.3:66663036-66663055 None:intergenic 30.0%
! GATTGTTGTTGAAAACCATA+TGG - chr3.3:66663470-66663489 None:intergenic 30.0%
! GTTTCCATAAATGTATTGGT+TGG - chr3.3:66663306-66663325 None:intergenic 30.0%
! TATTTCTATCATGGACACTA+TGG + chr3.3:66661906-66661925 MS.gene022246:CDS 30.0%
! TCATTGTATTTGATGGTTGA+CGG + chr3.3:66660831-66660850 MS.gene022246:intron 30.0%
! TTTGCATGGACATGATTTTT+GGG + chr3.3:66665885-66665904 MS.gene022246:CDS 30.0%
! TTTTCAACAACAATCTCATC+TGG + chr3.3:66663475-66663494 MS.gene022246:intron 30.0%
! TTTTTATCACTTTGTGTGCA+TGG - chr3.3:66661239-66661258 None:intergenic 30.0%
!! AAGATTATTTTGTAATGGGG+AGG + chr3.3:66664937-66664956 MS.gene022246:intron 30.0%
!! AGATGGACCAATTTTTGTTT+GGG + chr3.3:66661196-66661215 MS.gene022246:intron 30.0%
!! CCTTAGTGATATGTTTTAGA+TGG + chr3.3:66663033-66663052 MS.gene022246:intron 30.0%
AAGGAAAATCAGTTATGGGA+GGG - chr3.3:66663090-66663109 None:intergenic 35.0%
ACTTGCAATCCTAATTCTGT+AGG - chr3.3:66664600-66664619 None:intergenic 35.0%
AGGGTAGAGCTTGTAAAAAA+AGG + chr3.3:66662461-66662480 MS.gene022246:intron 35.0%
ATAAAGCGGATATAGGTATG+AGG - chr3.3:66663544-66663563 None:intergenic 35.0%
ATACTAGTGAAGTTCATCCA+TGG + chr3.3:66665860-66665879 MS.gene022246:CDS 35.0%
ATCTCTCTTTCTTGTGTAGT+AGG + chr3.3:66664716-66664735 MS.gene022246:intron 35.0%
ATGGTTAAGTGAGTAGAGAT+TGG + chr3.3:66661374-66661393 MS.gene022246:intron 35.0%
ATTGAACCACATTTGCATCT+GGG + chr3.3:66666069-66666088 MS.gene022246:CDS 35.0%
ATTGTGAGGATCGAGTAATA+TGG - chr3.3:66663121-66663140 None:intergenic 35.0%
CAAAACTCCCAAACAAAGAT+TGG - chr3.3:66662441-66662460 None:intergenic 35.0%
CCATGATAGAAATATGTACC+AGG - chr3.3:66661900-66661919 None:intergenic 35.0%
CCTTATAAGGTGAATAAGTG+GGG - chr3.3:66663796-66663815 None:intergenic 35.0%
CTGTAATGAAAAGTTTCTCC+TGG - chr3.3:66661663-66661682 None:intergenic 35.0%
GAAAATATTACAAGTGGAGG+TGG - chr3.3:66664042-66664061 None:intergenic 35.0%
GAAGGTAATTATGAAGGGTA+TGG - chr3.3:66663281-66663300 None:intergenic 35.0%
GATTCAATTTGGAAGCTTAG+AGG - chr3.3:66663987-66664006 None:intergenic 35.0%
GCAAGGAAAACATGACTAAT+AGG + chr3.3:66664794-66664813 MS.gene022246:intron 35.0%
GCACACAAAGTGATAAAAAG+AGG + chr3.3:66661240-66661259 MS.gene022246:intron 35.0%
GGTGCTAAGGTTGAATAATA+TGG - chr3.3:66663233-66663252 None:intergenic 35.0%
GTGCTCTTCATTGTATTTGA+TGG + chr3.3:66660824-66660843 MS.gene022246:intron 35.0%
GTGTTCAAGATTATGTCACA+TGG + chr3.3:66662870-66662889 MS.gene022246:intron 35.0%
GTTAATCCAAGTACAACAAC+GGG + chr3.3:66665763-66665782 MS.gene022246:CDS 35.0%
GTTGTTGTACTTGGATTAAC+TGG - chr3.3:66665763-66665782 None:intergenic 35.0%
TAAAGCGGATATAGGTATGA+GGG - chr3.3:66663543-66663562 None:intergenic 35.0%
TAGCAAACCCAATCTTTGTT+TGG + chr3.3:66662430-66662449 MS.gene022246:intron 35.0%
TCCTCCAACCAATACATTTA+TGG + chr3.3:66663299-66663318 MS.gene022246:intron 35.0%
TCTAAGAGCAAAAGGAGAAA+AGG - chr3.3:66663003-66663022 None:intergenic 35.0%
TCTTGTGTAGTAGGTATGAA+AGG + chr3.3:66664725-66664744 MS.gene022246:intron 35.0%
TCTTTCAACCCATACAATCA+TGG + chr3.3:66663385-66663404 MS.gene022246:intron 35.0%
TGGAGGAAGGTAATTATGAA+GGG - chr3.3:66663286-66663305 None:intergenic 35.0%
TGGTAATATAGGGAAAGTTG+AGG - chr3.3:66665452-66665471 None:intergenic 35.0%
TGGTTAAGTGAGTAGAGATT+GGG + chr3.3:66661375-66661394 MS.gene022246:intron 35.0%
TGTTCTGCCCAAACAAAAAT+TGG - chr3.3:66661206-66661225 None:intergenic 35.0%
TTAGAAAGCGAAGCATAAAG+CGG - chr3.3:66663558-66663577 None:intergenic 35.0%
TTGCCAATAACACCTTACTT+AGG + chr3.3:66665652-66665671 MS.gene022246:CDS 35.0%
TTGGACTGCATTAAGGTTTA+AGG + chr3.3:66666011-66666030 MS.gene022246:CDS 35.0%
TTGGAGGAAGGTAATTATGA+AGG - chr3.3:66663287-66663306 None:intergenic 35.0%
TTGGTAGATGTGCAAATCTA+TGG + chr3.3:66664885-66664904 MS.gene022246:intron 35.0%
TTTGTAGATTGGAACTCCTT+GGG + chr3.3:66661599-66661618 MS.gene022246:intron 35.0%
! AAACTTTTCTGATGAACACC+TGG - chr3.3:66665940-66665959 None:intergenic 35.0%
! AGCAAACCCAATCTTTGTTT+GGG + chr3.3:66662431-66662450 MS.gene022246:intron 35.0%
! CAACTTCAGCTCTAATAGTT+GGG - chr3.3:66660580-66660599 None:intergenic 35.0%
! CCTGGTACATATTTCTATCA+TGG + chr3.3:66661897-66661916 MS.gene022246:CDS 35.0%
! GAATAGGAAGGGTATAGTAA+AGG - chr3.3:66663361-66663380 None:intergenic 35.0%
! TGGGTTGAAAGAAGTTGAAT+AGG - chr3.3:66663377-66663396 None:intergenic 35.0%
! TTTGAAATTGCATTGAGGCA+GGG - chr3.3:66664528-66664547 None:intergenic 35.0%
! TTTTGTAGATTGGAACTCCT+TGG + chr3.3:66661598-66661617 MS.gene022246:intron 35.0%
!! AGGTGTTATTGGCAATGTTA+AGG - chr3.3:66665647-66665666 None:intergenic 35.0%
!! ATCATAATGTATGGTGGGTT+AGG - chr3.3:66664430-66664449 None:intergenic 35.0%
!! ATCTTTGTTTGGGAGTTTTG+AGG + chr3.3:66662441-66662460 MS.gene022246:intron 35.0%
!! ATTCAAAGGCACTCTCATAT+GGG + chr3.3:66663501-66663520 MS.gene022246:intron 35.0%
!! CAAAGATTGGGTTTGCTATA+AGG - chr3.3:66662428-66662447 None:intergenic 35.0%
!! CTGAGGGTGTTCATAAAATT+GGG + chr3.3:66666109-66666128 MS.gene022246:CDS 35.0%
!! TAAAAGTGTTTCTGGCTTTG+AGG + chr3.3:66663575-66663594 MS.gene022246:intron 35.0%
!! TAAATGTATTGGTTGGAGGA+AGG - chr3.3:66663299-66663318 None:intergenic 35.0%
!! TATTCAAAGGCACTCTCATA+TGG + chr3.3:66663500-66663519 MS.gene022246:intron 35.0%
!! TCCATAAATGTATTGGTTGG+AGG - chr3.3:66663303-66663322 None:intergenic 35.0%
!! TCGCTTTCTAAAAGTGTTTC+TGG + chr3.3:66663567-66663586 MS.gene022246:intron 35.0%
!! TCTTTGTTTGGGAGTTTTGA+GGG + chr3.3:66662442-66662461 MS.gene022246:intron 35.0%
!! TGATTGGTGGTGGTAATATA+GGG - chr3.3:66665462-66665481 None:intergenic 35.0%
!! TTTTTGGTCAGGTAGCTTAA+TGG - chr3.3:66663829-66663848 None:intergenic 35.0%
!!! AATGGGTGTTATTTTTGCTG+AGG + chr3.3:66666092-66666111 MS.gene022246:CDS 35.0%
!!! ATGGGTGTTATTTTTGCTGA+GGG + chr3.3:66666093-66666112 MS.gene022246:CDS 35.0%
!!! CGATTTTGTTTTGTGTGTTG+AGG - chr3.3:66665591-66665610 None:intergenic 35.0%
!!! GATTTTTGGGTTTTGGGATA+TGG + chr3.3:66665898-66665917 MS.gene022246:CDS 35.0%
!!! GGACATGATTTTTGGGTTTT+GGG + chr3.3:66665892-66665911 MS.gene022246:CDS 35.0%
!!! TGGACATGATTTTTGGGTTT+TGG + chr3.3:66665891-66665910 MS.gene022246:CDS 35.0%
!!! TTTTAGAGCTTGCTCATCAA+TGG + chr3.3:66664455-66664474 MS.gene022246:intron 35.0%
!!! TTTTGTTTTGTGTGTTGAGG+AGG - chr3.3:66665588-66665607 None:intergenic 35.0%
AAAGCGGATATAGGTATGAG+GGG - chr3.3:66663542-66663561 None:intergenic 40.0%
AAGATCCCAACCAAAACTAC+TGG + chr3.3:66665350-66665369 MS.gene022246:CDS 40.0%
AATATAGGGAAAGTTGAGGC+AGG - chr3.3:66665448-66665467 None:intergenic 40.0%
AATATGGTGTGTGTGTGGAT+TGG - chr3.3:66663172-66663191 None:intergenic 40.0%
AATGAAATGCCCAAACACCA+GGG - chr3.3:66666044-66666063 None:intergenic 40.0%
ACAACATGCTCTATGCAATC+TGG - chr3.3:66660530-66660549 None:intergenic 40.0%
AGACTGTAGCCATGATTGTA+TGG - chr3.3:66663397-66663416 None:intergenic 40.0%
AGCGAGCCATTTCATTATGA+TGG + chr3.3:66661987-66662006 MS.gene022246:CDS 40.0%
AGGAGAGGTAAAGACCATAT+GGG + chr3.3:66661114-66661133 MS.gene022246:intron 40.0%
AGTAAAGGGTTAAGGGAGAA+AGG + chr3.3:66661145-66661164 MS.gene022246:intron 40.0%
AGTTCACAAGAACAAGAGGT+TGG + chr3.3:66662047-66662066 MS.gene022246:CDS 40.0%
ATAACTGCAGTGTTCCTCAA+AGG - chr3.3:66665979-66665998 None:intergenic 40.0%
ATATAGGGAAAGTTGAGGCA+GGG - chr3.3:66665447-66665466 None:intergenic 40.0%
ATATGGGTGAGAGAGAGTAA+AGG + chr3.3:66661130-66661149 MS.gene022246:intron 40.0%
ATATGGTGTGTGTGTGGATT+GGG - chr3.3:66663171-66663190 None:intergenic 40.0%
ATTATTATATGTAGGGGCCG+GGG + chr3.3:66663755-66663774 MS.gene022246:intron 40.0%
ATTATTCCATTCGCATCGCA+AGG + chr3.3:66664777-66664796 MS.gene022246:intron 40.0%
CACAAGTTCACAAGAACAAG+AGG + chr3.3:66662043-66662062 MS.gene022246:CDS 40.0%
CAGAAGGAACTGTTATTCAC+TGG + chr3.3:66660639-66660658 MS.gene022246:CDS 40.0%
CATAATGAAATGGCTCGCTT+TGG - chr3.3:66661986-66662005 None:intergenic 40.0%
CATTATTATATGTAGGGGCC+GGG + chr3.3:66663754-66663773 MS.gene022246:intron 40.0%
CATTGAACCACATTTGCATC+TGG + chr3.3:66666068-66666087 MS.gene022246:CDS 40.0%
CCAACTATTAGAGCTGAAGT+TGG + chr3.3:66660578-66660597 MS.gene022246:CDS 40.0%
CCCCACTTATTCACCTTATA+AGG + chr3.3:66663793-66663812 MS.gene022246:intron 40.0%
CCTCAATGCAATTTCAAAGG+TGG + chr3.3:66664530-66664549 MS.gene022246:CDS 40.0%
CGTGTGGGTGTTTAATCATA+TGG + chr3.3:66661869-66661888 MS.gene022246:intron 40.0%
CTATGCTATCAACCGTGAAT+GGG - chr3.3:66665285-66665304 None:intergenic 40.0%
CTGCCTCAATGCAATTTCAA+AGG + chr3.3:66664527-66664546 MS.gene022246:CDS 40.0%
CTTAATGCAGTCCAACCATA+AGG - chr3.3:66666006-66666025 None:intergenic 40.0%
CTTATGGTTGGACTGCATTA+AGG + chr3.3:66666004-66666023 MS.gene022246:CDS 40.0%
GAAGGAAAATCAGTTATGGG+AGG - chr3.3:66663091-66663110 None:intergenic 40.0%
GAATGGAGCTATAATACTGG+TGG - chr3.3:66663148-66663167 None:intergenic 40.0%
GACTGTAGCCATGATTGTAT+GGG - chr3.3:66663396-66663415 None:intergenic 40.0%
GAGAGAGAGTAAAGGGTTAA+GGG + chr3.3:66661138-66661157 MS.gene022246:intron 40.0%
GATAGCATAGACATCTACTC+AGG + chr3.3:66665295-66665314 MS.gene022246:CDS 40.0%
GCATTATTATATGTAGGGGC+CGG + chr3.3:66663753-66663772 MS.gene022246:intron 40.0%
GGAGGAGATTAAGTGGAATA+TGG - chr3.3:66663188-66663207 None:intergenic 40.0%
GGTTGAATAATATGGGTGAG+AGG - chr3.3:66663225-66663244 None:intergenic 40.0%
GTAGAGCTGAAATGGTGTTT+GGG - chr3.3:66663328-66663347 None:intergenic 40.0%
GTATAGTAAAGGTTGGGTGA+TGG - chr3.3:66663350-66663369 None:intergenic 40.0%
GTTCACGAAATTAGCTGCTA+GGG - chr3.3:66664501-66664520 None:intergenic 40.0%
TATGGGTGAGAGAGAGTAAA+GGG + chr3.3:66661131-66661150 MS.gene022246:intron 40.0%
TCAAATGGGAATCTATCTGG+TGG - chr3.3:66665721-66665740 None:intergenic 40.0%
TCTATGCTATCAACCGTGAA+TGG - chr3.3:66665286-66665305 None:intergenic 40.0%
TCTCAGTGTGCTATAAATCC+AGG + chr3.3:66661642-66661661 MS.gene022246:CDS 40.0%
TGAATAATATGGGTGAGAGG+TGG - chr3.3:66663222-66663241 None:intergenic 40.0%
TGAGAGAGAGTAAAGGGTTA+AGG + chr3.3:66661137-66661156 MS.gene022246:intron 40.0%
TGCATAGAGCATGTTGTGAT+GGG + chr3.3:66660533-66660552 MS.gene022246:CDS 40.0%
TGTTCACGAAATTAGCTGCT+AGG - chr3.3:66664502-66664521 None:intergenic 40.0%
TGTTGAGGAGGTAAATTGTG+CGG - chr3.3:66665576-66665595 None:intergenic 40.0%
TTAAGGATTGTTAGGGCTTG+TGG - chr3.3:66665412-66665431 None:intergenic 40.0%
TTGCATAGAGCATGTTGTGA+TGG + chr3.3:66660532-66660551 MS.gene022246:CDS 40.0%
TTTAATCATATGGTGCAGCC+TGG + chr3.3:66661879-66661898 MS.gene022246:intron 40.0%
TTTACTCTCTCTCACCCATA+TGG - chr3.3:66661131-66661150 None:intergenic 40.0%
! AATGGAGAACTTTAGAGGGT+TGG + chr3.3:66662501-66662520 MS.gene022246:intron 40.0%
! AGGAAGGGTATAGTAAAGGT+TGG - chr3.3:66663357-66663376 None:intergenic 40.0%
! ATGGAGAACTTTAGAGGGTT+GGG + chr3.3:66662502-66662521 MS.gene022246:intron 40.0%
! CATGTTGTGATGGGAATCAA+TGG + chr3.3:66660542-66660561 MS.gene022246:CDS 40.0%
! CCAACTTCAGCTCTAATAGT+TGG - chr3.3:66660581-66660600 None:intergenic 40.0%
! GCTCCTAAGTAAGGTGTTAT+TGG - chr3.3:66665658-66665677 None:intergenic 40.0%
! GGAAGGGTATAGTAAAGGTT+GGG - chr3.3:66663356-66663375 None:intergenic 40.0%
! TATTTGATGGTTGACGGACA+AGG + chr3.3:66660837-66660856 MS.gene022246:intron 40.0%
! TCGTTCCATAATGGAGTGAT+TGG - chr3.3:66665478-66665497 None:intergenic 40.0%
! TTCCATAATGGAGTGATTGG+TGG - chr3.3:66665475-66665494 None:intergenic 40.0%
!! ACTAGGGTTCTAAGAGCAAA+AGG - chr3.3:66663011-66663030 None:intergenic 40.0%
!! CAAAACTACTGGCTCTCAAT+CGG + chr3.3:66665361-66665380 MS.gene022246:CDS 40.0%
!! CCACCTTTGAAATTGCATTG+AGG - chr3.3:66664533-66664552 None:intergenic 40.0%
!! CTTTGAAATTGCATTGAGGC+AGG - chr3.3:66664529-66664548 None:intergenic 40.0%
!! GCTGAGGGTGTTCATAAAAT+TGG + chr3.3:66666108-66666127 MS.gene022246:CDS 40.0%
!! GGTGTTGTTTAGGAACATCT+TGG - chr3.3:66666172-66666191 None:intergenic 40.0%
!! GTGATTGGTGGTGGTAATAT+AGG - chr3.3:66665463-66665482 None:intergenic 40.0%
!! TATTTTGTAATGGGGAGGCT+TGG + chr3.3:66664942-66664961 MS.gene022246:intron 40.0%
!!! AGTAGTTTTGGTTGGGATCT+TGG - chr3.3:66665351-66665370 None:intergenic 40.0%
AAACTACGTGCACCCATTCA+CGG + chr3.3:66665270-66665289 MS.gene022246:CDS 45.0%
AAGAAAAACCATTGCTGGCC+TGG - chr3.3:66661775-66661794 None:intergenic 45.0%
AATGGCTCGCTTTGGTTGTT+TGG - chr3.3:66661978-66661997 None:intergenic 45.0%
AATGGGAATCTATCTGGTGG+TGG - chr3.3:66665718-66665737 None:intergenic 45.0%
ACCAACAAGCTCTCTACAGA+AGG + chr3.3:66660623-66660642 MS.gene022246:CDS 45.0%
ACCACATTTGCATCTGGGAA+TGG + chr3.3:66666074-66666093 MS.gene022246:CDS 45.0%
AGAGAGACAGGGAGTAAAGA+TGG + chr3.3:66661179-66661198 MS.gene022246:intron 45.0%
AGTGGAATATGGTGTGTGTG+TGG - chr3.3:66663177-66663196 None:intergenic 45.0%
ATACTGGTGGTTGCATTGTG+AGG - chr3.3:66663135-66663154 None:intergenic 45.0%
ATCTGCTTCCACCACAACAA+GGG - chr3.3:66665248-66665267 None:intergenic 45.0%
ATTACAAGTGGAGGTGGTTG+TGG - chr3.3:66664036-66664055 None:intergenic 45.0%
ATTTGACACGTGCACCTTTG+AGG + chr3.3:66665962-66665981 MS.gene022246:CDS 45.0%
CAATGAAATGCCCAAACACC+AGG - chr3.3:66666045-66666064 None:intergenic 45.0%
CACCACCAATCACTCCATTA+TGG + chr3.3:66665470-66665489 MS.gene022246:CDS 45.0%
CCAAGTACAACAACGGGTAA+CGG + chr3.3:66665769-66665788 MS.gene022246:CDS 45.0%
CCACATTTGCATCTGGGAAT+GGG + chr3.3:66666075-66666094 MS.gene022246:CDS 45.0%
CCTACACATGCTCTTACTTG+TGG + chr3.3:66666138-66666157 MS.gene022246:CDS 45.0%
CGCTCGAAATCGTTCCATAA+TGG - chr3.3:66665487-66665506 None:intergenic 45.0%
CTACCAACTAGCTATGCTCA+CGG - chr3.3:66663727-66663746 None:intergenic 45.0%
CTACTCAGTCCTTCTACACA+CGG + chr3.3:66665324-66665343 MS.gene022246:CDS 45.0%
GAGAGAGATCGAAGATGAGT+AGG + chr3.3:66661075-66661094 MS.gene022246:intron 45.0%
GAGGAGAGGTAAAGACCATA+TGG + chr3.3:66661113-66661132 MS.gene022246:intron 45.0%
GCGAAGCATAAAGCGGATAT+AGG - chr3.3:66663551-66663570 None:intergenic 45.0%
GCTTGCTCATCAATGGAAGA+GGG + chr3.3:66664462-66664481 MS.gene022246:CDS 45.0%
GGAACTGTTATTCACTGGCA+TGG + chr3.3:66660644-66660663 MS.gene022246:CDS 45.0%
GGAATCAATGGTCAGTTTCC+TGG + chr3.3:66660554-66660573 MS.gene022246:CDS 45.0%
GGGGAATGGAGCTATAATAC+TGG - chr3.3:66663151-66663170 None:intergenic 45.0%
GGTAGAGCTGAAATGGTGTT+TGG - chr3.3:66663329-66663348 None:intergenic 45.0%
GGTGAAGGGAAATTTCAACC+AGG + chr3.3:66665919-66665938 MS.gene022246:CDS 45.0%
GTAGAATCACACCCTTGTTG+TGG + chr3.3:66665234-66665253 MS.gene022246:intron 45.0%
GTCCTTAGCTTCTCTCAACT+TGG + chr3.3:66664625-66664644 MS.gene022246:CDS 45.0%
GTTCACCAACCCATCTCATT+GGG - chr3.3:66662085-66662104 None:intergenic 45.0%
GTTCATCCATGGCATTTGCA+TGG + chr3.3:66665871-66665890 MS.gene022246:CDS 45.0%
TACCAACTAGCTATGCTCAC+GGG - chr3.3:66663726-66663745 None:intergenic 45.0%
TCAAGTGGCATATATCTCCC+AGG + chr3.3:66661754-66661773 MS.gene022246:intron 45.0%
TCATGTCCATGCAAATGCCA+TGG - chr3.3:66665880-66665899 None:intergenic 45.0%
TCCTTCTGTAGAGAGCTTGT+TGG - chr3.3:66660627-66660646 None:intergenic 45.0%
TGCACATGGAGGAGATTAAG+TGG - chr3.3:66663195-66663214 None:intergenic 45.0%
TGGAGCTGAAATAGGTGCTA+AGG - chr3.3:66663246-66663265 None:intergenic 45.0%
TTCACCAACCCATCTCATTG+GGG - chr3.3:66662084-66662103 None:intergenic 45.0%
! AGAAAAACCATTGCTGGCCT+GGG - chr3.3:66661774-66661793 None:intergenic 45.0%
! AGCTTGCTCATCAATGGAAG+AGG + chr3.3:66664461-66664480 MS.gene022246:CDS 45.0%
! ATTGTGCGGTCTGCGATTTT+TGG - chr3.3:66665562-66665581 None:intergenic 45.0%
! CAAGGCTCTCTTTGAGAGTT+GGG - chr3.3:66662705-66662724 None:intergenic 45.0%
! CATAATGGAGTGATTGGTGG+TGG - chr3.3:66665472-66665491 None:intergenic 45.0%
! CCACAAGTAAGAGCATGTGT+AGG - chr3.3:66666141-66666160 None:intergenic 45.0%
! CGATTGAGAGCCAGTAGTTT+TGG - chr3.3:66665363-66665382 None:intergenic 45.0%
! GAAGGGTATGGGTTTGATGA+TGG - chr3.3:66663269-66663288 None:intergenic 45.0%
! GTTGGTGAGGTCAATGACAA+CGG - chr3.3:66660609-66660628 None:intergenic 45.0%
! TATGGTGTGTGTGTGGATTG+GGG - chr3.3:66663170-66663189 None:intergenic 45.0%
! TCTTAAACGGCTAGTTGAGC+TGG - chr3.3:66664921-66664940 None:intergenic 45.0%
! TGTTTTCCTTGCGATGCGAA+TGG - chr3.3:66664786-66664805 None:intergenic 45.0%
!! GATGATGGTGGAGCTGAAAT+AGG - chr3.3:66663254-66663273 None:intergenic 45.0%
!! TATGGGAGGGTTTTGTGATC+AGG - chr3.3:66663077-66663096 None:intergenic 45.0%
!! TGGCTTTGAGGCTATTGCTT+AGG + chr3.3:66663587-66663606 MS.gene022246:intron 45.0%
!! TTAATCTGAACTGGTGCTGC+TGG + chr3.3:66664164-66664183 MS.gene022246:intron 45.0%
!!! GAGAGCCAGTAGTTTTGGTT+GGG - chr3.3:66665358-66665377 None:intergenic 45.0%
!!! GGGTTTTGGGATATGGTGAA+GGG + chr3.3:66665905-66665924 MS.gene022246:CDS 45.0%
!!! TGAGAGCCAGTAGTTTTGGT+TGG - chr3.3:66665359-66665378 None:intergenic 45.0%
!!! TGGGTTTTGGGATATGGTGA+AGG + chr3.3:66665904-66665923 MS.gene022246:CDS 45.0%
!! TTATAATAATATAATAACTA+GGG + chr3.3:66661825-66661844 MS.gene022246:intron 5.0%
!! TTTATAATAATATAATAACT+AGG + chr3.3:66661824-66661843 MS.gene022246:intron 5.0%
AAGCAAGAGAGGAAGAGGAG+AGG + chr3.3:66661099-66661118 MS.gene022246:intron 50.0%
AATGAGTATGGAGTGGGTGC+AGG - chr3.3:66663428-66663447 None:intergenic 50.0%
ATCTCATTGGGGCTGAAGAG+AGG - chr3.3:66662073-66662092 None:intergenic 50.0%
ATCTGCTCCTCAGTGATCTG+TGG + chr3.3:66662018-66662037 MS.gene022246:CDS 50.0%
ATTGGAACTCCTTGGGCTGA+TGG + chr3.3:66661606-66661625 MS.gene022246:CDS 50.0%
CATCTGCTTCCACCACAACA+AGG - chr3.3:66665249-66665268 None:intergenic 50.0%
CATGAGAGTGGAGAGAGACA+GGG + chr3.3:66661168-66661187 MS.gene022246:intron 50.0%
CCCATTCCCAGATGCAAATG+TGG - chr3.3:66666078-66666097 None:intergenic 50.0%
CCGTTACCCGTTGTTGTACT+TGG - chr3.3:66665772-66665791 None:intergenic 50.0%
CGTGAGCATAGCTAGTTGGT+AGG + chr3.3:66663725-66663744 MS.gene022246:intron 50.0%
CGTGTGTAGAAGGACTGAGT+AGG - chr3.3:66665326-66665345 None:intergenic 50.0%
CTCTTCAGCCCCAATGAGAT+GGG + chr3.3:66662073-66662092 MS.gene022246:CDS 50.0%
GAAATTGCATTGAGGCAGGG+TGG - chr3.3:66664525-66664544 None:intergenic 50.0%
GATCTTGGTCCGTGTGTAGA+AGG - chr3.3:66665336-66665355 None:intergenic 50.0%
GATGAGTAGGCAAGCAAGAG+AGG + chr3.3:66661088-66661107 MS.gene022246:intron 50.0%
GGACAATGAGACGAGGACTT+TGG - chr3.3:66662680-66662699 None:intergenic 50.0%
GGCGCTACTTCGAGAATCTT+GGG - chr3.3:66664569-66664588 None:intergenic 50.0%
GGTTCACCAACCCATCTCAT+TGG - chr3.3:66662086-66662105 None:intergenic 50.0%
TAGGCAAGCAAGAGAGGAAG+AGG + chr3.3:66661094-66661113 MS.gene022246:intron 50.0%
TATATCTCCCAGGCCAGCAA+TGG + chr3.3:66661764-66661783 MS.gene022246:intron 50.0%
TCACTGGCATGGAATCAGAC+AGG + chr3.3:66660655-66660674 MS.gene022246:CDS 50.0%
TCTCTTCAGCCCCAATGAGA+TGG + chr3.3:66662072-66662091 MS.gene022246:CDS 50.0%
TGAGAGGTGGAGTATGCACA+TGG - chr3.3:66663209-66663228 None:intergenic 50.0%
TGCAAATCTATGGCGTCGCA+TGG + chr3.3:66664895-66664914 MS.gene022246:intron 50.0%
TGGCGCTACTTCGAGAATCT+TGG - chr3.3:66664570-66664589 None:intergenic 50.0%
TTGTGTGCCACAGATCACTG+AGG - chr3.3:66662028-66662047 None:intergenic 50.0%
! AAGGGAGAAAGGCATGAGAG+TGG + chr3.3:66661156-66661175 MS.gene022246:intron 50.0%
! AGGTGAATAAGTGGGGTGTC+CGG - chr3.3:66663789-66663808 None:intergenic 50.0%
! AGGTTTAAGGCAGACAACCC+TGG + chr3.3:66666024-66666043 MS.gene022246:CDS 50.0%
! CTATGCTCACGGGACCTTTT+TGG - chr3.3:66663716-66663735 None:intergenic 50.0%
! CTTGTTGTGGTGGAAGCAGA+TGG + chr3.3:66665247-66665266 MS.gene022246:CDS 50.0%
! GAATCACACCCTTGTTGTGG+TGG + chr3.3:66665237-66665256 MS.gene022246:intron 50.0%
! GCAAGGCTCTCTTTGAGAGT+TGG - chr3.3:66662706-66662725 None:intergenic 50.0%
! GCTCTCTTTGAGAGTTGGGA+GGG - chr3.3:66662701-66662720 None:intergenic 50.0%
! GGCCAAGTTGAGAGAAGCTA+AGG - chr3.3:66664630-66664649 None:intergenic 50.0%
! GGGTGATGGTAGAGCTGAAA+TGG - chr3.3:66663336-66663355 None:intergenic 50.0%
! TCAGCTCTAATAGTTGGGCC+AGG - chr3.3:66660575-66660594 None:intergenic 50.0%
!! CTGTAGAGAGCTTGTTGGTG+AGG - chr3.3:66660622-66660641 None:intergenic 50.0%
!! GGGTATGGGTTTGATGATGG+TGG - chr3.3:66663266-66663285 None:intergenic 50.0%
!! TGTGTGTGTGGATTGGGGAA+TGG - chr3.3:66663165-66663184 None:intergenic 50.0%
!!! TCTGCGATTTTTGGTGGCTG+TGG - chr3.3:66665553-66665572 None:intergenic 50.0%
AAGTGAGTTCTCACCACCGC+TGG + chr3.3:66664010-66664029 MS.gene022246:intron 55.0%
AGGCAGACAACCCTGGTGTT+TGG + chr3.3:66666031-66666050 MS.gene022246:CDS 55.0%
ATGGCATGCAGAGAGCAGCA+GGG + chr3.3:66661925-66661944 MS.gene022246:CDS 55.0%
CAGAGAGCAGCAGGGTTGTA+TGG + chr3.3:66661933-66661952 MS.gene022246:CDS 55.0%
GAGGTGGAGTATGCACATGG+AGG - chr3.3:66663206-66663225 None:intergenic 55.0%
GCATGAGAGTGGAGAGAGAC+AGG + chr3.3:66661167-66661186 MS.gene022246:intron 55.0%
GGCAGACAACCCTGGTGTTT+GGG + chr3.3:66666032-66666051 MS.gene022246:CDS 55.0%
GTCCCGTGAGCATAGCTAGT+TGG + chr3.3:66663721-66663740 MS.gene022246:intron 55.0%
TATGGCATGCAGAGAGCAGC+AGG + chr3.3:66661924-66661943 MS.gene022246:CDS 55.0%
TCAGCCCCAATGAGATGGGT+TGG + chr3.3:66662077-66662096 MS.gene022246:CDS 55.0%
TGGCTGTGGTGTTCCCATTC+TGG - chr3.3:66665539-66665558 None:intergenic 55.0%
TTGGGAGGGACAATGAGACG+AGG - chr3.3:66662687-66662706 None:intergenic 55.0%
! GGCTCTCTTTGAGAGTTGGG+AGG - chr3.3:66662702-66662721 None:intergenic 55.0%
!! GAGATGGGTTGGTGAACCAC+AGG + chr3.3:66662088-66662107 MS.gene022246:CDS 55.0%
!! GTGCGGTCTGCGATTTTTGG+TGG - chr3.3:66665559-66665578 None:intergenic 55.0%
GAGTATGGAGTGGGTGCAGG+TGG - chr3.3:66663425-66663444 None:intergenic 60.0%
GCAGCAGTTCCATCAGCCCA+AGG - chr3.3:66661618-66661637 None:intergenic 60.0%
GGTGTCCGGAGTTCGAACCC+CGG - chr3.3:66663775-66663794 None:intergenic 65.0%
GTGGAGGTGGTTGTGGCCAG+CGG - chr3.3:66664029-66664048 None:intergenic 65.0%
AGGGGCCGGGGTTCGAACTC+CGG + chr3.3:66663767-66663786 MS.gene022246:intron 70.0%
GAGGTGGTTGTGGCCAGCGG+TGG - chr3.3:66664026-66664045 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 66660416 66666200 66660416 ID=MS.gene022246
chr3.3 mRNA 66660416 66666200 66660416 ID=MS.gene022246.t1;Parent=MS.gene022246
chr3.3 exon 66660416 66660676 66660416 ID=MS.gene022246.t1.exon1;Parent=MS.gene022246.t1
chr3.3 CDS 66660416 66660676 66660416 ID=cds.MS.gene022246.t1;Parent=MS.gene022246.t1
chr3.3 exon 66661606 66661698 66661606 ID=MS.gene022246.t1.exon2;Parent=MS.gene022246.t1
chr3.3 CDS 66661606 66661698 66661606 ID=cds.MS.gene022246.t1;Parent=MS.gene022246.t1
chr3.3 exon 66661897 66662109 66661897 ID=MS.gene022246.t1.exon3;Parent=MS.gene022246.t1
chr3.3 CDS 66661897 66662109 66661897 ID=cds.MS.gene022246.t1;Parent=MS.gene022246.t1
chr3.3 exon 66664461 66664655 66664461 ID=MS.gene022246.t1.exon4;Parent=MS.gene022246.t1
chr3.3 CDS 66664461 66664655 66664461 ID=cds.MS.gene022246.t1;Parent=MS.gene022246.t1
chr3.3 exon 66665238 66666200 66665238 ID=MS.gene022246.t1.exon5;Parent=MS.gene022246.t1
chr3.3 CDS 66665238 66666200 66665238 ID=cds.MS.gene022246.t1;Parent=MS.gene022246.t1
Gene Sequence

>MS.gene022246

ATGAGTTTGTTAAAAGCTGTTTTTGTTTGGTATATATGGTTAGGGTTATTTGAGTTATCATTAGCAAAAGTGAAACATTACAAGTTTGATGTGGAATACATGTACAAAACGCCAGATTGCATAGAGCATGTTGTGATGGGAATCAATGGTCAGTTTCCTGGCCCAACTATTAGAGCTGAAGTTGGTGACACCGTTGTCATTGACCTCACCAACAAGCTCTCTACAGAAGGAACTGTTATTCACTGGCATGGAATCAGACAGGTAAATTTTCTTTCTCTTATTCTAGATGTTTTAATCATCACAAGCTAAGTATAATTAACATTAGTGATGTCTTTGATTAGTAAAATGTTAAGTATTGCTCATAATAGTAACAGACGGTATTAAACTGTACATGAATTATTATTTTTTGTGCTCTTCATTGTATTTGATGGTTGACGGACAAGGCAAATAATTTTGTGATGCATCTTGTTTAATATTTCTATGTATTTGATAAAATAATATAACTTTTAATACAATACTTGATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGAATGTAAATATTCATAAAGATGAGGGAGGAAATAAAAATGATATCTAGGGAGAGAGATCGAAGATGAGTAGGCAAGCAAGAGAGGAAGAGGAGAGGTAAAGACCATATGGGTGAGAGAGAGTAAAGGGTTAAGGGAGAAAGGCATGAGAGTGGAGAGAGACAGGGAGTAAAGATGGACCAATTTTTGTTTGGGCAGAACAAAATGTATAACCATGCACACAAAGTGATAAAAAGAGGCACATATTCTAAAAATGTTCGATCAATTTTTATTTTTTTTTTTATTAGAGAGAAGCTATTTTTATATAGAAAATAAAATTATTATTTTGATAGTTTGTAAAAAGTTTTCTTATGGTTAAGTGAGTAGAGATTGGGACAAATTTTTTTTTTTGTTTTTGTTCAATATCTTGCTGTCTGTTTTATCCAATCTATGACCAATTTCTAAAAAAGTTCAAAGTAATTTTTTTTGTCAATTCATCGAGTTTTAAAATAAAATTAATGCACCTTATACATTTTTTGTTGTTTTTTTGGTAGGATACAATTTTTGTTGTTGTTTGCTAATTAAAATAATAATGTTTTGTAGATTGGAACTCCTTGGGCTGATGGAACTGCTGCAATCTCTCAGTGTGCTATAAATCCAGGAGAAACTTTTCATTACAGATTCATTGTTGACAGGGTAATTAATTAGTTAATTAATTAAATATTTGATTAGTTTAATCACTTATTTGAGATCAAGTGGCATATATCTCCCAGGCCAGCAATGGTTTTTCTTTTGTTGTTTTGTTTTTGAGTATCTTTTATTTTATAATAATATAATAACTAGGGCTAACATATATATGATATTAACGTGTGGGTGTTTAATCATATGGTGCAGCCTGGTACATATTTCTATCATGGACACTATGGCATGCAGAGAGCAGCAGGGTTGTATGGTTCTCTAATAGTAGATTTACCAAACAACCAAAGCGAGCCATTTCATTATGATGGTGAGTTTAATCTGCTCCTCAGTGATCTGTGGCACACAAGTTCACAAGAACAAGAGGTTGGCCTCTCTTCAGCCCCAATGAGATGGGTTGGTGAACCACAGGTATACTTTCAACTTTTTTAATACAAAAATATCATGTTCATTCAATTTACATTTTATTCATTTATGTTGTCAAATCTTAAAAATAGCTATATTTATCAATATAATAATAGAATAAAAATTTAATTCATATACATCGTTAGTATAAAAAAAAATTAGATCGTAAATCAATCACAACTGTTAAATCATTAAAAATGTTTGACATTTGTTTTTGTACTATCATAATAACTACTTTTAACGTTTGTTATGATGTTCAAATCCAAATCGATCCAAATTAAAACTACAAAAAGTCAAAGATTATTGCATGTCTTTATAATTCCTTATAGCAAACCCAATCTTTGTTTGGGAGTTTTGAGGGTAGAGCTTGTAAAAAAAGGAAGCAAGAATCATAAAGAATGGAGAACTTTAGAGGGTTGGGTTTTGTGTAAATTTTTAAATCCAATCTATCTTGTTATAATACTTAGAAGTAAAAAATAAATTAATCGTAAGTATTAATTTATTATTTTCTACAAAAACATTCTCTTAAAATTTTGAAAAATTTCTCAATTTTTCTACTCTAATTTCATCTCTCCAAAGTCCTCGTCTCATTGTCCCTCCCAACTCTCAAAGAGAGCCTTGCACGTTTTTATTGATCATTGTATTATTTATTACTCTAAACTTTTTATAACTAATTAACGTATATAAGACCTCTCTAAACGTTTTGTAATTTCTATGCTTCTGTTACTTTTCCCTATAAAATAATGTTTTTGGTACTTTTATTAGGGTGTTCAAGATTATGTCACATGGATAGCTATGAACTAGTTAGAATACTATATATTGAGTATATATGGTCTCAATAGACAGGGAATAAAAATGAATGAAAAAGTTATTTTAATTTTTTTAATTAGTTTTGTCCTTTTCTCCTTTTGCTCTTAGAACCCTAGTTTCCTTAGTGATATGTTTTAGATGGTATCAATTGGTGCTTCATCCTGATCACAAAACCCTCCCATAACTGATTTTCCTTCTACATATCCATATTACTCGATCCTCACAATGCAACCACCAGTATTATAGCTCCATTCCCCAATCCACACACACACCATATTCCACTTAATCTCCTCCATGTGCATACTCCACCTCTCACCCATATTATTCAACCTTAGCACCTATTTCAGCTCCACCATCATCAAACCCATACCCTTCATAATTACCTTCCTCCAACCAATACATTTATGGAAACCCAAACACCATTTCAGCTCTACCATCACCCAACCTTTACTATACCCTTCCTATTCAACTTCTTTCAACCCATACAATCATGGCTACAGTCTATATACCACCTGCACCCACTCCATACTCATTGTTAATAAGTTATTTTGGTCCATATGGTTTTCAACAACAATCTCATCTGGATTATTCAAAGGCACTCTCATATGGGAAATTTTTCAGTGTTCCCCTCATACCTATATCCGCTTTATGCTTCGCTTTCTAAAAGTGTTTCTGGCTTTGAGGCTATTGCTTAGGTTGATGCCAATAATGCTTTGCTTTAAATCCAATTTAGATTGTTATAATACTCATAAGATTAAATATATTAATCATAACTCATAAGTATGCAATTAACATTGTACCAAAAAGGTCCCGTGAGCATAGCTAGTTGGTAGGACAATGCATTATTATATGTAGGGGCCGGGGTTCGAACTCCGGACACCCCACTTATTCACCTTATAAGGTAAATTCTAGCCATTAAGCTACCTGACCAAAAAAATAACACATTGTACCAAAAAAAAGTATGCGATTAACATTATCTGAAAATCTGAAAAAAAATACTCTCTTAAATTTTTAAAAGATTTCTTTATTTTTTCTCTACTCTTATCCTCTAAAAATCACTATCTCATTTCCCTCTAAGCTTCCAAATTGAATCTTAAAGTGAGTTCTCACCACCGCTGGCCACAACCACCTCCACTTGTAATATTTTCTTTTTCAACAGCACATATTTGAAGAAAGAAATTTGAATTTGATTTTTATATTTTTACAATAATGTATTTTTTTTATTAATAATATTTTATATTTTTATATTATTAATCTGAACTGGTGCTGCTGGATCTATATCCTTAGTTTATCCTTTAACTTTTAATAAAGGAAAACATATTTTTTAAAATAAATAAAACAAGTGAAAGCATCTTATTACAGTAAGTATTTTAAATTTCTACAAAAAAACAAAACAGTAAGTATTTTAAATAAAAGTAATACCATAAGATTAATTTAATCATGGATATGGTACCTAAACAACATTGTCTTTTTTCTTATTTATAATTGCATGCCTTATGAATGACATTTTTTTCCTAACCCACCATACATTATGATGACTTTTTTAGAGCTTGCTCATCAATGGAAGAGGGCAGTTCAATTGTTCCCTAGCAGCTAATTTCGTGAACACCACCCTGCCTCAATGCAATTTCAAAGGTGGTGAAGAATGCGCACCCAAGATTCTCGAAGTAGCGCCAAAAAAAACCTACAGAATTAGGATTGCAAGTACAACGTCCTTAGCTTCTCTCAACTTGGCCATTTCAGTAAGTTTTTGATCTATTTCTAGTTATGACCTACTAGATATATATTTGCATTATTTTACTATCTCTCTTTCTTGTGTAGTAGGTATGAAAGGTATACATTGTCTTACGTTACATAATTTATATTATTCCATTCGCATCGCAAGGAAAACATGACTAATAGGTCAAAGAAGTTAGAAAAATATATTTGAAAAAAATCGACAACAATCCTCGATTGTGTATAAAAAAATGTTTGGTAGATGTGCAAATCTATGGCGTCGCATGGCCAGCTCAACTAGCCGTTTAAGATTATTTTGTAATGGGGAGGCTTGGTTGTATGCACAACTCTTGCATGAATAGAACCTCAAATATATACTTTATTTGGATAGACATAATGATTAAAAAATTACAAGAGATATGATATTAAATTATGTGTCTTTTTTTATTTGTATTAAATCAATGTGAGTTTCACATTTTAGAAATAGATTTGACATAAAGTTATGTGACCTAAACTGATTTTATCGATGAACGTAGAGTTTTTTATTATGTTCATTATTATCATTCATTCATCAATTAACGGTGCGCCATAATTTTTGTGTCATGTAGAATCACACCCTTGTTGTGGTGGAAGCAGATGGAAACTACGTGCACCCATTCACGGTTGATAGCATAGACATCTACTCAGGCGAAACCTACTCAGTCCTTCTACACACGGACCAAGATCCCAACCAAAACTACTGGCTCTCAATCGGCATTATAAGCAGAAAATCAGACACACCACAAGCCCTAACAATCCTTAACTATAATACAAACCCTGCCTCAACTTTCCCTATATTACCACCACCAATCACTCCATTATGGAACGATTTCGAGCGCAGCAAAGCATTCACAAAACAAATCATTTCCAGAATGGGAACACCACAGCCACCAAAAATCGCAGACCGCACAATTTACCTCCTCAACACACAAAACAAAATCGGTAATTTCACTAAATGGGCTATTAATAATGTTTCCTTAACATTGCCAATAACACCTTACTTAGGAGCAATCAAATATAAACTAAACAATACATTTGATAGAAATCCACCACCAGATAGATTCCCATTTGATTTCGACATATTTAAAACTCCAGTTAATCCAAGTACAACAACGGGTAACGGTGTTTACACGTTTCACTTAAATGAGGTTGTTGATGTGATACTACAAAATGCAAACATGTTAAAAGATAATACTAGTGAAGTTCATCCATGGCATTTGCATGGACATGATTTTTGGGTTTTGGGATATGGTGAAGGGAAATTTCAACCAGGTGTTCATCAGAAAAGTTTGAATTTGACACGTGCACCTTTGAGGAACACTGCAGTTATATTTCCTTATGGTTGGACTGCATTAAGGTTTAAGGCAGACAACCCTGGTGTTTGGGCATTTCATTGTCACATTGAACCACATTTGCATCTGGGAATGGGTGTTATTTTTGCTGAGGGTGTTCATAAAATTGGGAACATACCTACACATGCTCTTACTTGTGGTGCTACAGCCAAGATGTTCCTAAACAACACCCACAACTGA
Protein sequence

>MS.gene022246.t1

MSLLKAVFVWYIWLGLFELSLAKVKHYKFDVEYMYKTPDCIEHVVMGINGQFPGPTIRAEVGDTVVIDLTNKLSTEGTVIHWHGIRQIGTPWADGTAAISQCAINPGETFHYRFIVDRPGTYFYHGHYGMQRAAGLYGSLIVDLPNNQSEPFHYDGEFNLLLSDLWHTSSQEQEVGLSSAPMRWVGEPQSLLINGRGQFNCSLAANFVNTTLPQCNFKGGEECAPKILEVAPKKTYRIRIASTTSLASLNLAISNHTLVVVEADGNYVHPFTVDSIDIYSGETYSVLLHTDQDPNQNYWLSIGIISRKSDTPQALTILNYNTNPASTFPILPPPITPLWNDFERSKAFTKQIISRMGTPQPPKIADRTIYLLNTQNKIGNFTKWAINNVSLTLPITPYLGAIKYKLNNTFDRNPPPDRFPFDFDIFKTPVNPSTTTGNGVYTFHLNEVVDVILQNANMLKDNTSEVHPWHLHGHDFWVLGYGEGKFQPGVHQKSLNLTRAPLRNTAVIFPYGWTALRFKADNPGVWAFHCHIEPHLHLGMGVIFAEGVHKIGNIPTHALTCGATAKMFLNNTHN