AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene022247

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene022247.t1 MTR_3g078700 91.166 566 22 2 1 565 1 539 0.0 1060
MS.gene022247.t1 MTR_3g078740 82.852 589 76 3 1 565 1 588 0.0 1023
MS.gene022247.t1 MTR_3g078730 81.770 565 76 1 1 565 1 538 0.0 943
MS.gene022247.t1 MTR_8g091390 49.818 550 269 5 17 564 26 570 0.0 561
MS.gene022247.t1 MTR_5g069680 33.511 564 321 20 4 545 6 537 7.61e-72 240
MS.gene022247.t1 MTR_7g058690 32.230 574 320 16 7 542 14 556 1.17e-71 240
MS.gene022247.t1 MTR_5g083360 30.465 581 331 18 1 544 1 545 5.56e-71 238
MS.gene022247.t1 MTR_5g081810 32.642 530 296 17 40 544 14 507 1.43e-70 236
MS.gene022247.t1 MTR_5g020620 31.634 569 327 19 1 544 8 539 3.15e-70 236
MS.gene022247.t1 MTR_7g060460 33.043 575 322 20 2 540 8 555 1.41e-69 234
MS.gene022247.t1 MTR_7g458880 31.937 573 325 17 4 540 11 554 9.66e-69 233
MS.gene022247.t1 MTR_5g020600 30.976 594 338 22 1 561 12 566 8.66e-68 229
MS.gene022247.t1 MTR_3g462760 33.272 541 316 16 22 545 23 535 1.41e-67 229
MS.gene022247.t1 MTR_7g062250 30.449 601 334 20 7 561 16 578 1.48e-67 229
MS.gene022247.t1 MTR_5g073210 31.373 561 328 18 9 541 4 535 9.30e-67 227
MS.gene022247.t1 MTR_2g008330 32.099 567 317 21 12 544 25 557 1.64e-65 224
MS.gene022247.t1 MTR_4g064530 33.031 551 299 22 25 540 44 559 2.12e-65 224
MS.gene022247.t1 MTR_3g101635 30.245 572 341 16 1 544 3 544 1.77e-62 215
MS.gene022247.t1 MTR_7g062310 30.660 561 338 14 21 553 43 580 2.43e-62 216
MS.gene022247.t1 MTR_8g027375 30.216 556 312 20 25 544 34 549 5.97e-60 209
MS.gene022247.t1 MTR_7g065980 29.066 578 339 21 7 544 3 549 1.98e-59 207
MS.gene022247.t1 MTR_4g064530 31.882 574 310 24 3 530 11 549 1.72e-58 204
MS.gene022247.t1 MTR_3g101640 30.189 583 334 23 1 544 1 549 2.13e-57 202
MS.gene022247.t1 MTR_3g071890 30.561 553 314 22 2 522 12 526 5.38e-57 201
MS.gene022247.t1 MTR_8g479390 28.007 557 335 16 25 565 31 537 1.15e-55 196
MS.gene022247.t1 MTR_4g049390 28.366 557 328 17 25 562 27 531 2.81e-55 195
MS.gene022247.t1 MTR_7g065970 28.098 573 324 23 18 544 18 548 3.98e-55 196
MS.gene022247.t1 MTR_4g132320 28.242 563 327 18 25 565 31 538 3.67e-54 192
MS.gene022247.t1 MTR_4g019225 28.546 557 331 16 24 544 25 550 6.73e-54 192
MS.gene022247.t1 MTR_3g115050 27.692 585 342 22 6 565 9 537 1.44e-53 191
MS.gene022247.t1 MTR_4g083190 26.976 582 361 20 1 562 1 538 3.47e-53 190
MS.gene022247.t1 MTR_4g048350 27.748 555 333 15 25 562 27 530 1.90e-52 187
MS.gene022247.t1 MTR_8g479380 27.341 534 316 18 48 562 52 532 6.65e-52 186
MS.gene022247.t1 MTR_5g018270 28.674 558 321 20 25 562 31 531 8.88e-52 186
MS.gene022247.t1 MTR_3g083440 27.778 576 349 21 7 562 8 536 6.33e-51 184
MS.gene022247.t1 MTR_3g083450 28.366 557 333 20 26 562 27 537 6.84e-51 184
MS.gene022247.t1 MTR_3g083390 28.007 582 340 23 7 562 8 536 8.57e-51 183
MS.gene022247.t1 MTR_3g008580 26.958 549 341 16 37 562 41 552 2.78e-50 182
MS.gene022247.t1 MTR_3g083400 27.778 576 349 21 7 562 8 536 4.86e-50 181
MS.gene022247.t1 MTR_1g026410 26.863 577 345 20 11 562 9 533 5.26e-50 181
MS.gene022247.t1 MTR_4g101650 27.837 564 337 18 27 562 29 550 6.67e-50 182
MS.gene022247.t1 MTR_3g083430 28.007 582 340 23 7 562 8 536 1.32e-49 180
MS.gene022247.t1 MTR_2g088080 27.305 564 325 19 25 562 30 534 1.40e-49 180
MS.gene022247.t1 MTR_1g090707 27.451 510 313 15 44 539 43 509 2.82e-49 180
MS.gene022247.t1 MTR_3g083410 28.224 535 318 21 48 562 12 500 7.44e-49 177
MS.gene022247.t1 MTR_4g075690 26.212 557 339 17 25 562 30 533 2.29e-48 176
MS.gene022247.t1 MTR_7g051440 26.560 561 347 19 26 562 30 549 2.62e-46 172
MS.gene022247.t1 MTR_4g083210 27.224 562 329 21 26 562 26 532 3.58e-45 167
MS.gene022247.t1 MTR_3g079660 75.556 90 22 0 476 565 5 94 3.33e-43 149
MS.gene022247.t1 MTR_2g088080 25.882 510 294 18 79 562 2 453 8.62e-38 145
MS.gene022247.t1 MTR_4g015120 33.559 295 165 9 7 296 9 277 5.40e-37 145
MS.gene022247.t1 MTR_4g015120 40.120 167 95 3 379 544 373 535 7.46e-29 121
MS.gene022247.t1 MTR_4g075690 25.957 470 282 15 25 480 30 447 5.80e-37 143
MS.gene022247.t1 MTR_2g009230 90.164 61 6 0 130 190 1 61 3.86e-33 121
MS.gene022247.t1 MTR_5g081790 30.640 297 170 10 251 524 137 420 3.99e-23 102
MS.gene022247.t1 MTR_5g081790 34.899 149 86 5 6 147 7 151 1.91e-18 88.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene022247.t1 AT5G21105 66.786 560 182 2 9 564 19 578 0.0 800
MS.gene022247.t1 AT5G21100 63.587 552 193 5 17 564 16 563 0.0 738
MS.gene022247.t1 AT5G21105 65.720 528 177 2 1 524 11 538 0.0 737
MS.gene022247.t1 AT4G39830 48.866 573 270 9 7 564 16 580 0.0 572
MS.gene022247.t1 AT5G21105 67.109 377 123 1 189 564 11 387 0.0 549
MS.gene022247.t1 AT4G39830 49.084 491 229 8 87 564 3 485 2.14e-168 487
MS.gene022247.t1 AT4G39830 49.080 489 228 8 89 564 3 483 1.01e-167 485
MS.gene022247.t1 AT4G39830 47.047 491 226 9 87 564 3 472 4.78e-155 452
MS.gene022247.t1 AT5G05390 29.604 581 334 17 1 544 1 543 1.14e-70 237
MS.gene022247.t1 AT5G58910 32.310 554 305 20 24 544 29 545 7.10e-67 227
MS.gene022247.t1 AT5G03260 30.973 565 330 19 7 545 6 536 1.50e-66 226
MS.gene022247.t1 AT5G58910 32.491 554 303 21 24 544 29 544 7.24e-66 224
MS.gene022247.t1 AT5G07130 32.062 577 329 19 1 544 1 547 1.68e-65 224
MS.gene022247.t1 AT5G48100 31.459 569 314 22 14 544 11 541 2.55e-64 220
MS.gene022247.t1 AT2G30210 30.309 551 333 13 21 544 22 548 4.51e-64 220
MS.gene022247.t1 AT2G29130 32.689 569 327 20 1 540 6 547 5.42e-64 219
MS.gene022247.t1 AT2G40370 28.231 588 348 16 1 544 1 558 2.60e-63 218
MS.gene022247.t1 AT5G09360 30.729 576 327 19 1 544 12 547 5.00e-63 217
MS.gene022247.t1 AT2G46570 29.982 557 318 20 22 544 29 547 3.70e-62 214
MS.gene022247.t1 AT1G18140 30.159 567 323 17 20 544 24 559 1.61e-61 213
MS.gene022247.t1 AT5G01040 29.152 566 336 17 10 544 13 544 1.64e-61 213
MS.gene022247.t1 AT5G01050 29.174 569 334 18 10 544 13 546 2.65e-61 213
MS.gene022247.t1 AT2G38080 31.525 590 332 22 8 561 5 558 2.80e-61 212
MS.gene022247.t1 AT3G09220 29.381 565 335 18 12 544 13 545 3.05e-59 207
MS.gene022247.t1 AT1G55570 30.249 562 317 22 26 562 30 541 4.77e-58 203
MS.gene022247.t1 AT5G60020 30.329 577 337 19 1 540 3 551 5.22e-58 204
MS.gene022247.t1 AT5G01190 30.511 567 333 19 24 561 24 558 9.95e-58 202
MS.gene022247.t1 AT5G58910 31.227 538 293 21 40 544 8 501 4.91e-57 200
MS.gene022247.t1 AT5G01190 30.769 546 317 19 45 561 31 544 1.19e-55 196
MS.gene022247.t1 AT5G60020 30.483 538 311 17 40 540 8 519 1.11e-54 194
MS.gene022247.t1 AT4G22010 28.674 558 326 19 25 562 26 531 1.56e-53 191
MS.gene022247.t1 AT1G21860 27.972 572 337 17 16 565 16 534 1.86e-53 190
MS.gene022247.t1 AT3G13390 29.485 563 320 23 26 562 29 540 3.71e-53 190
MS.gene022247.t1 AT4G25240 29.472 587 346 22 4 563 7 552 8.34e-53 189
MS.gene022247.t1 AT4G25240 29.472 587 346 22 4 563 7 552 8.34e-53 189
MS.gene022247.t1 AT1G21850 27.682 578 350 18 4 562 3 531 1.21e-52 188
MS.gene022247.t1 AT4G12420 27.080 565 346 19 27 565 27 551 1.74e-52 189
MS.gene022247.t1 AT4G12420 27.080 565 346 19 27 565 27 551 1.74e-52 189
MS.gene022247.t1 AT5G51480 28.164 561 341 21 27 563 30 552 2.31e-52 188
MS.gene022247.t1 AT1G75790 27.243 602 335 21 4 562 1 542 3.48e-51 184
MS.gene022247.t1 AT5G60020 29.196 572 318 21 1 524 3 535 9.59e-51 183
MS.gene022247.t1 AT5G48450 25.907 579 361 17 9 562 8 543 2.78e-50 182
MS.gene022247.t1 AT5G48450 25.907 579 361 17 9 562 8 543 5.15e-50 182
MS.gene022247.t1 AT1G76160 26.235 587 351 19 5 565 4 534 7.20e-50 181
MS.gene022247.t1 AT5G66920 26.908 524 325 12 25 539 37 511 1.25e-49 180
MS.gene022247.t1 AT2G23630 26.944 553 336 16 27 562 37 538 3.40e-48 176
MS.gene022247.t1 AT2G46570 29.234 496 280 19 83 544 4 462 4.95e-48 174
MS.gene022247.t1 AT2G23630 26.944 553 336 16 27 562 32 533 5.33e-48 176
MS.gene022247.t1 AT5G07130 31.134 485 277 16 91 544 4 462 1.73e-47 173
MS.gene022247.t1 AT5G07130 31.134 485 277 16 91 544 4 462 1.73e-47 173
MS.gene022247.t1 AT4G28090 26.792 586 344 21 9 565 9 538 6.76e-47 172
MS.gene022247.t1 AT4G37160 25.859 553 343 16 27 562 33 535 6.79e-47 172
MS.gene022247.t1 AT1G41830 24.352 579 360 18 6 562 10 532 2.09e-46 171
MS.gene022247.t1 AT3G13400 26.523 558 342 22 26 562 28 538 6.20e-42 159
MS.gene022247.t1 AT3G13400 26.523 558 342 22 26 562 28 538 6.20e-42 159
MS.gene022247.t1 AT1G55560 26.354 554 346 19 27 562 28 537 4.34e-41 156
MS.gene022247.t1 AT3G09220 28.452 478 279 17 99 544 2 448 1.17e-40 154
MS.gene022247.t1 AT4G38420 24.735 566 349 18 25 565 30 543 5.73e-40 153
MS.gene022247.t1 AT4G37160 25.966 466 284 14 27 480 33 449 7.91e-36 140
MS.gene022247.t1 AT4G38420 24.405 504 309 16 25 508 30 481 7.75e-31 126
MS.gene022247.t1 AT4G38420 24.580 476 288 15 25 480 30 454 1.82e-29 121

Find 144 sgRNAs with CRISPR-Local

Find 387 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATCGGTAGTTTCACTAAA+TGG 0.163317 3.3:+66649426 MS.gene022247:CDS
TATTTCTATCATGGACATTT+TGG 0.179942 3.3:+66645035 MS.gene022247:CDS
CAAAATGCAAACCAGTTAAA+TGG 0.189861 3.3:+66649656 MS.gene022247:CDS
CCGTTACCGGTAGTTGTATT+TGG 0.192418 3.3:-66649590 None:intergenic
AAAACAAATCATTTCCAAAA+TGG 0.220018 3.3:+66649343 MS.gene022247:CDS
TTGGACTGCATTAAGGTTTA+AGG 0.221108 3.3:+66649832 MS.gene022247:CDS
CATATGGTTGGACTGCATTA+AGG 0.257525 3.3:+66649825 MS.gene022247:CDS
TGTTCCCTAGCAGCTAAATA+TGG 0.261114 3.3:+66647081 MS.gene022247:CDS
TGGCTGTGGAGTTCCCATTT+TGG 0.285078 3.3:-66649357 None:intergenic
GTAGTTGTATTTGGATTAAC+TGG 0.289880 3.3:-66649581 None:intergenic
TTTGTTTGGTGCATATGGTT+AGG 0.295869 3.3:+66644333 MS.gene022247:CDS
CTTTCAAATTGCATTGTTGT+AGG 0.308083 3.3:-66647113 None:intergenic
AGGCAGATAACCCTGGTGTT+TGG 0.311229 3.3:+66649852 MS.gene022247:CDS
CACTACCATTCCCATTTAAC+TGG 0.315490 3.3:-66649667 None:intergenic
GGCAGATAACCCTGGTGTTT+GGG 0.315629 3.3:+66649853 MS.gene022247:CDS
TGGCTTTCAATTGGTGTTAG+AGG 0.316278 3.3:+66649191 MS.gene022247:CDS
TTGGCTCCACATGAAGAATC+TGG 0.317779 3.3:-66647155 None:intergenic
AATGGCTCTCTTTGTTCCTT+TGG 0.323053 3.3:-66645104 None:intergenic
CATTGAACCACATTTGCATA+TGG 0.333948 3.3:+66649889 MS.gene022247:CDS
CTGAGGCTGTTCATAAAGTT+AGG 0.336809 3.3:+66649930 MS.gene022247:CDS
GGAATCAATGGCCAGTTTCC+AGG 0.342868 3.3:+66644450 MS.gene022247:CDS
TAGGGTCTTGGTCTGTTGTA+AGG 0.344364 3.3:-66649157 None:intergenic
CACCACCAGTCACACCCTTA+TGG 0.345496 3.3:+66649291 MS.gene022247:CDS
GTTCACCAATCCATCTCATT+GGG 0.346982 3.3:-66645211 None:intergenic
TAATAGTTGGGCCTGGAAAC+TGG 0.350475 3.3:-66644461 None:intergenic
TTGTTTGGTGCATATGGTTA+GGG 0.369163 3.3:+66644334 MS.gene022247:CDS
AAACGTGTAAACACCGTTAC+CGG 0.380846 3.3:-66649603 None:intergenic
TTAACTTCAGCTTTAATAGT+TGG 0.382060 3.3:-66644474 None:intergenic
TAACTTCAGCTTTAATAGTT+GGG 0.385140 3.3:-66644473 None:intergenic
CCACACTTAAGAGCTTCTTT+AGG 0.398032 3.3:-66649959 None:intergenic
CTGTATTGAAAAGTTTCTCC+TGG 0.402941 3.3:-66644734 None:intergenic
TTTGCAGTTTGGAACTCCTT+GGG 0.403133 3.3:+66644673 MS.gene022247:intron
ACAACATGCTCCACACAATC+TGG 0.411894 3.3:-66644423 None:intergenic
GTTAGGGCTTGTGGTGTGCC+TGG 0.412883 3.3:-66649221 None:intergenic
GTGTTCGGTATCGTTCCATA+AGG 0.413714 3.3:-66649306 None:intergenic
CTCAATACACAAAACAAAAT+CGG 0.415806 3.3:+66649410 MS.gene022247:CDS
GTGACTGGTGGTGGTAATGT+TGG 0.417838 3.3:-66649281 None:intergenic
AAACAAATCATTTCCAAAAT+GGG 0.418944 3.3:+66649344 MS.gene022247:CDS
TTTGGAACTCCTTGGGCTGA+TGG 0.420214 3.3:+66644680 MS.gene022247:CDS
ACTGCAGTTATATTTCCATA+TGG 0.422579 3.3:+66649809 MS.gene022247:CDS
TCCTTCTGTATGGAGCTTGT+TGG 0.424095 3.3:-66644520 None:intergenic
AATACAGATTCAAAGTTGAC+AGG 0.425137 3.3:+66644750 MS.gene022247:CDS
ATTTGACACGTGCACCTTTG+AGG 0.429330 3.3:+66649783 MS.gene022247:CDS
AACTCACCATCATAATGAAA+TGG 0.432896 3.3:-66645122 None:intergenic
CTTAATGCAGTCCAACCATA+TGG 0.434255 3.3:-66649824 None:intergenic
GGTTCACCAATCCATCTCAT+TGG 0.437708 3.3:-66645212 None:intergenic
AATTTGATTGATCCTAAGTA+AGG 0.437892 3.3:-66649485 None:intergenic
AATCGGTAGTTTCACTAAAT+GGG 0.438520 3.3:+66649427 MS.gene022247:CDS
TGTGAATGCTTTGCTGTGTT+CGG 0.443250 3.3:-66649321 None:intergenic
GTTTGCAGTTTGGAACTCCT+TGG 0.444823 3.3:+66644672 MS.gene022247:intron
TTAAGGATTGTTAGGGCTTG+TGG 0.446548 3.3:-66649230 None:intergenic
AAAATGCAAACCAGTTAAAT+GGG 0.447011 3.3:+66649657 MS.gene022247:CDS
CAAAGAGCAGCAGGGCTGTA+TGG 0.448009 3.3:+66645062 MS.gene022247:CDS
CAGTTATATTTCCATATGGT+TGG 0.450338 3.3:+66649813 MS.gene022247:CDS
AGAGAGCCATTTCATTATGA+TGG 0.456007 3.3:+66645116 MS.gene022247:CDS
TAGGAGAAAACTCACTGAAA+TGG 0.458974 3.3:-66647235 None:intergenic
TTGCCAACCACACCTTACTT+AGG 0.459014 3.3:+66649473 MS.gene022247:CDS
CAAATTGCATTGTTGTAGGT+TGG 0.462781 3.3:-66647109 None:intergenic
TGGCTCCACATGAAGAATCT+GGG 0.463007 3.3:-66647154 None:intergenic
GAATAACAGTTCCTTCTGTA+TGG 0.465247 3.3:-66644530 None:intergenic
TTAAATATGTCATAATCCAT+TGG 0.467428 3.3:-66649554 None:intergenic
ATTGAACCACATTTGCATAT+GGG 0.467926 3.3:+66649890 MS.gene022247:CDS
TTTGTAGTTAAGGATTGTTA+GGG 0.470399 3.3:-66649237 None:intergenic
TTTGGTATGCAAAGAGCAGC+AGG 0.470698 3.3:+66645053 MS.gene022247:CDS
CCTGGTACATATTTCTATCA+TGG 0.478578 3.3:+66645026 MS.gene022247:CDS
TAATCCATTGGAAATCTCTC+TGG 0.486255 3.3:-66649542 None:intergenic
GTTCCCTAGCAGCTAAATAT+GGG 0.491107 3.3:+66647082 MS.gene022247:CDS
CAATGGAATGCCCAAACACC+AGG 0.492231 3.3:-66649863 None:intergenic
TCAGCTTTAATAGTTGGGCC+TGG 0.499380 3.3:-66644468 None:intergenic
TGTGAGGATTTCGGTGGCTG+TGG 0.503552 3.3:-66649371 None:intergenic
GTCCTTGGCTTCTCTCAACT+TGG 0.506872 3.3:+66647212 MS.gene022247:CDS
TGTTCGGTATCGTTCCATAA+GGG 0.510120 3.3:-66649305 None:intergenic
GATTGCTAGTACTACGTCCT+TGG 0.510808 3.3:+66647197 MS.gene022247:CDS
TCAGAATCACAAACTTATTG+TGG 0.512257 3.3:+66649055 MS.gene022247:intron
CATAAGGGTGTGACTGGTGG+TGG 0.513495 3.3:-66649290 None:intergenic
ATCGTGCGGTGTGAGGATTT+CGG 0.515283 3.3:-66649380 None:intergenic
TCAGCCCCAATGAGATGGAT+TGG 0.516747 3.3:+66645206 MS.gene022247:CDS
GCTGTATGGTTCTCTAATAG+TGG 0.517469 3.3:+66645076 MS.gene022247:CDS
ACCACATTTGCATATGGGAA+TGG 0.518745 3.3:+66649895 MS.gene022247:CDS
ATTGGAAATCTCTCTGGTGG+TGG 0.520673 3.3:-66649536 None:intergenic
CTTATTGTGGTGGAAGCAGA+TGG 0.523378 3.3:+66649068 MS.gene022247:CDS
ATCTGCTCCTTAGTGATCTG+TGG 0.529687 3.3:+66645147 MS.gene022247:CDS
CCAAATACAACTACCGGTAA+CGG 0.532128 3.3:+66649590 MS.gene022247:CDS
TCTCTTCAGCCCCAATGAGA+TGG 0.532184 3.3:+66645201 MS.gene022247:CDS
CAGAAGGAACTGTTATTCAC+TGG 0.535040 3.3:+66644535 MS.gene022247:CDS
GTTAATCCAAATACAACTAC+CGG 0.535206 3.3:+66649584 MS.gene022247:CDS
TGCTCCCATATTTAGCTGCT+AGG 0.538328 3.3:-66647086 None:intergenic
TCTCAGTGTGCTATAAATCC+AGG 0.546219 3.3:+66644716 MS.gene022247:CDS
CTGTATGGAGCTTGTTGGTG+AGG 0.546569 3.3:-66644515 None:intergenic
TCGTTCCATAAGGGTGTGAC+TGG 0.548390 3.3:-66649296 None:intergenic
GCAAACCAGTTAAATGGGAA+TGG 0.548393 3.3:+66649662 MS.gene022247:CDS
GCTCCCATATTTAGCTGCTA+GGG 0.548844 3.3:-66647085 None:intergenic
CCACATTTGCATATGGGAAT+GGG 0.550546 3.3:+66649896 MS.gene022247:CDS
ACTAGCAATCCTTATTCTGT+AGG 0.552909 3.3:-66647184 None:intergenic
CCCATTCCCATATGCAAATG+TGG 0.553246 3.3:-66649896 None:intergenic
GGTGTTAGAGGCAGAAAACC+AGG 0.555537 3.3:+66649203 MS.gene022247:CDS
ATTCATCCATGGCATTTGCA+TGG 0.556495 3.3:+66649692 MS.gene022247:CDS
CATGTTGTGATGGGAATCAA+TGG 0.556686 3.3:+66644438 MS.gene022247:CDS
GGAACTGTTATTCACTGGCA+TGG 0.556886 3.3:+66644540 MS.gene022247:CDS
CTACAACAATGCAATTTGAA+AGG 0.558037 3.3:+66647114 MS.gene022247:CDS
TGTTGTAAGGAGTACTGAGT+AGG 0.563668 3.3:-66649144 None:intergenic
CCATGATAGAAATATGTACC+AGG 0.570980 3.3:-66645026 None:intergenic
CGATGTCATCAACTGCGAAT+GGG 0.572651 3.3:-66649103 None:intergenic
TTGTGTGGAGCATGTTGTGA+TGG 0.577399 3.3:+66644428 MS.gene022247:CDS
GATCCTAAGTAAGGTGTGGT+TGG 0.579576 3.3:-66649476 None:intergenic
GAATCACAAACTTATTGTGG+TGG 0.579698 3.3:+66649058 MS.gene022247:intron
GGCCAAGTTGAGAGAAGCCA+AGG 0.580752 3.3:-66647214 None:intergenic
ATCTCATTGGGGCTGAAGAG+AGG 0.581211 3.3:-66645199 None:intergenic
ACCACCAGAGAGATTTCCAA+TGG 0.581481 3.3:+66649538 MS.gene022247:CDS
TCTAATAGTGGATTTACCAA+AGG 0.582956 3.3:+66645088 MS.gene022247:CDS
GAGATGGATTGGTGAACCAC+AGG 0.584866 3.3:+66645217 MS.gene022247:CDS
TCGATGTCATCAACTGCGAA+TGG 0.586686 3.3:-66649104 None:intergenic
ATAACTGCAGTGTTCCTCAA+AGG 0.587942 3.3:-66649797 None:intergenic
TCACTGGCATGGAATCAGAC+AGG 0.589797 3.3:+66644551 MS.gene022247:CDS
CACAAGCTCACATGAACAAG+AGG 0.595059 3.3:+66645172 MS.gene022247:CDS
TTACACGTTTCAGTTGAATG+AGG 0.598282 3.3:+66649616 MS.gene022247:CDS
GAGGAGAATCGTGCGGTGTG+AGG 0.599110 3.3:-66649387 None:intergenic
TGTGTGGAGCATGTTGTGAT+GGG 0.602225 3.3:+66644429 MS.gene022247:CDS
TGCACCCCAGATTCTTCATG+TGG 0.602253 3.3:+66647149 MS.gene022247:CDS
GGCTCCACATGAAGAATCTG+GGG 0.602686 3.3:-66647153 None:intergenic
AGGTTTAAGGCAGATAACCC+TGG 0.609626 3.3:+66649845 MS.gene022247:CDS
CAACAATGCAATTTGAAAGG+TGG 0.612313 3.3:+66647117 MS.gene022247:CDS
TCATGTCCATGCAAATGCCA+TGG 0.613062 3.3:-66649698 None:intergenic
GATGACATCGACATCTACTC+AGG 0.614053 3.3:+66649116 MS.gene022247:CDS
ATACAGATTCAAAGTTGACA+GGG 0.614232 3.3:+66644751 MS.gene022247:CDS
TTGTGTGCCACAGATCACTA+AGG 0.616013 3.3:-66645154 None:intergenic
AGCTCACATGAACAAGAGGT+TGG 0.616753 3.3:+66645176 MS.gene022247:CDS
ACCAACAAGCTCCATACAGA+AGG 0.620491 3.3:+66644519 MS.gene022247:CDS
AGCTTGCTCATCAATGGACG+AGG 0.623207 3.3:+66647048 MS.gene022247:CDS
TTCCATAAGGGTGTGACTGG+TGG 0.624649 3.3:-66649293 None:intergenic
TCCATTGGAAATCTCTCTGG+TGG 0.626333 3.3:-66649539 None:intergenic
CCTAAAGAAGCTCTTAAGTG+TGG 0.626917 3.3:+66649959 MS.gene022247:CDS
ATGGTAGTGAAATTCATCCA+TGG 0.631220 3.3:+66649681 MS.gene022247:CDS
TTCACCAATCCATCTCATTG+GGG 0.642456 3.3:-66645210 None:intergenic
GCAGCAGTTCCATCAGCCCA+AGG 0.643166 3.3:-66644689 None:intergenic
TTGGTATGCAAAGAGCAGCA+GGG 0.660158 3.3:+66645054 MS.gene022247:CDS
AATGTGGTTCAATGTGACAA+TGG 0.664380 3.3:-66649880 None:intergenic
GATTGATCCTAAGTAAGGTG+TGG 0.679397 3.3:-66649480 None:intergenic
TGTTGGTGAGGTCAATGACA+AGG 0.689203 3.3:-66644503 None:intergenic
GTGCGGTGTGAGGATTTCGG+TGG 0.702906 3.3:-66649377 None:intergenic
AATGGAATGCCCAAACACCA+GGG 0.708938 3.3:-66649862 None:intergenic
GTTGGTGAGGTCAATGACAA+GGG 0.718919 3.3:-66644502 None:intergenic
GGTGAAGGGAGATTTAGACC+AGG 0.724991 3.3:+66649740 MS.gene022247:CDS
TATTGAGGAGGAGAATCGTG+CGG 0.763434 3.3:-66649394 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAATAAAAATTGAAAATT+GGG + chr3.3:66645927-66645946 MS.gene022247:intron 10.0%
!! GATATTTAAAAAAGAATAAA+TGG - chr3.3:66647849-66647868 None:intergenic 10.0%
!! TACATATATATAATATTAAC+TGG + chr3.3:66644982-66645001 MS.gene022247:intron 10.0%
!! TAGAAATAAAAATTGAAAAT+TGG + chr3.3:66645926-66645945 MS.gene022247:intron 10.0%
!!! AAATTTTTCTACTTTTTTTT+TGG + chr3.3:66646624-66646643 MS.gene022247:intron 10.0%
!!! GTTTTATTAAAAATGTTATT+TGG - chr3.3:66648827-66648846 None:intergenic 10.0%
!!! TAAATATCATAGTTTTTTTT+TGG + chr3.3:66647861-66647880 MS.gene022247:intron 10.0%
!!! TTTATAGAATTATTTTTTGT+TGG - chr3.3:66648224-66648243 None:intergenic 10.0%
!! ACTATATTATCATTCATAAA+AGG - chr3.3:66647007-66647026 None:intergenic 15.0%
!! ATATTTAATTATAACTAGAC+TGG - chr3.3:66644617-66644636 None:intergenic 15.0%
!! CTTAAAAAAAAAATATGAAC+TGG + chr3.3:66646598-66646617 MS.gene022247:intron 15.0%
!! GTTTAATATATAAAGATAGT+GGG - chr3.3:66646163-66646182 None:intergenic 15.0%
!! TATATAATATAATTAGAGCT+AGG + chr3.3:66644959-66644978 MS.gene022247:intron 15.0%
!! TATATATAATATTAACTGGT+TGG + chr3.3:66644986-66645005 MS.gene022247:intron 15.0%
!! TGTTTAATATATAAAGATAG+TGG - chr3.3:66646164-66646183 None:intergenic 15.0%
!! TTGTCTTGATTAAAATTTAA+AGG - chr3.3:66646747-66646766 None:intergenic 15.0%
!!! AAAAAAACTTTAACTTCAAT+AGG + chr3.3:66647819-66647838 MS.gene022247:intron 15.0%
!!! AGTATTATTTTTCATTCTTT+TGG + chr3.3:66646865-66646884 MS.gene022247:intron 15.0%
!!! TATTTTGCATATCATTATTA+GGG + chr3.3:66647374-66647393 MS.gene022247:intron 15.0%
!!! TTGAAAAAATGTTTTAGATA+TGG + chr3.3:66647685-66647704 MS.gene022247:intron 15.0%
!!! TTTAATAAAAGTACCTATTA+AGG + chr3.3:66646076-66646095 MS.gene022247:intron 15.0%
!!! TTTATTACTTTTTTAAACGT+GGG + chr3.3:66646277-66646296 MS.gene022247:intron 15.0%
!!! TTTTAAAGCATAATAACTTT+TGG + chr3.3:66645692-66645711 MS.gene022247:intron 15.0%
!!! TTTTATTACTTTTTTAAACG+TGG + chr3.3:66646276-66646295 MS.gene022247:intron 15.0%
!! AAAAAAAAAATTGACAAGTG+GGG - chr3.3:66646535-66646554 None:intergenic 20.0%
!! AAAACAAATCATTTCCAAAA+TGG + chr3.3:66649343-66649362 MS.gene022247:CDS 20.0%
!! AAACAAATCATTTCCAAAAT+GGG + chr3.3:66649344-66649363 MS.gene022247:CDS 20.0%
!! AACATATATCATATATGTAG+TGG - chr3.3:66647269-66647288 None:intergenic 20.0%
!! AACTTCACGTTAAATTATTT+AGG + chr3.3:66648659-66648678 MS.gene022247:intron 20.0%
!! AATTGTAAGTTAATATGAAC+TGG + chr3.3:66646696-66646715 MS.gene022247:intron 20.0%
!! ACATATATCATATATGTAGT+GGG - chr3.3:66647268-66647287 None:intergenic 20.0%
!! ACATCATATTCATATGAAAA+AGG - chr3.3:66645845-66645864 None:intergenic 20.0%
!! ATACATTCAAATAAATGAAG+CGG + chr3.3:66648196-66648215 MS.gene022247:intron 20.0%
!! ATCGTAGGAATTAAAAATTA+AGG + chr3.3:66647757-66647776 MS.gene022247:intron 20.0%
!! CGAATTAAATATTGTTTCAT+TGG + chr3.3:66648616-66648635 MS.gene022247:intron 20.0%
!! GAAAAAAAAAATTGACAAGT+GGG - chr3.3:66646536-66646555 None:intergenic 20.0%
!! GAAAACGAATGAAATAATTT+AGG + chr3.3:66647589-66647608 MS.gene022247:intron 20.0%
!! GAAAAGTTGAATTTAAATCT+TGG + chr3.3:66648681-66648700 MS.gene022247:intron 20.0%
!! TGAAAAAAAAAATTGACAAG+TGG - chr3.3:66646537-66646556 None:intergenic 20.0%
!! TGAAATAATGAATCAATCTA+TGG - chr3.3:66649002-66649021 None:intergenic 20.0%
!! TGTTCAATTAGTTGTTATAT+TGG + chr3.3:66648042-66648061 MS.gene022247:intron 20.0%
!! TTAAATATGTCATAATCCAT+TGG - chr3.3:66649557-66649576 None:intergenic 20.0%
!! TTAAATATTGTTTCATTGGT+TGG + chr3.3:66648620-66648639 MS.gene022247:intron 20.0%
!! TTCATCATTATCACATTTAA+AGG - chr3.3:66648271-66648290 None:intergenic 20.0%
!!! ATATCATAGTTTTTTTTTGG+TGG + chr3.3:66647864-66647883 MS.gene022247:intron 20.0%
!!! CAATTGATTCCTTTTTTATT+TGG - chr3.3:66647506-66647525 None:intergenic 20.0%
!!! CATATTTAAGTACTTTTCAT+TGG - chr3.3:66646139-66646158 None:intergenic 20.0%
!!! CATTTAGATTTAGAATATCT+TGG - chr3.3:66648884-66648903 None:intergenic 20.0%
!!! CTATTTTGCATATCATTATT+AGG + chr3.3:66647373-66647392 MS.gene022247:intron 20.0%
!!! TATTACTCATTTTTACAAGT+GGG + chr3.3:66646197-66646216 MS.gene022247:intron 20.0%
!!! TTAAATGTGATAATGATGAA+CGG + chr3.3:66648271-66648290 MS.gene022247:intron 20.0%
! AAAAAAAAATTGACAAGTGG+GGG - chr3.3:66646534-66646553 None:intergenic 25.0%
! AAAATGCAAACCAGTTAAAT+GGG + chr3.3:66649657-66649676 MS.gene022247:CDS 25.0%
! AAGACAATAGAAATATGAAC+TGG + chr3.3:66646571-66646590 MS.gene022247:intron 25.0%
! AATCAATTGTCGACATAATA+AGG + chr3.3:66647517-66647536 MS.gene022247:intron 25.0%
! AATTAGTTGTTATATTGGAG+GGG + chr3.3:66648047-66648066 MS.gene022247:intron 25.0%
! AATTGAGATGAGCATATATT+TGG - chr3.3:66647423-66647442 None:intergenic 25.0%
! AATTTGATTGATCCTAAGTA+AGG - chr3.3:66649488-66649507 None:intergenic 25.0%
! AGTGTAAAAGTTTCTTTACA+AGG - chr3.3:66645417-66645436 None:intergenic 25.0%
! AGTTGAATTTAAATCTTGGT+TGG + chr3.3:66648685-66648704 MS.gene022247:intron 25.0%
! ATAAAGCCAAATGTTAGTAT+AGG + chr3.3:66648016-66648035 MS.gene022247:intron 25.0%
! ATTATTAGGTATTAGGTGAA+TGG - chr3.3:66645974-66645993 None:intergenic 25.0%
! CAATTAGTTGTTATATTGGA+GGG + chr3.3:66648046-66648065 MS.gene022247:intron 25.0%
! CTCAATACACAAAACAAAAT+CGG + chr3.3:66649410-66649429 MS.gene022247:CDS 25.0%
! CTGAAACAAACAGAAATTAT+GGG - chr3.3:66649039-66649058 None:intergenic 25.0%
! CTTAGGAATTATTAGGTATT+AGG - chr3.3:66645981-66646000 None:intergenic 25.0%
! GACAATGCATAATATATACA+AGG - chr3.3:66647908-66647927 None:intergenic 25.0%
! GAGATTAATAGTCTAATTCA+TGG + chr3.3:66647567-66647586 MS.gene022247:intron 25.0%
! GTAAGAAAAACTTCACTAAT+AGG + chr3.3:66647638-66647657 MS.gene022247:intron 25.0%
! GTAATAAAATGTGTACTACT+TGG - chr3.3:66646224-66646243 None:intergenic 25.0%
! TACTATTCCATTATCTTTCT+TGG - chr3.3:66646849-66646868 None:intergenic 25.0%
! TATTACTTCTTTATGCAAGT+GGG + chr3.3:66646238-66646257 MS.gene022247:intron 25.0%
! TCAATTAGTTGTTATATTGG+AGG + chr3.3:66648045-66648064 MS.gene022247:intron 25.0%
! TGAAACAAACAGAAATTATG+GGG - chr3.3:66649038-66649057 None:intergenic 25.0%
! TGAAATAATTTAGGAACAGT+AGG + chr3.3:66647598-66647617 MS.gene022247:intron 25.0%
! TGAATTAGACTATTAATCTC+CGG - chr3.3:66647567-66647586 None:intergenic 25.0%
! TGCATAATATATACAAGGTT+CGG - chr3.3:66647903-66647922 None:intergenic 25.0%
! TTATTACTTCTTTATGCAAG+TGG + chr3.3:66646237-66646256 MS.gene022247:intron 25.0%
! TTATTAGGTATTAGGTGAAT+GGG - chr3.3:66645973-66645992 None:intergenic 25.0%
! TTTGTAGTTAAGGATTGTTA+GGG - chr3.3:66649240-66649259 None:intergenic 25.0%
!! CTTTCAAGAATTTTATTGTC+TGG - chr3.3:66645882-66645901 None:intergenic 25.0%
!! TAACTTCAGCTTTAATAGTT+GGG - chr3.3:66644476-66644495 None:intergenic 25.0%
!! TCGTTGGAATTTTTCTATAA+TGG + chr3.3:66646489-66646508 MS.gene022247:intron 25.0%
!! TCTGAAACAAACAGAAATTA+TGG - chr3.3:66649040-66649059 None:intergenic 25.0%
!! TCTTTTGGTAAATGTACAAT+TGG + chr3.3:66646880-66646899 MS.gene022247:intron 25.0%
!! TTAACTTCAGCTTTAATAGT+TGG - chr3.3:66644477-66644496 None:intergenic 25.0%
!! TTTTGTAGTTAAGGATTGTT+AGG - chr3.3:66649241-66649260 None:intergenic 25.0%
!!! AAAGCCAGTAGTTTTTTTTA+GGG - chr3.3:66649178-66649197 None:intergenic 25.0%
!!! AGTTTTAAAGTTGTCATGAT+CGG + chr3.3:66645534-66645553 MS.gene022247:intron 25.0%
!!! CTATTACTCATTTTTACAAG+TGG + chr3.3:66646196-66646215 MS.gene022247:intron 25.0%
!!! TATTTCTATCATGGACATTT+TGG + chr3.3:66645035-66645054 MS.gene022247:CDS 25.0%
!!! TCACAAATAAAGAGTATCAT+TGG - chr3.3:66645795-66645814 None:intergenic 25.0%
!!! TCTTTTCCTTATTTTATACG+AGG - chr3.3:66648399-66648418 None:intergenic 25.0%
!!! TGATTCCTTTTTTATTTGGT+GGG - chr3.3:66647502-66647521 None:intergenic 25.0%
!!! TTACTTTTAAGAGGAAATTC+CGG + chr3.3:66647545-66647564 MS.gene022247:intron 25.0%
!!! TTGATTCCTTTTTTATTTGG+TGG - chr3.3:66647503-66647522 None:intergenic 25.0%
AAATCGGTAGTTTCACTAAA+TGG + chr3.3:66649426-66649445 MS.gene022247:CDS 30.0%
AACAAAAGAAAAACCATTGC+TGG - chr3.3:66644899-66644918 None:intergenic 30.0%
AACTCACCATCATAATGAAA+TGG - chr3.3:66645125-66645144 None:intergenic 30.0%
AAGACCCTAAAAAAAACTAC+TGG + chr3.3:66649171-66649190 MS.gene022247:CDS 30.0%
AATACAGATTCAAAGTTGAC+AGG + chr3.3:66644750-66644769 MS.gene022247:CDS 30.0%
AATCGGTAGTTTCACTAAAT+GGG + chr3.3:66649427-66649446 MS.gene022247:CDS 30.0%
AATCTAAATGCATGATGCTT+TGG + chr3.3:66648894-66648913 MS.gene022247:intron 30.0%
AATCTGACTATCCAATTATG+GGG + chr3.3:66648726-66648745 MS.gene022247:intron 30.0%
AATTAATCAACATGTAGCAG+TGG - chr3.3:66644837-66644856 None:intergenic 30.0%
AATTGTCGACATAATAAGGA+AGG + chr3.3:66647521-66647540 MS.gene022247:intron 30.0%
ACAATCTGACTATCCAATTA+TGG + chr3.3:66648724-66648743 MS.gene022247:intron 30.0%
ACATCTCCTATACTAACATT+TGG - chr3.3:66648025-66648044 None:intergenic 30.0%
ACTGCAGTTATATTTCCATA+TGG + chr3.3:66649809-66649828 MS.gene022247:CDS 30.0%
ATACAGATTCAAAGTTGACA+GGG + chr3.3:66644751-66644770 MS.gene022247:CDS 30.0%
ATAGACACACACAAACTAAT+TGG - chr3.3:66647357-66647376 None:intergenic 30.0%
ATCTAAATGCATGATGCTTT+GGG + chr3.3:66648895-66648914 MS.gene022247:intron 30.0%
ATTAGTTGTTATATTGGAGG+GGG + chr3.3:66648048-66648067 MS.gene022247:intron 30.0%
ATTGAACCACATTTGCATAT+GGG + chr3.3:66649890-66649909 MS.gene022247:CDS 30.0%
CAAAAAAGACCTACAGAATA+AGG + chr3.3:66647175-66647194 MS.gene022247:CDS 30.0%
CAAAATGCAAACCAGTTAAA+TGG + chr3.3:66649656-66649675 MS.gene022247:CDS 30.0%
CAACGATGATTTGATGAAAT+GGG - chr3.3:66646475-66646494 None:intergenic 30.0%
CAATCTGACTATCCAATTAT+GGG + chr3.3:66648725-66648744 MS.gene022247:intron 30.0%
CAGTTATATTTCCATATGGT+TGG + chr3.3:66649813-66649832 MS.gene022247:CDS 30.0%
CATCTCAATTATCACCATTT+AGG + chr3.3:66647433-66647452 MS.gene022247:intron 30.0%
CATGCATGTATGATAAAATG+GGG - chr3.3:66648544-66648563 None:intergenic 30.0%
CTACAACAATGCAATTTGAA+AGG + chr3.3:66647114-66647133 MS.gene022247:CDS 30.0%
CTGTAAAAATGTTTGCAGTT+TGG + chr3.3:66644662-66644681 MS.gene022247:intron 30.0%
CTTTCAAATTGCATTGTTGT+AGG - chr3.3:66647116-66647135 None:intergenic 30.0%
CTTTGTTAGTGTATTGTCAT+TGG - chr3.3:66646113-66646132 None:intergenic 30.0%
GCATAATATATACAAGGTTC+GGG - chr3.3:66647902-66647921 None:intergenic 30.0%
GCATGCATGTATGATAAAAT+GGG - chr3.3:66648545-66648564 None:intergenic 30.0%
GCCAAATTTATGTCTATAGA+GGG + chr3.3:66648492-66648511 MS.gene022247:intron 30.0%
GTAGTTGTATTTGGATTAAC+TGG - chr3.3:66649584-66649603 None:intergenic 30.0%
GTTAATCCAAATACAACTAC+CGG + chr3.3:66649584-66649603 MS.gene022247:CDS 30.0%
TCAGAATCACAAACTTATTG+TGG + chr3.3:66649055-66649074 MS.gene022247:intron 30.0%
TCCCTCTATAGACATAAATT+TGG - chr3.3:66648496-66648515 None:intergenic 30.0%
TGCAATTCAAGGAATGATAT+GGG - chr3.3:66648979-66648998 None:intergenic 30.0%
TGCATGCATGTATGATAAAA+TGG - chr3.3:66648546-66648565 None:intergenic 30.0%
TGCCAAATTTATGTCTATAG+AGG + chr3.3:66648491-66648510 MS.gene022247:intron 30.0%
TTATAACTAGACTGGTACTT+TGG - chr3.3:66644609-66644628 None:intergenic 30.0%
TTGTTCCCACCAAATAAAAA+AGG + chr3.3:66647494-66647513 MS.gene022247:intron 30.0%
! AAAAGTTGAAAGTATACCTG+TGG - chr3.3:66645236-66645255 None:intergenic 30.0%
! AATTGTCGCATCAATTGTTT+TGG + chr3.3:66648106-66648125 MS.gene022247:intron 30.0%
! ATTTGCATGGACATGATTTT+TGG + chr3.3:66649705-66649724 MS.gene022247:CDS 30.0%
! TTTGCATGGACATGATTTTT+GGG + chr3.3:66649706-66649725 MS.gene022247:CDS 30.0%
!! AAAAACTACTGGCTTTCAAT+TGG + chr3.3:66649182-66649201 MS.gene022247:CDS 30.0%
!! AAGGAAGGTTTACTTTTAAG+AGG + chr3.3:66647536-66647555 MS.gene022247:intron 30.0%
!! AGGTAAATTCTTAGTTCTAG+TGG + chr3.3:66644571-66644590 MS.gene022247:intron 30.0%
!! CAGAGATTGTTTTGTAGTTA+AGG - chr3.3:66649250-66649269 None:intergenic 30.0%
!! TAACTGGTTGGTGTTAAATA+TGG + chr3.3:66644998-66645017 MS.gene022247:intron 30.0%
!! TCTAATAGTGGATTTACCAA+AGG + chr3.3:66645088-66645107 MS.gene022247:CDS 30.0%
!!! AGCTTTATTTTGACGCAAAA+AGG + chr3.3:66646915-66646934 MS.gene022247:intron 30.0%
!!! AGTAGTTTTTTTTAGGGTCT+TGG - chr3.3:66649172-66649191 None:intergenic 30.0%
!!! CGATTTTGTTTTGTGTATTG+AGG - chr3.3:66649412-66649431 None:intergenic 30.0%
!!! CTTATTCTGTAGGTCTTTTT+TGG - chr3.3:66647177-66647196 None:intergenic 30.0%
!!! GAAAGCCAGTAGTTTTTTTT+AGG - chr3.3:66649179-66649198 None:intergenic 30.0%
!!! GCAATTCTGATTGTTTTGAT+TGG + chr3.3:66648151-66648170 MS.gene022247:intron 30.0%
!!! GCTTTATTTTGACGCAAAAA+GGG + chr3.3:66646916-66646935 MS.gene022247:intron 30.0%
!!! TTTTGTTTTGTGTATTGAGG+AGG - chr3.3:66649409-66649428 None:intergenic 30.0%
!!! TTTTTTATTTGGTGGGAACA+AGG - chr3.3:66647495-66647514 None:intergenic 30.0%
AAACCACTTGAAAAAGACGA+AGG + chr3.3:66648358-66648377 MS.gene022247:intron 35.0%
AAAGAACGGGCAACTATATA+AGG - chr3.3:66646332-66646351 None:intergenic 35.0%
AAATAAGTGATGTGTCACGT+GGG - chr3.3:66646049-66646068 None:intergenic 35.0%
AATGGGGTCTTTACTTAACA+AGG - chr3.3:66646408-66646427 None:intergenic 35.0%
AATGTGGTTCAATGTGACAA+TGG - chr3.3:66649883-66649902 None:intergenic 35.0%
ACAATGGTAGTTTCCTAACA+AGG + chr3.3:66646008-66646027 MS.gene022247:intron 35.0%
ACTAGCAATCCTTATTCTGT+AGG - chr3.3:66647187-66647206 None:intergenic 35.0%
AGAGAGCCATTTCATTATGA+TGG + chr3.3:66645116-66645135 MS.gene022247:CDS 35.0%
AGATTTGAATCACATGAGTG+GGG + chr3.3:66648294-66648313 MS.gene022247:intron 35.0%
ATACAAAAAGCCAGATTGTG+TGG + chr3.3:66644413-66644432 MS.gene022247:CDS 35.0%
CAAATTGCATTGTTGTAGGT+TGG - chr3.3:66647112-66647131 None:intergenic 35.0%
CAACAATGCAATTTGAAAGG+TGG + chr3.3:66647117-66647136 MS.gene022247:CDS 35.0%
CACTAATAGGTCAAAGAAGT+TGG + chr3.3:66647651-66647670 MS.gene022247:intron 35.0%
CATGTTGATCTAACAAACCA+TGG - chr3.3:66648781-66648800 None:intergenic 35.0%
CATTGAACCACATTTGCATA+TGG + chr3.3:66649889-66649908 MS.gene022247:CDS 35.0%
CCAACGATGATTTGATGAAA+TGG - chr3.3:66646476-66646495 None:intergenic 35.0%
CCATGATAGAAATATGTACC+AGG - chr3.3:66645029-66645048 None:intergenic 35.0%
CCATTTCATCAAATCATCGT+TGG + chr3.3:66646473-66646492 MS.gene022247:intron 35.0%
CTACGATTCTGCACATTAAA+CGG - chr3.3:66647744-66647763 None:intergenic 35.0%
CTGTATTGAAAAGTTTCTCC+TGG - chr3.3:66644737-66644756 None:intergenic 35.0%
GAAATGCAATAATCAGCAGT+AGG - chr3.3:66648956-66648975 None:intergenic 35.0%
GAATAACAGTTCCTTCTGTA+TGG - chr3.3:66644533-66644552 None:intergenic 35.0%
GAATCACAAACTTATTGTGG+TGG + chr3.3:66649058-66649077 MS.gene022247:intron 35.0%
GACAGTACCAAGAAAGATAA+TGG + chr3.3:66646839-66646858 MS.gene022247:intron 35.0%
GAGATTTGAATCACATGAGT+GGG + chr3.3:66648293-66648312 MS.gene022247:intron 35.0%
GATGAGCATATATTTGGATG+TGG - chr3.3:66647417-66647436 None:intergenic 35.0%
GCAATTCAAGGAATGATATG+GGG - chr3.3:66648978-66648997 None:intergenic 35.0%
GGATGCTCTTAGGAATTATT+AGG - chr3.3:66645988-66646007 None:intergenic 35.0%
GTGCAATTCAAGGAATGATA+TGG - chr3.3:66648980-66648999 None:intergenic 35.0%
TAAATAAGTGATGTGTCACG+TGG - chr3.3:66646050-66646069 None:intergenic 35.0%
TAACTGAGATGCATAGTGAT+TGG + chr3.3:66648428-66648447 MS.gene022247:intron 35.0%
TAATCCATTGGAAATCTCTC+TGG - chr3.3:66649545-66649564 None:intergenic 35.0%
TAGGAGAAAACTCACTGAAA+TGG - chr3.3:66647238-66647257 None:intergenic 35.0%
TATAGTTGCCCGTTCTTTAA+CGG + chr3.3:66646334-66646353 MS.gene022247:intron 35.0%
TCAATCTATGGTGCAATTCA+AGG - chr3.3:66648990-66649009 None:intergenic 35.0%
TGGAGTCCTCGTATAAAATA+AGG + chr3.3:66648390-66648409 MS.gene022247:intron 35.0%
TTACACGTTTCAGTTGAATG+AGG + chr3.3:66649616-66649635 MS.gene022247:CDS 35.0%
TTATGAGACAGCTACCTAAA+TGG - chr3.3:66647450-66647469 None:intergenic 35.0%
TTGGACTGCATTAAGGTTTA+AGG + chr3.3:66649832-66649851 MS.gene022247:CDS 35.0%
TTGTTAAGTAAAGACCCCAT+TGG + chr3.3:66646407-66646426 MS.gene022247:intron 35.0%
TTGTTAGGAAACTACCATTG+TGG - chr3.3:66646009-66646028 None:intergenic 35.0%
! AAACTTTTCTCATCAACACC+TGG - chr3.3:66649761-66649780 None:intergenic 35.0%
! AATTTTTCTTCCTCCAATGG+AGG + chr3.3:66646363-66646382 MS.gene022247:intron 35.0%
! ACTATTAGAGCATCTCCAAT+GGG - chr3.3:66646425-66646444 None:intergenic 35.0%
! ATGGTAGTGAAATTCATCCA+TGG + chr3.3:66649681-66649700 MS.gene022247:CDS 35.0%
! ATTTTTCTTCCTCCAATGGA+GGG + chr3.3:66646364-66646383 MS.gene022247:intron 35.0%
! CCTGGTACATATTTCTATCA+TGG + chr3.3:66645026-66645045 MS.gene022247:CDS 35.0%
! CTCAATTTTTCTTCCTCCAA+TGG + chr3.3:66646360-66646379 MS.gene022247:intron 35.0%
! TGCTGAAAGCAGTTTTTGTT+TGG + chr3.3:66644319-66644338 MS.gene022247:CDS 35.0%
! TGGTAATGTTGGAAAAACTG+AGG - chr3.3:66649273-66649292 None:intergenic 35.0%
!! TTGTTTGGTGCATATGGTTA+GGG + chr3.3:66644334-66644353 MS.gene022247:CDS 35.0%
!! TTTGTTTGGTGCATATGGTT+AGG + chr3.3:66644333-66644352 MS.gene022247:CDS 35.0%
!!! AATGGGTGTTATTTTTGCTG+AGG + chr3.3:66649913-66649932 MS.gene022247:CDS 35.0%
!!! ATAGTTTTTTTTTGGTGGCC+AGG + chr3.3:66647869-66647888 MS.gene022247:intron 35.0%
!!! CAGTTTTTGTTTGGTGCATA+TGG + chr3.3:66644328-66644347 MS.gene022247:CDS 35.0%
!!! GATTTTTGGGTTTTGGGATA+TGG + chr3.3:66649719-66649738 MS.gene022247:CDS 35.0%
!!! GGACATGATTTTTGGGTTTT+GGG + chr3.3:66649713-66649732 MS.gene022247:CDS 35.0%
!!! TAGTTTTTTTTTGGTGGCCA+GGG + chr3.3:66647870-66647889 MS.gene022247:intron 35.0%
!!! TGGACATGATTTTTGGGTTT+TGG + chr3.3:66649712-66649731 MS.gene022247:CDS 35.0%
!!! TTCGTCTTTTTCAAGTGGTT+TGG - chr3.3:66648359-66648378 None:intergenic 35.0%
!!! TTTTAGAGCTTGCTCATCAA+TGG + chr3.3:66647042-66647061 MS.gene022247:intron 35.0%
AAAAAATTGACAAGTGGGGG+TGG - chr3.3:66646531-66646550 None:intergenic 40.0%
AAAATAAAGCTAACACCGCG+TGG - chr3.3:66646906-66646925 None:intergenic 40.0%
AAACGTGTAAACACCGTTAC+CGG - chr3.3:66649606-66649625 None:intergenic 40.0%
AAGAAAAACCATTGCTGGCA+TGG - chr3.3:66644894-66644913 None:intergenic 40.0%
AAGCACTAATGCTCATATGG+TGG - chr3.3:66645821-66645840 None:intergenic 40.0%
AATAAGTGATGTGTCACGTG+GGG - chr3.3:66646048-66646067 None:intergenic 40.0%
AATGGCTCTCTTTGTTCCTT+TGG - chr3.3:66645107-66645126 None:intergenic 40.0%
ACCACATTTGCATATGGGAA+TGG + chr3.3:66649895-66649914 MS.gene022247:CDS 40.0%
AGCAGTGGAAACAGAAAAAG+AGG - chr3.3:66644822-66644841 None:intergenic 40.0%
ATAACTGCAGTGTTCCTCAA+AGG - chr3.3:66649800-66649819 None:intergenic 40.0%
ATAGTTGCCCGTTCTTTAAC+GGG + chr3.3:66646335-66646354 MS.gene022247:intron 40.0%
ATATATGTCCATGCCAGCAA+TGG + chr3.3:66644883-66644902 MS.gene022247:intron 40.0%
ATTCATCCATGGCATTTGCA+TGG + chr3.3:66649692-66649711 MS.gene022247:CDS 40.0%
ATTGAGTCCCCGTTAAAGAA+CGG - chr3.3:66646346-66646365 None:intergenic 40.0%
CACTACCATTCCCATTTAAC+TGG - chr3.3:66649670-66649689 None:intergenic 40.0%
CAGAAGGAACTGTTATTCAC+TGG + chr3.3:66644535-66644554 MS.gene022247:CDS 40.0%
CATATGGTTGGACTGCATTA+AGG + chr3.3:66649825-66649844 MS.gene022247:CDS 40.0%
CATTGGAGATGCTCTAATAG+TGG + chr3.3:66646424-66646443 MS.gene022247:intron 40.0%
CCAAATACAACTACCGGTAA+CGG + chr3.3:66649590-66649609 MS.gene022247:CDS 40.0%
CCACACTTAAGAGCTTCTTT+AGG - chr3.3:66649962-66649981 None:intergenic 40.0%
CCACATTTGCATATGGGAAT+GGG + chr3.3:66649896-66649915 MS.gene022247:CDS 40.0%
CCATTTAAGGAGTCCTTGTT+AGG - chr3.3:66646024-66646043 None:intergenic 40.0%
CCTAAAGAAGCTCTTAAGTG+TGG + chr3.3:66649959-66649978 MS.gene022247:CDS 40.0%
CCTAACAAGGACTCCTTAAA+TGG + chr3.3:66646021-66646040 MS.gene022247:intron 40.0%
CGTTTAATGTGCAGAATCGT+AGG + chr3.3:66647742-66647761 MS.gene022247:intron 40.0%
CTGAGGCTGTTCATAAAGTT+AGG + chr3.3:66649930-66649949 MS.gene022247:CDS 40.0%
CTTAATGCAGTCCAACCATA+TGG - chr3.3:66649827-66649846 None:intergenic 40.0%
GAAAACAACTCACACTCATG+TGG + chr3.3:66645901-66645920 MS.gene022247:intron 40.0%
GATTGATCCTAAGTAAGGTG+TGG - chr3.3:66649483-66649502 None:intergenic 40.0%
GCAAACCAGTTAAATGGGAA+TGG + chr3.3:66649662-66649681 MS.gene022247:CDS 40.0%
GCATAGAAAACCTTGCAACT+AGG + chr3.3:66646446-66646465 MS.gene022247:intron 40.0%
GCTGTATGGTTCTCTAATAG+TGG + chr3.3:66645076-66645095 MS.gene022247:CDS 40.0%
GGAGATTTGAATCACATGAG+TGG + chr3.3:66648292-66648311 MS.gene022247:intron 40.0%
GGAGTCATTGAGTCCTTAAT+AGG - chr3.3:66646092-66646111 None:intergenic 40.0%
GTTCACCAATCCATCTCATT+GGG - chr3.3:66645214-66645233 None:intergenic 40.0%
GTTCCCTAGCAGCTAAATAT+GGG + chr3.3:66647082-66647101 MS.gene022247:CDS 40.0%
TAAATGTACAATTGGCCACG+CGG + chr3.3:66646888-66646907 MS.gene022247:intron 40.0%
TAGAAAACCTTGCAACTAGG+TGG + chr3.3:66646449-66646468 MS.gene022247:intron 40.0%
TATGGGGACCAAATTGGATT+GGG + chr3.3:66648742-66648761 MS.gene022247:intron 40.0%
TCCAATTATGGGGACCAAAT+TGG + chr3.3:66648736-66648755 MS.gene022247:intron 40.0%
TCCAATTTGGTCCCCATAAT+TGG - chr3.3:66648740-66648759 None:intergenic 40.0%
TCTCAGTGTGCTATAAATCC+AGG + chr3.3:66644716-66644735 MS.gene022247:CDS 40.0%
TGAGATGCATAGTGATTGGT+CGG + chr3.3:66648432-66648451 MS.gene022247:intron 40.0%
TGTTCCCTAGCAGCTAAATA+TGG + chr3.3:66647081-66647100 MS.gene022247:CDS 40.0%
TGTTCGGTATCGTTCCATAA+GGG - chr3.3:66649308-66649327 None:intergenic 40.0%
TTAAGGATTGTTAGGGCTTG+TGG - chr3.3:66649233-66649252 None:intergenic 40.0%
TTATGGGGACCAAATTGGAT+TGG + chr3.3:66648741-66648760 MS.gene022247:intron 40.0%
TTCACCAATCCATCTCATTG+GGG - chr3.3:66645213-66645232 None:intergenic 40.0%
! ATCACATTTTTGACCCCAAG+TGG + chr3.3:66644859-66644878 MS.gene022247:intron 40.0%
! ATGGACATATATGCCACTTG+GGG - chr3.3:66644875-66644894 None:intergenic 40.0%
! CACTATTAGAGCATCTCCAA+TGG - chr3.3:66646426-66646445 None:intergenic 40.0%
! CATGGACATATATGCCACTT+GGG - chr3.3:66644876-66644895 None:intergenic 40.0%
! CATGTTGTGATGGGAATCAA+TGG + chr3.3:66644438-66644457 MS.gene022247:CDS 40.0%
! CTATTAGAGCATCTCCAATG+GGG - chr3.3:66646424-66646443 None:intergenic 40.0%
! TGTGAATGCTTTGCTGTGTT+CGG - chr3.3:66649324-66649343 None:intergenic 40.0%
! TTTGCAGTTTGGAACTCCTT+GGG + chr3.3:66644673-66644692 MS.gene022247:intron 40.0%
!! ATATGTAGTGGGTCATAGCT+AGG - chr3.3:66647257-66647276 None:intergenic 40.0%
!! ATTCCTAAGAGCATCCACAA+TGG + chr3.3:66645992-66646011 MS.gene022247:intron 40.0%
!! GGAAAGCACTAATGCTCATA+TGG - chr3.3:66645824-66645843 None:intergenic 40.0%
!! TGGCTTTCAATTGGTGTTAG+AGG + chr3.3:66649191-66649210 MS.gene022247:CDS 40.0%
!! TGTTGTAAGGAGTACTGAGT+AGG - chr3.3:66649147-66649166 None:intergenic 40.0%
AAAGACGAAGGACCACGTTA+TGG + chr3.3:66648370-66648389 MS.gene022247:intron 45.0%
AATGGAATGCCCAAACACCA+GGG - chr3.3:66649865-66649884 None:intergenic 45.0%
ACAACATGCTCCACACAATC+TGG - chr3.3:66644426-66644445 None:intergenic 45.0%
ACCAACAAGCTCCATACAGA+AGG + chr3.3:66644519-66644538 MS.gene022247:CDS 45.0%
ACCACCAGAGAGATTTCCAA+TGG + chr3.3:66649538-66649557 MS.gene022247:CDS 45.0%
AGCTCACATGAACAAGAGGT+TGG + chr3.3:66645176-66645195 MS.gene022247:CDS 45.0%
ATCTGCTCCTTAGTGATCTG+TGG + chr3.3:66645147-66645166 MS.gene022247:CDS 45.0%
ATTGGAAATCTCTCTGGTGG+TGG - chr3.3:66649539-66649558 None:intergenic 45.0%
ATTTGACACGTGCACCTTTG+AGG + chr3.3:66649783-66649802 MS.gene022247:CDS 45.0%
CACAAGCTCACATGAACAAG+AGG + chr3.3:66645172-66645191 MS.gene022247:CDS 45.0%
CATTAAACGGCTACTTGAGC+TGG - chr3.3:66647731-66647750 None:intergenic 45.0%
CCAACTGAGCTTAACTCACA+AGG + chr3.3:66647932-66647951 MS.gene022247:intron 45.0%
CCCATTCCCATATGCAAATG+TGG - chr3.3:66649899-66649918 None:intergenic 45.0%
CCGTTACCGGTAGTTGTATT+TGG - chr3.3:66649593-66649612 None:intergenic 45.0%
CCTTGTGAGTTAAGCTCAGT+TGG - chr3.3:66647935-66647954 None:intergenic 45.0%
CGATGTCATCAACTGCGAAT+GGG - chr3.3:66649106-66649125 None:intergenic 45.0%
CTACCATTGTGGATGCTCTT+AGG - chr3.3:66645998-66646017 None:intergenic 45.0%
GATCCTAAGTAAGGTGTGGT+TGG - chr3.3:66649479-66649498 None:intergenic 45.0%
GATGACATCGACATCTACTC+AGG + chr3.3:66649116-66649135 MS.gene022247:CDS 45.0%
GATTGCTAGTACTACGTCCT+TGG + chr3.3:66647197-66647216 MS.gene022247:CDS 45.0%
GCATGGACATATATGCCACT+TGG - chr3.3:66644877-66644896 None:intergenic 45.0%
GCTCCCATATTTAGCTGCTA+GGG - chr3.3:66647088-66647107 None:intergenic 45.0%
GGAACTGTTATTCACTGGCA+TGG + chr3.3:66644540-66644559 MS.gene022247:CDS 45.0%
GGTTCACCAATCCATCTCAT+TGG - chr3.3:66645215-66645234 None:intergenic 45.0%
GTGTTAAATATGGTGCAGCC+TGG + chr3.3:66645008-66645027 MS.gene022247:intron 45.0%
GTGTTCGGTATCGTTCCATA+AGG - chr3.3:66649309-66649328 None:intergenic 45.0%
TAATAGTTGGGCCTGGAAAC+TGG - chr3.3:66644464-66644483 None:intergenic 45.0%
TAGAGGGAATCACATCTTGC+AGG + chr3.3:66648508-66648527 MS.gene022247:intron 45.0%
TAGGGTCTTGGTCTGTTGTA+AGG - chr3.3:66649160-66649179 None:intergenic 45.0%
TAGTTGCCCGTTCTTTAACG+GGG + chr3.3:66646336-66646355 MS.gene022247:intron 45.0%
TATACGAGGACTCCATAACG+TGG - chr3.3:66648385-66648404 None:intergenic 45.0%
TATTGAGGAGGAGAATCGTG+CGG - chr3.3:66649397-66649416 None:intergenic 45.0%
TCATGTCCATGCAAATGCCA+TGG - chr3.3:66649701-66649720 None:intergenic 45.0%
TCCATTGGAAATCTCTCTGG+TGG - chr3.3:66649542-66649561 None:intergenic 45.0%
TCCTTCTGTATGGAGCTTGT+TGG - chr3.3:66644523-66644542 None:intergenic 45.0%
TCGATGTCATCAACTGCGAA+TGG - chr3.3:66649107-66649126 None:intergenic 45.0%
TCTCTCTCCTGGGTAACTAA+CGG - chr3.3:66646305-66646324 None:intergenic 45.0%
TGAGCACACCCAATCCAATT+TGG - chr3.3:66648753-66648772 None:intergenic 45.0%
TGCTCCCATATTTAGCTGCT+AGG - chr3.3:66647089-66647108 None:intergenic 45.0%
TGGCTCCACATGAAGAATCT+GGG - chr3.3:66647157-66647176 None:intergenic 45.0%
TGTGTGGAGCATGTTGTGAT+GGG + chr3.3:66644429-66644448 MS.gene022247:CDS 45.0%
TTAGTTACCCAGGAGAGAGA+GGG + chr3.3:66646305-66646324 MS.gene022247:intron 45.0%
TTGAGTCCCCGTTAAAGAAC+GGG - chr3.3:66646345-66646364 None:intergenic 45.0%
TTGCCAACCACACCTTACTT+AGG + chr3.3:66649473-66649492 MS.gene022247:CDS 45.0%
TTGGCTCCACATGAAGAATC+TGG - chr3.3:66647158-66647177 None:intergenic 45.0%
TTGGTATGCAAAGAGCAGCA+GGG + chr3.3:66645054-66645073 MS.gene022247:CDS 45.0%
TTGTGTGCCACAGATCACTA+AGG - chr3.3:66645157-66645176 None:intergenic 45.0%
TTGTGTGGAGCATGTTGTGA+TGG + chr3.3:66644428-66644447 MS.gene022247:CDS 45.0%
TTTGGTATGCAAAGAGCAGC+AGG + chr3.3:66645053-66645072 MS.gene022247:CDS 45.0%
! AGGTTTAAGGCAGATAACCC+TGG + chr3.3:66649845-66649864 MS.gene022247:CDS 45.0%
! CTTATTGTGGTGGAAGCAGA+TGG + chr3.3:66649068-66649087 MS.gene022247:CDS 45.0%
! GTTGGTGAGGTCAATGACAA+GGG - chr3.3:66644505-66644524 None:intergenic 45.0%
! GTTTGCAGTTTGGAACTCCT+TGG + chr3.3:66644672-66644691 MS.gene022247:intron 45.0%
! TCAGCTTTAATAGTTGGGCC+TGG - chr3.3:66644471-66644490 None:intergenic 45.0%
! TGTTGGTGAGGTCAATGACA+AGG - chr3.3:66644506-66644525 None:intergenic 45.0%
!!! GGGTTTTGGGATATGGTGAA+GGG + chr3.3:66649726-66649745 MS.gene022247:CDS 45.0%
!!! GGTCCTTCGTCTTTTTCAAG+TGG - chr3.3:66648364-66648383 None:intergenic 45.0%
!!! TGGGTTTTGGGATATGGTGA+AGG + chr3.3:66649725-66649744 MS.gene022247:CDS 45.0%
!! AAATTTCAAAAATAAAATAA+AGG + chr3.3:66646768-66646787 MS.gene022247:intron 5.0%
!! TTAAAAATCATTAATTAATA+TGG + chr3.3:66648129-66648148 MS.gene022247:intron 5.0%
!! TTAAAATTATAATTTAATCA+TGG + chr3.3:66646817-66646836 MS.gene022247:intron 5.0%
AAATGGGCCACCTAGTTGCA+AGG - chr3.3:66646459-66646478 None:intergenic 50.0%
ACAAGGACCACTCCCTGTTA+AGG - chr3.3:66646391-66646410 None:intergenic 50.0%
AGGCAGATAACCCTGGTGTT+TGG + chr3.3:66649852-66649871 MS.gene022247:CDS 50.0%
ATAAGGACCCTCTCTCTCCT+GGG - chr3.3:66646315-66646334 None:intergenic 50.0%
ATCGTGCGGTGTGAGGATTT+CGG - chr3.3:66649383-66649402 None:intergenic 50.0%
ATCTCATTGGGGCTGAAGAG+AGG - chr3.3:66645202-66645221 None:intergenic 50.0%
CAATGGAATGCCCAAACACC+AGG - chr3.3:66649866-66649885 None:intergenic 50.0%
CCAATGGAGGGTCCTTAACA+GGG + chr3.3:66646376-66646395 MS.gene022247:intron 50.0%
CTCTCTCCTGGGTAACTAAC+GGG - chr3.3:66646304-66646323 None:intergenic 50.0%
GGAATCAATGGCCAGTTTCC+AGG + chr3.3:66644450-66644469 MS.gene022247:CDS 50.0%
GGAGTTGGCATGTGAAACAC+TGG + chr3.3:66648453-66648472 MS.gene022247:intron 50.0%
GGCAGATAACCCTGGTGTTT+GGG + chr3.3:66649853-66649872 MS.gene022247:CDS 50.0%
GGCTCCACATGAAGAATCTG+GGG - chr3.3:66647156-66647175 None:intergenic 50.0%
GGTGAAGGGAGATTTAGACC+AGG + chr3.3:66649740-66649759 MS.gene022247:CDS 50.0%
GGTGTTAGAGGCAGAAAACC+AGG + chr3.3:66649203-66649222 MS.gene022247:CDS 50.0%
GTCCTTGGCTTCTCTCAACT+TGG + chr3.3:66647212-66647231 MS.gene022247:CDS 50.0%
GTTAGTTACCCAGGAGAGAG+AGG + chr3.3:66646304-66646323 MS.gene022247:intron 50.0%
TATAAGGACCCTCTCTCTCC+TGG - chr3.3:66646316-66646335 None:intergenic 50.0%
TCACTGGCATGGAATCAGAC+AGG + chr3.3:66644551-66644570 MS.gene022247:CDS 50.0%
TCAGCCCCAATGAGATGGAT+TGG + chr3.3:66645206-66645225 MS.gene022247:CDS 50.0%
TCCAATGGAGGGTCCTTAAC+AGG + chr3.3:66646375-66646394 MS.gene022247:intron 50.0%
TCTCTTCAGCCCCAATGAGA+TGG + chr3.3:66645201-66645220 MS.gene022247:CDS 50.0%
TGCACCCCAGATTCTTCATG+TGG + chr3.3:66647149-66647168 MS.gene022247:CDS 50.0%
TGTCACGTGGGGTCCATTTA+AGG - chr3.3:66646037-66646056 None:intergenic 50.0%
TGTTAAGGACCCTCCATTGG+AGG - chr3.3:66646376-66646395 None:intergenic 50.0%
! AGCTTGCTCATCAATGGACG+AGG + chr3.3:66647048-66647067 MS.gene022247:CDS 50.0%
! GCATAGTGATTGGTCGGAGT+TGG + chr3.3:66648438-66648457 MS.gene022247:intron 50.0%
! TCGTTCCATAAGGGTGTGAC+TGG - chr3.3:66649299-66649318 None:intergenic 50.0%
! TGGCTGTGGAGTTCCCATTT+TGG - chr3.3:66649360-66649379 None:intergenic 50.0%
! TTCCATAAGGGTGTGACTGG+TGG - chr3.3:66649296-66649315 None:intergenic 50.0%
! TTTGGAACTCCTTGGGCTGA+TGG + chr3.3:66644680-66644699 MS.gene022247:CDS 50.0%
!! CTGTATGGAGCTTGTTGGTG+AGG - chr3.3:66644518-66644537 None:intergenic 50.0%
!! GAGATGGATTGGTGAACCAC+AGG + chr3.3:66645217-66645236 MS.gene022247:CDS 50.0%
!! GTGACTGGTGGTGGTAATGT+TGG - chr3.3:66649284-66649303 None:intergenic 50.0%
CAAAGAGCAGCAGGGCTGTA+TGG + chr3.3:66645062-66645081 MS.gene022247:CDS 55.0%
CACCACCAGTCACACCCTTA+TGG + chr3.3:66649291-66649310 MS.gene022247:CDS 55.0%
CCCTGTTAAGGACCCTCCAT+TGG - chr3.3:66646379-66646398 None:intergenic 55.0%
TGTGAGGATTTCGGTGGCTG+TGG - chr3.3:66649374-66649393 None:intergenic 55.0%
! CATAAGGGTGTGACTGGTGG+TGG - chr3.3:66649293-66649312 None:intergenic 55.0%
! GGCCAAGTTGAGAGAAGCCA+AGG - chr3.3:66647217-66647236 None:intergenic 55.0%
! TGGGTGTGCTCAAAGCACCA+TGG + chr3.3:66648761-66648780 MS.gene022247:intron 55.0%
GAGGAGAATCGTGCGGTGTG+AGG - chr3.3:66649390-66649409 None:intergenic 60.0%
GCAGCAGTTCCATCAGCCCA+AGG - chr3.3:66644692-66644711 None:intergenic 60.0%
GGAGGGTCCTTAACAGGGAG+TGG + chr3.3:66646381-66646400 MS.gene022247:intron 60.0%
GTGCGGTGTGAGGATTTCGG+TGG - chr3.3:66649380-66649399 None:intergenic 60.0%
GTGGGACCCGTTAGTTACCC+AGG + chr3.3:66646295-66646314 MS.gene022247:intron 60.0%
GTTAGGGCTTGTGGTGTGCC+TGG - chr3.3:66649224-66649243 None:intergenic 60.0%
! CAAGGTTCGGGTTCGAACCC+TGG - chr3.3:66647890-66647909 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 66644312 66649994 66644312 ID=MS.gene022247
chr3.3 mRNA 66644312 66649994 66644312 ID=MS.gene022247.t1;Parent=MS.gene022247
chr3.3 exon 66644312 66644572 66644312 ID=MS.gene022247.t1.exon1;Parent=MS.gene022247.t1
chr3.3 CDS 66644312 66644572 66644312 ID=cds.MS.gene022247.t1;Parent=MS.gene022247.t1
chr3.3 exon 66644680 66644772 66644680 ID=MS.gene022247.t1.exon2;Parent=MS.gene022247.t1
chr3.3 CDS 66644680 66644772 66644680 ID=cds.MS.gene022247.t1;Parent=MS.gene022247.t1
chr3.3 exon 66645026 66645238 66645026 ID=MS.gene022247.t1.exon3;Parent=MS.gene022247.t1
chr3.3 CDS 66645026 66645238 66645026 ID=cds.MS.gene022247.t1;Parent=MS.gene022247.t1
chr3.3 exon 66647048 66647242 66647048 ID=MS.gene022247.t1.exon4;Parent=MS.gene022247.t1
chr3.3 CDS 66647048 66647242 66647048 ID=cds.MS.gene022247.t1;Parent=MS.gene022247.t1
chr3.3 exon 66649059 66649994 66649059 ID=MS.gene022247.t1.exon5;Parent=MS.gene022247.t1
chr3.3 CDS 66649059 66649994 66649059 ID=cds.MS.gene022247.t1;Parent=MS.gene022247.t1
Gene Sequence

>MS.gene022247

ATGAGTTTGCTGAAAGCAGTTTTTGTTTGGTGCATATGGTTAGGGTTATTTGAGTTATCATTAGCAAAAGTGAGACACTACAAGTTTGATGTTGAATACATATACAAAAAGCCAGATTGTGTGGAGCATGTTGTGATGGGAATCAATGGCCAGTTTCCAGGCCCAACTATTAAAGCTGAAGTTAATGACACCCTTGTCATTGACCTCACCAACAAGCTCCATACAGAAGGAACTGTTATTCACTGGCATGGAATCAGACAGGTAAATTCTTAGTTCTAGTGGTTTGATCATGAACCAAAGTACCAGTCTAGTTATAATTAAATATTACATTAATTCTTTGTTGTTAATTACTGTAAAAATGTTTGCAGTTTGGAACTCCTTGGGCTGATGGAACTGCTGCAATCTCTCAGTGTGCTATAAATCCAGGAGAAACTTTTCAATACAGATTCAAAGTTGACAGGGTAATTAATTATTAATTAATTAAAATTTTAGTTCTCTGTTCTATGACCTCTTTTTCTGTTTCCACTGCTACATGTTGATTAATTTGATCACATTTTTGACCCCAAGTGGCATATATGTCCATGCCAGCAATGGTTTTTCTTTTGTTTTTTTGATTACATATTTTATTTTATTTTATTTTATAATACTATATAATATAATTAGAGCTAGGTACATATATATAATATTAACTGGTTGGTGTTAAATATGGTGCAGCCTGGTACATATTTCTATCATGGACATTTTGGTATGCAAAGAGCAGCAGGGCTGTATGGTTCTCTAATAGTGGATTTACCAAAGGAACAAAGAGAGCCATTTCATTATGATGGTGAGTTTAATCTGCTCCTTAGTGATCTGTGGCACACAAGCTCACATGAACAAGAGGTTGGCCTCTCTTCAGCCCCAATGAGATGGATTGGTGAACCACAGGTATACTTTCAACTTTTCATATATACAAAAATATCATGATCATTCAATTTTTATTTATTTTATTTTATCAAATATTAAAAACAGCTATGTGTACAATAAACGTTTTTACGTAAAAAAATAATAAAAATTTAAAATAATAATAAAAATATAATATAATTTAACTCGTATACATTGTCCTTGTAAAGAAACTTTTACACTTTCAATCAATAACAATCGTTAGATCTTTAAAAATGTTTGACATTTCTCATTCTTGCATAAGTTATGCTTGAATGTGTTTTTTCTTGTACTCTTAACTAGTTTTAAAGTTGTCATGATCGGTTGAATGTGTAAAACTTCTTAAACTAACATTGAACAAAAATTGAACTCTTAAAATAACTTACTCGTTATACATCTTTAATTTCTTCATTGTAAAATGTTACTTATAAAAAATAAAATTATTTGATATCTAGAACATTTTAAAGCATAATAACTTTTGGCTTATGAATATGATTACGCTAAAGAATTTCATAACTAATTAACATAAGACTTCTTCTCACTATACTTTTCATCATCACCAATGATACTCTTTATTTGTGACATCCACCATATGAGCATTAGTGCTTTCCTTTTTCATATGAATATGATGTCTTTGATCTGTAAACCAGACAATAAAATTCTTGAAAGAAAACAACTCACACTCATGTGGCATAGAAATAAAAATTGAAAATTGGGAAAGAATAAAGAGTCATATTCCCATTCACCTAATACCTAATAATTCCTAAGAGCATCCACAATGGTAGTTTCCTAACAAGGACTCCTTAAATGGACCCCACGTGACACATCACTTATTTATGATTTTTTAATAAAAGTACCTATTAAGGACTCAATGACTCCAATGACAATACACTAACAAAGACTCCAATGAAAAGTACTTAAATATGTCCCACTATCTTTATATATTAAACAAAAATAATTTATCTATTACTCATTTTTACAAGTGGGACCAAGTAGTACACATTTTATTACTTCTTTATGCAAGTGGGACCAAGTAGTACACATTTTATTACTTTTTTAAACGTGGGACCCGTTAGTTACCCAGGAGAGAGAGGGTCCTTATATAGTTGCCCGTTCTTTAACGGGGACTCAATTTTTCTTCCTCCAATGGAGGGTCCTTAACAGGGAGTGGTCCTTGTTAAGTAAAGACCCCATTGGAGATGCTCTAATAGTGGCATAGAAAACCTTGCAACTAGGTGGCCCATTTCATCAAATCATCGTTGGAATTTTTCTATAATGGTGAATTCTCGCAGTTGCCACCCCCACTTGTCAATTTTTTTTTTCAACAACACATCTTTCAAGACAATAGAAATATGAACTGGTATTCTTAAAAAAAAAATATGAACTGGTACAAATTTTTCTACTTTTTTTTTGGACAAATTTTTCTACTTGTATTATATTATTTTATCTTTTTTTTATAAAAAAATTGTAAGTTAATATGAACTGGTACAAATTTTTTCTTCTTATTTTATCCTTTAAATTTTAATCAAGACAAAAAATTTCAAAAATAAAATAAAGGAAAGCATCGTATTACAGTATAAATATTTAAAATTATAATTTAATCATGGACAGTACCAAGAAAGATAATGGAATAGTATTATTTTTCATTCTTTTGGTAAATGTACAATTGGCCACGCGGTGTTAGCTTTATTTTGACGCAAAAAGGGAAAGACAATCAGAAGAAACGAACAAAAGAAACAGTGTATTTTTCTTAAAATAATTGCATGCGTAACCTTTTATGAATGATAATATAGTATTTGTTTATTTGTTTTTTAGAGCTTGCTCATCAATGGACGAGGACAGTTCAATTGTTCCCTAGCAGCTAAATATGGGAGCACCAACCTACAACAATGCAATTTGAAAGGTGGTGAAGAATGTGCACCCCAGATTCTTCATGTGGAGCCAAAAAAGACCTACAGAATAAGGATTGCTAGTACTACGTCCTTGGCTTCTCTCAACTTGGCCATTTCAGTGAGTTTTCTCCTAGCTATGACCCACTACATATATGATATATGTTTGCATTATTTCAATATATATATCGTTGTATTTCTTTCTTATTAATTTATATTATTCTGTCATATTCCAATTAGTTTGTGTGTGTCTATTTTGCATATCATTATTAGGGTTATATCATTATTGCTTCCACATCCAAATATATGCTCATCTCAATTATCACCATTTAGGTAGCTGTCTCATAATTAAGATAGTAGTACTTCATTTCCTTGTTCCCACCAAATAAAAAAGGAATCAATTGTCGACATAATAAGGAAGGTTTACTTTTAAGAGGAAATTCCGGAGATTAATAGTCTAATTCATGGAAAACGAATGAAATAATTTAGGAACAGTAGGTGTGTGTTTAAAGCAGCGTAAGAAAAACTTCACTAATAGGTCAAAGAAGTTGGAAAAAATATCTTTGAAAAAATGTTTTAGATATGGAAATCTACGACTTCGTGTGTCCAGCTCAAGTAGCCGTTTAATGTGCAGAATCGTAGGAATTAAAAATTAAGGTTTTGCGTGTCTTAAAACACATGTTAAATACTTTGTAAGAAAAAAACTTTAACTTCAATAGGAACTCCATTTATTCTTTTTTAAATATCATAGTTTTTTTTTGGTGGCCAGGGTTCGAACCCGAACCTTGTATATATTATGCATTGTCATTACCAACTGAGCTTAACTCACAAGGACTAAATATTGTAGTTTGACTATTTTACATTATTCATATCTTATTTTAATGATATTATTTTATAAAGCCAAATGTTAGTATAGGAGATGTTCAATTAGTTGTTATATTGGAGGGGGATTCTGATTGATGTACAAATGTTATAAACACTCAGAATTGTCGCATCAATTGTTTTGGTTAAAAATCATTAATTAATATGGCAATTCTGATTGTTTTGATTGGTTGTATTTAAAAAAACAAACATATACATTCAAATAAATGAAGCGGTACCAACAAAAAATAATTCTATAAAGCTGAAAAAACACTAGTCAATTAACCTTTAAATGTGATAATGATGAACGGAGATTTGAATCACATGAGTGGGGATTAGTGAGTTGTCAAACGTGCGACAAAAAATAGTAGATCCAAACCACTTGAAAAAGACGAAGGACCACGTTATGGAGTCCTCGTATAAAATAAGGAAAAGAAAACAACGTTAACTGAGATGCATAGTGATTGGTCGGAGTTGGCATGTGAAACACTGGTTTCTTGATAACTAGTGCCAAATTTATGTCTATAGAGGGAATCACATCTTGCAGGAATGAAATCTCCCCATTTTATCATACATGCATGCACTTTCATTCAAATCAACAACTGTATTACATAAGTGTACAAAATTCAAATTCGAATTAAATATTGTTTCATTGGTTGGACTCAATTGATTCATGAACTTCACGTTAAATTATTTAGGAAAAGTTGAATTTAAATCTTGGTTGGTTGTTAGATTTTACTTACAATCTGACTATCCAATTATGGGGACCAAATTGGATTGGGTGTGCTCAAAGCACCATGGTTTGTTAGATCAACATGAGACAATATGTTTTTCAACTTTACCAAATAACATTTTTAATAAAACTTAAAATAGTGATTGTTTGATCTTGATCTAACGACCAAGATATTCTAAATCTAAATGCATGATGCTTTGGGAGTAGTCACTGATTTTGATAAATTTTCACATAAAACCTACTGCTGATTATTGCATTTCCCCATATCATTCCTTGAATTGCACCATAGATTGATTCATTATTTCATGAAATAACATTGCCCCATAATTTCTGTTTGTTTCAGAATCACAAACTTATTGTGGTGGAAGCAGATGGAAACTACGTGCACCCATTCGCAGTTGATGACATCGACATCTACTCAGGTGAAACCTACTCAGTACTCCTTACAACAGACCAAGACCCTAAAAAAAACTACTGGCTTTCAATTGGTGTTAGAGGCAGAAAACCAGGCACACCACAAGCCCTAACAATCCTTAACTACAAAACAATCTCTGCCTCAGTTTTTCCAACATTACCACCACCAGTCACACCCTTATGGAACGATACCGAACACAGCAAAGCATTCACAAAACAAATCATTTCCAAAATGGGAACTCCACAGCCACCGAAATCCTCACACCGCACGATTCTCCTCCTCAATACACAAAACAAAATCGGTAGTTTCACTAAATGGGCTATTAACAATGTTTCATTAACATTGCCAACCACACCTTACTTAGGATCAATCAAATTTAAGCTAAACAATACATTTGATAGAAATCCACCACCAGAGAGATTTCCAATGGATTATGACATATTTAAAAATCCAGTTAATCCAAATACAACTACCGGTAACGGTGTTTACACGTTTCAGTTGAATGAGGTTGTTGATGTGATACTACAAAATGCAAACCAGTTAAATGGGAATGGTAGTGAAATTCATCCATGGCATTTGCATGGACATGATTTTTGGGTTTTGGGATATGGTGAAGGGAGATTTAGACCAGGTGTTGATGAGAAAAGTTTCAATTTGACACGTGCACCTTTGAGGAACACTGCAGTTATATTTCCATATGGTTGGACTGCATTAAGGTTTAAGGCAGATAACCCTGGTGTTTGGGCATTCCATTGTCACATTGAACCACATTTGCATATGGGAATGGGTGTTATTTTTGCTGAGGCTGTTCATAAAGTTAGGAACATACCTAAAGAAGCTCTTAAGTGTGGTGCTACAGCCTAG
Protein sequence

>MS.gene022247.t1

MSLLKAVFVWCIWLGLFELSLAKVRHYKFDVEYIYKKPDCVEHVVMGINGQFPGPTIKAEVNDTLVIDLTNKLHTEGTVIHWHGIRQFGTPWADGTAAISQCAINPGETFQYRFKVDRPGTYFYHGHFGMQRAAGLYGSLIVDLPKEQREPFHYDGEFNLLLSDLWHTSSHEQEVGLSSAPMRWIGEPQSLLINGRGQFNCSLAAKYGSTNLQQCNLKGGEECAPQILHVEPKKTYRIRIASTTSLASLNLAISNHKLIVVEADGNYVHPFAVDDIDIYSGETYSVLLTTDQDPKKNYWLSIGVRGRKPGTPQALTILNYKTISASVFPTLPPPVTPLWNDTEHSKAFTKQIISKMGTPQPPKSSHRTILLLNTQNKIGSFTKWAINNVSLTLPTTPYLGSIKFKLNNTFDRNPPPERFPMDYDIFKNPVNPNTTTGNGVYTFQLNEVVDVILQNANQLNGNGSEIHPWHLHGHDFWVLGYGEGRFRPGVDEKSFNLTRAPLRNTAVIFPYGWTALRFKADNPGVWAFHCHIEPHLHMGMGVIFAEAVHKVRNIPKEALKCGATA