Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023130.t1 | NP_001275136.1 | 100 | 130 | 0 | 0 | 1 | 130 | 1 | 130 | 8.20E-68 | 266.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023130.t1 | P42798 | 99.2 | 130 | 1 | 0 | 1 | 130 | 1 | 130 | 2.6e-70 | 265.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023130.t1 | A0A1U7YEG5 | 100.0 | 130 | 0 | 0 | 1 | 130 | 1 | 130 | 5.9e-68 | 266.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene041458 | MS.gene023130 | PPI |
| MS.gene36468 | MS.gene023130 | PPI |
| MS.gene036595 | MS.gene023130 | PPI |
| MS.gene028323 | MS.gene023130 | PPI |
| MS.gene35135 | MS.gene023130 | PPI |
| MS.gene58719 | MS.gene023130 | PPI |
| MS.gene023130 | MS.gene049026 | PPI |
| MS.gene55887 | MS.gene023130 | PPI |
| MS.gene20156 | MS.gene023130 | PPI |
| MS.gene58227 | MS.gene023130 | PPI |
| MS.gene06172 | MS.gene023130 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023130.t1 | MTR_4g117470 | 100.000 | 130 | 0 | 0 | 1 | 130 | 1 | 130 | 1.05e-93 | 266 |
| MS.gene023130.t1 | MTR_4g094598 | 99.231 | 130 | 1 | 0 | 1 | 130 | 1 | 130 | 2.82e-93 | 265 |
| MS.gene023130.t1 | MTR_1g105415 | 99.231 | 130 | 1 | 0 | 1 | 130 | 1 | 130 | 2.82e-93 | 265 |
| MS.gene023130.t1 | MTR_8g101910 | 52.000 | 125 | 60 | 0 | 6 | 130 | 5 | 129 | 1.82e-45 | 144 |
| MS.gene023130.t1 | MTR_8g101910 | 49.474 | 95 | 48 | 0 | 6 | 100 | 5 | 99 | 1.72e-28 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023130.t1 | AT5G59850 | 99.231 | 130 | 1 | 0 | 1 | 130 | 1 | 130 | 1.76e-93 | 265 |
| MS.gene023130.t1 | AT1G07770 | 99.231 | 130 | 1 | 0 | 1 | 130 | 1 | 130 | 1.76e-93 | 265 |
| MS.gene023130.t1 | AT1G07770 | 99.231 | 130 | 1 | 0 | 1 | 130 | 1 | 130 | 1.76e-93 | 265 |
| MS.gene023130.t1 | AT1G07770 | 99.231 | 130 | 1 | 0 | 1 | 130 | 1 | 130 | 1.76e-93 | 265 |
| MS.gene023130.t1 | AT3G46040 | 97.692 | 130 | 3 | 0 | 1 | 130 | 1 | 130 | 4.03e-92 | 262 |
| MS.gene023130.t1 | AT2G39590 | 91.538 | 130 | 11 | 0 | 1 | 130 | 1 | 130 | 4.30e-87 | 249 |
| MS.gene023130.t1 | AT4G29430 | 54.400 | 125 | 57 | 0 | 6 | 130 | 5 | 129 | 2.98e-47 | 149 |
| MS.gene023130.t1 | AT2G19720 | 53.600 | 125 | 58 | 0 | 6 | 130 | 5 | 129 | 3.11e-45 | 144 |
Find 28 sgRNAs with CRISPR-Local
Find 119 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGTGGTTATAGGATATAT+TGG | 0.379495 | 4.3:-19127994 | MS.gene023130:intron |
| GACTACCTCTGCTGGTATCA+TGG | 0.414748 | 4.3:-19126504 | MS.gene023130:CDS |
| ATTAGTCCTCGTTTCGATGT+TGG | 0.460967 | 4.3:-19127892 | MS.gene023130:CDS |
| AAAATTGTTGTGGAATTGAA+TGG | 0.479932 | 4.3:-19127937 | MS.gene023130:CDS |
| TACGTTGATGATCACAGGTC+TGG | 0.486815 | 4.3:-19127961 | MS.gene023130:CDS |
| AATGTTGGTGGTAAAGTGTT+GGG | 0.506719 | 4.3:-19126458 | MS.gene023130:CDS |
| AGATTGAAGGATGGACTGCT+AGG | 0.524175 | 4.3:-19127861 | MS.gene023130:CDS |
| AGGATGGCCTAATCATAACT+TGG | 0.529437 | 4.3:+19128140 | None:intergenic |
| GGAAGCGCCAAGTTATGATT+AGG | 0.530843 | 4.3:-19128147 | MS.gene023130:CDS |
| ATTGTCTTGACTACCTCTGC+TGG | 0.534592 | 4.3:-19126512 | MS.gene023130:CDS |
| GAATGTTGGTGGTAAAGTGT+TGG | 0.537027 | 4.3:-19126459 | MS.gene023130:CDS |
| TCGAATACGTTGATGATCAC+AGG | 0.543527 | 4.3:-19127966 | MS.gene023130:CDS |
| GCTAGGAGAAAGAATGTTGG+TGG | 0.567141 | 4.3:-19126470 | MS.gene023130:CDS |
| TTGTAACAGCAAATATGGTG+AGG | 0.575157 | 4.3:-19128222 | None:intergenic |
| TAGGCTTCTTCCCTCAAGAC+AGG | 0.576488 | 4.3:-19127842 | MS.gene023130:intron |
| TGTAACAGCAAATATGGTGA+GGG | 0.583163 | 4.3:-19128221 | None:intergenic |
| GAGGCTAGGAGAAAGAATGT+TGG | 0.584494 | 4.3:-19126473 | MS.gene023130:CDS |
| TCATGGATCATGAAGAGGCT+AGG | 0.585008 | 4.3:-19126487 | MS.gene023130:CDS |
| ATGTACAATGCTGAGAAACG+TGG | 0.619087 | 4.3:-19128169 | MS.gene023130:CDS |
| GTTGGTGTCAAAGAGATTGA+AGG | 0.620427 | 4.3:-19127874 | MS.gene023130:CDS |
| CTTATCGTCATGCAAAAGCA+TGG | 0.625917 | 4.3:-19128097 | MS.gene023130:intron |
| CAGGTCTGGCAAAATTGTTG+TGG | 0.629911 | 4.3:-19127947 | MS.gene023130:CDS |
| AATGGAAGATTGAATAAGTG+TGG | 0.630140 | 4.3:-19127919 | MS.gene023130:CDS |
| TGGTATCATGGATCATGAAG+AGG | 0.639197 | 4.3:-19126492 | MS.gene023130:CDS |
| ATGATCCATGATACCAGCAG+AGG | 0.644078 | 4.3:+19126499 | None:intergenic |
| GTGTCAAAGAGATTGAAGGA+TGG | 0.661917 | 4.3:-19127870 | MS.gene023130:CDS |
| TGTACAATGCTGAGAAACGT+GGG | 0.665211 | 4.3:-19128168 | MS.gene023130:CDS |
| TTGACACCAACATCGAAACG+AGG | 0.688564 | 4.3:+19127886 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTAATTATTCTTTTATTTAT+TGG | - | chr4.3:19127704-19127723 | MS.gene023130:intron | 10.0% |
| !! | AAAGAAAAACTAATAGTTAA+AGG | - | chr4.3:19127925-19127944 | MS.gene023130:CDS | 15.0% |
| !! | AAATTATAAAAACAGCTTAT+AGG | - | chr4.3:19127046-19127065 | MS.gene023130:intron | 15.0% |
| !! | AAGAAAAACTAATAGTTAAA+GGG | - | chr4.3:19127926-19127945 | MS.gene023130:CDS | 15.0% |
| !! | ATAAAACACAAACTTAATTA+GGG | + | chr4.3:19127199-19127218 | None:intergenic | 15.0% |
| !! | TATAAAACACAAACTTAATT+AGG | + | chr4.3:19127200-19127219 | None:intergenic | 15.0% |
| !!! | ATTTTCTTATTATGCTTTTA+TGG | - | chr4.3:19127628-19127647 | MS.gene023130:intron | 15.0% |
| !!! | TTTTCTTATTATGCTTTTAT+GGG | - | chr4.3:19127629-19127648 | MS.gene023130:intron | 15.0% |
| !! | AAAATATTAAAAGATGGGAT+GGG | + | chr4.3:19127790-19127809 | None:intergenic | 20.0% |
| !! | AAATAAAAGAATAATTAGCG+AGG | + | chr4.3:19127702-19127721 | None:intergenic | 20.0% |
| !! | AATTGAATAATTGTTGCAAA+AGG | + | chr4.3:19127838-19127857 | None:intergenic | 20.0% |
| !! | ACAAAGTATATAAAGATTGT+CGG | + | chr4.3:19127963-19127982 | None:intergenic | 20.0% |
| !! | AGAAAAACTAATAGTTAAAG+GGG | - | chr4.3:19127927-19127946 | MS.gene023130:CDS | 20.0% |
| !! | CAAAAGCAAATAAATTAGAA+AGG | + | chr4.3:19127353-19127372 | None:intergenic | 20.0% |
| !! | TAAAATATTAAAAGATGGGA+TGG | + | chr4.3:19127791-19127810 | None:intergenic | 20.0% |
| !! | TAAATTCAAACCGTTATTAA+TGG | - | chr4.3:19127595-19127614 | MS.gene023130:intron | 20.0% |
| !!! | ATGAATCATTTTTAATGATG+GGG | - | chr4.3:19127568-19127587 | MS.gene023130:intron | 20.0% |
| !!! | CATGAATCATTTTTAATGAT+GGG | - | chr4.3:19127567-19127586 | MS.gene023130:intron | 20.0% |
| !!! | CTTTCTAATTTATTTGCTTT+TGG | - | chr4.3:19127351-19127370 | MS.gene023130:intron | 20.0% |
| !!! | TCATGAATCATTTTTAATGA+TGG | - | chr4.3:19127566-19127585 | MS.gene023130:intron | 20.0% |
| !!! | TTTCTTATTATGCTTTTATG+GGG | - | chr4.3:19127630-19127649 | MS.gene023130:intron | 20.0% |
| ! | AAAATTGTTGTGGAATTGAA+TGG | - | chr4.3:19126716-19126735 | MS.gene023130:intron | 25.0% |
| ! | AGAAAACTAACTTATGTCAA+TGG | + | chr4.3:19126942-19126961 | None:intergenic | 25.0% |
| ! | GTATAGTAAATAGATAGAGT+GGG | + | chr4.3:19127680-19127699 | None:intergenic | 25.0% |
| ! | TATACTTTGTAGTAAATCGA+TGG | - | chr4.3:19127973-19127992 | MS.gene023130:CDS | 25.0% |
| ! | TCAAACTAGTATCATGTTTA+TGG | + | chr4.3:19126850-19126869 | None:intergenic | 25.0% |
| ! | TGATATATTGTATACTCTTG+TGG | - | chr4.3:19126643-19126662 | MS.gene023130:intron | 25.0% |
| ! | TTGACTTATGCTTCATATAT+TGG | - | chr4.3:19127470-19127489 | MS.gene023130:intron | 25.0% |
| !! | GAACTTATGAAATTAGCTTA+TGG | - | chr4.3:19126975-19126994 | MS.gene023130:intron | 25.0% |
| !! | GTATCATATGATTTTTCTTG+TGG | - | chr4.3:19128078-19128097 | MS.gene023130:intron | 25.0% |
| !!! | ATTGACATAAGTTAGTTTTC+TGG | - | chr4.3:19126941-19126960 | MS.gene023130:intron | 25.0% |
| !!! | GAATTTGATAATCACTTTTG+AGG | + | chr4.3:19126536-19126555 | None:intergenic | 25.0% |
| !!! | TTGACATAAGTTAGTTTTCT+GGG | - | chr4.3:19126942-19126961 | MS.gene023130:intron | 25.0% |
| AAAATAAGCCGATAAAAGCT+TGG | + | chr4.3:19127009-19127028 | None:intergenic | 30.0% | |
| AAACTTAATTAGGGTCTGTT+TGG | + | chr4.3:19127190-19127209 | None:intergenic | 30.0% | |
| AAATAAGCCGATAAAAGCTT+GGG | + | chr4.3:19127008-19127027 | None:intergenic | 30.0% | |
| AATGGAAGATTGAATAAGTG+TGG | - | chr4.3:19126734-19126753 | MS.gene023130:intron | 30.0% | |
| ACAAGCAACATAACATTCAA+CGG | + | chr4.3:19128056-19128075 | None:intergenic | 30.0% | |
| ATACGCTCAACCATTAATAA+CGG | + | chr4.3:19127608-19127627 | None:intergenic | 30.0% | |
| ATTTGAGCAACCAATAGTTA+GGG | + | chr4.3:19128105-19128124 | None:intergenic | 30.0% | |
| CTTGTGGTTATAGGATATAT+TGG | - | chr4.3:19126659-19126678 | MS.gene023130:intron | 30.0% | |
| GGTATAGTAAATAGATAGAG+TGG | + | chr4.3:19127681-19127700 | None:intergenic | 30.0% | |
| TATAGTTCCTAACTTTCTTG+TGG | - | chr4.3:19127216-19127235 | MS.gene023130:intron | 30.0% | |
| TCATATATTGGAAATCACTG+TGG | - | chr4.3:19127482-19127501 | MS.gene023130:intron | 30.0% | |
| TTGTATACTCTTGTGGTTAT+AGG | - | chr4.3:19126650-19126669 | MS.gene023130:intron | 30.0% | |
| ! | CAATATTCCCAAGCTTTTAT+CGG | - | chr4.3:19126998-19127017 | MS.gene023130:intron | 30.0% |
| ! | TTATTATGCTTTTATGGGGT+GGG | - | chr4.3:19127634-19127653 | MS.gene023130:intron | 30.0% |
| !! | ATGTAGTTGACTCTATTTTG+TGG | - | chr4.3:19126597-19126616 | MS.gene023130:intron | 30.0% |
| !! | TGTAGTTGACTCTATTTTGT+GGG | - | chr4.3:19126598-19126617 | MS.gene023130:intron | 30.0% |
| !! | TTGATAATCACTTTTGAGGA+TGG | + | chr4.3:19126532-19126551 | None:intergenic | 30.0% |
| !!! | ATTTATTTGCTTTTGGTTCC+TGG | - | chr4.3:19127358-19127377 | MS.gene023130:intron | 30.0% |
| !!! | CTAGTAGGCTTTTAAAACTT+GGG | - | chr4.3:19127401-19127420 | MS.gene023130:intron | 30.0% |
| !!! | TCTAGTAGGCTTTTAAAACT+TGG | - | chr4.3:19127400-19127419 | MS.gene023130:intron | 30.0% |
| ACAGAAACCTGTTCTATATG+GGG | - | chr4.3:19127884-19127903 | MS.gene023130:CDS | 35.0% | |
| AGAATGACCACAAGAAAGTT+AGG | + | chr4.3:19127226-19127245 | None:intergenic | 35.0% | |
| AGACAGAAACCTGTTCTATA+TGG | - | chr4.3:19127882-19127901 | MS.gene023130:CDS | 35.0% | |
| ATATTGGAAATCACTGTGGT+AGG | - | chr4.3:19127486-19127505 | MS.gene023130:intron | 35.0% | |
| CCTACTAGACCTAACATAAA+GGG | + | chr4.3:19127389-19127408 | None:intergenic | 35.0% | |
| CTACTAGACCTAACATAAAG+GGG | + | chr4.3:19127388-19127407 | None:intergenic | 35.0% | |
| CTGAAGTTGCTATCATCATA+TGG | - | chr4.3:19128026-19128045 | MS.gene023130:intron | 35.0% | |
| GACAGAAACCTGTTCTATAT+GGG | - | chr4.3:19127883-19127902 | MS.gene023130:CDS | 35.0% | |
| GATTTGAGCAACCAATAGTT+AGG | + | chr4.3:19128106-19128125 | None:intergenic | 35.0% | |
| TAGTAAATAGATAGAGTGGG+AGG | + | chr4.3:19127677-19127696 | None:intergenic | 35.0% | |
| TGTTTGATCTCGACATAACA+AGG | + | chr4.3:19127320-19127339 | None:intergenic | 35.0% | |
| TTAATTAGGGTCTGTTTGGA+TGG | + | chr4.3:19127186-19127205 | None:intergenic | 35.0% | |
| TTGCTCAAATCATGCAGTTT+GGG | - | chr4.3:19128115-19128134 | MS.gene023130:CDS | 35.0% | |
| ! | CTTATTATGCTTTTATGGGG+TGG | - | chr4.3:19127633-19127652 | MS.gene023130:intron | 35.0% |
| !! | AATGTTGGTGGTAAAGTGTT+GGG | - | chr4.3:19128195-19128214 | MS.gene023130:CDS | 35.0% |
| !!! | TAGGCTTTTAAAACTTGGGT+TGG | - | chr4.3:19127405-19127424 | MS.gene023130:intron | 35.0% |
| AGGATGGCCTAATCATAACT+TGG | + | chr4.3:19126516-19126535 | None:intergenic | 40.0% | |
| ATGTACAATGCTGAGAAACG+TGG | - | chr4.3:19126484-19126503 | MS.gene023130:CDS | 40.0% | |
| ATTAGTCCTCGTTTCGATGT+TGG | - | chr4.3:19126761-19126780 | MS.gene023130:intron | 40.0% | |
| CAAATGTCTCACTCACTTAC+GGG | - | chr4.3:19127517-19127536 | MS.gene023130:intron | 40.0% | |
| CCAAATGTCTCACTCACTTA+CGG | - | chr4.3:19127516-19127535 | MS.gene023130:intron | 40.0% | |
| CCCTTTATGTTAGGTCTAGT+AGG | - | chr4.3:19127386-19127405 | MS.gene023130:intron | 40.0% | |
| CGTAAGTGAGTGAGACATTT+GGG | + | chr4.3:19127518-19127537 | None:intergenic | 40.0% | |
| CTAACATAAAGGGGAATTCC+AGG | + | chr4.3:19127379-19127398 | None:intergenic | 40.0% | |
| CTGGAATTCCCCTTTATGTT+AGG | - | chr4.3:19127377-19127396 | MS.gene023130:intron | 40.0% | |
| CTGTATTCCCCATATAGAAC+AGG | + | chr4.3:19127894-19127913 | None:intergenic | 40.0% | |
| CTTATCGTCATGCAAAAGCA+TGG | - | chr4.3:19126556-19126575 | MS.gene023130:intron | 40.0% | |
| GCCTACTAGACCTAACATAA+AGG | + | chr4.3:19127390-19127409 | None:intergenic | 40.0% | |
| GGTGGGAGTAGAATATTCAT+TGG | - | chr4.3:19127651-19127670 | MS.gene023130:intron | 40.0% | |
| GTGTCAAAGAGATTGAAGGA+TGG | - | chr4.3:19126783-19126802 | MS.gene023130:intron | 40.0% | |
| GTTGCTCAAATCATGCAGTT+TGG | - | chr4.3:19128114-19128133 | MS.gene023130:CDS | 40.0% | |
| TAAGTCAAGACAAACACTGC+CGG | + | chr4.3:19127458-19127477 | None:intergenic | 40.0% | |
| TGGTATCATGGATCATGAAG+AGG | - | chr4.3:19128161-19128180 | MS.gene023130:CDS | 40.0% | |
| TGTACAATGCTGAGAAACGT+GGG | - | chr4.3:19126485-19126504 | MS.gene023130:CDS | 40.0% | |
| TTCTTGTGGTCCCTAACTAT+TGG | - | chr4.3:19128092-19128111 | MS.gene023130:intron | 40.0% | |
| TTTGTGTACCACATTGACGT+TGG | - | chr4.3:19127246-19127265 | MS.gene023130:intron | 40.0% | |
| ! | CATGCTTTTGCATGACGATA+AGG | + | chr4.3:19126558-19126577 | None:intergenic | 40.0% |
| ! | TCATGCAAAAGCATGGTATG+TGG | - | chr4.3:19126563-19126582 | MS.gene023130:intron | 40.0% |
| !! | AACTTGGGTTGGAATTGTAG+AGG | - | chr4.3:19127416-19127435 | MS.gene023130:intron | 40.0% |
| !! | ACTTGGGTTGGAATTGTAGA+GGG | - | chr4.3:19127417-19127436 | MS.gene023130:intron | 40.0% |
| !! | GAATGTTGGTGGTAAAGTGT+TGG | - | chr4.3:19128194-19128213 | MS.gene023130:CDS | 40.0% |
| !! | GTTGGTGTCAAAGAGATTGA+AGG | - | chr4.3:19126779-19126798 | MS.gene023130:intron | 40.0% |
| !! | TCGAATACGTTGATGATCAC+AGG | - | chr4.3:19126687-19126706 | MS.gene023130:intron | 40.0% |
| !! | TTTTAGCTGACCTGTCTTGA+GGG | + | chr4.3:19126824-19126843 | None:intergenic | 40.0% |
| !!! | TTTTTAGCTGACCTGTCTTG+AGG | + | chr4.3:19126825-19126844 | None:intergenic | 40.0% |
| AGGGGTTAACCAGAACAATC+CGG | - | chr4.3:19127436-19127455 | MS.gene023130:intron | 45.0% | |
| ATGATCCATGATACCAGCAG+AGG | + | chr4.3:19128157-19128176 | None:intergenic | 45.0% | |
| ATTGTCTTGACTACCTCTGC+TGG | - | chr4.3:19128141-19128160 | MS.gene023130:CDS | 45.0% | |
| CACTCACTTACGGGACTATT+TGG | - | chr4.3:19127526-19127545 | MS.gene023130:intron | 45.0% | |
| CAGGTCTGGCAAAATTGTTG+TGG | - | chr4.3:19126706-19126725 | MS.gene023130:intron | 45.0% | |
| CCGTAAGTGAGTGAGACATT+TGG | + | chr4.3:19127519-19127538 | None:intergenic | 45.0% | |
| GAGGCTAGGAGAAAGAATGT+TGG | - | chr4.3:19128180-19128199 | MS.gene023130:CDS | 45.0% | |
| GCTAGGAGAAAGAATGTTGG+TGG | - | chr4.3:19128183-19128202 | MS.gene023130:CDS | 45.0% | |
| TCAAGACTCCAACGTCAATG+TGG | + | chr4.3:19127257-19127276 | None:intergenic | 45.0% | |
| TCATGGATCATGAAGAGGCT+AGG | - | chr4.3:19128166-19128185 | MS.gene023130:CDS | 45.0% | |
| TTGACACCAACATCGAAACG+AGG | + | chr4.3:19126770-19126789 | None:intergenic | 45.0% | |
| ! | GCAAAAGCATGGTATGTGGT+TGG | - | chr4.3:19126567-19126586 | MS.gene023130:intron | 45.0% |
| !! | AGATTGAAGGATGGACTGCT+AGG | - | chr4.3:19126792-19126811 | MS.gene023130:intron | 45.0% |
| !! | CTTGGGTTGGAATTGTAGAG+GGG | - | chr4.3:19127418-19127437 | MS.gene023130:intron | 45.0% |
| !! | GGAAGCGCCAAGTTATGATT+AGG | - | chr4.3:19126506-19126525 | MS.gene023130:CDS | 45.0% |
| !! | TACGTTGATGATCACAGGTC+TGG | - | chr4.3:19126692-19126711 | MS.gene023130:intron | 45.0% |
| !! | AAATTAAAATATTAAAAGAT+GGG | + | chr4.3:19127795-19127814 | None:intergenic | 5.0% |
| !! | TAAATTAAAATATTAAAAGA+TGG | + | chr4.3:19127796-19127815 | None:intergenic | 5.0% |
| CAAACACTGCCGGATTGTTC+TGG | + | chr4.3:19127448-19127467 | None:intergenic | 50.0% | |
| GACTACCTCTGCTGGTATCA+TGG | - | chr4.3:19128149-19128168 | MS.gene023130:CDS | 50.0% | |
| TAGGCTTCTTCCCTCAAGAC+AGG | - | chr4.3:19126811-19126830 | MS.gene023130:intron | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 19126445 | 19128230 | 19126445 | ID=MS.gene023130 |
| chr4.3 | mRNA | 19126445 | 19128230 | 19126445 | ID=MS.gene023130.t1;Parent=MS.gene023130 |
| chr4.3 | exon | 19128098 | 19128230 | 19128098 | ID=MS.gene023130.t1.exon1;Parent=MS.gene023130.t1 |
| chr4.3 | CDS | 19128098 | 19128230 | 19128098 | ID=cds.MS.gene023130.t1;Parent=MS.gene023130.t1 |
| chr4.3 | exon | 19127843 | 19128003 | 19127843 | ID=MS.gene023130.t1.exon2;Parent=MS.gene023130.t1 |
| chr4.3 | CDS | 19127843 | 19128003 | 19127843 | ID=cds.MS.gene023130.t1;Parent=MS.gene023130.t1 |
| chr4.3 | exon | 19126445 | 19126543 | 19126445 | ID=MS.gene023130.t1.exon3;Parent=MS.gene023130.t1 |
| chr4.3 | CDS | 19126445 | 19126543 | 19126445 | ID=cds.MS.gene023130.t1;Parent=MS.gene023130.t1 |
| Gene Sequence |
| Protein sequence |
