Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58719.t1 | NP_001275136.1 | 100 | 130 | 0 | 0 | 1 | 130 | 1 | 130 | 8.20E-68 | 266.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58719.t1 | P42798 | 99.2 | 130 | 1 | 0 | 1 | 130 | 1 | 130 | 2.6e-70 | 265.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58719.t1 | A0A1U7YEG5 | 100.0 | 130 | 0 | 0 | 1 | 130 | 1 | 130 | 5.9e-68 | 266.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049129 | MS.gene58719 | -0.815943 | 7.13E-52 | -1.69E-46 |
| MS.gene049142 | MS.gene58719 | 0.812894 | 3.37E-51 | -1.69E-46 |
| MS.gene04918 | MS.gene58719 | 0.828936 | 6.81E-55 | -1.69E-46 |
| MS.gene04920 | MS.gene58719 | 0.817564 | 3.09E-52 | -1.69E-46 |
| MS.gene049283 | MS.gene58719 | 0.810238 | 1.27E-50 | -1.69E-46 |
| MS.gene049350 | MS.gene58719 | 0.838336 | 3.05E-57 | -1.69E-46 |
| MS.gene049411 | MS.gene58719 | 0.806471 | 8.10E-50 | -1.69E-46 |
| MS.gene049441 | MS.gene58719 | 0.833634 | 4.76E-56 | -1.69E-46 |
| MS.gene049473 | MS.gene58719 | 0.810257 | 1.26E-50 | -1.69E-46 |
| MS.gene049499 | MS.gene58719 | 0.808726 | 2.69E-50 | -1.69E-46 |
| MS.gene049580 | MS.gene58719 | 0.818434 | 1.96E-52 | -1.69E-46 |
| MS.gene049680 | MS.gene58719 | 0.814973 | 1.17E-51 | -1.69E-46 |
| MS.gene049711 | MS.gene58719 | 0.805596 | 1.24E-49 | -1.69E-46 |
| MS.gene049807 | MS.gene58719 | 0.829014 | 6.52E-55 | -1.69E-46 |
| MS.gene049821 | MS.gene58719 | 0.811836 | 5.74E-51 | -1.69E-46 |
| MS.gene049824 | MS.gene58719 | 0.852515 | 4.39E-61 | -1.69E-46 |
| MS.gene049825 | MS.gene58719 | 0.859554 | 3.82E-63 | -1.69E-46 |
| MS.gene049873 | MS.gene58719 | 0.83742 | 5.25E-57 | -1.69E-46 |
| MS.gene049887 | MS.gene58719 | 0.805323 | 1.41E-49 | -1.69E-46 |
| MS.gene050300 | MS.gene58719 | -0.8056 | 1.23E-49 | -1.69E-46 |
| MS.gene050752 | MS.gene58719 | 0.83505 | 2.10E-56 | -1.69E-46 |
| MS.gene050838 | MS.gene58719 | 0.866726 | 2.31E-65 | -1.69E-46 |
| MS.gene050901 | MS.gene58719 | 0.820906 | 5.36E-53 | -1.69E-46 |
| MS.gene050945 | MS.gene58719 | 0.855744 | 5.14E-62 | -1.69E-46 |
| MS.gene050955 | MS.gene58719 | 0.837458 | 5.14E-57 | -1.69E-46 |
| MS.gene051003 | MS.gene58719 | 0.851811 | 6.96E-61 | -1.69E-46 |
| MS.gene051233 | MS.gene58719 | 0.811057 | 8.47E-51 | -1.69E-46 |
| MS.gene051234 | MS.gene58719 | 0.87498 | 4.42E-68 | -1.69E-46 |
| MS.gene051330 | MS.gene58719 | 0.803369 | 3.60E-49 | -1.69E-46 |
| MS.gene051343 | MS.gene58719 | 0.843046 | 1.78E-58 | -1.69E-46 |
| MS.gene05134 | MS.gene58719 | 0.800108 | 1.68E-48 | -1.69E-46 |
| MS.gene051676 | MS.gene58719 | 0.811559 | 6.59E-51 | -1.69E-46 |
| MS.gene051699 | MS.gene58719 | 0.845883 | 3.08E-59 | -1.69E-46 |
| MS.gene051700 | MS.gene58719 | 0.868883 | 4.69E-66 | -1.69E-46 |
| MS.gene051719 | MS.gene58719 | 0.803795 | 2.94E-49 | -1.69E-46 |
| MS.gene051720 | MS.gene58719 | 0.805529 | 1.28E-49 | -1.69E-46 |
| MS.gene051746 | MS.gene58719 | 0.825111 | 5.60E-54 | -1.69E-46 |
| MS.gene051748 | MS.gene58719 | 0.82026 | 7.53E-53 | -1.69E-46 |
| MS.gene051791 | MS.gene58719 | 0.808375 | 3.19E-50 | -1.69E-46 |
| MS.gene051885 | MS.gene58719 | 0.815704 | 8.07E-52 | -1.69E-46 |
| MS.gene05188 | MS.gene58719 | 0.857466 | 1.60E-62 | -1.69E-46 |
| MS.gene051902 | MS.gene58719 | 0.830708 | 2.52E-55 | -1.69E-46 |
| MS.gene051903 | MS.gene58719 | 0.846398 | 2.23E-59 | -1.69E-46 |
| MS.gene051975 | MS.gene58719 | 0.841021 | 6.12E-58 | -1.69E-46 |
| MS.gene052072 | MS.gene58719 | 0.828966 | 6.70E-55 | -1.69E-46 |
| MS.gene052133 | MS.gene58719 | 0.824276 | 8.81E-54 | -1.69E-46 |
| MS.gene052335 | MS.gene58719 | 0.815462 | 9.13E-52 | -1.69E-46 |
| MS.gene052342 | MS.gene58719 | 0.803549 | 3.31E-49 | -1.69E-46 |
| MS.gene052479 | MS.gene58719 | 0.803272 | 3.77E-49 | -1.69E-46 |
| MS.gene052533 | MS.gene58719 | 0.844218 | 8.66E-59 | -1.69E-46 |
| MS.gene052582 | MS.gene58719 | 0.808417 | 3.13E-50 | -1.69E-46 |
| MS.gene052584 | MS.gene58719 | 0.819823 | 9.49E-53 | -1.69E-46 |
| MS.gene052717 | MS.gene58719 | 0.802298 | 5.99E-49 | -1.69E-46 |
| MS.gene052793 | MS.gene58719 | 0.830707 | 2.52E-55 | -1.69E-46 |
| MS.gene052818 | MS.gene58719 | -0.80608 | 9.79E-50 | -1.69E-46 |
| MS.gene052889 | MS.gene58719 | 0.805373 | 1.38E-49 | -1.69E-46 |
| MS.gene052947 | MS.gene58719 | 0.895245 | 1.15E-75 | -1.69E-46 |
| MS.gene053058 | MS.gene58719 | 0.806355 | 8.56E-50 | -1.69E-46 |
| MS.gene053122 | MS.gene58719 | 0.880481 | 5.30E-70 | -1.69E-46 |
| MS.gene053195 | MS.gene58719 | 0.80856 | 2.92E-50 | -1.69E-46 |
| MS.gene053226 | MS.gene58719 | 0.837646 | 4.60E-57 | -1.69E-46 |
| MS.gene053294 | MS.gene58719 | 0.804751 | 1.86E-49 | -1.69E-46 |
| MS.gene053401 | MS.gene58719 | 0.808541 | 2.94E-50 | -1.69E-46 |
| MS.gene053581 | MS.gene58719 | 0.819537 | 1.10E-52 | -1.69E-46 |
| MS.gene053599 | MS.gene58719 | 0.804413 | 2.19E-49 | -1.69E-46 |
| MS.gene05364 | MS.gene58719 | 0.824728 | 6.90E-54 | -1.69E-46 |
| MS.gene05365 | MS.gene58719 | 0.803883 | 2.82E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene58719 | 0.827825 | 1.26E-54 | -1.69E-46 |
| MS.gene054004 | MS.gene58719 | 0.800772 | 1.23E-48 | -1.69E-46 |
| MS.gene054142 | MS.gene58719 | 0.829397 | 5.27E-55 | -1.69E-46 |
| MS.gene054222 | MS.gene58719 | 0.808952 | 2.41E-50 | -1.69E-46 |
| MS.gene054328 | MS.gene58719 | 0.824508 | 7.77E-54 | -1.69E-46 |
| MS.gene054403 | MS.gene58719 | 0.841791 | 3.84E-58 | -1.69E-46 |
| MS.gene054413 | MS.gene58719 | 0.816006 | 6.91E-52 | -1.69E-46 |
| MS.gene054651 | MS.gene58719 | 0.801534 | 8.60E-49 | -1.69E-46 |
| MS.gene05476 | MS.gene58719 | 0.801358 | 9.35E-49 | -1.69E-46 |
| MS.gene055424 | MS.gene58719 | 0.812689 | 3.74E-51 | -1.69E-46 |
| MS.gene055466 | MS.gene58719 | 0.809868 | 1.53E-50 | -1.69E-46 |
| MS.gene055468 | MS.gene58719 | 0.829485 | 5.01E-55 | -1.69E-46 |
| MS.gene055513 | MS.gene58719 | 0.840442 | 8.67E-58 | -1.69E-46 |
| MS.gene055555 | MS.gene58719 | 0.891395 | 4.13E-74 | -1.69E-46 |
| MS.gene055580 | MS.gene58719 | -0.849255 | 3.64E-60 | -1.69E-46 |
| MS.gene055603 | MS.gene58719 | 0.808949 | 2.41E-50 | -1.69E-46 |
| MS.gene055765 | MS.gene58719 | 0.815541 | 8.77E-52 | -1.69E-46 |
| MS.gene055808 | MS.gene58719 | 0.855914 | 4.58E-62 | -1.69E-46 |
| MS.gene056043 | MS.gene58719 | -0.849536 | 3.04E-60 | -1.69E-46 |
| MS.gene056075 | MS.gene58719 | 0.869415 | 3.15E-66 | -1.69E-46 |
| MS.gene056091 | MS.gene58719 | 0.858349 | 8.76E-63 | -1.69E-46 |
| MS.gene056215 | MS.gene58719 | 0.855036 | 8.26E-62 | -1.69E-46 |
| MS.gene056308 | MS.gene58719 | 0.818441 | 1.96E-52 | -1.69E-46 |
| MS.gene056403 | MS.gene58719 | 0.826586 | 2.50E-54 | -1.69E-46 |
| MS.gene056595 | MS.gene58719 | 0.804744 | 1.86E-49 | -1.69E-46 |
| MS.gene056605 | MS.gene58719 | 0.818325 | 2.08E-52 | -1.69E-46 |
| MS.gene056631 | MS.gene58719 | 0.808673 | 2.76E-50 | -1.69E-46 |
| MS.gene056699 | MS.gene58719 | 0.801799 | 7.59E-49 | -1.69E-46 |
| MS.gene05689 | MS.gene58719 | 0.862226 | 5.89E-64 | -1.69E-46 |
| MS.gene056986 | MS.gene58719 | 0.844239 | 8.55E-59 | -1.69E-46 |
| MS.gene057094 | MS.gene58719 | 0.82459 | 7.43E-54 | -1.69E-46 |
| MS.gene057102 | MS.gene58719 | 0.897455 | 1.38E-76 | -1.69E-46 |
| MS.gene057684 | MS.gene58719 | -0.806824 | 6.82E-50 | -1.69E-46 |
| MS.gene057694 | MS.gene58719 | 0.812806 | 3.52E-51 | -1.69E-46 |
| MS.gene057705 | MS.gene58719 | 0.879669 | 1.03E-69 | -1.69E-46 |
| MS.gene05781 | MS.gene58719 | 0.832622 | 8.51E-56 | -1.69E-46 |
| MS.gene057890 | MS.gene58719 | -0.817448 | 3.28E-52 | -1.69E-46 |
| MS.gene057893 | MS.gene58719 | -0.831897 | 1.29E-55 | -1.69E-46 |
| MS.gene058008 | MS.gene58719 | 0.807238 | 5.57E-50 | -1.69E-46 |
| MS.gene058074 | MS.gene58719 | 0.812935 | 3.30E-51 | -1.69E-46 |
| MS.gene058149 | MS.gene58719 | 0.806194 | 9.26E-50 | -1.69E-46 |
| MS.gene058159 | MS.gene58719 | 0.822551 | 2.23E-53 | -1.69E-46 |
| MS.gene058394 | MS.gene58719 | 0.814609 | 1.41E-51 | -1.69E-46 |
| MS.gene058492 | MS.gene58719 | 0.812027 | 5.21E-51 | -1.69E-46 |
| MS.gene058668 | MS.gene58719 | 0.801667 | 8.08E-49 | -1.69E-46 |
| MS.gene058852 | MS.gene58719 | 0.826189 | 3.11E-54 | -1.69E-46 |
| MS.gene059146 | MS.gene58719 | 0.853533 | 2.24E-61 | -1.69E-46 |
| MS.gene059227 | MS.gene58719 | 0.880954 | 3.59E-70 | -1.69E-46 |
| MS.gene05950 | MS.gene58719 | 0.803379 | 3.58E-49 | -1.69E-46 |
| MS.gene05953 | MS.gene58719 | 0.820113 | 8.14E-53 | -1.69E-46 |
| MS.gene05954 | MS.gene58719 | 0.832864 | 7.41E-56 | -1.69E-46 |
| MS.gene059625 | MS.gene58719 | 0.814966 | 1.18E-51 | -1.69E-46 |
| MS.gene059778 | MS.gene58719 | 0.805003 | 1.65E-49 | -1.69E-46 |
| MS.gene05985 | MS.gene58719 | -0.869108 | 3.96E-66 | -1.69E-46 |
| MS.gene059901 | MS.gene58719 | -0.850373 | 1.77E-60 | -1.69E-46 |
| MS.gene059935 | MS.gene58719 | 0.854985 | 8.54E-62 | -1.69E-46 |
| MS.gene06001 | MS.gene58719 | 0.853592 | 2.16E-61 | -1.69E-46 |
| MS.gene06011 | MS.gene58719 | 0.847737 | 9.57E-60 | -1.69E-46 |
| MS.gene060365 | MS.gene58719 | 0.853727 | 1.97E-61 | -1.69E-46 |
| MS.gene060429 | MS.gene58719 | 0.870834 | 1.08E-66 | -1.69E-46 |
| MS.gene060512 | MS.gene58719 | 0.817837 | 2.68E-52 | -1.69E-46 |
| MS.gene060587 | MS.gene58719 | 0.806079 | 9.79E-50 | -1.69E-46 |
| MS.gene060763 | MS.gene58719 | 0.868514 | 6.17E-66 | -1.69E-46 |
| MS.gene060766 | MS.gene58719 | 0.800371 | 1.49E-48 | -1.69E-46 |
| MS.gene060830 | MS.gene58719 | 0.829954 | 3.86E-55 | -1.69E-46 |
| MS.gene060917 | MS.gene58719 | 0.839284 | 1.74E-57 | -1.69E-46 |
| MS.gene060935 | MS.gene58719 | 0.81811 | 2.33E-52 | -1.69E-46 |
| MS.gene060937 | MS.gene58719 | 0.823514 | 1.33E-53 | -1.69E-46 |
| MS.gene061100 | MS.gene58719 | 0.872095 | 4.14E-67 | -1.69E-46 |
| MS.gene061160 | MS.gene58719 | 0.843596 | 1.27E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene55887 | MS.gene58719 | PPI |
| MS.gene20156 | MS.gene58719 | PPI |
| MS.gene58719 | MS.gene049026 | PPI |
| MS.gene58719 | MS.gene023130 | PPI |
| MS.gene58719 | MS.gene06172 | PPI |
| MS.gene041458 | MS.gene58719 | PPI |
| MS.gene36468 | MS.gene58719 | PPI |
| MS.gene58719 | MS.gene58227 | PPI |
| MS.gene036595 | MS.gene58719 | PPI |
| MS.gene028323 | MS.gene58719 | PPI |
| MS.gene35135 | MS.gene58719 | PPI |
| MS.gene58719 | MS.gene036595 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58719.t1 | MTR_4g117470 | 100.000 | 130 | 0 | 0 | 1 | 130 | 1 | 130 | 1.05e-93 | 266 |
| MS.gene58719.t1 | MTR_4g094598 | 99.231 | 130 | 1 | 0 | 1 | 130 | 1 | 130 | 2.82e-93 | 265 |
| MS.gene58719.t1 | MTR_1g105415 | 99.231 | 130 | 1 | 0 | 1 | 130 | 1 | 130 | 2.82e-93 | 265 |
| MS.gene58719.t1 | MTR_8g101910 | 52.000 | 125 | 60 | 0 | 6 | 130 | 5 | 129 | 1.82e-45 | 144 |
| MS.gene58719.t1 | MTR_8g101910 | 49.474 | 95 | 48 | 0 | 6 | 100 | 5 | 99 | 1.72e-28 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58719.t1 | AT5G59850 | 99.231 | 130 | 1 | 0 | 1 | 130 | 1 | 130 | 1.76e-93 | 265 |
| MS.gene58719.t1 | AT1G07770 | 99.231 | 130 | 1 | 0 | 1 | 130 | 1 | 130 | 1.76e-93 | 265 |
| MS.gene58719.t1 | AT1G07770 | 99.231 | 130 | 1 | 0 | 1 | 130 | 1 | 130 | 1.76e-93 | 265 |
| MS.gene58719.t1 | AT1G07770 | 99.231 | 130 | 1 | 0 | 1 | 130 | 1 | 130 | 1.76e-93 | 265 |
| MS.gene58719.t1 | AT3G46040 | 97.692 | 130 | 3 | 0 | 1 | 130 | 1 | 130 | 4.03e-92 | 262 |
| MS.gene58719.t1 | AT2G39590 | 91.538 | 130 | 11 | 0 | 1 | 130 | 1 | 130 | 4.30e-87 | 249 |
| MS.gene58719.t1 | AT4G29430 | 54.400 | 125 | 57 | 0 | 6 | 130 | 5 | 129 | 2.98e-47 | 149 |
| MS.gene58719.t1 | AT2G19720 | 53.600 | 125 | 58 | 0 | 6 | 130 | 5 | 129 | 3.11e-45 | 144 |
Find 30 sgRNAs with CRISPR-Local
Find 95 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACCACTTCTGCTGGTATTA+TGG | 0.215449 | 8.1:-9860574 | MS.gene58719:CDS |
| TTATGCTTTATAGGTTATAT+TGG | 0.301097 | 8.1:-9861786 | MS.gene58719:intron |
| TATGATTAGGCCTTCCTCTA+AGG | 0.385448 | 8.1:-9861970 | MS.gene58719:CDS |
| GAATTTGATGATGACCTTAG+AGG | 0.411030 | 8.1:+9861956 | None:intergenic |
| GAAAGCGTCAAGTTATGATT+AGG | 0.452540 | 8.1:-9861983 | MS.gene58719:CDS |
| TATGTTGATGATCACAGATC+TGG | 0.452973 | 8.1:-9861753 | MS.gene58719:CDS |
| GGTCCTTGGCTTCTTCTACT+AGG | 0.468896 | 8.1:-9860514 | None:intergenic |
| AATGTTGGTGGTAAGGTCCT+TGG | 0.482167 | 8.1:-9860528 | MS.gene58719:CDS |
| AAAATCGTTGTTGAATTGAA+TGG | 0.485579 | 8.1:-9861729 | MS.gene58719:CDS |
| GAGAAAGAATGTTGGTGGTA+AGG | 0.495772 | 8.1:-9860535 | MS.gene58719:CDS |
| ATGGTAGGTTGAACAAATGT+GGG | 0.519393 | 8.1:-9861710 | MS.gene58719:CDS |
| ATCCATAATACCAGCAGAAG+TGG | 0.531152 | 8.1:+9860572 | None:intergenic |
| TAGACTTCTCCCTTCCAGAC+AGG | 0.537117 | 8.1:-9861634 | MS.gene58719:intron |
| ATGTACAATGCTGAGAAAAG+AGG | 0.544704 | 8.1:-9862005 | MS.gene58719:CDS |
| TTCAACTGACCTGTCTGGAA+GGG | 0.545440 | 8.1:+9861625 | None:intergenic |
| TTTCAACTGACCTGTCTGGA+AGG | 0.549780 | 8.1:+9861624 | None:intergenic |
| ATGTTGATGATCACAGATCT+GGG | 0.565212 | 8.1:-9861752 | MS.gene58719:CDS |
| GCTAGGAGAAAGAATGTTGG+TGG | 0.567141 | 8.1:-9860540 | MS.gene58719:CDS |
| TAGCCTAGTAGAAGAAGCCA+AGG | 0.575489 | 8.1:+9860511 | None:intergenic |
| AATGGTAGGTTGAACAAATG+TGG | 0.577364 | 8.1:-9861711 | MS.gene58719:CDS |
| GAGGCTAGGAGAAAGAATGT+TGG | 0.584494 | 8.1:-9860543 | MS.gene58719:CDS |
| TTATGGATCATGAAGAGGCT+AGG | 0.585160 | 8.1:-9860557 | MS.gene58719:CDS |
| TGGTATTATGGATCATGAAG+AGG | 0.606467 | 8.1:-9860562 | MS.gene58719:CDS |
| TTGATGATGACCTTAGAGGA+AGG | 0.613228 | 8.1:+9861960 | None:intergenic |
| GTCGGTGTCAAGGAGATTGA+AGG | 0.613514 | 8.1:-9861666 | MS.gene58719:CDS |
| TCGTTGTTGAATTGAATGGT+AGG | 0.614641 | 8.1:-9861725 | MS.gene58719:CDS |
| CAAAACACTGACTCTCACCA+TGG | 0.638914 | 8.1:+9862046 | None:intergenic |
| GTGTCAAGGAGATTGAAGGT+TGG | 0.653545 | 8.1:-9861662 | MS.gene58719:CDS |
| TGGTAGGTTGAACAAATGTG+GGG | 0.708928 | 8.1:-9861709 | MS.gene58719:CDS |
| TTGACACCGACATCAAAACG+AGG | 0.734537 | 8.1:+9861678 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCTTAAATAATAACAATTTA+AGG | + | chr8.1:9861849-9861868 | None:intergenic | 10.0% |
| !! | CTAAAATTGATCATAAAAAA+CGG | + | chr8.1:9861725-9861744 | None:intergenic | 15.0% |
| !! | TAATTATAAAATATGCAGTT+TGG | - | chr8.1:9861950-9861969 | MS.gene58719:CDS | 15.0% |
| !!! | AACTTAATTTATCTTTTGAT+AGG | - | chr8.1:9861135-9861154 | MS.gene58719:intron | 15.0% |
| !!! | TGAAAACAATACTAATTTTT+GGG | - | chr8.1:9860953-9860972 | MS.gene58719:intron | 15.0% |
| !!! | TTGAAAACAATACTAATTTT+TGG | - | chr8.1:9860952-9860971 | MS.gene58719:intron | 15.0% |
| !!! | TTGATTTGATATAATTTTGT+GGG | - | chr8.1:9860698-9860717 | MS.gene58719:intron | 15.0% |
| !!! | TTTGATTTGATATAATTTTG+TGG | - | chr8.1:9860697-9860716 | MS.gene58719:intron | 15.0% |
| !!! | TTTGATTTGATATATTTTGT+GGG | - | chr8.1:9860750-9860769 | MS.gene58719:intron | 15.0% |
| !!! | TTTTGATTTGATATATTTTG+TGG | - | chr8.1:9860749-9860768 | MS.gene58719:intron | 15.0% |
| !! | AAAACTAATAAATGTTGCAT+TGG | + | chr8.1:9861246-9861265 | None:intergenic | 20.0% |
| !! | GGATGAAATTCATTAAATAA+GGG | + | chr8.1:9861282-9861301 | None:intergenic | 20.0% |
| !! | TGGATGAAATTCATTAAATA+AGG | + | chr8.1:9861283-9861302 | None:intergenic | 20.0% |
| !! | TTATGCTTTATAGGTTATAT+TGG | - | chr8.1:9860773-9860792 | MS.gene58719:intron | 20.0% |
| !! | TTGCATGATTCAATTATTTA+GGG | - | chr8.1:9860673-9860692 | MS.gene58719:intron | 20.0% |
| !!! | AAAAAACGGAGATTTTTTTT+AGG | + | chr8.1:9861711-9861730 | None:intergenic | 20.0% |
| !!! | ATATTTTTTCCTTTCATTGA+AGG | - | chr8.1:9860650-9860669 | MS.gene58719:intron | 20.0% |
| !!! | ATTAATTGTGTTGATTTCAA+TGG | + | chr8.1:9861366-9861385 | None:intergenic | 20.0% |
| !!! | ATTTAACTTATATGAACGTT+GGG | - | chr8.1:9861875-9861894 | MS.gene58719:intron | 20.0% |
| !!! | TATTTAACTTATATGAACGT+TGG | - | chr8.1:9861874-9861893 | MS.gene58719:intron | 20.0% |
| ! | AAAATCGTTGTTGAATTGAA+TGG | - | chr8.1:9860830-9860849 | MS.gene58719:intron | 25.0% |
| ! | AAACAACATATACACACAAA+AGG | + | chr8.1:9861906-9861925 | None:intergenic | 25.0% |
| ! | GTTGCATGATTCAATTATTT+AGG | - | chr8.1:9860672-9860691 | MS.gene58719:intron | 25.0% |
| ! | TATAGTTTCTTACTCCTATT+TGG | - | chr8.1:9861656-9861675 | MS.gene58719:CDS | 25.0% |
| ! | TCATGCTTCATATTAAAGAT+TGG | - | chr8.1:9861620-9861639 | MS.gene58719:intron | 25.0% |
| !! | TATAATTTTGTGGGTATGTT+TGG | - | chr8.1:9860707-9860726 | MS.gene58719:intron | 25.0% |
| !! | TGATTTGGAACAAATTTACT+CGG | + | chr8.1:9861593-9861612 | None:intergenic | 25.0% |
| !!! | TCAGCTTATTTTCATAAACA+TGG | - | chr8.1:9861086-9861105 | MS.gene58719:intron | 25.0% |
| !!! | TTTGGTGGTTCAATTTTTTA+GGG | - | chr8.1:9860725-9860744 | MS.gene58719:intron | 25.0% |
| AAACGACTAATATTGTGAGA+CGG | - | chr8.1:9861415-9861434 | MS.gene58719:intron | 30.0% | |
| AAGCATGAACTATCATGATT+TGG | + | chr8.1:9861608-9861627 | None:intergenic | 30.0% | |
| AAGTTCACACAAATATGCAT+TGG | + | chr8.1:9861520-9861539 | None:intergenic | 30.0% | |
| ACACCCTTATTAATTGTAGT+TGG | + | chr8.1:9861320-9861339 | None:intergenic | 30.0% | |
| ATTTACTCGGCTTAACAAAA+TGG | + | chr8.1:9861580-9861599 | None:intergenic | 30.0% | |
| CATAGCTATATGTAAGAACA+TGG | + | chr8.1:9861481-9861500 | None:intergenic | 30.0% | |
| CCACCAACTACAATTAATAA+GGG | - | chr8.1:9861314-9861333 | MS.gene58719:intron | 30.0% | |
| CTCACAATATTAGTCGTTTA+AGG | + | chr8.1:9861414-9861433 | None:intergenic | 30.0% | |
| TATCACTTGTGAGAATGTTT+GGG | - | chr8.1:9861021-9861040 | MS.gene58719:intron | 30.0% | |
| TCCACCAACTACAATTAATA+AGG | - | chr8.1:9861313-9861332 | MS.gene58719:intron | 30.0% | |
| TTATCACTTGTGAGAATGTT+TGG | - | chr8.1:9861020-9861039 | MS.gene58719:intron | 30.0% | |
| TTTGGGAGAACTTATGAAAA+CGG | - | chr8.1:9861038-9861057 | MS.gene58719:intron | 30.0% | |
| !! | TCAATTTTAGCCTTTACTAG+AGG | - | chr8.1:9861735-9861754 | MS.gene58719:CDS | 30.0% |
| !! | TTTTGTGGGTTATGCTTTAT+AGG | - | chr8.1:9860764-9860783 | MS.gene58719:intron | 30.0% |
| !!! | GTTTGGTGGTTCAATTTTTT+AGG | - | chr8.1:9860724-9860743 | MS.gene58719:intron | 30.0% |
| ACACAAATATGCATTGGAAG+TGG | + | chr8.1:9861514-9861533 | None:intergenic | 35.0% | |
| AGGTTTGTGCACGATTATTA+AGG | + | chr8.1:9861394-9861413 | None:intergenic | 35.0% | |
| AGTAAGCTGTTTATCCAAAC+AGG | - | chr8.1:9861454-9861473 | MS.gene58719:intron | 35.0% | |
| ATCATGCAACCTTCAATGAA+AGG | + | chr8.1:9860662-9860681 | None:intergenic | 35.0% | |
| ATGTACAATGCTGAGAAAAG+AGG | - | chr8.1:9860554-9860573 | MS.gene58719:CDS | 35.0% | |
| CACATAAAAGCCTCTAGTAA+AGG | + | chr8.1:9861748-9861767 | None:intergenic | 35.0% | |
| CCCTTATTAATTGTAGTTGG+TGG | + | chr8.1:9861317-9861336 | None:intergenic | 35.0% | |
| CTCATCGTTATGCAAAAACA+CGG | - | chr8.1:9860626-9860645 | MS.gene58719:intron | 35.0% | |
| TCGTTGTTGAATTGAATGGT+AGG | - | chr8.1:9860834-9860853 | MS.gene58719:intron | 35.0% | |
| TGGTATTATGGATCATGAAG+AGG | - | chr8.1:9861997-9862016 | MS.gene58719:CDS | 35.0% | |
| TTGTTCCACAAAGACCAAAT+AGG | + | chr8.1:9861673-9861692 | None:intergenic | 35.0% | |
| ! | AATGGTAGGTTGAACAAATG+TGG | - | chr8.1:9860848-9860867 | MS.gene58719:intron | 35.0% |
| ! | AATTTTGTGGGTATGTTTGG+TGG | - | chr8.1:9860710-9860729 | MS.gene58719:intron | 35.0% |
| ! | ATGGTAGGTTGAACAAATGT+GGG | - | chr8.1:9860849-9860868 | MS.gene58719:intron | 35.0% |
| ! | ATTTGTTGCTTGGATGATCT+AGG | - | chr8.1:9861797-9861816 | MS.gene58719:intron | 35.0% |
| ! | TTACTAGAGGCTTTTATGTG+TGG | - | chr8.1:9861748-9861767 | MS.gene58719:CDS | 35.0% |
| ! | TTACTCCTATTTGGTCTTTG+TGG | - | chr8.1:9861665-9861684 | MS.gene58719:CDS | 35.0% |
| !! | ATGTTGATGATCACAGATCT+GGG | - | chr8.1:9860807-9860826 | MS.gene58719:intron | 35.0% |
| !! | ATTAGTCCTCGTTTTGATGT+CGG | - | chr8.1:9860875-9860894 | MS.gene58719:intron | 35.0% |
| !! | GAAAGCGTCAAGTTATGATT+AGG | - | chr8.1:9860576-9860595 | MS.gene58719:CDS | 35.0% |
| !! | GAATTTGATGATGACCTTAG+AGG | + | chr8.1:9860606-9860625 | None:intergenic | 35.0% |
| !! | TATGTTGATGATCACAGATC+TGG | - | chr8.1:9860806-9860825 | MS.gene58719:intron | 35.0% |
| !! | TCTGTCAACAATTTGTTGCT+TGG | - | chr8.1:9861787-9861806 | MS.gene58719:intron | 35.0% |
| ATCCATAATACCAGCAGAAG+TGG | + | chr8.1:9861990-9862009 | None:intergenic | 40.0% | |
| GACTAATATTGTGAGACGGA+GGG | - | chr8.1:9861419-9861438 | MS.gene58719:intron | 40.0% | |
| TATGATTAGGCCTTCCTCTA+AGG | - | chr8.1:9860589-9860608 | MS.gene58719:CDS | 40.0% | |
| TGTAAGAACATGGTCCTGTT+TGG | + | chr8.1:9861471-9861490 | None:intergenic | 40.0% | |
| TTATGGATCATGAAGAGGCT+AGG | - | chr8.1:9862002-9862021 | MS.gene58719:CDS | 40.0% | |
| ! | CTTCAGTGTTATCGATTGCA+TGG | - | chr8.1:9861551-9861570 | MS.gene58719:intron | 40.0% |
| ! | TGGTAGGTTGAACAAATGTG+GGG | - | chr8.1:9860850-9860869 | MS.gene58719:intron | 40.0% |
| ! | TTCTTTTGCATAGTGTCTGC+TGG | - | chr8.1:9860980-9860999 | MS.gene58719:intron | 40.0% |
| ! | TTGTTTTCAACTGACCTGTC+TGG | + | chr8.1:9860942-9860961 | None:intergenic | 40.0% |
| !! | AGTTGGTGGAGTAGTTAAGT+TGG | + | chr8.1:9861303-9861322 | None:intergenic | 40.0% |
| !! | CGTGTTTTTGCATAACGATG+AGG | + | chr8.1:9860628-9860647 | None:intergenic | 40.0% |
| !! | GAGAAAGAATGTTGGTGGTA+AGG | - | chr8.1:9862024-9862043 | MS.gene58719:CDS | 40.0% |
| !! | TTGATGATGACCTTAGAGGA+AGG | + | chr8.1:9860602-9860621 | None:intergenic | 40.0% |
| !!! | ATTGTTTTGACCACTTCTGC+TGG | - | chr8.1:9861977-9861996 | MS.gene58719:CDS | 40.0% |
| CGACTAATATTGTGAGACGG+AGG | - | chr8.1:9861418-9861437 | MS.gene58719:intron | 45.0% | |
| GACCACTTCTGCTGGTATTA+TGG | - | chr8.1:9861985-9862004 | MS.gene58719:CDS | 45.0% | |
| GAGGCTAGGAGAAAGAATGT+TGG | - | chr8.1:9862016-9862035 | MS.gene58719:CDS | 45.0% | |
| GCTAGGAGAAAGAATGTTGG+TGG | - | chr8.1:9862019-9862038 | MS.gene58719:CDS | 45.0% | |
| GTGTCAAGGAGATTGAAGGT+TGG | - | chr8.1:9860897-9860916 | MS.gene58719:intron | 45.0% | |
| TTCAACTGACCTGTCTGGAA+GGG | + | chr8.1:9860937-9860956 | None:intergenic | 45.0% | |
| TTGACACCGACATCAAAACG+AGG | + | chr8.1:9860884-9860903 | None:intergenic | 45.0% | |
| TTTCAACTGACCTGTCTGGA+AGG | + | chr8.1:9860938-9860957 | None:intergenic | 45.0% | |
| !! | AATGTTGGTGGTAAGGTCCT+TGG | - | chr8.1:9862031-9862050 | MS.gene58719:CDS | 45.0% |
| !!! | TCGTTTTGATGTCGGTGTCA+AGG | - | chr8.1:9860883-9860902 | MS.gene58719:intron | 45.0% |
| !! | TTATAATTATAAAAATGTAA+GGG | + | chr8.1:9861939-9861958 | None:intergenic | 5.0% |
| !! | TTTATAATTATAAAAATGTA+AGG | + | chr8.1:9861940-9861959 | None:intergenic | 5.0% |
| TAGACTTCTCCCTTCCAGAC+AGG | - | chr8.1:9860925-9860944 | MS.gene58719:intron | 50.0% | |
| !! | GTCGGTGTCAAGGAGATTGA+AGG | - | chr8.1:9860893-9860912 | MS.gene58719:intron | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 9860515 | 9862066 | 9860515 | ID=MS.gene58719 |
| chr8.1 | mRNA | 9860515 | 9862066 | 9860515 | ID=MS.gene58719.t1;Parent=MS.gene58719 |
| chr8.1 | exon | 9861934 | 9862066 | 9861934 | ID=MS.gene58719.t1.exon1;Parent=MS.gene58719.t1 |
| chr8.1 | CDS | 9861934 | 9862066 | 9861934 | ID=cds.MS.gene58719.t1;Parent=MS.gene58719.t1 |
| chr8.1 | exon | 9861635 | 9861795 | 9861635 | ID=MS.gene58719.t1.exon2;Parent=MS.gene58719.t1 |
| chr8.1 | CDS | 9861635 | 9861795 | 9861635 | ID=cds.MS.gene58719.t1;Parent=MS.gene58719.t1 |
| chr8.1 | exon | 9860515 | 9860613 | 9860515 | ID=MS.gene58719.t1.exon3;Parent=MS.gene58719.t1 |
| chr8.1 | CDS | 9860515 | 9860613 | 9860515 | ID=cds.MS.gene58719.t1;Parent=MS.gene58719.t1 |
| Gene Sequence |
| Protein sequence |
