Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024386.t1 | XP_003626612.1 | 80.1 | 186 | 30 | 3 | 1 | 185 | 1 | 180 | 1.70E-71 | 278.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024386.t1 | Q8LCA1 | 56.8 | 183 | 62 | 4 | 5 | 182 | 2 | 172 | 4.0e-48 | 192.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024386.t1 | Q2HTB6 | 80.1 | 186 | 30 | 3 | 1 | 185 | 1 | 180 | 1.3e-71 | 278.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene98588 | MS.gene024386 | PPI |
| MS.gene48506 | MS.gene024386 | PPI |
| MS.gene044778 | MS.gene024386 | PPI |
| MS.gene88194 | MS.gene024386 | PPI |
| MS.gene039151 | MS.gene024386 | PPI |
| MS.gene040618 | MS.gene024386 | PPI |
| MS.gene054642 | MS.gene024386 | PPI |
| MS.gene66718 | MS.gene024386 | PPI |
| MS.gene38715 | MS.gene024386 | PPI |
| MS.gene012982 | MS.gene024386 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024386.t1 | MTR_7g118290 | 91.279 | 172 | 8 | 3 | 15 | 185 | 15 | 180 | 1.41e-109 | 310 |
| MS.gene024386.t1 | MTR_7g118290 | 79.070 | 172 | 8 | 4 | 15 | 185 | 15 | 159 | 6.11e-88 | 255 |
| MS.gene024386.t1 | MTR_7g118290 | 80.435 | 138 | 15 | 5 | 15 | 151 | 15 | 141 | 5.44e-68 | 204 |
| MS.gene024386.t1 | MTR_8g024180 | 56.962 | 158 | 52 | 3 | 25 | 182 | 27 | 168 | 5.81e-50 | 159 |
| MS.gene024386.t1 | MTR_4g013200 | 35.172 | 145 | 86 | 1 | 38 | 182 | 9 | 145 | 3.59e-25 | 95.5 |
| MS.gene024386.t1 | MTR_7g116795 | 31.410 | 156 | 89 | 3 | 29 | 184 | 24 | 161 | 4.83e-21 | 85.1 |
| MS.gene024386.t1 | MTR_5g032440 | 28.696 | 115 | 81 | 1 | 69 | 182 | 67 | 181 | 7.78e-15 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024386.t1 | AT2G46820 | 63.265 | 147 | 45 | 2 | 36 | 182 | 35 | 172 | 1.56e-56 | 176 |
| MS.gene024386.t1 | AT2G46820 | 63.265 | 147 | 45 | 2 | 36 | 182 | 35 | 172 | 1.56e-56 | 176 |
| MS.gene024386.t1 | AT1G52220 | 47.525 | 101 | 52 | 1 | 82 | 182 | 56 | 155 | 1.78e-26 | 99.0 |
| MS.gene024386.t1 | AT1G52220 | 47.525 | 101 | 51 | 2 | 82 | 182 | 56 | 154 | 1.04e-24 | 94.4 |
| MS.gene024386.t1 | AT4G01150 | 32.919 | 161 | 87 | 4 | 25 | 182 | 20 | 162 | 4.00e-23 | 90.5 |
| MS.gene024386.t1 | AT4G38100 | 35.789 | 95 | 58 | 1 | 91 | 185 | 101 | 192 | 1.14e-14 | 69.3 |
| MS.gene024386.t1 | AT4G38100 | 35.789 | 95 | 58 | 1 | 91 | 185 | 61 | 152 | 1.84e-14 | 67.8 |
| MS.gene024386.t1 | AT1G52220 | 46.479 | 71 | 37 | 1 | 82 | 152 | 56 | 125 | 2.63e-13 | 64.3 |
| MS.gene024386.t1 | AT1G52220 | 52.000 | 50 | 24 | 0 | 133 | 182 | 77 | 126 | 1.96e-12 | 61.6 |
Find 53 sgRNAs with CRISPR-Local
Find 127 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTATAGTCTTTAGAAATTC+TGG | 0.176189 | 7.2:+364631 | None:intergenic |
| GATAGGCTTCCTTTAATTCC+TGG | 0.266011 | 7.2:-363292 | MS.gene024386:CDS |
| TCTTCATTCACTCTTATTGA+TGG | 0.283095 | 7.2:-364963 | MS.gene024386:CDS |
| ACAGAAAGCGGTGGTCTTCC+AGG | 0.290167 | 7.2:+364854 | None:intergenic |
| GTTGCATTATGGGGCTCAGC+TGG | 0.318460 | 7.2:-363423 | MS.gene024386:CDS |
| TCAAGAACCCCAGGAATTAA+AGG | 0.320013 | 7.2:+363283 | None:intergenic |
| TAGCAGGTACGGTTGCATTA+TGG | 0.322048 | 7.2:-363434 | MS.gene024386:CDS |
| AGCAGGTACGGTTGCATTAT+GGG | 0.357874 | 7.2:-363433 | MS.gene024386:CDS |
| ATAGGCTTCCTTTAATTCCT+GGG | 0.369347 | 7.2:-363291 | MS.gene024386:CDS |
| AAGAGTGAATGAAGAGAAAG+TGG | 0.378344 | 7.2:+364971 | None:intergenic |
| TGGTCTTCCAGGGACGAGTA+TGG | 0.381671 | 7.2:+364865 | None:intergenic |
| GCTTTGATACGCAAAATAAA+AGG | 0.394589 | 7.2:-363016 | MS.gene024386:CDS |
| TTGCATTATGGGGCTCAGCT+GGG | 0.412672 | 7.2:-363422 | MS.gene024386:CDS |
| GAAAGTGGAAGATGAGGCTG+AGG | 0.422883 | 7.2:+364986 | None:intergenic |
| TGATGAAACAGGCTATTGAT+AGG | 0.459015 | 7.2:-363309 | MS.gene024386:intron |
| ACCGATCTGGCTTGAAAACT+AGG | 0.468356 | 7.2:+363117 | None:intergenic |
| TGGAGAAGCAGAGTGTCTGC+AGG | 0.469794 | 7.2:+364932 | None:intergenic |
| TGCTCTAGCTGTAGCAGGTA+CGG | 0.487789 | 7.2:-363445 | MS.gene024386:CDS |
| TGCATTATGGGGCTCAGCTG+GGG | 0.492851 | 7.2:-363421 | MS.gene024386:CDS |
| TGGGACTGAACAGGTGGAGG+GGG | 0.502807 | 7.2:+364885 | None:intergenic |
| ATCTGCCTCTGTTTCTGTTG+TGG | 0.505718 | 7.2:+364708 | None:intergenic |
| TTCAGTCCCATACTCGTCCC+TGG | 0.506421 | 7.2:-364872 | MS.gene024386:CDS |
| CTCGTAGGCATTGGCTACAC+TGG | 0.508236 | 7.2:-363259 | MS.gene024386:CDS |
| GTTCTTGAACTCGTAGGCAT+TGG | 0.511626 | 7.2:-363268 | MS.gene024386:CDS |
| GGACGAGTATGGGACTGAAC+AGG | 0.517757 | 7.2:+364876 | None:intergenic |
| TGCTCGCAATGTTATGTCCA+TGG | 0.518500 | 7.2:-364740 | MS.gene024386:CDS |
| AGTGGAAGATGAGGCTGAGG+AGG | 0.528576 | 7.2:+364989 | None:intergenic |
| GTGAGTGCTCTAGCTGTAGC+AGG | 0.528606 | 7.2:-363450 | MS.gene024386:CDS |
| GGCACTGTTAAAGACATCAC+TGG | 0.529095 | 7.2:-362995 | MS.gene024386:CDS |
| GGTCTTCCAGGGACGAGTAT+GGG | 0.539747 | 7.2:+364866 | None:intergenic |
| AGAATCAGTGACAGTAGTAC+TGG | 0.542464 | 7.2:+364654 | None:intergenic |
| AAGAGCATAGCATACCGATC+TGG | 0.544761 | 7.2:+363104 | None:intergenic |
| GTATGGGACTGAACAGGTGG+AGG | 0.553903 | 7.2:+364882 | None:intergenic |
| TAGGCTTCCTTTAATTCCTG+GGG | 0.554551 | 7.2:-363290 | MS.gene024386:CDS |
| TGTTGTGGTACTTGAAGCCA+TGG | 0.559345 | 7.2:+364723 | None:intergenic |
| AGTTGAGGCAACCTCTGTTG+TGG | 0.572988 | 7.2:+364681 | None:intergenic |
| TATGGGACTGAACAGGTGGA+GGG | 0.576384 | 7.2:+364883 | None:intergenic |
| CAGAAAGCGGTGGTCTTCCA+GGG | 0.585352 | 7.2:+364855 | None:intergenic |
| TGTATTTGACTTACAGAAAG+CGG | 0.587004 | 7.2:+364842 | None:intergenic |
| CGAGTATGGGACTGAACAGG+TGG | 0.598195 | 7.2:+364879 | None:intergenic |
| AGTAGTACTGGTGTCAGTTG+AGG | 0.598742 | 7.2:+364666 | None:intergenic |
| ATGGGACTGAACAGGTGGAG+GGG | 0.599012 | 7.2:+364884 | None:intergenic |
| GCAGGTACGGTTGCATTATG+GGG | 0.601282 | 7.2:-363432 | MS.gene024386:CDS |
| TGAAGAGAAAGTGGAAGATG+AGG | 0.604075 | 7.2:+364980 | None:intergenic |
| GTTGGAAGGCTCACACATTG+TGG | 0.610597 | 7.2:+364912 | None:intergenic |
| CCTGGGGTTCTTGAACTCGT+AGG | 0.612235 | 7.2:-363274 | MS.gene024386:CDS |
| CCTACGAGTTCAAGAACCCC+AGG | 0.617642 | 7.2:+363274 | None:intergenic |
| GGAGAAGCAGAGTGTCTGCA+GGG | 0.624844 | 7.2:+364933 | None:intergenic |
| GCACTGTTAAAGACATCACT+GGG | 0.652022 | 7.2:-362994 | MS.gene024386:CDS |
| GGCAGATGCAGCCACAACAG+AGG | 0.654208 | 7.2:-364692 | MS.gene024386:CDS |
| AAGTACCACAACAGAAACAG+AGG | 0.689454 | 7.2:-364713 | MS.gene024386:CDS |
| ATTTGACTTACAGAAAGCGG+TGG | 0.698122 | 7.2:+364845 | None:intergenic |
| GAAGCAGAGTGTCTGCAGGG+AGG | 0.716854 | 7.2:+364936 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+AGG | - | chr7.2:363416-363435 | MS.gene024386:CDS | 0.0% |
| !! | AATATATATTATATGCAAAA+AGG | + | chr7.2:364600-364619 | None:intergenic | 10.0% |
| !! | AATTAATAATATATAATTGC+AGG | - | chr7.2:364933-364952 | MS.gene024386:CDS | 10.0% |
| !! | ATTAATAATATATAATTGCA+GGG | - | chr7.2:364934-364953 | MS.gene024386:CDS | 10.0% |
| !! | TAAATGTAAAATTACATAAA+AGG | - | chr7.2:363625-363644 | MS.gene024386:intron | 10.0% |
| !!! | AAATGTGTTTTAATATATAA+AGG | - | chr7.2:364189-364208 | MS.gene024386:intron | 10.0% |
| !!! | AATGTGTTTTAATATATAAA+GGG | - | chr7.2:364190-364209 | MS.gene024386:intron | 10.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | - | chr7.2:363780-363799 | MS.gene024386:intron | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | - | chr7.2:363779-363798 | MS.gene024386:intron | 15.0% |
| !! | TTTCATTAAAATAACTGAAA+TGG | + | chr7.2:364084-364103 | None:intergenic | 15.0% |
| !!! | GGTTTTAATTAAAATAACAA+GGG | - | chr7.2:364221-364240 | MS.gene024386:intron | 15.0% |
| !!! | TAAGAAAAGTGTATAAATAA+AGG | - | chr7.2:363714-363733 | MS.gene024386:intron | 15.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | - | chr7.2:363739-363758 | MS.gene024386:intron | 20.0% |
| !! | AATAATCTGTTTCCATAATT+TGG | - | chr7.2:364898-364917 | MS.gene024386:CDS | 20.0% |
| !! | AATATATAAAGGGTAAAGTT+GGG | - | chr7.2:364200-364219 | MS.gene024386:intron | 20.0% |
| !! | ATATAATTGAATTTGTGTGT+TGG | - | chr7.2:363189-363208 | MS.gene024386:intron | 20.0% |
| !! | GTAAAGTATAAAAACTGAAA+TGG | + | chr7.2:363910-363929 | None:intergenic | 20.0% |
| !! | TAAAATAACAAGGGTAATAA+TGG | - | chr7.2:364230-364249 | MS.gene024386:intron | 20.0% |
| !! | TAATATATAAAGGGTAAAGT+TGG | - | chr7.2:364199-364218 | MS.gene024386:intron | 20.0% |
| !! | TATATTATATGCAAAAAGGA+AGG | + | chr7.2:364596-364615 | None:intergenic | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | - | chr7.2:363849-363868 | MS.gene024386:intron | 20.0% |
| !!! | GGGTTTTAATTAAAATAACA+AGG | - | chr7.2:364220-364239 | MS.gene024386:intron | 20.0% |
| ! | AATAATATATAATTGCAGGG+AGG | - | chr7.2:364937-364956 | MS.gene024386:CDS | 25.0% |
| ! | ATATATATATAGGCTCTGTT+TGG | - | chr7.2:363444-363463 | MS.gene024386:CDS | 25.0% |
| ! | ATTGTTACTACAAGAAAAAC+TGG | - | chr7.2:363994-364013 | MS.gene024386:intron | 25.0% |
| ! | CAATCTATTGAACCAAATTA+TGG | + | chr7.2:364913-364932 | None:intergenic | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | - | chr7.2:363738-363757 | MS.gene024386:intron | 25.0% |
| ! | TGTATAAATAAAGGAGAAAG+TGG | - | chr7.2:363723-363742 | MS.gene024386:intron | 25.0% |
| ! | TTGACAAAAAAAACTCTGTT+TGG | + | chr7.2:364378-364397 | None:intergenic | 25.0% |
| !! | AAAGTGTTTGGTAAAAATAG+CGG | - | chr7.2:363589-363608 | MS.gene024386:intron | 25.0% |
| !! | GATAAGCTAATTAAAGTGTT+TGG | - | chr7.2:363577-363596 | MS.gene024386:intron | 25.0% |
| !! | TGTATAGTCTTTAGAAATTC+TGG | + | chr7.2:363347-363366 | None:intergenic | 25.0% |
| !! | TTATAAGCTATAAGCTCTTT+TGG | - | chr7.2:364404-364423 | MS.gene024386:intron | 25.0% |
| !! | TTGAAATGAGTCAGTTATTT+TGG | - | chr7.2:363826-363845 | MS.gene024386:intron | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | - | chr7.2:363848-363867 | MS.gene024386:intron | 25.0% |
| !!! | TGAAATGAGTCAGTTATTTT+GGG | - | chr7.2:363827-363846 | MS.gene024386:intron | 25.0% |
| AACTCAACACACATATACTA+TGG | + | chr7.2:364448-364467 | None:intergenic | 30.0% | |
| ACTCAACACACATATACTAT+GGG | + | chr7.2:364447-364466 | None:intergenic | 30.0% | |
| ATAGTATATGTGTGTTGAGT+TGG | - | chr7.2:364447-364466 | MS.gene024386:intron | 30.0% | |
| GACGTAATATACATAAGAAC+TGG | - | chr7.2:364122-364141 | MS.gene024386:intron | 30.0% | |
| GATTGGATGTAATGTATAGT+GGG | - | chr7.2:364479-364498 | MS.gene024386:intron | 30.0% | |
| GCTTTGATACGCAAAATAAA+AGG | - | chr7.2:364959-364978 | MS.gene024386:CDS | 30.0% | |
| TCTTCATTCACTCTTATTGA+TGG | - | chr7.2:363012-363031 | MS.gene024386:CDS | 30.0% | |
| ! | TGTATTTGACTTACAGAAAG+CGG | + | chr7.2:363136-363155 | None:intergenic | 30.0% |
| AAGAGTGAATGAAGAGAAAG+TGG | + | chr7.2:363007-363026 | None:intergenic | 35.0% | |
| ACATATACTATGGGTCTGTT+TGG | + | chr7.2:364438-364457 | None:intergenic | 35.0% | |
| ACGCAGGGAAAAAAATATAG+AGG | - | chr7.2:364147-364166 | MS.gene024386:intron | 35.0% | |
| AGAAAATGGGTCAGTTATTC+CGG | - | chr7.2:363862-363881 | MS.gene024386:intron | 35.0% | |
| ATAGGCTTCCTTTAATTCCT+GGG | - | chr7.2:364684-364703 | MS.gene024386:CDS | 35.0% | |
| ATCTGCAGAAGATACAAAGT+AGG | + | chr7.2:364750-364769 | None:intergenic | 35.0% | |
| CAAAGTAGGTCAATTAAACC+GGG | + | chr7.2:363679-363698 | None:intergenic | 35.0% | |
| CCAAAGTAGGTCAATTAAAC+CGG | + | chr7.2:363680-363699 | None:intergenic | 35.0% | |
| GCTCTGTTTGGTAAAAATAG+CGG | - | chr7.2:363456-363475 | MS.gene024386:CDS | 35.0% | |
| GGATTGGATGTAATGTATAG+TGG | - | chr7.2:364478-364497 | MS.gene024386:intron | 35.0% | |
| TCTGTGTGAAAAACCAAAGT+AGG | + | chr7.2:363693-363712 | None:intergenic | 35.0% | |
| TGATGAAACAGGCTATTGAT+AGG | - | chr7.2:364666-364685 | MS.gene024386:CDS | 35.0% | |
| ! | TAAGCTATAAGCTCTTTTGG+TGG | - | chr7.2:364407-364426 | MS.gene024386:intron | 35.0% |
| !! | ATATGTGTGTTGAGTTGGAT+TGG | - | chr7.2:364452-364471 | MS.gene024386:intron | 35.0% |
| AAGTACCACAACAGAAACAG+AGG | - | chr7.2:363262-363281 | MS.gene024386:CDS | 40.0% | |
| ACATAAGAACTGGAAACGCA+GGG | - | chr7.2:364132-364151 | MS.gene024386:intron | 40.0% | |
| AGAATCAGTGACAGTAGTAC+TGG | + | chr7.2:363324-363343 | None:intergenic | 40.0% | |
| CCGGTTTAATTGACCTACTT+TGG | - | chr7.2:363677-363696 | MS.gene024386:intron | 40.0% | |
| CTATAAGCTCAAACGCTACT+TGG | - | chr7.2:364276-364295 | MS.gene024386:intron | 40.0% | |
| GAAAATGGGTCAGTTATTCC+GGG | - | chr7.2:363863-363882 | MS.gene024386:intron | 40.0% | |
| GATAGGCTTCCTTTAATTCC+TGG | - | chr7.2:364683-364702 | MS.gene024386:CDS | 40.0% | |
| GCACTGTTAAAGACATCACT+GGG | - | chr7.2:364981-365000 | MS.gene024386:CDS | 40.0% | |
| TACATAAGAACTGGAAACGC+AGG | - | chr7.2:364131-364150 | MS.gene024386:intron | 40.0% | |
| TACTATGGGTCTGTTTGGTA+AGG | + | chr7.2:364433-364452 | None:intergenic | 40.0% | |
| TAGGCTTCCTTTAATTCCTG+GGG | - | chr7.2:364685-364704 | MS.gene024386:CDS | 40.0% | |
| TCAAGAACCCCAGGAATTAA+AGG | + | chr7.2:364695-364714 | None:intergenic | 40.0% | |
| TCGTATCTTCTTCTTTGCAG+TGG | - | chr7.2:364821-364840 | MS.gene024386:intron | 40.0% | |
| TGAAGAGAAAGTGGAAGATG+AGG | + | chr7.2:362998-363017 | None:intergenic | 40.0% | |
| ! | ATTTGACTTACAGAAAGCGG+TGG | + | chr7.2:363133-363152 | None:intergenic | 40.0% |
| ! | TGAGTTGGATTGGATTGGAT+TGG | - | chr7.2:364462-364481 | MS.gene024386:intron | 40.0% |
| !! | ACCTAGTTTTCAAGCCAGAT+CGG | - | chr7.2:364857-364876 | MS.gene024386:CDS | 40.0% |
| !! | TGTGTTGAGTTGGATTGGAT+TGG | - | chr7.2:364457-364476 | MS.gene024386:intron | 40.0% |
| AGCAGGTACGGTTGCATTAT+GGG | - | chr7.2:364542-364561 | MS.gene024386:intron | 45.0% | |
| GCATCTGCATCTGATGAAAC+AGG | - | chr7.2:364655-364674 | MS.gene024386:CDS | 45.0% | |
| GGCACTGTTAAAGACATCAC+TGG | - | chr7.2:364980-364999 | MS.gene024386:CDS | 45.0% | |
| GTAGGTCAATTAAACCGGGA+CGG | + | chr7.2:363675-363694 | None:intergenic | 45.0% | |
| GTTCTTGAACTCGTAGGCAT+TGG | - | chr7.2:364707-364726 | MS.gene024386:CDS | 45.0% | |
| TAGCAGGTACGGTTGCATTA+TGG | - | chr7.2:364541-364560 | MS.gene024386:intron | 45.0% | |
| TGCTCGCAATGTTATGTCCA+TGG | - | chr7.2:363235-363254 | MS.gene024386:intron | 45.0% | |
| TGTTGTGGTACTTGAAGCCA+TGG | + | chr7.2:363255-363274 | None:intergenic | 45.0% | |
| ! | AAGAGCATAGCATACCGATC+TGG | + | chr7.2:364874-364893 | None:intergenic | 45.0% |
| ! | ACCGATCTGGCTTGAAAACT+AGG | + | chr7.2:364861-364880 | None:intergenic | 45.0% |
| ! | GTTGGTTGATTCACTCAGGT+CGG | - | chr7.2:363207-363226 | MS.gene024386:intron | 45.0% |
| !! | AGTAGTACTGGTGTCAGTTG+AGG | + | chr7.2:363312-363331 | None:intergenic | 45.0% |
| !! | ATCTGCCTCTGTTTCTGTTG+TGG | + | chr7.2:363270-363289 | None:intergenic | 45.0% |
| !! | GTGTGTTGGTTGATTCACTC+AGG | - | chr7.2:363203-363222 | MS.gene024386:intron | 45.0% |
| AAATGTTACTCCCTCCGTCC+CGG | + | chr7.2:363884-363903 | None:intergenic | 50.0% | |
| AGTTGAGGCAACCTCTGTTG+TGG | + | chr7.2:363297-363316 | None:intergenic | 50.0% | |
| ATGGGTCAGTTATTCCGGGA+CGG | - | chr7.2:363867-363886 | MS.gene024386:intron | 50.0% | |
| GAAAGTGGAAGATGAGGCTG+AGG | + | chr7.2:362992-363011 | None:intergenic | 50.0% | |
| GCAGGTACGGTTGCATTATG+GGG | - | chr7.2:364543-364562 | MS.gene024386:intron | 50.0% | |
| GTCAATTAAACCGGGACGGA+GGG | + | chr7.2:363671-363690 | None:intergenic | 50.0% | |
| GTTGGAAGGCTCACACATTG+TGG | + | chr7.2:363066-363085 | None:intergenic | 50.0% | |
| TATGGGACTGAACAGGTGGA+GGG | + | chr7.2:363095-363114 | None:intergenic | 50.0% | |
| TGCTCTAGCTGTAGCAGGTA+CGG | - | chr7.2:364530-364549 | MS.gene024386:intron | 50.0% | |
| TTCATATACTCCCTCCGTCC+CGG | - | chr7.2:363658-363677 | MS.gene024386:intron | 50.0% | |
| TTGCATTATGGGGCTCAGCT+GGG | - | chr7.2:364553-364572 | MS.gene024386:intron | 50.0% | |
| ACAGAAAGCGGTGGTCTTCC+AGG | + | chr7.2:363124-363143 | None:intergenic | 55.0% | |
| AGTGGAAGATGAGGCTGAGG+AGG | + | chr7.2:362989-363008 | None:intergenic | 55.0% | |
| ATGGGACTGAACAGGTGGAG+GGG | + | chr7.2:363094-363113 | None:intergenic | 55.0% | |
| CAGAAAGCGGTGGTCTTCCA+GGG | + | chr7.2:363123-363142 | None:intergenic | 55.0% | |
| CCTACGAGTTCAAGAACCCC+AGG | + | chr7.2:364704-364723 | None:intergenic | 55.0% | |
| CCTGGGGTTCTTGAACTCGT+AGG | - | chr7.2:364701-364720 | MS.gene024386:CDS | 55.0% | |
| CGAGTATGGGACTGAACAGG+TGG | + | chr7.2:363099-363118 | None:intergenic | 55.0% | |
| GGACGAGTATGGGACTGAAC+AGG | + | chr7.2:363102-363121 | None:intergenic | 55.0% | |
| GGTCAATTAAACCGGGACGG+AGG | + | chr7.2:363672-363691 | None:intergenic | 55.0% | |
| GGTCTTCCAGGGACGAGTAT+GGG | + | chr7.2:363112-363131 | None:intergenic | 55.0% | |
| GTATGGGACTGAACAGGTGG+AGG | + | chr7.2:363096-363115 | None:intergenic | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | - | chr7.2:363871-363890 | MS.gene024386:intron | 55.0% | |
| GTGAGTGCTCTAGCTGTAGC+AGG | - | chr7.2:364525-364544 | MS.gene024386:intron | 55.0% | |
| GTTGCATTATGGGGCTCAGC+TGG | - | chr7.2:364552-364571 | MS.gene024386:intron | 55.0% | |
| TGCATTATGGGGCTCAGCTG+GGG | - | chr7.2:364554-364573 | MS.gene024386:intron | 55.0% | |
| TGGTCTTCCAGGGACGAGTA+TGG | + | chr7.2:363113-363132 | None:intergenic | 55.0% | |
| TTCAGTCCCATACTCGTCCC+TGG | - | chr7.2:363103-363122 | MS.gene024386:intron | 55.0% | |
| ! | GGAGAAGCAGAGTGTCTGCA+GGG | + | chr7.2:363045-363064 | None:intergenic | 55.0% |
| ! | TGGAGAAGCAGAGTGTCTGC+AGG | + | chr7.2:363046-363065 | None:intergenic | 55.0% |
| !! | CTCGTAGGCATTGGCTACAC+TGG | - | chr7.2:364716-364735 | MS.gene024386:CDS | 55.0% |
| ACAGGTGGAGGGGGAAGAGT+TGG | + | chr7.2:363084-363103 | None:intergenic | 60.0% | |
| GGCAGATGCAGCCACAACAG+AGG | - | chr7.2:363283-363302 | MS.gene024386:CDS | 60.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | - | chr7.2:363870-363889 | MS.gene024386:intron | 60.0% | |
| GTGGAGGGGGAAGAGTTGGA+AGG | + | chr7.2:363080-363099 | None:intergenic | 60.0% | |
| TGGGACTGAACAGGTGGAGG+GGG | + | chr7.2:363093-363112 | None:intergenic | 60.0% | |
| ! | GAAGCAGAGTGTCTGCAGGG+AGG | + | chr7.2:363042-363061 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 362982 | 365015 | 362982 | ID=MS.gene024386 |
| chr7.2 | mRNA | 362982 | 365015 | 362982 | ID=MS.gene024386.t1;Parent=MS.gene024386 |
| chr7.2 | exon | 364856 | 365015 | 364856 | ID=MS.gene024386.t1.exon1;Parent=MS.gene024386.t1 |
| chr7.2 | CDS | 364856 | 365015 | 364856 | ID=cds.MS.gene024386.t1;Parent=MS.gene024386.t1 |
| chr7.2 | exon | 364624 | 364772 | 364624 | ID=MS.gene024386.t1.exon2;Parent=MS.gene024386.t1 |
| chr7.2 | CDS | 364624 | 364772 | 364624 | ID=cds.MS.gene024386.t1;Parent=MS.gene024386.t1 |
| chr7.2 | exon | 363413 | 363499 | 363413 | ID=MS.gene024386.t1.exon3;Parent=MS.gene024386.t1 |
| chr7.2 | CDS | 363413 | 363499 | 363413 | ID=cds.MS.gene024386.t1;Parent=MS.gene024386.t1 |
| chr7.2 | exon | 363258 | 363320 | 363258 | ID=MS.gene024386.t1.exon4;Parent=MS.gene024386.t1 |
| chr7.2 | CDS | 363258 | 363320 | 363258 | ID=cds.MS.gene024386.t1;Parent=MS.gene024386.t1 |
| chr7.2 | exon | 363119 | 363156 | 363119 | ID=MS.gene024386.t1.exon5;Parent=MS.gene024386.t1 |
| chr7.2 | CDS | 363119 | 363156 | 363119 | ID=cds.MS.gene024386.t1;Parent=MS.gene024386.t1 |
| chr7.2 | exon | 362982 | 363042 | 362982 | ID=MS.gene024386.t1.exon6;Parent=MS.gene024386.t1 |
| chr7.2 | CDS | 362982 | 363042 | 362982 | ID=cds.MS.gene024386.t1;Parent=MS.gene024386.t1 |
| Gene Sequence |
| Protein sequence |
