Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48506.t1 | XP_003603038.1 | 98.5 | 267 | 4 | 0 | 1 | 267 | 1 | 267 | 1.10E-148 | 535.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48506.t1 | Q9C639 | 77.4 | 230 | 45 | 2 | 39 | 267 | 33 | 256 | 2.6e-101 | 369.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48506.t1 | G7J6D2 | 98.5 | 267 | 4 | 0 | 1 | 267 | 1 | 267 | 8.2e-149 | 535.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene48506 | 0.812815 | 3.51E-51 | -1.69E-46 |
| MS.gene049171 | MS.gene48506 | 0.924199 | 9.69E-90 | -1.69E-46 |
| MS.gene049173 | MS.gene48506 | 0.890273 | 1.14E-73 | -1.69E-46 |
| MS.gene049217 | MS.gene48506 | 0.908979 | 9.45E-82 | -1.69E-46 |
| MS.gene049222 | MS.gene48506 | 0.924632 | 5.44E-90 | -1.69E-46 |
| MS.gene049232 | MS.gene48506 | 0.891751 | 2.98E-74 | -1.69E-46 |
| MS.gene049281 | MS.gene48506 | -0.813985 | 1.94E-51 | -1.69E-46 |
| MS.gene049285 | MS.gene48506 | 0.96981 | 1.13E-130 | -1.69E-46 |
| MS.gene049320 | MS.gene48506 | 0.962752 | 2.98E-121 | -1.69E-46 |
| MS.gene04939 | MS.gene48506 | 0.8598 | 3.22E-63 | -1.69E-46 |
| MS.gene049427 | MS.gene48506 | 0.809415 | 1.91E-50 | -1.69E-46 |
| MS.gene049609 | MS.gene48506 | 0.890878 | 6.61E-74 | -1.69E-46 |
| MS.gene049611 | MS.gene48506 | -0.810296 | 1.24E-50 | -1.69E-46 |
| MS.gene049615 | MS.gene48506 | 0.817794 | 2.74E-52 | -1.69E-46 |
| MS.gene049627 | MS.gene48506 | 0.852666 | 3.98E-61 | -1.69E-46 |
| MS.gene049633 | MS.gene48506 | 0.882258 | 1.21E-70 | -1.69E-46 |
| MS.gene049805 | MS.gene48506 | 0.874374 | 7.10E-68 | -1.69E-46 |
| MS.gene05010 | MS.gene48506 | 0.915539 | 5.22E-85 | -1.69E-46 |
| MS.gene050163 | MS.gene48506 | 0.953364 | 3.23E-111 | -1.69E-46 |
| MS.gene050165 | MS.gene48506 | 0.95158 | 1.51E-109 | -1.69E-46 |
| MS.gene050170 | MS.gene48506 | 0.845996 | 2.86E-59 | -1.69E-46 |
| MS.gene050216 | MS.gene48506 | 0.849951 | 2.33E-60 | -1.69E-46 |
| MS.gene050323 | MS.gene48506 | 0.881948 | 1.57E-70 | -1.69E-46 |
| MS.gene050333 | MS.gene48506 | 0.939595 | 9.76E-100 | -1.69E-46 |
| MS.gene050353 | MS.gene48506 | -0.801265 | 9.77E-49 | -1.69E-46 |
| MS.gene050381 | MS.gene48506 | -0.828068 | 1.10E-54 | -1.69E-46 |
| MS.gene050444 | MS.gene48506 | 0.871212 | 8.12E-67 | -1.69E-46 |
| MS.gene050496 | MS.gene48506 | 0.876474 | 1.36E-68 | -1.69E-46 |
| MS.gene050504 | MS.gene48506 | 0.948395 | 1.03E-106 | -1.69E-46 |
| MS.gene050518 | MS.gene48506 | 0.943302 | 1.54E-102 | -1.69E-46 |
| MS.gene050538 | MS.gene48506 | 0.829945 | 3.87E-55 | -1.69E-46 |
| MS.gene050577 | MS.gene48506 | 0.899753 | 1.45E-77 | -1.69E-46 |
| MS.gene050593 | MS.gene48506 | 0.845643 | 3.57E-59 | -1.69E-46 |
| MS.gene050612 | MS.gene48506 | 0.951852 | 8.50E-110 | -1.69E-46 |
| MS.gene050662 | MS.gene48506 | 0.846469 | 2.13E-59 | -1.69E-46 |
| MS.gene050675 | MS.gene48506 | 0.929292 | 8.57E-93 | -1.69E-46 |
| MS.gene050686 | MS.gene48506 | 0.83009 | 3.57E-55 | -1.69E-46 |
| MS.gene050690 | MS.gene48506 | 0.805009 | 1.64E-49 | -1.69E-46 |
| MS.gene050699 | MS.gene48506 | 0.937958 | 1.48E-98 | -1.69E-46 |
| MS.gene050747 | MS.gene48506 | 0.871078 | 8.99E-67 | -1.69E-46 |
| MS.gene050767 | MS.gene48506 | 0.834316 | 3.22E-56 | -1.69E-46 |
| MS.gene050770 | MS.gene48506 | 0.835961 | 1.24E-56 | -1.69E-46 |
| MS.gene050772 | MS.gene48506 | 0.928164 | 4.25E-92 | -1.69E-46 |
| MS.gene05079 | MS.gene48506 | -0.815841 | 7.52E-52 | -1.69E-46 |
| MS.gene05080 | MS.gene48506 | 0.880548 | 5.01E-70 | -1.69E-46 |
| MS.gene050832 | MS.gene48506 | -0.80277 | 4.79E-49 | -1.69E-46 |
| MS.gene050833 | MS.gene48506 | -0.817914 | 2.58E-52 | -1.69E-46 |
| MS.gene050868 | MS.gene48506 | 0.880369 | 5.81E-70 | -1.69E-46 |
| MS.gene050871 | MS.gene48506 | 0.878066 | 3.79E-69 | -1.69E-46 |
| MS.gene050876 | MS.gene48506 | 0.877699 | 5.09E-69 | -1.69E-46 |
| MS.gene05087 | MS.gene48506 | 0.806485 | 8.04E-50 | -1.69E-46 |
| MS.gene050883 | MS.gene48506 | -0.805264 | 1.45E-49 | -1.69E-46 |
| MS.gene050904 | MS.gene48506 | 0.842338 | 2.75E-58 | -1.69E-46 |
| MS.gene050950 | MS.gene48506 | 0.865 | 8.11E-65 | -1.69E-46 |
| MS.gene050986 | MS.gene48506 | 0.940549 | 1.93E-100 | -1.69E-46 |
| MS.gene05100 | MS.gene48506 | 0.921477 | 3.40E-88 | -1.69E-46 |
| MS.gene05104 | MS.gene48506 | -0.814354 | 1.61E-51 | -1.69E-46 |
| MS.gene051127 | MS.gene48506 | -0.826378 | 2.80E-54 | -1.69E-46 |
| MS.gene051138 | MS.gene48506 | -0.812664 | 3.78E-51 | -1.69E-46 |
| MS.gene051228 | MS.gene48506 | 0.881859 | 1.69E-70 | -1.69E-46 |
| MS.gene051268 | MS.gene48506 | 0.838128 | 3.46E-57 | -1.69E-46 |
| MS.gene051317 | MS.gene48506 | 0.874477 | 6.55E-68 | -1.69E-46 |
| MS.gene051364 | MS.gene48506 | -0.823848 | 1.11E-53 | -1.69E-46 |
| MS.gene051366 | MS.gene48506 | -0.824669 | 7.12E-54 | -1.69E-46 |
| MS.gene051509 | MS.gene48506 | 0.800574 | 1.35E-48 | -1.69E-46 |
| MS.gene051551 | MS.gene48506 | 0.910628 | 1.51E-82 | -1.69E-46 |
| MS.gene051564 | MS.gene48506 | 0.80468 | 1.92E-49 | -1.69E-46 |
| MS.gene051617 | MS.gene48506 | 0.813154 | 2.95E-51 | -1.69E-46 |
| MS.gene051651 | MS.gene48506 | -0.814944 | 1.19E-51 | -1.69E-46 |
| MS.gene051666 | MS.gene48506 | 0.851073 | 1.13E-60 | -1.69E-46 |
| MS.gene051694 | MS.gene48506 | 0.854246 | 1.40E-61 | -1.69E-46 |
| MS.gene051810 | MS.gene48506 | 0.933345 | 2.16E-95 | -1.69E-46 |
| MS.gene051838 | MS.gene48506 | 0.803362 | 3.62E-49 | -1.69E-46 |
| MS.gene051858 | MS.gene48506 | 0.861435 | 1.03E-63 | -1.69E-46 |
| MS.gene051874 | MS.gene48506 | 0.827299 | 1.69E-54 | -1.69E-46 |
| MS.gene051949 | MS.gene48506 | 0.903697 | 2.65E-79 | -1.69E-46 |
| MS.gene052129 | MS.gene48506 | -0.825555 | 4.40E-54 | -1.69E-46 |
| MS.gene052164 | MS.gene48506 | 0.883484 | 4.32E-71 | -1.69E-46 |
| MS.gene052271 | MS.gene48506 | 0.903152 | 4.66E-79 | -1.69E-46 |
| MS.gene052379 | MS.gene48506 | 0.879038 | 1.73E-69 | -1.69E-46 |
| MS.gene052421 | MS.gene48506 | 0.803678 | 3.11E-49 | -1.69E-46 |
| MS.gene052482 | MS.gene48506 | 0.872751 | 2.50E-67 | -1.69E-46 |
| MS.gene052486 | MS.gene48506 | 0.873516 | 1.38E-67 | -1.69E-46 |
| MS.gene052503 | MS.gene48506 | 0.865689 | 4.92E-65 | -1.69E-46 |
| MS.gene052504 | MS.gene48506 | 0.814987 | 1.16E-51 | -1.69E-46 |
| MS.gene052506 | MS.gene48506 | 0.851227 | 1.02E-60 | -1.69E-46 |
| MS.gene052605 | MS.gene48506 | 0.805881 | 1.08E-49 | -1.69E-46 |
| MS.gene052615 | MS.gene48506 | 0.881105 | 3.16E-70 | -1.69E-46 |
| MS.gene052670 | MS.gene48506 | 0.815689 | 8.13E-52 | -1.69E-46 |
| MS.gene052822 | MS.gene48506 | 0.869595 | 2.75E-66 | -1.69E-46 |
| MS.gene052823 | MS.gene48506 | 0.857382 | 1.70E-62 | -1.69E-46 |
| MS.gene052825 | MS.gene48506 | 0.851246 | 1.01E-60 | -1.69E-46 |
| MS.gene052870 | MS.gene48506 | 0.839674 | 1.38E-57 | -1.69E-46 |
| MS.gene052872 | MS.gene48506 | 0.855452 | 6.25E-62 | -1.69E-46 |
| MS.gene052916 | MS.gene48506 | 0.907302 | 5.87E-81 | -1.69E-46 |
| MS.gene052966 | MS.gene48506 | 0.871107 | 8.79E-67 | -1.69E-46 |
| MS.gene053009 | MS.gene48506 | 0.845559 | 3.77E-59 | -1.69E-46 |
| MS.gene053104 | MS.gene48506 | 0.857241 | 1.87E-62 | -1.69E-46 |
| MS.gene053203 | MS.gene48506 | 0.880286 | 6.22E-70 | -1.69E-46 |
| MS.gene053207 | MS.gene48506 | 0.875509 | 2.91E-68 | -1.69E-46 |
| MS.gene053213 | MS.gene48506 | 0.938975 | 2.76E-99 | -1.69E-46 |
| MS.gene053284 | MS.gene48506 | 0.814881 | 1.23E-51 | -1.69E-46 |
| MS.gene053285 | MS.gene48506 | 0.805422 | 1.35E-49 | -1.69E-46 |
| MS.gene053286 | MS.gene48506 | 0.939774 | 7.21E-100 | -1.69E-46 |
| MS.gene053322 | MS.gene48506 | 0.869605 | 2.73E-66 | -1.69E-46 |
| MS.gene053420 | MS.gene48506 | -0.835587 | 1.54E-56 | -1.69E-46 |
| MS.gene053436 | MS.gene48506 | 0.855292 | 6.96E-62 | -1.69E-46 |
| MS.gene053479 | MS.gene48506 | 0.834483 | 2.92E-56 | -1.69E-46 |
| MS.gene053480 | MS.gene48506 | 0.831951 | 1.25E-55 | -1.69E-46 |
| MS.gene053561 | MS.gene48506 | -0.839089 | 1.95E-57 | -1.69E-46 |
| MS.gene053574 | MS.gene48506 | 0.89625 | 4.42E-76 | -1.69E-46 |
| MS.gene053626 | MS.gene48506 | 0.842108 | 3.16E-58 | -1.69E-46 |
| MS.gene053632 | MS.gene48506 | 0.914878 | 1.14E-84 | -1.69E-46 |
| MS.gene053633 | MS.gene48506 | 0.816879 | 4.40E-52 | -1.69E-46 |
| MS.gene053824 | MS.gene48506 | 0.870608 | 1.28E-66 | -1.69E-46 |
| MS.gene053916 | MS.gene48506 | 0.890286 | 1.13E-73 | -1.69E-46 |
| MS.gene054003 | MS.gene48506 | 0.831511 | 1.60E-55 | -1.69E-46 |
| MS.gene054056 | MS.gene48506 | -0.807921 | 3.99E-50 | -1.69E-46 |
| MS.gene054374 | MS.gene48506 | 0.818169 | 2.26E-52 | -1.69E-46 |
| MS.gene054376 | MS.gene48506 | 0.804719 | 1.89E-49 | -1.69E-46 |
| MS.gene054408 | MS.gene48506 | 0.846426 | 2.19E-59 | -1.69E-46 |
| MS.gene054595 | MS.gene48506 | 0.880554 | 4.99E-70 | -1.69E-46 |
| MS.gene054600 | MS.gene48506 | 0.912733 | 1.39E-83 | -1.69E-46 |
| MS.gene054616 | MS.gene48506 | -0.823347 | 1.45E-53 | -1.69E-46 |
| MS.gene054642 | MS.gene48506 | 0.971884 | 7.17E-134 | -1.69E-46 |
| MS.gene054706 | MS.gene48506 | -0.835113 | 2.03E-56 | -1.69E-46 |
| MS.gene054708 | MS.gene48506 | -0.805538 | 1.27E-49 | -1.69E-46 |
| MS.gene05470 | MS.gene48506 | 0.882446 | 1.04E-70 | -1.69E-46 |
| MS.gene054927 | MS.gene48506 | 0.815157 | 1.07E-51 | -1.69E-46 |
| MS.gene054954 | MS.gene48506 | 0.963176 | 9.13E-122 | -1.69E-46 |
| MS.gene054959 | MS.gene48506 | -0.821779 | 3.37E-53 | -1.69E-46 |
| MS.gene05505 | MS.gene48506 | 0.857113 | 2.04E-62 | -1.69E-46 |
| MS.gene055154 | MS.gene48506 | -0.85273 | 3.81E-61 | -1.69E-46 |
| MS.gene055206 | MS.gene48506 | 0.861866 | 7.59E-64 | -1.69E-46 |
| MS.gene055212 | MS.gene48506 | 0.878366 | 2.98E-69 | -1.69E-46 |
| MS.gene055224 | MS.gene48506 | 0.833631 | 4.77E-56 | -1.69E-46 |
| MS.gene055289 | MS.gene48506 | 0.82911 | 6.18E-55 | -1.69E-46 |
| MS.gene055362 | MS.gene48506 | 0.956178 | 5.43E-114 | -1.69E-46 |
| MS.gene055397 | MS.gene48506 | 0.860085 | 2.64E-63 | -1.69E-46 |
| MS.gene055499 | MS.gene48506 | 0.864701 | 1.01E-64 | -1.69E-46 |
| MS.gene055502 | MS.gene48506 | 0.93968 | 8.46E-100 | -1.69E-46 |
| MS.gene055577 | MS.gene48506 | 0.914966 | 1.03E-84 | -1.69E-46 |
| MS.gene055634 | MS.gene48506 | 0.863227 | 2.89E-64 | -1.69E-46 |
| MS.gene055636 | MS.gene48506 | 0.86153 | 9.61E-64 | -1.69E-46 |
| MS.gene055638 | MS.gene48506 | 0.883285 | 5.11E-71 | -1.69E-46 |
| MS.gene055647 | MS.gene48506 | 0.864255 | 1.39E-64 | -1.69E-46 |
| MS.gene055722 | MS.gene48506 | 0.894727 | 1.88E-75 | -1.69E-46 |
| MS.gene055748 | MS.gene48506 | 0.895891 | 6.22E-76 | -1.69E-46 |
| MS.gene055750 | MS.gene48506 | 0.891228 | 4.81E-74 | -1.69E-46 |
| MS.gene055751 | MS.gene48506 | 0.904184 | 1.60E-79 | -1.69E-46 |
| MS.gene055776 | MS.gene48506 | 0.913196 | 8.14E-84 | -1.69E-46 |
| MS.gene055849 | MS.gene48506 | 0.854657 | 1.06E-61 | -1.69E-46 |
| MS.gene05589 | MS.gene48506 | 0.86947 | 3.02E-66 | -1.69E-46 |
| MS.gene05592 | MS.gene48506 | 0.879432 | 1.25E-69 | -1.69E-46 |
| MS.gene055941 | MS.gene48506 | 0.889621 | 2.06E-73 | -1.69E-46 |
| MS.gene055942 | MS.gene48506 | -0.835211 | 1.92E-56 | -1.69E-46 |
| MS.gene055956 | MS.gene48506 | -0.864406 | 1.24E-64 | -1.69E-46 |
| MS.gene056046 | MS.gene48506 | 0.849747 | 2.65E-60 | -1.69E-46 |
| MS.gene056083 | MS.gene48506 | 0.877934 | 4.22E-69 | -1.69E-46 |
| MS.gene056359 | MS.gene48506 | -0.816146 | 6.43E-52 | -1.69E-46 |
| MS.gene056374 | MS.gene48506 | 0.91703 | 8.71E-86 | -1.69E-46 |
| MS.gene056409 | MS.gene48506 | 0.831912 | 1.28E-55 | -1.69E-46 |
| MS.gene056446 | MS.gene48506 | 0.817551 | 3.11E-52 | -1.69E-46 |
| MS.gene056449 | MS.gene48506 | 0.829513 | 4.94E-55 | -1.69E-46 |
| MS.gene056450 | MS.gene48506 | 0.801246 | 9.86E-49 | -1.69E-46 |
| MS.gene056487 | MS.gene48506 | 0.835268 | 1.85E-56 | -1.69E-46 |
| MS.gene056504 | MS.gene48506 | 0.920207 | 1.71E-87 | -1.69E-46 |
| MS.gene056510 | MS.gene48506 | 0.928997 | 1.31E-92 | -1.69E-46 |
| MS.gene056549 | MS.gene48506 | 0.848564 | 5.66E-60 | -1.69E-46 |
| MS.gene056550 | MS.gene48506 | -0.832243 | 1.06E-55 | -1.69E-46 |
| MS.gene056610 | MS.gene48506 | 0.84056 | 8.08E-58 | -1.69E-46 |
| MS.gene056657 | MS.gene48506 | 0.965159 | 3.03E-124 | -1.69E-46 |
| MS.gene056692 | MS.gene48506 | 0.899511 | 1.84E-77 | -1.69E-46 |
| MS.gene056761 | MS.gene48506 | -0.817532 | 3.14E-52 | -1.69E-46 |
| MS.gene056856 | MS.gene48506 | -0.811458 | 6.93E-51 | -1.69E-46 |
| MS.gene056897 | MS.gene48506 | 0.802096 | 6.60E-49 | -1.69E-46 |
| MS.gene056898 | MS.gene48506 | 0.858474 | 8.04E-63 | -1.69E-46 |
| MS.gene056946 | MS.gene48506 | 0.812253 | 4.65E-51 | -1.69E-46 |
| MS.gene057011 | MS.gene48506 | 0.801301 | 9.61E-49 | -1.69E-46 |
| MS.gene057014 | MS.gene48506 | -0.813065 | 3.09E-51 | -1.69E-46 |
| MS.gene057076 | MS.gene48506 | 0.869883 | 2.22E-66 | -1.69E-46 |
| MS.gene057086 | MS.gene48506 | 0.808063 | 3.72E-50 | -1.69E-46 |
| MS.gene057129 | MS.gene48506 | 0.890593 | 8.56E-74 | -1.69E-46 |
| MS.gene057146 | MS.gene48506 | 0.80276 | 4.81E-49 | -1.69E-46 |
| MS.gene057246 | MS.gene48506 | 0.834784 | 2.45E-56 | -1.69E-46 |
| MS.gene057331 | MS.gene48506 | 0.871415 | 6.95E-67 | -1.69E-46 |
| MS.gene057416 | MS.gene48506 | 0.910151 | 2.58E-82 | -1.69E-46 |
| MS.gene05753 | MS.gene48506 | 0.820864 | 5.47E-53 | -1.69E-46 |
| MS.gene057658 | MS.gene48506 | 0.845402 | 4.15E-59 | -1.69E-46 |
| MS.gene057734 | MS.gene48506 | 0.811627 | 6.37E-51 | -1.69E-46 |
| MS.gene057831 | MS.gene48506 | 0.883028 | 6.34E-71 | -1.69E-46 |
| MS.gene057856 | MS.gene48506 | 0.802669 | 5.03E-49 | -1.69E-46 |
| MS.gene057857 | MS.gene48506 | 0.82566 | 4.15E-54 | -1.69E-46 |
| MS.gene05787 | MS.gene48506 | 0.82261 | 2.16E-53 | -1.69E-46 |
| MS.gene057926 | MS.gene48506 | 0.86542 | 5.98E-65 | -1.69E-46 |
| MS.gene057986 | MS.gene48506 | 0.809785 | 1.59E-50 | -1.69E-46 |
| MS.gene058019 | MS.gene48506 | 0.860815 | 1.59E-63 | -1.69E-46 |
| MS.gene058130 | MS.gene48506 | 0.826792 | 2.23E-54 | -1.69E-46 |
| MS.gene058268 | MS.gene48506 | -0.820081 | 8.28E-53 | -1.69E-46 |
| MS.gene058269 | MS.gene48506 | -0.817857 | 2.65E-52 | -1.69E-46 |
| MS.gene058323 | MS.gene48506 | 0.835372 | 1.74E-56 | -1.69E-46 |
| MS.gene058334 | MS.gene48506 | -0.848754 | 5.01E-60 | -1.69E-46 |
| MS.gene058335 | MS.gene48506 | 0.818123 | 2.31E-52 | -1.69E-46 |
| MS.gene058338 | MS.gene48506 | 0.848135 | 7.43E-60 | -1.69E-46 |
| MS.gene05837 | MS.gene48506 | 0.858609 | 7.33E-63 | -1.69E-46 |
| MS.gene058419 | MS.gene48506 | 0.958023 | 6.54E-116 | -1.69E-46 |
| MS.gene058544 | MS.gene48506 | 0.906691 | 1.13E-80 | -1.69E-46 |
| MS.gene058719 | MS.gene48506 | 0.837129 | 6.24E-57 | -1.69E-46 |
| MS.gene058723 | MS.gene48506 | 0.900033 | 1.10E-77 | -1.69E-46 |
| MS.gene058773 | MS.gene48506 | 0.928348 | 3.28E-92 | -1.69E-46 |
| MS.gene058838 | MS.gene48506 | 0.870067 | 1.93E-66 | -1.69E-46 |
| MS.gene05883 | MS.gene48506 | 0.821956 | 3.06E-53 | -1.69E-46 |
| MS.gene058978 | MS.gene48506 | -0.805086 | 1.58E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene48506 | 0.953299 | 3.72E-111 | -1.69E-46 |
| MS.gene059023 | MS.gene48506 | 0.897948 | 8.56E-77 | -1.69E-46 |
| MS.gene059029 | MS.gene48506 | 0.891862 | 2.69E-74 | -1.69E-46 |
| MS.gene059079 | MS.gene48506 | 0.840907 | 6.55E-58 | -1.69E-46 |
| MS.gene05912 | MS.gene48506 | 0.834321 | 3.21E-56 | -1.69E-46 |
| MS.gene05913 | MS.gene48506 | 0.895467 | 9.32E-76 | -1.69E-46 |
| MS.gene05914 | MS.gene48506 | 0.818168 | 2.26E-52 | -1.69E-46 |
| MS.gene059305 | MS.gene48506 | 0.804259 | 2.35E-49 | -1.69E-46 |
| MS.gene05934 | MS.gene48506 | 0.861201 | 1.21E-63 | -1.69E-46 |
| MS.gene059367 | MS.gene48506 | 0.85035 | 1.80E-60 | -1.69E-46 |
| MS.gene059536 | MS.gene48506 | 0.842876 | 1.98E-58 | -1.69E-46 |
| MS.gene059667 | MS.gene48506 | 0.814158 | 1.78E-51 | -1.69E-46 |
| MS.gene059677 | MS.gene48506 | 0.962644 | 4.01E-121 | -1.69E-46 |
| MS.gene059699 | MS.gene48506 | -0.810598 | 1.06E-50 | -1.69E-46 |
| MS.gene059703 | MS.gene48506 | -0.816192 | 6.28E-52 | -1.69E-46 |
| MS.gene059718 | MS.gene48506 | 0.937541 | 2.93E-98 | -1.69E-46 |
| MS.gene059756 | MS.gene48506 | 0.882735 | 8.12E-71 | -1.69E-46 |
| MS.gene059801 | MS.gene48506 | 0.862748 | 4.07E-64 | -1.69E-46 |
| MS.gene059837 | MS.gene48506 | 0.819715 | 1.00E-52 | -1.69E-46 |
| MS.gene059865 | MS.gene48506 | 0.929936 | 3.39E-93 | -1.69E-46 |
| MS.gene059902 | MS.gene48506 | 0.860413 | 2.10E-63 | -1.69E-46 |
| MS.gene059960 | MS.gene48506 | 0.861069 | 1.33E-63 | -1.69E-46 |
| MS.gene06000 | MS.gene48506 | 0.828366 | 9.36E-55 | -1.69E-46 |
| MS.gene060193 | MS.gene48506 | 0.821544 | 3.82E-53 | -1.69E-46 |
| MS.gene060337 | MS.gene48506 | -0.862181 | 6.08E-64 | -1.69E-46 |
| MS.gene060341 | MS.gene48506 | 0.841334 | 5.06E-58 | -1.69E-46 |
| MS.gene060482 | MS.gene48506 | 0.86834 | 7.02E-66 | -1.69E-46 |
| MS.gene060526 | MS.gene48506 | 0.814701 | 1.35E-51 | -1.69E-46 |
| MS.gene060595 | MS.gene48506 | -0.813192 | 2.90E-51 | -1.69E-46 |
| MS.gene060703 | MS.gene48506 | 0.92868 | 2.05E-92 | -1.69E-46 |
| MS.gene060727 | MS.gene48506 | 0.805308 | 1.42E-49 | -1.69E-46 |
| MS.gene060728 | MS.gene48506 | 0.849049 | 4.15E-60 | -1.69E-46 |
| MS.gene060762 | MS.gene48506 | 0.919352 | 5.01E-87 | -1.69E-46 |
| MS.gene060778 | MS.gene48506 | 0.869185 | 3.74E-66 | -1.69E-46 |
| MS.gene06077 | MS.gene48506 | 0.914363 | 2.09E-84 | -1.69E-46 |
| MS.gene060804 | MS.gene48506 | 0.853759 | 1.93E-61 | -1.69E-46 |
| MS.gene060818 | MS.gene48506 | 0.829347 | 5.42E-55 | -1.69E-46 |
| MS.gene060823 | MS.gene48506 | -0.811412 | 7.09E-51 | -1.69E-46 |
| MS.gene060835 | MS.gene48506 | 0.845761 | 3.32E-59 | -1.69E-46 |
| MS.gene06092 | MS.gene48506 | 0.870049 | 1.96E-66 | -1.69E-46 |
| MS.gene060982 | MS.gene48506 | 0.905749 | 3.09E-80 | -1.69E-46 |
| MS.gene061041 | MS.gene48506 | 0.842513 | 2.47E-58 | -1.69E-46 |
| MS.gene06105 | MS.gene48506 | 0.804143 | 2.49E-49 | -1.69E-46 |
| MS.gene061134 | MS.gene48506 | 0.856219 | 3.73E-62 | -1.69E-46 |
| MS.gene061150 | MS.gene48506 | 0.916668 | 1.35E-85 | -1.69E-46 |
| MS.gene061171 | MS.gene48506 | 0.83528 | 1.84E-56 | -1.69E-46 |
| MS.gene061200 | MS.gene48506 | 0.882602 | 9.08E-71 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene48506 | MS.gene08487 | PPI |
| MS.gene48506 | MS.gene039151 | PPI |
| MS.gene48506 | MS.gene024386 | PPI |
| MS.gene48506 | MS.gene040618 | PPI |
| MS.gene48506 | MS.gene22752 | PPI |
| MS.gene48506 | MS.gene81067 | PPI |
| MS.gene48506 | MS.gene98588 | PPI |
| MS.gene48506 | MS.gene25011 | PPI |
| MS.gene48506 | MS.gene88194 | PPI |
| MS.gene48506 | MS.gene025854 | PPI |
| MS.gene48506 | MS.gene050986 | PPI |
| MS.gene48506 | MS.gene66718 | PPI |
| MS.gene48506 | MS.gene050699 | PPI |
| MS.gene48506 | MS.gene044778 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48506.t1 | MTR_3g101670 | 98.502 | 267 | 4 | 0 | 1 | 267 | 1 | 267 | 0.0 | 536 |
| MS.gene48506.t1 | MTR_3g435460 | 50.952 | 210 | 95 | 4 | 57 | 266 | 52 | 253 | 1.82e-66 | 207 |
| MS.gene48506.t1 | MTR_8g023790 | 50.237 | 211 | 100 | 4 | 51 | 259 | 55 | 262 | 2.55e-65 | 205 |
| MS.gene48506.t1 | MTR_5g098785 | 47.234 | 235 | 100 | 9 | 45 | 262 | 47 | 274 | 1.39e-60 | 193 |
| MS.gene48506.t1 | MTR_3g435460 | 50.777 | 193 | 87 | 4 | 74 | 266 | 8 | 192 | 7.41e-60 | 188 |
| MS.gene48506.t1 | MTR_5g098780 | 45.607 | 239 | 109 | 8 | 41 | 262 | 38 | 272 | 1.20e-59 | 191 |
| MS.gene48506.t1 | MTR_2g042720 | 48.325 | 209 | 104 | 3 | 57 | 264 | 61 | 266 | 2.10e-56 | 182 |
| MS.gene48506.t1 | MTR_6g033320 | 36.752 | 234 | 113 | 7 | 37 | 262 | 32 | 238 | 1.57e-40 | 140 |
| MS.gene48506.t1 | MTR_2g008610 | 44.221 | 199 | 84 | 6 | 58 | 235 | 57 | 249 | 2.15e-40 | 140 |
| MS.gene48506.t1 | MTR_1g026550 | 39.256 | 242 | 106 | 7 | 49 | 264 | 103 | 329 | 6.60e-40 | 141 |
| MS.gene48506.t1 | MTR_5g097280 | 41.667 | 192 | 98 | 4 | 68 | 253 | 66 | 249 | 8.25e-37 | 131 |
| MS.gene48506.t1 | MTR_4g094605 | 40.722 | 194 | 101 | 5 | 66 | 253 | 65 | 250 | 4.58e-36 | 129 |
| MS.gene48506.t1 | MTR_6g011880 | 39.409 | 203 | 91 | 6 | 66 | 253 | 64 | 249 | 1.44e-35 | 128 |
| MS.gene48506.t1 | MTR_6g011870 | 39.409 | 203 | 91 | 6 | 66 | 253 | 64 | 249 | 1.63e-35 | 128 |
| MS.gene48506.t1 | MTR_6g011890 | 39.409 | 203 | 91 | 6 | 66 | 253 | 64 | 249 | 2.80e-35 | 127 |
| MS.gene48506.t1 | MTR_6g012080 | 38.424 | 203 | 93 | 6 | 66 | 253 | 64 | 249 | 1.10e-34 | 125 |
| MS.gene48506.t1 | MTR_6g012110 | 38.424 | 203 | 93 | 6 | 66 | 253 | 64 | 249 | 1.93e-34 | 125 |
| MS.gene48506.t1 | MTR_4g015570 | 32.955 | 264 | 99 | 5 | 55 | 265 | 51 | 289 | 2.46e-34 | 125 |
| MS.gene48506.t1 | MTR_6g060175 | 37.383 | 214 | 96 | 7 | 68 | 265 | 91 | 282 | 2.51e-34 | 125 |
| MS.gene48506.t1 | MTR_2g081090 | 38.119 | 202 | 93 | 6 | 68 | 253 | 36 | 221 | 1.28e-31 | 117 |
| MS.gene48506.t1 | MTR_2g081090 | 37.624 | 202 | 94 | 5 | 68 | 253 | 63 | 248 | 1.77e-31 | 117 |
| MS.gene48506.t1 | MTR_5g098770 | 60.465 | 86 | 33 | 1 | 178 | 262 | 6 | 91 | 2.04e-29 | 107 |
| MS.gene48506.t1 | MTR_6g060175 | 35.047 | 214 | 91 | 8 | 68 | 265 | 91 | 272 | 4.64e-28 | 108 |
| MS.gene48506.t1 | MTR_6g043600 | 35.263 | 190 | 97 | 5 | 66 | 253 | 48 | 213 | 1.04e-26 | 104 |
| MS.gene48506.t1 | MTR_3g070340 | 29.870 | 231 | 96 | 4 | 60 | 243 | 59 | 270 | 4.96e-22 | 92.8 |
| MS.gene48506.t1 | MTR_2g436960 | 56.000 | 75 | 28 | 2 | 189 | 263 | 30 | 99 | 2.84e-18 | 78.2 |
| MS.gene48506.t1 | MTR_1g026550 | 41.237 | 97 | 52 | 2 | 49 | 140 | 103 | 199 | 1.11e-14 | 72.0 |
| MS.gene48506.t1 | MTR_0003s0060 | 47.368 | 76 | 35 | 2 | 191 | 266 | 25 | 95 | 6.19e-14 | 66.2 |
| MS.gene48506.t1 | MTR_6g074140 | 37.500 | 104 | 53 | 3 | 161 | 263 | 9 | 101 | 2.52e-12 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48506.t1 | AT1G45474 | 77.391 | 230 | 45 | 2 | 39 | 267 | 33 | 256 | 1.74e-129 | 367 |
| MS.gene48506.t1 | AT1G45474 | 77.391 | 230 | 45 | 2 | 39 | 267 | 33 | 256 | 1.74e-129 | 367 |
| MS.gene48506.t1 | AT3G47470 | 44.400 | 250 | 123 | 5 | 21 | 262 | 9 | 250 | 9.82e-64 | 200 |
| MS.gene48506.t1 | AT3G61470 | 48.598 | 214 | 106 | 3 | 50 | 262 | 44 | 254 | 1.00e-63 | 200 |
| MS.gene48506.t1 | AT1G61520 | 45.763 | 236 | 103 | 9 | 44 | 262 | 43 | 270 | 3.28e-58 | 187 |
| MS.gene48506.t1 | AT1G61520 | 45.763 | 236 | 103 | 9 | 44 | 262 | 43 | 270 | 3.28e-58 | 187 |
| MS.gene48506.t1 | AT1G19150 | 45.455 | 209 | 110 | 3 | 57 | 264 | 64 | 269 | 8.11e-56 | 181 |
| MS.gene48506.t1 | AT1G61520 | 47.087 | 206 | 88 | 8 | 74 | 262 | 14 | 215 | 3.02e-52 | 170 |
| MS.gene48506.t1 | AT1G15820 | 44.019 | 209 | 82 | 8 | 52 | 235 | 48 | 246 | 4.02e-41 | 142 |
| MS.gene48506.t1 | AT3G54890 | 39.806 | 206 | 96 | 6 | 61 | 258 | 48 | 233 | 1.18e-38 | 135 |
| MS.gene48506.t1 | AT1G76570 | 37.179 | 234 | 107 | 7 | 56 | 264 | 109 | 327 | 3.25e-37 | 134 |
| MS.gene48506.t1 | AT2G05100 | 35.686 | 255 | 134 | 7 | 21 | 253 | 3 | 249 | 9.02e-37 | 131 |
| MS.gene48506.t1 | AT2G05070 | 35.686 | 255 | 134 | 7 | 21 | 253 | 3 | 249 | 1.32e-36 | 131 |
| MS.gene48506.t1 | AT2G34430 | 41.237 | 194 | 101 | 4 | 66 | 253 | 64 | 250 | 1.84e-36 | 130 |
| MS.gene48506.t1 | AT2G34420 | 41.237 | 194 | 101 | 4 | 66 | 253 | 63 | 249 | 2.42e-36 | 130 |
| MS.gene48506.t1 | AT3G27690 | 35.985 | 264 | 143 | 7 | 2 | 253 | 1 | 250 | 2.65e-36 | 130 |
| MS.gene48506.t1 | AT3G27690 | 35.985 | 264 | 143 | 7 | 2 | 253 | 33 | 282 | 3.85e-36 | 130 |
| MS.gene48506.t1 | AT4G10340 | 37.129 | 202 | 117 | 4 | 68 | 267 | 82 | 275 | 1.09e-35 | 129 |
| MS.gene48506.t1 | AT1G29930 | 41.237 | 194 | 101 | 4 | 66 | 253 | 65 | 251 | 1.85e-35 | 128 |
| MS.gene48506.t1 | AT1G29920 | 41.237 | 194 | 101 | 4 | 66 | 253 | 65 | 251 | 1.93e-35 | 128 |
| MS.gene48506.t1 | AT1G29910 | 41.237 | 194 | 101 | 4 | 66 | 253 | 65 | 251 | 1.93e-35 | 128 |
| MS.gene48506.t1 | AT3G08940 | 32.593 | 270 | 104 | 6 | 49 | 265 | 43 | 287 | 1.70e-34 | 126 |
| MS.gene48506.t1 | AT5G01530 | 32.824 | 262 | 98 | 5 | 57 | 265 | 54 | 290 | 3.59e-33 | 122 |
| MS.gene48506.t1 | AT5G54270 | 37.255 | 204 | 92 | 5 | 68 | 253 | 64 | 249 | 1.87e-32 | 120 |
| MS.gene48506.t1 | AT2G05100 | 33.086 | 269 | 149 | 8 | 21 | 266 | 3 | 263 | 3.65e-30 | 115 |
| MS.gene48506.t1 | AT3G54890 | 37.811 | 201 | 73 | 6 | 61 | 258 | 48 | 199 | 1.47e-29 | 111 |
| MS.gene48506.t1 | AT3G54890 | 37.870 | 169 | 78 | 5 | 61 | 222 | 48 | 196 | 1.52e-25 | 100 |
| MS.gene48506.t1 | AT2G40100 | 29.630 | 243 | 92 | 7 | 57 | 246 | 55 | 271 | 1.22e-19 | 86.3 |
| MS.gene48506.t1 | AT3G54890 | 61.667 | 60 | 23 | 0 | 61 | 120 | 48 | 107 | 2.26e-18 | 80.5 |
| MS.gene48506.t1 | AT5G28450 | 43.434 | 99 | 53 | 2 | 162 | 259 | 71 | 167 | 4.87e-16 | 74.3 |
Find 76 sgRNAs with CRISPR-Local
Find 124 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAGTCTGCCTGGAGATTT+TGG | 0.083031 | 3.1:-80736273 | MS.gene48506:intron |
| GCTAAAGAGGGTTCCTTCTT+TGG | 0.210992 | 3.1:-80735553 | MS.gene48506:CDS |
| ACATACCACTTTAAGCTTTC+AGG | 0.257681 | 3.1:+80736222 | None:intergenic |
| CTTCGCGTCGCAGGAGTTAA+TGG | 0.271659 | 3.1:-80735816 | MS.gene48506:CDS |
| CTTTGCAATGCTTGGAGTCT+TGG | 0.296257 | 3.1:-80736175 | MS.gene48506:CDS |
| CGTTGTTCAACTACTCTTGA+TGG | 0.331931 | 3.1:-80735730 | MS.gene48506:CDS |
| TGGCTCAGGCCTGCTGCTGC+AGG | 0.332089 | 3.1:-80736494 | MS.gene48506:CDS |
| GAGTTAATGGCATACCAATT+TGG | 0.351396 | 3.1:-80735803 | MS.gene48506:CDS |
| TTAAAGAATGTTGCTGGAAA+TGG | 0.353609 | 3.1:+80736561 | None:intergenic |
| AGGCCTGCTGCTGCAGGAAC+GGG | 0.357983 | 3.1:-80736488 | MS.gene48506:CDS |
| CATTCTCGCTTTGCAATGCT+TGG | 0.365225 | 3.1:-80736183 | MS.gene48506:CDS |
| CCCTCTTTAGCTTGAGATCC+AGG | 0.372198 | 3.1:+80735565 | None:intergenic |
| GCACCAGCTTCAAACCAAAT+TGG | 0.375590 | 3.1:+80735789 | None:intergenic |
| TTTGCAATGCTTGGAGTCTT+GGG | 0.379571 | 3.1:-80736174 | MS.gene48506:CDS |
| CAGGCCTGCTGCTGCAGGAA+CGG | 0.383245 | 3.1:-80736489 | MS.gene48506:CDS |
| GGGTTCCTTCTTTGGATTGG+AGG | 0.390165 | 3.1:-80735545 | MS.gene48506:CDS |
| GGATTGGAGGCTTCACTTGG+AGG | 0.408465 | 3.1:-80735532 | MS.gene48506:CDS |
| CAGTGGTGTCCTGCTGTTGA+AGG | 0.408562 | 3.1:+80736515 | None:intergenic |
| TTAATCAACAGCAATGTCAT+TGG | 0.423067 | 3.1:-80736542 | MS.gene48506:CDS |
| AGAGGGTTCCTTCTTTGGAT+TGG | 0.425551 | 3.1:-80735548 | MS.gene48506:CDS |
| TTTGGATTGGAGGCTTCACT+TGG | 0.427397 | 3.1:-80735535 | MS.gene48506:CDS |
| CAGCAGCAGGCCTGAGCCAG+TGG | 0.431308 | 3.1:+80736498 | None:intergenic |
| TGTTGATTAAAGAATGTTGC+TGG | 0.432156 | 3.1:+80736555 | None:intergenic |
| TCACTTGGAGGCTTAGAGCC+AGG | 0.454641 | 3.1:-80735520 | MS.gene48506:CDS |
| GGTCCTCTGCTAAATCCTCT+TGG | 0.466721 | 3.1:-80735361 | MS.gene48506:CDS |
| ACAGCGACCCACATGGCTCC+CGG | 0.470053 | 3.1:-80736426 | MS.gene48506:CDS |
| CAGCAGGACACCACTGGCTC+AGG | 0.472502 | 3.1:-80736508 | MS.gene48506:CDS |
| GTTGTTCAACTACTCTTGAT+GGG | 0.474147 | 3.1:-80735729 | MS.gene48506:CDS |
| ACATTAAAAGTGCTCGTGAA+TGG | 0.476630 | 3.1:-80735327 | MS.gene48506:CDS |
| ACGTTCCATCAAGATAGGTC+GGG | 0.483613 | 3.1:+80736393 | None:intergenic |
| ACTCCCGTTCCTGCAGCAGC+AGG | 0.483851 | 3.1:+80736485 | None:intergenic |
| TGCTCCACAAGGTTATCAAT+TGG | 0.488850 | 3.1:+80735133 | None:intergenic |
| GGGTTCGACCCACTTGGACT+TGG | 0.499119 | 3.1:-80736252 | MS.gene48506:CDS |
| TCCTGGATCTCAAGCTAAAG+AGG | 0.502469 | 3.1:-80735566 | MS.gene48506:CDS |
| GTGGTATGTGCAAGCAGAGT+TGG | 0.513095 | 3.1:-80736208 | MS.gene48506:CDS |
| CTTGCAATGATAGCAATACT+TGG | 0.514098 | 3.1:-80735190 | MS.gene48506:CDS |
| ATCAAGTCCCGGGAGCCATG+TGG | 0.514514 | 3.1:+80736418 | None:intergenic |
| TTTCAACAAATAGGTACCCT+GGG | 0.517399 | 3.1:-80735384 | MS.gene48506:intron |
| TGCTGAAACAAGAAGGTACA+TGG | 0.520819 | 3.1:-80735599 | MS.gene48506:CDS |
| ATGCAGCTACTTCGCGTCGC+AGG | 0.521060 | 3.1:-80735825 | MS.gene48506:intron |
| CACTTGGAGGCTTAGAGCCA+GGG | 0.521376 | 3.1:-80735519 | MS.gene48506:intron |
| CAGCGACCCACATGGCTCCC+GGG | 0.535164 | 3.1:-80736425 | MS.gene48506:CDS |
| TCAAGTCCCGGGAGCCATGT+GGG | 0.535885 | 3.1:+80736419 | None:intergenic |
| ACTAAGAACTAGAACTTGCA+AGG | 0.536025 | 3.1:+80735074 | None:intergenic |
| TACGTTCCATCAAGATAGGT+CGG | 0.542041 | 3.1:+80736392 | None:intergenic |
| ATACCAATTTGGTTTGAAGC+TGG | 0.542713 | 3.1:-80735792 | MS.gene48506:CDS |
| GGGTCGAACCCAAAATCTCC+AGG | 0.547605 | 3.1:+80736264 | None:intergenic |
| CGTTCCATCAAGATAGGTCG+GGG | 0.549545 | 3.1:+80736394 | None:intergenic |
| GGCTTACGTTCCATCAAGAT+AGG | 0.552815 | 3.1:+80736388 | None:intergenic |
| AAGCTTAAAGAGATCAAGAA+TGG | 0.555296 | 3.1:-80735304 | MS.gene48506:intron |
| CTTCAACAGCAGGACACCAC+TGG | 0.557036 | 3.1:-80736514 | MS.gene48506:CDS |
| TGAAGCCTCCAATCCAAAGA+AGG | 0.557622 | 3.1:+80735540 | None:intergenic |
| GTTTCAACAAATAGGTACCC+TGG | 0.560016 | 3.1:-80735385 | MS.gene48506:intron |
| TGGAGCATCTCTCAAATCCA+TGG | 0.566001 | 3.1:-80735117 | MS.gene48506:CDS |
| ATTGGTAAACCTTCAACAGC+AGG | 0.584446 | 3.1:-80736524 | MS.gene48506:CDS |
| CAGCACAACAGCGACCCACA+TGG | 0.585644 | 3.1:-80736433 | MS.gene48506:CDS |
| CCTGGATCTCAAGCTAAAGA+GGG | 0.589518 | 3.1:-80735565 | MS.gene48506:CDS |
| CGACCCACTTGGACTTGGAG+AGG | 0.600286 | 3.1:-80736247 | MS.gene48506:CDS |
| CAAGCTTCAGTGACTCATGT+TGG | 0.608285 | 3.1:-80735157 | MS.gene48506:CDS |
| AAATACGAGTTTGCCAACAC+AGG | 0.611621 | 3.1:-80735762 | MS.gene48506:CDS |
| AGGATCCTGAAAGCTTAAAG+TGG | 0.613738 | 3.1:-80736227 | MS.gene48506:CDS |
| TTGTTCAACTACTCTTGATG+GGG | 0.618405 | 3.1:-80735728 | MS.gene48506:intron |
| AATACGAGTTTGCCAACACA+GGG | 0.621022 | 3.1:-80735761 | MS.gene48506:CDS |
| ACAGGTATGCTGAAACAAGA+AGG | 0.631208 | 3.1:-80735606 | MS.gene48506:intron |
| AACGACGAGTGTCCCTGTGT+TGG | 0.634037 | 3.1:+80735749 | None:intergenic |
| CTAAGAACTAGAACTTGCAA+GGG | 0.646168 | 3.1:+80735075 | None:intergenic |
| GCACAAATTTGTTTATAACG+TGG | 0.647469 | 3.1:+80736458 | None:intergenic |
| ATGTCTTTAGCTAGGCCAAG+AGG | 0.649507 | 3.1:+80735346 | None:intergenic |
| GGATCCTCTCCAAGTCCAAG+TGG | 0.657850 | 3.1:+80736243 | None:intergenic |
| GATTTGAGAGATGCTCCACA+AGG | 0.672076 | 3.1:+80735122 | None:intergenic |
| TGGACCAATTGATAACCTTG+TGG | 0.673898 | 3.1:-80735137 | MS.gene48506:CDS |
| GATCCTCTCCAAGTCCAAGT+GGG | 0.674722 | 3.1:+80736244 | None:intergenic |
| AGGCCAAGAGGATTTAGCAG+AGG | 0.679125 | 3.1:+80735358 | None:intergenic |
| TTCAACAAATAGGTACCCTG+GGG | 0.698699 | 3.1:-80735383 | MS.gene48506:intron |
| GTTCCATCAAGATAGGTCGG+GGG | 0.742215 | 3.1:+80736395 | None:intergenic |
| TCAACAAATAGGTACCCTGG+GGG | 0.781200 | 3.1:-80735382 | MS.gene48506:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACTTTGATTATATATATG+CGG | + | chr3.1:80735630-80735649 | None:intergenic | 15.0% |
| !!! | ATAATCAAAGTTTTGAATAA+AGG | - | chr3.1:80735637-80735656 | MS.gene48506:intron | 15.0% |
| !!! | TATGTTTTCTATATCATTAT+AGG | - | chr3.1:80736012-80736031 | MS.gene48506:intron | 15.0% |
| !!! | AACATAATGGTTTTATATTG+AGG | - | chr3.1:80735688-80735707 | MS.gene48506:intron | 20.0% |
| !!! | ATAATCTTGTTTCAACAAAT+AGG | - | chr3.1:80736275-80736294 | MS.gene48506:intron | 20.0% |
| !!! | ATTTAAAATCATGTATACGA+TGG | - | chr3.1:80735791-80735810 | MS.gene48506:CDS | 20.0% |
| !!! | GTATACATGATTTTAAATAG+CGG | + | chr3.1:80735789-80735808 | None:intergenic | 20.0% |
| ! | ACGAAGAAAAAAGAAAAACA+CGG | + | chr3.1:80736226-80736245 | None:intergenic | 25.0% |
| ! | CTCAATATAAAAAACGTTAC+TGG | + | chr3.1:80735580-80735599 | None:intergenic | 25.0% |
| ! | TCAAGTTATAGTAACGTTAA+GGG | - | chr3.1:80735365-80735384 | MS.gene48506:CDS | 25.0% |
| ! | TTGCAAATATTCTTGTTACA+GGG | - | chr3.1:80736452-80736471 | MS.gene48506:CDS | 25.0% |
| !! | CATAGATTGATAACAAGTTT+AGG | + | chr3.1:80735826-80735845 | None:intergenic | 25.0% |
| !! | TTCAAGTTATAGTAACGTTA+AGG | - | chr3.1:80735364-80735383 | MS.gene48506:CDS | 25.0% |
| !!! | TAATGGTTTTATATTGAGGT+TGG | - | chr3.1:80735692-80735711 | MS.gene48506:intron | 25.0% |
| !!! | TGAATAATAGTTTTATGCCA+TGG | + | chr3.1:80736571-80736590 | None:intergenic | 25.0% |
| !!! | TGGCATTTTAAGATGAATTT+AGG | + | chr3.1:80735330-80735349 | None:intergenic | 25.0% |
| AAGCTTAAAGAGATCAAGAA+TGG | - | chr3.1:80736364-80736383 | MS.gene48506:intron | 30.0% | |
| GTTGCAAATATTCTTGTTAC+AGG | - | chr3.1:80736451-80736470 | MS.gene48506:CDS | 30.0% | |
| TGATCTAAACTGCAACATAA+TGG | - | chr3.1:80735675-80735694 | MS.gene48506:intron | 30.0% | |
| TTAAAGAATGTTGCTGGAAA+TGG | + | chr3.1:80735110-80735129 | None:intergenic | 30.0% | |
| TTAATCAACAGCAATGTCAT+TGG | - | chr3.1:80735126-80735145 | MS.gene48506:CDS | 30.0% | |
| TTATTAACTTTCACTTGCAC+AGG | - | chr3.1:80736044-80736063 | MS.gene48506:intron | 30.0% | |
| ! | CACTTTTAATGTCTTTAGCT+AGG | + | chr3.1:80736333-80736352 | None:intergenic | 30.0% |
| ! | GCACAAATTTGTTTATAACG+TGG | + | chr3.1:80735213-80735232 | None:intergenic | 30.0% |
| ! | GTTTTATATTGAGGTTGGAT+TGG | - | chr3.1:80735697-80735716 | MS.gene48506:intron | 30.0% |
| ! | TGTTGATTAAAGAATGTTGC+TGG | + | chr3.1:80735116-80735135 | None:intergenic | 30.0% |
| ACATACCACTTTAAGCTTTC+AGG | + | chr3.1:80735449-80735468 | None:intergenic | 35.0% | |
| CTAAGAACTAGAACTTGCAA+GGG | + | chr3.1:80736596-80736615 | None:intergenic | 35.0% | |
| CTTGCAATGATAGCAATACT+TGG | - | chr3.1:80736478-80736497 | MS.gene48506:CDS | 35.0% | |
| GAGTTAATGGCATACCAATT+TGG | - | chr3.1:80735865-80735884 | MS.gene48506:intron | 35.0% | |
| GTTGTTCAACTACTCTTGAT+GGG | - | chr3.1:80735939-80735958 | MS.gene48506:intron | 35.0% | |
| TCACAATTGTAAGCTAGTTG+AGG | - | chr3.1:80736249-80736268 | MS.gene48506:CDS | 35.0% | |
| TGCAACTATGAAAACAAGCT+TGG | + | chr3.1:80736437-80736456 | None:intergenic | 35.0% | |
| TTGTTCAACTACTCTTGATG+GGG | - | chr3.1:80735940-80735959 | MS.gene48506:intron | 35.0% | |
| TTTCAACAAATAGGTACCCT+GGG | - | chr3.1:80736284-80736303 | MS.gene48506:intron | 35.0% | |
| ! | TACATGGATTTTGTTAGTCC+TGG | - | chr3.1:80736085-80736104 | MS.gene48506:intron | 35.0% |
| !! | ACATTAAAAGTGCTCGTGAA+TGG | - | chr3.1:80736341-80736360 | MS.gene48506:intron | 35.0% |
| !! | ATACCAATTTGGTTTGAAGC+TGG | - | chr3.1:80735876-80735895 | MS.gene48506:intron | 35.0% |
| AAATACGAGTTTGCCAACAC+AGG | - | chr3.1:80735906-80735925 | MS.gene48506:intron | 40.0% | |
| AATACGAGTTTGCCAACACA+GGG | - | chr3.1:80735907-80735926 | MS.gene48506:intron | 40.0% | |
| ACAGGTATGCTGAAACAAGA+AGG | - | chr3.1:80736062-80736081 | MS.gene48506:intron | 40.0% | |
| AGGATCCTGAAAGCTTAAAG+TGG | - | chr3.1:80735441-80735460 | MS.gene48506:intron | 40.0% | |
| ATTGGTAAACCTTCAACAGC+AGG | - | chr3.1:80735144-80735163 | MS.gene48506:CDS | 40.0% | |
| CGTTGTTCAACTACTCTTGA+TGG | - | chr3.1:80735938-80735957 | MS.gene48506:intron | 40.0% | |
| CTTGAAAAGAGAACTAGCAC+TGG | + | chr3.1:80735350-80735369 | None:intergenic | 40.0% | |
| GTGTGTGTTTGTACGGTTAT+CGG | + | chr3.1:80736186-80736205 | None:intergenic | 40.0% | |
| GTTTCAACAAATAGGTACCC+TGG | - | chr3.1:80736283-80736302 | MS.gene48506:intron | 40.0% | |
| GTTTGTACGGTTATCGGAAA+TGG | + | chr3.1:80736180-80736199 | None:intergenic | 40.0% | |
| TACGTTCCATCAAGATAGGT+CGG | + | chr3.1:80735279-80735298 | None:intergenic | 40.0% | |
| TAGAGAATCACAGCCAAACA+TGG | + | chr3.1:80735723-80735742 | None:intergenic | 40.0% | |
| TATCGGAAATGGAAATACCC+TGG | + | chr3.1:80736169-80736188 | None:intergenic | 40.0% | |
| TCAACTCATCAACCAGAAGT+TGG | + | chr3.1:80735987-80736006 | None:intergenic | 40.0% | |
| TGCACAAGTGTGTGTTTGTA+CGG | + | chr3.1:80736193-80736212 | None:intergenic | 40.0% | |
| TGCTCCACAAGGTTATCAAT+TGG | + | chr3.1:80736538-80736557 | None:intergenic | 40.0% | |
| TTAGGAGTCAAAATGCAGAG+AGG | + | chr3.1:80735312-80735331 | None:intergenic | 40.0% | |
| TTCAACAAATAGGTACCCTG+GGG | - | chr3.1:80736285-80736304 | MS.gene48506:intron | 40.0% | |
| TTGGCTGTGATTCTCTATCA+AGG | - | chr3.1:80735726-80735745 | MS.gene48506:intron | 40.0% | |
| TTTGCAATGCTTGGAGTCTT+GGG | - | chr3.1:80735494-80735513 | MS.gene48506:intron | 40.0% | |
| ! | TGCTGAAACAAGAAGGTACA+TGG | - | chr3.1:80736069-80736088 | MS.gene48506:intron | 40.0% |
| ! | TGGACCAATTGATAACCTTG+TGG | - | chr3.1:80736531-80736550 | MS.gene48506:CDS | 40.0% |
| ! | TTAGATCATCGTAGCTTTGC+AGG | + | chr3.1:80735663-80735682 | None:intergenic | 40.0% |
| !! | TGGGGTAGGATTTTAATCAC+TGG | - | chr3.1:80735958-80735977 | MS.gene48506:intron | 40.0% |
| AATCTCCAGGCAGACTGAAA+AGG | + | chr3.1:80735394-80735413 | None:intergenic | 45.0% | |
| ACGTTCCATCAAGATAGGTC+GGG | + | chr3.1:80735278-80735297 | None:intergenic | 45.0% | |
| AGAGGGTTCCTTCTTTGGAT+TGG | - | chr3.1:80736120-80736139 | MS.gene48506:intron | 45.0% | |
| ATGTCTTTAGCTAGGCCAAG+AGG | + | chr3.1:80736325-80736344 | None:intergenic | 45.0% | |
| CAAGCTTCAGTGACTCATGT+TGG | - | chr3.1:80736511-80736530 | MS.gene48506:CDS | 45.0% | |
| CATTCTCGCTTTGCAATGCT+TGG | - | chr3.1:80735485-80735504 | MS.gene48506:intron | 45.0% | |
| CCTGGATCTCAAGCTAAAGA+GGG | - | chr3.1:80736103-80736122 | MS.gene48506:intron | 45.0% | |
| CTTTGCAATGCTTGGAGTCT+TGG | - | chr3.1:80735493-80735512 | MS.gene48506:intron | 45.0% | |
| GATTTGAGAGATGCTCCACA+AGG | + | chr3.1:80736549-80736568 | None:intergenic | 45.0% | |
| GCACCAGCTTCAAACCAAAT+TGG | + | chr3.1:80735882-80735901 | None:intergenic | 45.0% | |
| GCTAAAGAGGGTTCCTTCTT+TGG | - | chr3.1:80736115-80736134 | MS.gene48506:intron | 45.0% | |
| GGCTTACGTTCCATCAAGAT+AGG | + | chr3.1:80735283-80735302 | None:intergenic | 45.0% | |
| TCAACAAATAGGTACCCTGG+GGG | - | chr3.1:80736286-80736305 | MS.gene48506:intron | 45.0% | |
| TCAACTACTCTTGATGGGGT+AGG | - | chr3.1:80735944-80735963 | MS.gene48506:intron | 45.0% | |
| TCCTGGATCTCAAGCTAAAG+AGG | - | chr3.1:80736102-80736121 | MS.gene48506:intron | 45.0% | |
| TGAAGCCTCCAATCCAAAGA+AGG | + | chr3.1:80736131-80736150 | None:intergenic | 45.0% | |
| ! | CAAAATGCAGAGAGGCGTAA+GGG | + | chr3.1:80735304-80735323 | None:intergenic | 45.0% |
| ! | TCAAAATGCAGAGAGGCGTA+AGG | + | chr3.1:80735305-80735324 | None:intergenic | 45.0% |
| ! | TCAGTCTGCCTGGAGATTTT+GGG | - | chr3.1:80735396-80735415 | MS.gene48506:intron | 45.0% |
| ! | TGGAGCATCTCTCAAATCCA+TGG | - | chr3.1:80736551-80736570 | MS.gene48506:CDS | 45.0% |
| ! | TTCAGTCTGCCTGGAGATTT+TGG | - | chr3.1:80735395-80735414 | MS.gene48506:intron | 45.0% |
| ! | TTTGGATTGGAGGCTTCACT+TGG | - | chr3.1:80736133-80736152 | MS.gene48506:intron | 45.0% |
| !! | AATCACTGGCTTCCAACTTC+TGG | - | chr3.1:80735972-80735991 | MS.gene48506:intron | 45.0% |
| AGGCCAAGAGGATTTAGCAG+AGG | + | chr3.1:80736313-80736332 | None:intergenic | 50.0% | |
| CGTTCCATCAAGATAGGTCG+GGG | + | chr3.1:80735277-80735296 | None:intergenic | 50.0% | |
| GATCCTCTCCAAGTCCAAGT+GGG | + | chr3.1:80735427-80735446 | None:intergenic | 50.0% | |
| GGTCCTCTGCTAAATCCTCT+TGG | - | chr3.1:80736307-80736326 | MS.gene48506:intron | 50.0% | |
| GTGGTATGTGCAAGCAGAGT+TGG | - | chr3.1:80735460-80735479 | MS.gene48506:intron | 50.0% | |
| GTTCCATCAAGATAGGTCGG+GGG | + | chr3.1:80735276-80735295 | None:intergenic | 50.0% | |
| ! | GGGTTCCTTCTTTGGATTGG+AGG | - | chr3.1:80736123-80736142 | MS.gene48506:intron | 50.0% |
| ! | GGTAACCTTTTCAGTCTGCC+TGG | - | chr3.1:80735386-80735405 | MS.gene48506:intron | 50.0% |
| !! | CCCTCTTTAGCTTGAGATCC+AGG | + | chr3.1:80736106-80736125 | None:intergenic | 50.0% |
| !! | GAGGTTGGATTGGCCATGTT+TGG | - | chr3.1:80735707-80735726 | MS.gene48506:intron | 50.0% |
| !!! | GATTTTGGGTTCGACCCACT+TGG | - | chr3.1:80735410-80735429 | MS.gene48506:intron | 50.0% |
| AACGACGAGTGTCCCTGTGT+TGG | + | chr3.1:80735922-80735941 | None:intergenic | 55.0% | |
| CACTTGGAGGCTTAGAGCCA+GGG | - | chr3.1:80736149-80736168 | MS.gene48506:intron | 55.0% | |
| CAGTGGTGTCCTGCTGTTGA+AGG | + | chr3.1:80735156-80735175 | None:intergenic | 55.0% | |
| CTTCAACAGCAGGACACCAC+TGG | - | chr3.1:80735154-80735173 | MS.gene48506:CDS | 55.0% | |
| CTTCGCGTCGCAGGAGTTAA+TGG | - | chr3.1:80735852-80735871 | MS.gene48506:intron | 55.0% | |
| GATCCCCCGACCTATCTTGA+TGG | - | chr3.1:80735270-80735289 | MS.gene48506:intron | 55.0% | |
| GATTTAGCAGAGGACCCCCA+GGG | + | chr3.1:80736303-80736322 | None:intergenic | 55.0% | |
| GGATCCTCTCCAAGTCCAAG+TGG | + | chr3.1:80735428-80735447 | None:intergenic | 55.0% | |
| GGATTGGAGGCTTCACTTGG+AGG | - | chr3.1:80736136-80736155 | MS.gene48506:intron | 55.0% | |
| GGGTCGAACCCAAAATCTCC+AGG | + | chr3.1:80735407-80735426 | None:intergenic | 55.0% | |
| TCACTTGGAGGCTTAGAGCC+AGG | - | chr3.1:80736148-80736167 | MS.gene48506:intron | 55.0% | |
| ATCAAGTCCCGGGAGCCATG+TGG | + | chr3.1:80735253-80735272 | None:intergenic | 60.0% | |
| ATGCAGCTACTTCGCGTCGC+AGG | - | chr3.1:80735843-80735862 | MS.gene48506:intron | 60.0% | |
| CAGCACAACAGCGACCCACA+TGG | - | chr3.1:80735235-80735254 | MS.gene48506:intron | 60.0% | |
| CGACCCACTTGGACTTGGAG+AGG | - | chr3.1:80735421-80735440 | MS.gene48506:intron | 60.0% | |
| GGATTTAGCAGAGGACCCCC+AGG | + | chr3.1:80736304-80736323 | None:intergenic | 60.0% | |
| GGGTTCGACCCACTTGGACT+TGG | - | chr3.1:80735416-80735435 | MS.gene48506:intron | 60.0% | |
| TAGGTCGGGGGATCAAGTCC+CGG | + | chr3.1:80735264-80735283 | None:intergenic | 60.0% | |
| TCAAGTCCCGGGAGCCATGT+GGG | + | chr3.1:80735252-80735271 | None:intergenic | 60.0% | |
| ACAGCGACCCACATGGCTCC+CGG | - | chr3.1:80735242-80735261 | MS.gene48506:intron | 65.0% | |
| ACTCCCGTTCCTGCAGCAGC+AGG | + | chr3.1:80735186-80735205 | None:intergenic | 65.0% | |
| AGGCCTGCTGCTGCAGGAAC+GGG | - | chr3.1:80735180-80735199 | MS.gene48506:CDS | 65.0% | |
| AGGTCGGGGGATCAAGTCCC+GGG | + | chr3.1:80735263-80735282 | None:intergenic | 65.0% | |
| CAGGCCTGCTGCTGCAGGAA+CGG | - | chr3.1:80735179-80735198 | MS.gene48506:CDS | 65.0% | |
| !! | CAGCAGGACACCACTGGCTC+AGG | - | chr3.1:80735160-80735179 | MS.gene48506:CDS | 65.0% |
| CAGCAGCAGGCCTGAGCCAG+TGG | + | chr3.1:80735173-80735192 | None:intergenic | 70.0% | |
| CAGCGACCCACATGGCTCCC+GGG | - | chr3.1:80735243-80735262 | MS.gene48506:intron | 70.0% | |
| TGGCTCAGGCCTGCTGCTGC+AGG | - | chr3.1:80735174-80735193 | MS.gene48506:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 80735075 | 80736615 | 80735075 | ID=MS.gene48506 |
| chr3.1 | mRNA | 80735075 | 80736615 | 80735075 | ID=MS.gene48506.t1;Parent=MS.gene48506 |
| chr3.1 | exon | 80736395 | 80736615 | 80736395 | ID=MS.gene48506.t1.exon1;Parent=MS.gene48506.t1 |
| chr3.1 | CDS | 80736395 | 80736615 | 80736395 | ID=cds.MS.gene48506.t1;Parent=MS.gene48506.t1 |
| chr3.1 | exon | 80736158 | 80736290 | 80736158 | ID=MS.gene48506.t1.exon2;Parent=MS.gene48506.t1 |
| chr3.1 | CDS | 80736158 | 80736290 | 80736158 | ID=cds.MS.gene48506.t1;Parent=MS.gene48506.t1 |
| chr3.1 | exon | 80735729 | 80735841 | 80735729 | ID=MS.gene48506.t1.exon3;Parent=MS.gene48506.t1 |
| chr3.1 | CDS | 80735729 | 80735841 | 80735729 | ID=cds.MS.gene48506.t1;Parent=MS.gene48506.t1 |
| chr3.1 | exon | 80735520 | 80735624 | 80735520 | ID=MS.gene48506.t1.exon4;Parent=MS.gene48506.t1 |
| chr3.1 | CDS | 80735520 | 80735624 | 80735520 | ID=cds.MS.gene48506.t1;Parent=MS.gene48506.t1 |
| chr3.1 | exon | 80735305 | 80735393 | 80735305 | ID=MS.gene48506.t1.exon5;Parent=MS.gene48506.t1 |
| chr3.1 | CDS | 80735305 | 80735393 | 80735305 | ID=cds.MS.gene48506.t1;Parent=MS.gene48506.t1 |
| chr3.1 | exon | 80735075 | 80735217 | 80735075 | ID=MS.gene48506.t1.exon6;Parent=MS.gene48506.t1 |
| chr3.1 | CDS | 80735075 | 80735217 | 80735075 | ID=cds.MS.gene48506.t1;Parent=MS.gene48506.t1 |
| Gene Sequence |
| Protein sequence |
