Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38715.t1 | XP_003603038.1 | 98.9 | 267 | 3 | 0 | 1 | 267 | 1 | 267 | 8.70E-149 | 536.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38715.t1 | Q9C639 | 77.4 | 230 | 45 | 2 | 39 | 267 | 33 | 256 | 2.6e-101 | 369.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38715.t1 | G7J6D2 | 98.9 | 267 | 3 | 0 | 1 | 267 | 1 | 267 | 6.3e-149 | 536.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene38715 | 0.824914 | 6.23E-54 | -1.69E-46 |
| MS.gene049171 | MS.gene38715 | 0.931936 | 1.80E-94 | -1.69E-46 |
| MS.gene049173 | MS.gene38715 | 0.893171 | 8.05E-75 | -1.69E-46 |
| MS.gene049217 | MS.gene38715 | 0.914582 | 1.62E-84 | -1.69E-46 |
| MS.gene049222 | MS.gene38715 | 0.925645 | 1.39E-90 | -1.69E-46 |
| MS.gene049232 | MS.gene38715 | 0.884094 | 2.57E-71 | -1.69E-46 |
| MS.gene049281 | MS.gene38715 | -0.820548 | 6.47E-53 | -1.69E-46 |
| MS.gene049285 | MS.gene38715 | 0.970006 | 5.77E-131 | -1.69E-46 |
| MS.gene049320 | MS.gene38715 | 0.962687 | 3.56E-121 | -1.69E-46 |
| MS.gene04938 | MS.gene38715 | 0.804053 | 2.60E-49 | -1.69E-46 |
| MS.gene04939 | MS.gene38715 | 0.868199 | 7.80E-66 | -1.69E-46 |
| MS.gene049427 | MS.gene38715 | 0.81904 | 1.43E-52 | -1.69E-46 |
| MS.gene049609 | MS.gene38715 | 0.894941 | 1.53E-75 | -1.69E-46 |
| MS.gene049611 | MS.gene38715 | -0.814926 | 1.20E-51 | -1.69E-46 |
| MS.gene049615 | MS.gene38715 | 0.815163 | 1.06E-51 | -1.69E-46 |
| MS.gene049627 | MS.gene38715 | 0.849786 | 2.59E-60 | -1.69E-46 |
| MS.gene049633 | MS.gene38715 | 0.889306 | 2.73E-73 | -1.69E-46 |
| MS.gene049634 | MS.gene38715 | -0.804106 | 2.53E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene38715 | 0.882476 | 1.01E-70 | -1.69E-46 |
| MS.gene05010 | MS.gene38715 | 0.909552 | 5.02E-82 | -1.69E-46 |
| MS.gene050163 | MS.gene38715 | 0.954877 | 1.10E-112 | -1.69E-46 |
| MS.gene050165 | MS.gene38715 | 0.955115 | 6.37E-113 | -1.69E-46 |
| MS.gene050170 | MS.gene38715 | 0.843975 | 1.01E-58 | -1.69E-46 |
| MS.gene050216 | MS.gene38715 | 0.842515 | 2.47E-58 | -1.69E-46 |
| MS.gene050323 | MS.gene38715 | 0.881489 | 2.30E-70 | -1.69E-46 |
| MS.gene050333 | MS.gene38715 | 0.943963 | 4.65E-103 | -1.69E-46 |
| MS.gene050353 | MS.gene38715 | -0.80996 | 1.46E-50 | -1.69E-46 |
| MS.gene050381 | MS.gene38715 | -0.825449 | 4.66E-54 | -1.69E-46 |
| MS.gene050444 | MS.gene38715 | 0.884517 | 1.79E-71 | -1.69E-46 |
| MS.gene050475 | MS.gene38715 | -0.805468 | 1.32E-49 | -1.69E-46 |
| MS.gene050493 | MS.gene38715 | -0.802598 | 5.20E-49 | -1.69E-46 |
| MS.gene050496 | MS.gene38715 | 0.871012 | 9.45E-67 | -1.69E-46 |
| MS.gene050504 | MS.gene38715 | 0.947761 | 3.58E-106 | -1.69E-46 |
| MS.gene050518 | MS.gene38715 | 0.938223 | 9.60E-99 | -1.69E-46 |
| MS.gene050538 | MS.gene38715 | 0.834495 | 2.90E-56 | -1.69E-46 |
| MS.gene050541 | MS.gene38715 | -0.800634 | 1.31E-48 | -1.69E-46 |
| MS.gene050577 | MS.gene38715 | 0.89965 | 1.61E-77 | -1.69E-46 |
| MS.gene050593 | MS.gene38715 | 0.849249 | 3.65E-60 | -1.69E-46 |
| MS.gene050612 | MS.gene38715 | 0.953614 | 1.86E-111 | -1.69E-46 |
| MS.gene050662 | MS.gene38715 | 0.839562 | 1.47E-57 | -1.69E-46 |
| MS.gene050675 | MS.gene38715 | 0.928237 | 3.84E-92 | -1.69E-46 |
| MS.gene050686 | MS.gene38715 | 0.821116 | 4.79E-53 | -1.69E-46 |
| MS.gene050690 | MS.gene38715 | 0.802538 | 5.35E-49 | -1.69E-46 |
| MS.gene050699 | MS.gene38715 | 0.942104 | 1.30E-101 | -1.69E-46 |
| MS.gene050747 | MS.gene38715 | 0.873491 | 1.41E-67 | -1.69E-46 |
| MS.gene050767 | MS.gene38715 | 0.842323 | 2.77E-58 | -1.69E-46 |
| MS.gene050770 | MS.gene38715 | 0.843803 | 1.12E-58 | -1.69E-46 |
| MS.gene050772 | MS.gene38715 | 0.92922 | 9.50E-93 | -1.69E-46 |
| MS.gene05079 | MS.gene38715 | -0.82547 | 4.61E-54 | -1.69E-46 |
| MS.gene05080 | MS.gene38715 | 0.88455 | 1.74E-71 | -1.69E-46 |
| MS.gene050832 | MS.gene38715 | -0.813188 | 2.90E-51 | -1.69E-46 |
| MS.gene050833 | MS.gene38715 | -0.826575 | 2.52E-54 | -1.69E-46 |
| MS.gene050868 | MS.gene38715 | 0.878378 | 2.95E-69 | -1.69E-46 |
| MS.gene050871 | MS.gene38715 | 0.875511 | 2.91E-68 | -1.69E-46 |
| MS.gene050876 | MS.gene38715 | 0.874712 | 5.45E-68 | -1.69E-46 |
| MS.gene05087 | MS.gene38715 | 0.802237 | 6.17E-49 | -1.69E-46 |
| MS.gene050883 | MS.gene38715 | -0.803508 | 3.37E-49 | -1.69E-46 |
| MS.gene050904 | MS.gene38715 | 0.84614 | 2.62E-59 | -1.69E-46 |
| MS.gene050950 | MS.gene38715 | 0.868143 | 8.13E-66 | -1.69E-46 |
| MS.gene050986 | MS.gene38715 | 0.938336 | 7.97E-99 | -1.69E-46 |
| MS.gene05100 | MS.gene38715 | 0.918816 | 9.77E-87 | -1.69E-46 |
| MS.gene051044 | MS.gene38715 | -0.807234 | 5.58E-50 | -1.69E-46 |
| MS.gene05104 | MS.gene38715 | -0.822479 | 2.32E-53 | -1.69E-46 |
| MS.gene051127 | MS.gene38715 | -0.825184 | 5.38E-54 | -1.69E-46 |
| MS.gene051138 | MS.gene38715 | -0.823751 | 1.17E-53 | -1.69E-46 |
| MS.gene051167 | MS.gene38715 | -0.802018 | 6.85E-49 | -1.69E-46 |
| MS.gene051228 | MS.gene38715 | 0.892299 | 1.80E-74 | -1.69E-46 |
| MS.gene051268 | MS.gene38715 | 0.837752 | 4.32E-57 | -1.69E-46 |
| MS.gene051317 | MS.gene38715 | 0.884952 | 1.24E-71 | -1.69E-46 |
| MS.gene051364 | MS.gene38715 | -0.826726 | 2.32E-54 | -1.69E-46 |
| MS.gene051366 | MS.gene38715 | -0.829591 | 4.73E-55 | -1.69E-46 |
| MS.gene051434 | MS.gene38715 | 0.810539 | 1.10E-50 | -1.69E-46 |
| MS.gene051551 | MS.gene38715 | 0.905871 | 2.71E-80 | -1.69E-46 |
| MS.gene051617 | MS.gene38715 | 0.82392 | 1.07E-53 | -1.69E-46 |
| MS.gene051651 | MS.gene38715 | -0.831125 | 1.99E-55 | -1.69E-46 |
| MS.gene051666 | MS.gene38715 | 0.854597 | 1.11E-61 | -1.69E-46 |
| MS.gene051694 | MS.gene38715 | 0.852765 | 3.73E-61 | -1.69E-46 |
| MS.gene051810 | MS.gene38715 | 0.939064 | 2.38E-99 | -1.69E-46 |
| MS.gene051838 | MS.gene38715 | 0.811838 | 5.73E-51 | -1.69E-46 |
| MS.gene051858 | MS.gene38715 | 0.860336 | 2.22E-63 | -1.69E-46 |
| MS.gene051874 | MS.gene38715 | 0.82701 | 1.98E-54 | -1.69E-46 |
| MS.gene051949 | MS.gene38715 | 0.9057 | 3.25E-80 | -1.69E-46 |
| MS.gene052129 | MS.gene38715 | -0.834695 | 2.58E-56 | -1.69E-46 |
| MS.gene052164 | MS.gene38715 | 0.883403 | 4.62E-71 | -1.69E-46 |
| MS.gene052271 | MS.gene38715 | 0.902977 | 5.58E-79 | -1.69E-46 |
| MS.gene052290 | MS.gene38715 | 0.800915 | 1.15E-48 | -1.69E-46 |
| MS.gene052379 | MS.gene38715 | 0.88787 | 9.76E-73 | -1.69E-46 |
| MS.gene052421 | MS.gene38715 | 0.805615 | 1.23E-49 | -1.69E-46 |
| MS.gene052482 | MS.gene38715 | 0.868597 | 5.80E-66 | -1.69E-46 |
| MS.gene052484 | MS.gene38715 | 0.800952 | 1.13E-48 | -1.69E-46 |
| MS.gene052486 | MS.gene38715 | 0.870639 | 1.25E-66 | -1.69E-46 |
| MS.gene052503 | MS.gene38715 | 0.866768 | 2.24E-65 | -1.69E-46 |
| MS.gene052504 | MS.gene38715 | 0.811408 | 7.11E-51 | -1.69E-46 |
| MS.gene052506 | MS.gene38715 | 0.850606 | 1.52E-60 | -1.69E-46 |
| MS.gene052605 | MS.gene38715 | 0.814298 | 1.65E-51 | -1.69E-46 |
| MS.gene052615 | MS.gene38715 | 0.882419 | 1.06E-70 | -1.69E-46 |
| MS.gene052670 | MS.gene38715 | 0.820304 | 7.36E-53 | -1.69E-46 |
| MS.gene052822 | MS.gene38715 | 0.87023 | 1.71E-66 | -1.69E-46 |
| MS.gene052823 | MS.gene38715 | 0.858527 | 7.75E-63 | -1.69E-46 |
| MS.gene052825 | MS.gene38715 | 0.853734 | 1.96E-61 | -1.69E-46 |
| MS.gene052870 | MS.gene38715 | 0.846624 | 1.93E-59 | -1.69E-46 |
| MS.gene052872 | MS.gene38715 | 0.866472 | 2.78E-65 | -1.69E-46 |
| MS.gene052916 | MS.gene38715 | 0.903339 | 3.84E-79 | -1.69E-46 |
| MS.gene052966 | MS.gene38715 | 0.867565 | 1.25E-65 | -1.69E-46 |
| MS.gene053009 | MS.gene38715 | 0.844847 | 5.87E-59 | -1.69E-46 |
| MS.gene053103 | MS.gene38715 | 0.80152 | 8.66E-49 | -1.69E-46 |
| MS.gene053104 | MS.gene38715 | 0.860326 | 2.23E-63 | -1.69E-46 |
| MS.gene053203 | MS.gene38715 | 0.881225 | 2.86E-70 | -1.69E-46 |
| MS.gene053207 | MS.gene38715 | 0.879492 | 1.19E-69 | -1.69E-46 |
| MS.gene053213 | MS.gene38715 | 0.938434 | 6.77E-99 | -1.69E-46 |
| MS.gene053284 | MS.gene38715 | 0.827791 | 1.29E-54 | -1.69E-46 |
| MS.gene053285 | MS.gene38715 | 0.819303 | 1.25E-52 | -1.69E-46 |
| MS.gene053286 | MS.gene38715 | 0.93847 | 6.38E-99 | -1.69E-46 |
| MS.gene053322 | MS.gene38715 | 0.875925 | 2.10E-68 | -1.69E-46 |
| MS.gene053420 | MS.gene38715 | -0.836471 | 9.18E-57 | -1.69E-46 |
| MS.gene053436 | MS.gene38715 | 0.846946 | 1.58E-59 | -1.69E-46 |
| MS.gene053479 | MS.gene38715 | 0.838044 | 3.63E-57 | -1.69E-46 |
| MS.gene053480 | MS.gene38715 | 0.838964 | 2.10E-57 | -1.69E-46 |
| MS.gene053561 | MS.gene38715 | -0.842157 | 3.07E-58 | -1.69E-46 |
| MS.gene053574 | MS.gene38715 | 0.891475 | 3.84E-74 | -1.69E-46 |
| MS.gene053626 | MS.gene38715 | 0.830127 | 3.50E-55 | -1.69E-46 |
| MS.gene053632 | MS.gene38715 | 0.921243 | 4.59E-88 | -1.69E-46 |
| MS.gene053633 | MS.gene38715 | 0.80518 | 1.51E-49 | -1.69E-46 |
| MS.gene053824 | MS.gene38715 | 0.873834 | 1.08E-67 | -1.69E-46 |
| MS.gene053915 | MS.gene38715 | 0.800697 | 1.28E-48 | -1.69E-46 |
| MS.gene053916 | MS.gene38715 | 0.890027 | 1.43E-73 | -1.69E-46 |
| MS.gene054003 | MS.gene38715 | 0.823717 | 1.19E-53 | -1.69E-46 |
| MS.gene054374 | MS.gene38715 | 0.821119 | 4.78E-53 | -1.69E-46 |
| MS.gene054376 | MS.gene38715 | 0.812169 | 4.85E-51 | -1.69E-46 |
| MS.gene054408 | MS.gene38715 | 0.847272 | 1.28E-59 | -1.69E-46 |
| MS.gene054595 | MS.gene38715 | 0.878239 | 3.30E-69 | -1.69E-46 |
| MS.gene054600 | MS.gene38715 | 0.913651 | 4.81E-84 | -1.69E-46 |
| MS.gene054616 | MS.gene38715 | -0.82445 | 8.02E-54 | -1.69E-46 |
| MS.gene054642 | MS.gene38715 | 0.978923 | 7.49E-147 | -1.69E-46 |
| MS.gene054706 | MS.gene38715 | -0.837575 | 4.79E-57 | -1.69E-46 |
| MS.gene054708 | MS.gene38715 | -0.803789 | 2.95E-49 | -1.69E-46 |
| MS.gene05470 | MS.gene38715 | 0.88768 | 1.15E-72 | -1.69E-46 |
| MS.gene054927 | MS.gene38715 | 0.81517 | 1.06E-51 | -1.69E-46 |
| MS.gene054954 | MS.gene38715 | 0.959425 | 1.99E-117 | -1.69E-46 |
| MS.gene054959 | MS.gene38715 | -0.829552 | 4.83E-55 | -1.69E-46 |
| MS.gene05505 | MS.gene38715 | 0.854202 | 1.44E-61 | -1.69E-46 |
| MS.gene055154 | MS.gene38715 | -0.854017 | 1.63E-61 | -1.69E-46 |
| MS.gene055206 | MS.gene38715 | 0.870571 | 1.32E-66 | -1.69E-46 |
| MS.gene055212 | MS.gene38715 | 0.879125 | 1.61E-69 | -1.69E-46 |
| MS.gene055224 | MS.gene38715 | 0.833223 | 6.03E-56 | -1.69E-46 |
| MS.gene055289 | MS.gene38715 | 0.836012 | 1.20E-56 | -1.69E-46 |
| MS.gene055362 | MS.gene38715 | 0.957619 | 1.75E-115 | -1.69E-46 |
| MS.gene055397 | MS.gene38715 | 0.865143 | 7.31E-65 | -1.69E-46 |
| MS.gene055499 | MS.gene38715 | 0.863952 | 1.72E-64 | -1.69E-46 |
| MS.gene055502 | MS.gene38715 | 0.944594 | 1.46E-103 | -1.69E-46 |
| MS.gene055577 | MS.gene38715 | 0.915885 | 3.45E-85 | -1.69E-46 |
| MS.gene055634 | MS.gene38715 | 0.861644 | 8.88E-64 | -1.69E-46 |
| MS.gene055636 | MS.gene38715 | 0.868022 | 8.89E-66 | -1.69E-46 |
| MS.gene055638 | MS.gene38715 | 0.889573 | 2.15E-73 | -1.69E-46 |
| MS.gene055647 | MS.gene38715 | 0.866744 | 2.28E-65 | -1.69E-46 |
| MS.gene055722 | MS.gene38715 | 0.893943 | 3.93E-75 | -1.69E-46 |
| MS.gene055748 | MS.gene38715 | 0.900249 | 8.85E-78 | -1.69E-46 |
| MS.gene055750 | MS.gene38715 | 0.886793 | 2.51E-72 | -1.69E-46 |
| MS.gene055751 | MS.gene38715 | 0.905646 | 3.45E-80 | -1.69E-46 |
| MS.gene055776 | MS.gene38715 | 0.906298 | 1.72E-80 | -1.69E-46 |
| MS.gene055849 | MS.gene38715 | 0.845503 | 3.90E-59 | -1.69E-46 |
| MS.gene05589 | MS.gene38715 | 0.872575 | 2.86E-67 | -1.69E-46 |
| MS.gene05592 | MS.gene38715 | 0.879067 | 1.69E-69 | -1.69E-46 |
| MS.gene055941 | MS.gene38715 | 0.893976 | 3.80E-75 | -1.69E-46 |
| MS.gene055942 | MS.gene38715 | -0.837185 | 6.04E-57 | -1.69E-46 |
| MS.gene055956 | MS.gene38715 | -0.873172 | 1.81E-67 | -1.69E-46 |
| MS.gene056046 | MS.gene38715 | 0.841705 | 4.04E-58 | -1.69E-46 |
| MS.gene056083 | MS.gene38715 | 0.878862 | 1.99E-69 | -1.69E-46 |
| MS.gene056224 | MS.gene38715 | -0.804603 | 2.00E-49 | -1.69E-46 |
| MS.gene056359 | MS.gene38715 | -0.812377 | 4.37E-51 | -1.69E-46 |
| MS.gene056374 | MS.gene38715 | 0.912068 | 2.97E-83 | -1.69E-46 |
| MS.gene056409 | MS.gene38715 | 0.82886 | 7.11E-55 | -1.69E-46 |
| MS.gene056446 | MS.gene38715 | 0.812241 | 4.68E-51 | -1.69E-46 |
| MS.gene056449 | MS.gene38715 | 0.827703 | 1.35E-54 | -1.69E-46 |
| MS.gene056487 | MS.gene38715 | 0.834756 | 2.49E-56 | -1.69E-46 |
| MS.gene056504 | MS.gene38715 | 0.91705 | 8.51E-86 | -1.69E-46 |
| MS.gene056510 | MS.gene38715 | 0.926715 | 3.20E-91 | -1.69E-46 |
| MS.gene056549 | MS.gene38715 | 0.847594 | 1.05E-59 | -1.69E-46 |
| MS.gene056550 | MS.gene38715 | -0.837254 | 5.79E-57 | -1.69E-46 |
| MS.gene056610 | MS.gene38715 | 0.83525 | 1.87E-56 | -1.69E-46 |
| MS.gene056657 | MS.gene38715 | 0.963603 | 2.75E-122 | -1.69E-46 |
| MS.gene056692 | MS.gene38715 | 0.900891 | 4.65E-78 | -1.69E-46 |
| MS.gene056761 | MS.gene38715 | -0.820478 | 6.72E-53 | -1.69E-46 |
| MS.gene056856 | MS.gene38715 | -0.821631 | 3.64E-53 | -1.69E-46 |
| MS.gene056897 | MS.gene38715 | 0.810271 | 1.25E-50 | -1.69E-46 |
| MS.gene056898 | MS.gene38715 | 0.863089 | 3.19E-64 | -1.69E-46 |
| MS.gene056946 | MS.gene38715 | 0.819628 | 1.05E-52 | -1.69E-46 |
| MS.gene057011 | MS.gene38715 | 0.8084 | 3.16E-50 | -1.69E-46 |
| MS.gene057014 | MS.gene38715 | -0.810451 | 1.15E-50 | -1.69E-46 |
| MS.gene057076 | MS.gene38715 | 0.868112 | 8.31E-66 | -1.69E-46 |
| MS.gene057086 | MS.gene38715 | 0.803107 | 4.08E-49 | -1.69E-46 |
| MS.gene057129 | MS.gene38715 | 0.895218 | 1.18E-75 | -1.69E-46 |
| MS.gene057146 | MS.gene38715 | 0.805913 | 1.06E-49 | -1.69E-46 |
| MS.gene057246 | MS.gene38715 | 0.848833 | 4.76E-60 | -1.69E-46 |
| MS.gene057331 | MS.gene38715 | 0.871227 | 8.02E-67 | -1.69E-46 |
| MS.gene057416 | MS.gene38715 | 0.91181 | 3.99E-83 | -1.69E-46 |
| MS.gene05753 | MS.gene38715 | 0.826026 | 3.40E-54 | -1.69E-46 |
| MS.gene057658 | MS.gene38715 | 0.854588 | 1.11E-61 | -1.69E-46 |
| MS.gene057734 | MS.gene38715 | 0.805884 | 1.08E-49 | -1.69E-46 |
| MS.gene057831 | MS.gene38715 | 0.888263 | 6.89E-73 | -1.69E-46 |
| MS.gene057856 | MS.gene38715 | 0.800865 | 1.18E-48 | -1.69E-46 |
| MS.gene057857 | MS.gene38715 | 0.822158 | 2.75E-53 | -1.69E-46 |
| MS.gene05787 | MS.gene38715 | 0.81536 | 9.62E-52 | -1.69E-46 |
| MS.gene057926 | MS.gene38715 | 0.860646 | 1.79E-63 | -1.69E-46 |
| MS.gene057986 | MS.gene38715 | 0.811786 | 5.88E-51 | -1.69E-46 |
| MS.gene058019 | MS.gene38715 | 0.862009 | 6.87E-64 | -1.69E-46 |
| MS.gene058117 | MS.gene38715 | -0.800158 | 1.64E-48 | -1.69E-46 |
| MS.gene058130 | MS.gene38715 | 0.826107 | 3.25E-54 | -1.69E-46 |
| MS.gene058268 | MS.gene38715 | -0.815886 | 7.35E-52 | -1.69E-46 |
| MS.gene058269 | MS.gene38715 | -0.814402 | 1.57E-51 | -1.69E-46 |
| MS.gene058323 | MS.gene38715 | 0.836392 | 9.61E-57 | -1.69E-46 |
| MS.gene058334 | MS.gene38715 | -0.852265 | 5.17E-61 | -1.69E-46 |
| MS.gene058335 | MS.gene38715 | 0.824936 | 6.16E-54 | -1.69E-46 |
| MS.gene058338 | MS.gene38715 | 0.855292 | 6.96E-62 | -1.69E-46 |
| MS.gene05837 | MS.gene38715 | 0.862794 | 3.94E-64 | -1.69E-46 |
| MS.gene058419 | MS.gene38715 | 0.95994 | 5.34E-118 | -1.69E-46 |
| MS.gene058544 | MS.gene38715 | 0.916364 | 1.95E-85 | -1.69E-46 |
| MS.gene058603 | MS.gene38715 | -0.806347 | 8.60E-50 | -1.69E-46 |
| MS.gene058719 | MS.gene38715 | 0.839234 | 1.79E-57 | -1.69E-46 |
| MS.gene058723 | MS.gene38715 | 0.902688 | 7.50E-79 | -1.69E-46 |
| MS.gene058773 | MS.gene38715 | 0.931868 | 2.00E-94 | -1.69E-46 |
| MS.gene058838 | MS.gene38715 | 0.879095 | 1.65E-69 | -1.69E-46 |
| MS.gene05883 | MS.gene38715 | 0.825035 | 5.84E-54 | -1.69E-46 |
| MS.gene058978 | MS.gene38715 | -0.806318 | 8.72E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene38715 | 0.955975 | 8.73E-114 | -1.69E-46 |
| MS.gene059023 | MS.gene38715 | 0.907518 | 4.65E-81 | -1.69E-46 |
| MS.gene059029 | MS.gene38715 | 0.892453 | 1.57E-74 | -1.69E-46 |
| MS.gene059079 | MS.gene38715 | 0.852714 | 3.85E-61 | -1.69E-46 |
| MS.gene059102 | MS.gene38715 | -0.800795 | 1.22E-48 | -1.69E-46 |
| MS.gene05912 | MS.gene38715 | 0.83724 | 5.84E-57 | -1.69E-46 |
| MS.gene05913 | MS.gene38715 | 0.889528 | 2.24E-73 | -1.69E-46 |
| MS.gene05914 | MS.gene38715 | 0.831378 | 1.73E-55 | -1.69E-46 |
| MS.gene059305 | MS.gene38715 | 0.802767 | 4.80E-49 | -1.69E-46 |
| MS.gene05934 | MS.gene38715 | 0.865329 | 6.39E-65 | -1.69E-46 |
| MS.gene059367 | MS.gene38715 | 0.837679 | 4.51E-57 | -1.69E-46 |
| MS.gene059479 | MS.gene38715 | -0.807188 | 5.71E-50 | -1.69E-46 |
| MS.gene059536 | MS.gene38715 | 0.84625 | 2.44E-59 | -1.69E-46 |
| MS.gene059667 | MS.gene38715 | 0.815522 | 8.86E-52 | -1.69E-46 |
| MS.gene059677 | MS.gene38715 | 0.966891 | 1.57E-126 | -1.69E-46 |
| MS.gene059699 | MS.gene38715 | -0.81519 | 1.05E-51 | -1.69E-46 |
| MS.gene059703 | MS.gene38715 | -0.818002 | 2.46E-52 | -1.69E-46 |
| MS.gene059718 | MS.gene38715 | 0.939206 | 1.87E-99 | -1.69E-46 |
| MS.gene059756 | MS.gene38715 | 0.890428 | 9.94E-74 | -1.69E-46 |
| MS.gene059801 | MS.gene38715 | 0.863207 | 2.93E-64 | -1.69E-46 |
| MS.gene059837 | MS.gene38715 | 0.807585 | 4.70E-50 | -1.69E-46 |
| MS.gene059858 | MS.gene38715 | 0.809077 | 2.26E-50 | -1.69E-46 |
| MS.gene059865 | MS.gene38715 | 0.926955 | 2.30E-91 | -1.69E-46 |
| MS.gene059902 | MS.gene38715 | 0.857618 | 1.44E-62 | -1.69E-46 |
| MS.gene059960 | MS.gene38715 | 0.865842 | 4.40E-65 | -1.69E-46 |
| MS.gene06000 | MS.gene38715 | 0.831134 | 1.98E-55 | -1.69E-46 |
| MS.gene060193 | MS.gene38715 | 0.819446 | 1.16E-52 | -1.69E-46 |
| MS.gene060337 | MS.gene38715 | -0.867929 | 9.52E-66 | -1.69E-46 |
| MS.gene060341 | MS.gene38715 | 0.85233 | 4.96E-61 | -1.69E-46 |
| MS.gene060482 | MS.gene38715 | 0.856464 | 3.16E-62 | -1.69E-46 |
| MS.gene060526 | MS.gene38715 | 0.807155 | 5.80E-50 | -1.69E-46 |
| MS.gene060595 | MS.gene38715 | -0.801397 | 9.18E-49 | -1.69E-46 |
| MS.gene060703 | MS.gene38715 | 0.927985 | 5.46E-92 | -1.69E-46 |
| MS.gene060727 | MS.gene38715 | 0.815111 | 1.09E-51 | -1.69E-46 |
| MS.gene060728 | MS.gene38715 | 0.857781 | 1.29E-62 | -1.69E-46 |
| MS.gene060762 | MS.gene38715 | 0.923098 | 4.15E-89 | -1.69E-46 |
| MS.gene060778 | MS.gene38715 | 0.858614 | 7.30E-63 | -1.69E-46 |
| MS.gene06077 | MS.gene38715 | 0.91312 | 8.89E-84 | -1.69E-46 |
| MS.gene060804 | MS.gene38715 | 0.853068 | 3.05E-61 | -1.69E-46 |
| MS.gene060818 | MS.gene38715 | 0.836452 | 9.28E-57 | -1.69E-46 |
| MS.gene060823 | MS.gene38715 | -0.823721 | 1.19E-53 | -1.69E-46 |
| MS.gene060835 | MS.gene38715 | 0.847234 | 1.32E-59 | -1.69E-46 |
| MS.gene06092 | MS.gene38715 | 0.880858 | 3.88E-70 | -1.69E-46 |
| MS.gene060982 | MS.gene38715 | 0.904515 | 1.13E-79 | -1.69E-46 |
| MS.gene061041 | MS.gene38715 | 0.840911 | 6.54E-58 | -1.69E-46 |
| MS.gene061134 | MS.gene38715 | 0.852222 | 5.32E-61 | -1.69E-46 |
| MS.gene061150 | MS.gene38715 | 0.92448 | 6.66E-90 | -1.69E-46 |
| MS.gene061171 | MS.gene38715 | 0.830795 | 2.40E-55 | -1.69E-46 |
| MS.gene061200 | MS.gene38715 | 0.882959 | 6.72E-71 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene38715 | MS.gene22752 | PPI |
| MS.gene98588 | MS.gene38715 | PPI |
| MS.gene025854 | MS.gene38715 | PPI |
| MS.gene050986 | MS.gene38715 | PPI |
| MS.gene38715 | MS.gene81067 | PPI |
| MS.gene25011 | MS.gene38715 | PPI |
| MS.gene039151 | MS.gene38715 | PPI |
| MS.gene08487 | MS.gene38715 | PPI |
| MS.gene040618 | MS.gene38715 | PPI |
| MS.gene88194 | MS.gene38715 | PPI |
| MS.gene38715 | MS.gene050699 | PPI |
| MS.gene38715 | MS.gene044778 | PPI |
| MS.gene66718 | MS.gene38715 | PPI |
| MS.gene38715 | MS.gene024386 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38715.t1 | MTR_3g101670 | 98.876 | 267 | 3 | 0 | 1 | 267 | 1 | 267 | 0.0 | 537 |
| MS.gene38715.t1 | MTR_3g435460 | 50.952 | 210 | 95 | 4 | 57 | 266 | 52 | 253 | 2.10e-66 | 207 |
| MS.gene38715.t1 | MTR_8g023790 | 50.237 | 211 | 100 | 4 | 51 | 259 | 55 | 262 | 3.24e-65 | 204 |
| MS.gene38715.t1 | MTR_5g098785 | 47.234 | 235 | 100 | 9 | 45 | 262 | 47 | 274 | 1.72e-60 | 192 |
| MS.gene38715.t1 | MTR_3g435460 | 50.777 | 193 | 87 | 4 | 74 | 266 | 8 | 192 | 9.31e-60 | 188 |
| MS.gene38715.t1 | MTR_5g098780 | 45.607 | 239 | 109 | 8 | 41 | 262 | 38 | 272 | 1.56e-59 | 190 |
| MS.gene38715.t1 | MTR_2g042720 | 48.325 | 209 | 104 | 3 | 57 | 264 | 61 | 266 | 2.99e-56 | 181 |
| MS.gene38715.t1 | MTR_6g033320 | 36.752 | 234 | 113 | 7 | 37 | 262 | 32 | 238 | 2.21e-40 | 140 |
| MS.gene38715.t1 | MTR_2g008610 | 44.221 | 199 | 84 | 6 | 58 | 235 | 57 | 249 | 2.84e-40 | 140 |
| MS.gene38715.t1 | MTR_1g026550 | 39.256 | 242 | 106 | 7 | 49 | 264 | 103 | 329 | 7.42e-40 | 141 |
| MS.gene38715.t1 | MTR_5g097280 | 41.667 | 192 | 98 | 4 | 68 | 253 | 66 | 249 | 1.16e-36 | 131 |
| MS.gene38715.t1 | MTR_4g094605 | 40.722 | 194 | 101 | 5 | 66 | 253 | 65 | 250 | 5.91e-36 | 129 |
| MS.gene38715.t1 | MTR_6g011880 | 39.409 | 203 | 91 | 6 | 66 | 253 | 64 | 249 | 1.91e-35 | 128 |
| MS.gene38715.t1 | MTR_6g011870 | 39.409 | 203 | 91 | 6 | 66 | 253 | 64 | 249 | 2.24e-35 | 127 |
| MS.gene38715.t1 | MTR_6g011890 | 39.409 | 203 | 91 | 6 | 66 | 253 | 64 | 249 | 3.77e-35 | 127 |
| MS.gene38715.t1 | MTR_6g012080 | 38.424 | 203 | 93 | 6 | 66 | 253 | 64 | 249 | 1.46e-34 | 125 |
| MS.gene38715.t1 | MTR_4g015570 | 33.333 | 264 | 98 | 5 | 55 | 265 | 51 | 289 | 1.85e-34 | 125 |
| MS.gene38715.t1 | MTR_6g012110 | 38.424 | 203 | 93 | 6 | 66 | 253 | 64 | 249 | 2.28e-34 | 125 |
| MS.gene38715.t1 | MTR_6g060175 | 37.383 | 214 | 96 | 7 | 68 | 265 | 91 | 282 | 3.30e-34 | 125 |
| MS.gene38715.t1 | MTR_2g081090 | 38.119 | 202 | 93 | 6 | 68 | 253 | 36 | 221 | 1.67e-31 | 117 |
| MS.gene38715.t1 | MTR_2g081090 | 37.624 | 202 | 94 | 5 | 68 | 253 | 63 | 248 | 2.31e-31 | 117 |
| MS.gene38715.t1 | MTR_5g098770 | 60.465 | 86 | 33 | 1 | 178 | 262 | 6 | 91 | 2.76e-29 | 106 |
| MS.gene38715.t1 | MTR_6g060175 | 35.047 | 214 | 91 | 8 | 68 | 265 | 91 | 272 | 5.48e-28 | 108 |
| MS.gene38715.t1 | MTR_6g043600 | 35.263 | 190 | 97 | 5 | 66 | 253 | 48 | 213 | 1.38e-26 | 103 |
| MS.gene38715.t1 | MTR_3g070340 | 30.303 | 231 | 95 | 4 | 60 | 243 | 59 | 270 | 3.26e-22 | 93.2 |
| MS.gene38715.t1 | MTR_2g436960 | 56.000 | 75 | 28 | 2 | 189 | 263 | 30 | 99 | 3.57e-18 | 77.8 |
| MS.gene38715.t1 | MTR_1g026550 | 41.237 | 97 | 52 | 2 | 49 | 140 | 103 | 199 | 1.10e-14 | 72.0 |
| MS.gene38715.t1 | MTR_0003s0060 | 47.368 | 76 | 35 | 2 | 191 | 266 | 25 | 95 | 7.37e-14 | 66.2 |
| MS.gene38715.t1 | MTR_6g074140 | 37.500 | 104 | 53 | 3 | 161 | 263 | 9 | 101 | 2.90e-12 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38715.t1 | AT1G45474 | 77.391 | 230 | 45 | 2 | 39 | 267 | 33 | 256 | 1.63e-129 | 367 |
| MS.gene38715.t1 | AT1G45474 | 77.391 | 230 | 45 | 2 | 39 | 267 | 33 | 256 | 1.63e-129 | 367 |
| MS.gene38715.t1 | AT3G47470 | 44.400 | 250 | 123 | 5 | 21 | 262 | 9 | 250 | 9.82e-64 | 200 |
| MS.gene38715.t1 | AT3G61470 | 48.598 | 214 | 106 | 3 | 50 | 262 | 44 | 254 | 1.22e-63 | 200 |
| MS.gene38715.t1 | AT1G61520 | 45.763 | 236 | 103 | 9 | 44 | 262 | 43 | 270 | 4.16e-58 | 186 |
| MS.gene38715.t1 | AT1G61520 | 45.763 | 236 | 103 | 9 | 44 | 262 | 43 | 270 | 4.16e-58 | 186 |
| MS.gene38715.t1 | AT1G19150 | 45.455 | 209 | 110 | 3 | 57 | 264 | 64 | 269 | 1.13e-55 | 180 |
| MS.gene38715.t1 | AT1G61520 | 47.087 | 206 | 88 | 8 | 74 | 262 | 14 | 215 | 3.67e-52 | 169 |
| MS.gene38715.t1 | AT1G15820 | 44.498 | 209 | 81 | 8 | 52 | 235 | 48 | 246 | 2.71e-41 | 143 |
| MS.gene38715.t1 | AT3G54890 | 39.806 | 206 | 96 | 6 | 61 | 258 | 48 | 233 | 1.68e-38 | 135 |
| MS.gene38715.t1 | AT1G76570 | 37.607 | 234 | 106 | 7 | 56 | 264 | 109 | 327 | 2.13e-37 | 134 |
| MS.gene38715.t1 | AT2G05100 | 35.686 | 255 | 134 | 7 | 21 | 253 | 3 | 249 | 1.28e-36 | 131 |
| MS.gene38715.t1 | AT2G05070 | 35.686 | 255 | 134 | 7 | 21 | 253 | 3 | 249 | 1.65e-36 | 130 |
| MS.gene38715.t1 | AT3G27690 | 35.985 | 264 | 143 | 7 | 2 | 253 | 1 | 250 | 2.46e-36 | 130 |
| MS.gene38715.t1 | AT2G34430 | 41.237 | 194 | 101 | 4 | 66 | 253 | 64 | 250 | 2.67e-36 | 130 |
| MS.gene38715.t1 | AT2G34420 | 41.237 | 194 | 101 | 4 | 66 | 253 | 63 | 249 | 3.03e-36 | 130 |
| MS.gene38715.t1 | AT3G27690 | 35.985 | 264 | 143 | 7 | 2 | 253 | 33 | 282 | 4.56e-36 | 130 |
| MS.gene38715.t1 | AT4G10340 | 37.129 | 202 | 117 | 4 | 68 | 267 | 82 | 275 | 1.33e-35 | 129 |
| MS.gene38715.t1 | AT1G29930 | 41.237 | 194 | 101 | 4 | 66 | 253 | 65 | 251 | 2.36e-35 | 127 |
| MS.gene38715.t1 | AT1G29920 | 41.237 | 194 | 101 | 4 | 66 | 253 | 65 | 251 | 2.54e-35 | 127 |
| MS.gene38715.t1 | AT1G29910 | 41.237 | 194 | 101 | 4 | 66 | 253 | 65 | 251 | 2.54e-35 | 127 |
| MS.gene38715.t1 | AT3G08940 | 32.963 | 270 | 103 | 6 | 49 | 265 | 43 | 287 | 1.07e-34 | 126 |
| MS.gene38715.t1 | AT5G01530 | 33.206 | 262 | 97 | 5 | 57 | 265 | 54 | 290 | 2.36e-33 | 123 |
| MS.gene38715.t1 | AT5G54270 | 37.255 | 204 | 92 | 5 | 68 | 253 | 64 | 249 | 2.56e-32 | 119 |
| MS.gene38715.t1 | AT2G05100 | 33.086 | 269 | 149 | 8 | 21 | 266 | 3 | 263 | 4.88e-30 | 115 |
| MS.gene38715.t1 | AT3G54890 | 37.811 | 201 | 73 | 6 | 61 | 258 | 48 | 199 | 1.78e-29 | 110 |
| MS.gene38715.t1 | AT3G54890 | 37.870 | 169 | 78 | 5 | 61 | 222 | 48 | 196 | 1.53e-25 | 100 |
| MS.gene38715.t1 | AT2G40100 | 30.041 | 243 | 91 | 7 | 57 | 246 | 55 | 271 | 7.86e-20 | 86.7 |
| MS.gene38715.t1 | AT3G54890 | 61.667 | 60 | 23 | 0 | 61 | 120 | 48 | 107 | 2.33e-18 | 80.5 |
| MS.gene38715.t1 | AT5G28450 | 43.434 | 99 | 53 | 2 | 162 | 259 | 71 | 167 | 6.23e-16 | 73.9 |
Find 77 sgRNAs with CRISPR-Local
Find 125 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAGTCTGCCTGGAGATTT+TGG | 0.083031 | 3.3:-84187376 | MS.gene38715:intron |
| GCTAAAGAGGGTTCCTTCTT+TGG | 0.210992 | 3.3:-84186656 | MS.gene38715:CDS |
| ACATACCACTTTAAGCTTTC+AGG | 0.257681 | 3.3:+84187325 | None:intergenic |
| CTTCGCGTCGCAGGAGTTAA+TGG | 0.271659 | 3.3:-84186919 | MS.gene38715:CDS |
| CTTTGCAATGCTTGGAGTCT+TGG | 0.296257 | 3.3:-84187278 | MS.gene38715:CDS |
| CGTTGTTCAACTACTCTTGA+TGG | 0.331931 | 3.3:-84186833 | MS.gene38715:CDS |
| TGGCTCAGGCCTGCTGCTGC+AGG | 0.332089 | 3.3:-84187597 | MS.gene38715:CDS |
| GAGTTAATGGCATACCAATT+TGG | 0.351396 | 3.3:-84186906 | MS.gene38715:CDS |
| TTAAAGAATGTTGCTGGAAA+TGG | 0.353609 | 3.3:+84187664 | None:intergenic |
| AGGCCTGCTGCTGCAGGAAC+GGG | 0.357983 | 3.3:-84187591 | MS.gene38715:CDS |
| CATTCTCGCTTTGCAATGCT+TGG | 0.365225 | 3.3:-84187286 | MS.gene38715:CDS |
| CCCTCTTTAGCTTGAGATCC+AGG | 0.372198 | 3.3:+84186668 | None:intergenic |
| GCACCAGCTTCAAACCAAAT+TGG | 0.375590 | 3.3:+84186892 | None:intergenic |
| TTTGCAATGCTTGGAGTCTT+GGG | 0.379571 | 3.3:-84187277 | MS.gene38715:CDS |
| CAGGCCTGCTGCTGCAGGAA+CGG | 0.383245 | 3.3:-84187592 | MS.gene38715:CDS |
| GGGTTCCTTCTTTGGATTGG+AGG | 0.390165 | 3.3:-84186648 | MS.gene38715:CDS |
| GGATTGGAGGCTTCACTTGG+AGG | 0.408465 | 3.3:-84186635 | MS.gene38715:CDS |
| CAGTGGTGTCCTGCTGTTGA+AGG | 0.408562 | 3.3:+84187618 | None:intergenic |
| TTAATCAACAGCAATGTCAT+TGG | 0.423067 | 3.3:-84187645 | MS.gene38715:CDS |
| AGAGGGTTCCTTCTTTGGAT+TGG | 0.425551 | 3.3:-84186651 | MS.gene38715:CDS |
| TTTGGATTGGAGGCTTCACT+TGG | 0.427397 | 3.3:-84186638 | MS.gene38715:CDS |
| CAGCAGCAGGCCTGAGCCAG+TGG | 0.431308 | 3.3:+84187601 | None:intergenic |
| TGTTGATTAAAGAATGTTGC+TGG | 0.432156 | 3.3:+84187658 | None:intergenic |
| CTTGCAATGGTAGCAATACT+TGG | 0.449516 | 3.3:-84186293 | MS.gene38715:CDS |
| TCACTTGGAGGCTTAGAGCC+AGG | 0.454641 | 3.3:-84186623 | MS.gene38715:CDS |
| GGTCCTCTGCTAAATCCTCT+TGG | 0.466721 | 3.3:-84186464 | MS.gene38715:CDS |
| ACAGCGACCCACATGGCTCC+CGG | 0.470053 | 3.3:-84187529 | MS.gene38715:CDS |
| CAGCAGGACACCACTGGCTC+AGG | 0.472502 | 3.3:-84187611 | MS.gene38715:CDS |
| GTTGTTCAACTACTCTTGAT+GGG | 0.474147 | 3.3:-84186832 | MS.gene38715:CDS |
| ACATTAAAAGTGCTCGTGAA+TGG | 0.476630 | 3.3:-84186430 | MS.gene38715:CDS |
| ACGTTCCATCAAGATAGGTC+GGG | 0.483613 | 3.3:+84187496 | None:intergenic |
| ACTCCCGTTCCTGCAGCAGC+AGG | 0.483851 | 3.3:+84187588 | None:intergenic |
| TGCTCCACAAGGTTATCAAT+TGG | 0.488850 | 3.3:+84186236 | None:intergenic |
| GGGTTCGACCCACTTGGACT+TGG | 0.499119 | 3.3:-84187355 | MS.gene38715:CDS |
| TCCTGGATCTCAAGCTAAAG+AGG | 0.502469 | 3.3:-84186669 | MS.gene38715:CDS |
| GTGGTATGTGCAAGCAGAGT+TGG | 0.513095 | 3.3:-84187311 | MS.gene38715:CDS |
| ATCAAGTCCCGGGAGCCATG+TGG | 0.514514 | 3.3:+84187521 | None:intergenic |
| TTTCAACAAATAGGTACCCT+GGG | 0.517399 | 3.3:-84186487 | MS.gene38715:intron |
| TGCTGAAACAAGAAGGTACA+TGG | 0.520819 | 3.3:-84186702 | MS.gene38715:CDS |
| ATGCAGCTACTTCGCGTCGC+AGG | 0.521060 | 3.3:-84186928 | MS.gene38715:intron |
| CACTTGGAGGCTTAGAGCCA+GGG | 0.521376 | 3.3:-84186622 | MS.gene38715:intron |
| CAGCGACCCACATGGCTCCC+GGG | 0.535164 | 3.3:-84187528 | MS.gene38715:CDS |
| TCAAGTCCCGGGAGCCATGT+GGG | 0.535885 | 3.3:+84187522 | None:intergenic |
| ACTAAGAACTAGAACTTGCA+AGG | 0.536025 | 3.3:+84186177 | None:intergenic |
| TACGTTCCATCAAGATAGGT+CGG | 0.542041 | 3.3:+84187495 | None:intergenic |
| ATACCAATTTGGTTTGAAGC+TGG | 0.542713 | 3.3:-84186895 | MS.gene38715:CDS |
| GGGTCGAACCCAAAATCTCC+AGG | 0.547605 | 3.3:+84187367 | None:intergenic |
| CGTTCCATCAAGATAGGTCG+GGG | 0.549545 | 3.3:+84187497 | None:intergenic |
| GGCTTACGTTCCATCAAGAT+AGG | 0.552815 | 3.3:+84187491 | None:intergenic |
| AAGCTTAAAGAGATCAAGAA+TGG | 0.555296 | 3.3:-84186407 | MS.gene38715:intron |
| CTTCAACAGCAGGACACCAC+TGG | 0.557036 | 3.3:-84187617 | MS.gene38715:CDS |
| TGAAGCCTCCAATCCAAAGA+AGG | 0.557622 | 3.3:+84186643 | None:intergenic |
| GTTTCAACAAATAGGTACCC+TGG | 0.560016 | 3.3:-84186488 | MS.gene38715:intron |
| TGGAGCATCTCTCAAATCCA+TGG | 0.566001 | 3.3:-84186220 | MS.gene38715:CDS |
| TGTTACAGGGCGACTTGCAA+TGG | 0.566623 | 3.3:-84186306 | MS.gene38715:intron |
| ATTGGTAAACCTTCAACAGC+AGG | 0.584446 | 3.3:-84187627 | MS.gene38715:CDS |
| CAGCACAACAGCGACCCACA+TGG | 0.585644 | 3.3:-84187536 | MS.gene38715:CDS |
| CCTGGATCTCAAGCTAAAGA+GGG | 0.589518 | 3.3:-84186668 | MS.gene38715:CDS |
| CGACCCACTTGGACTTGGAG+AGG | 0.600286 | 3.3:-84187350 | MS.gene38715:CDS |
| CAAGCTTCAGTGACTCATGT+TGG | 0.608285 | 3.3:-84186260 | MS.gene38715:CDS |
| AAATACGAGTTTGCCAACAC+AGG | 0.611621 | 3.3:-84186865 | MS.gene38715:CDS |
| AGGATCCTGAAAGCTTAAAG+TGG | 0.613738 | 3.3:-84187330 | MS.gene38715:CDS |
| TTGTTCAACTACTCTTGATG+GGG | 0.618405 | 3.3:-84186831 | MS.gene38715:intron |
| AATACGAGTTTGCCAACACA+GGG | 0.621022 | 3.3:-84186864 | MS.gene38715:CDS |
| ACAGGTATGCTGAAACAAGA+AGG | 0.631208 | 3.3:-84186709 | MS.gene38715:intron |
| AACGACGAGTGTCCCTGTGT+TGG | 0.634037 | 3.3:+84186852 | None:intergenic |
| CTAAGAACTAGAACTTGCAA+GGG | 0.646168 | 3.3:+84186178 | None:intergenic |
| GCACAAATTTGTTTATAACG+TGG | 0.647469 | 3.3:+84187561 | None:intergenic |
| ATGTCTTTAGCTAGGCCAAG+AGG | 0.649507 | 3.3:+84186449 | None:intergenic |
| GGATCCTCTCCAAGTCCAAG+TGG | 0.657850 | 3.3:+84187346 | None:intergenic |
| GATTTGAGAGATGCTCCACA+AGG | 0.672076 | 3.3:+84186225 | None:intergenic |
| TGGACCAATTGATAACCTTG+TGG | 0.673898 | 3.3:-84186240 | MS.gene38715:CDS |
| GATCCTCTCCAAGTCCAAGT+GGG | 0.674722 | 3.3:+84187347 | None:intergenic |
| AGGCCAAGAGGATTTAGCAG+AGG | 0.679125 | 3.3:+84186461 | None:intergenic |
| TTCAACAAATAGGTACCCTG+GGG | 0.698699 | 3.3:-84186486 | MS.gene38715:intron |
| GTTCCATCAAGATAGGTCGG+GGG | 0.742215 | 3.3:+84187498 | None:intergenic |
| TCAACAAATAGGTACCCTGG+GGG | 0.781200 | 3.3:-84186485 | MS.gene38715:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACTTTGATTATATATATG+CGG | + | chr3.3:84186733-84186752 | None:intergenic | 15.0% |
| !!! | ATAATCAAAGTTTTGAATAA+AGG | - | chr3.3:84186740-84186759 | MS.gene38715:intron | 15.0% |
| !!! | TATGTTTTCTATATCATTAT+AGG | - | chr3.3:84187115-84187134 | MS.gene38715:intron | 15.0% |
| !!! | AACATAATGGTTTTATATTG+AGG | - | chr3.3:84186791-84186810 | MS.gene38715:intron | 20.0% |
| !!! | ATAATCTTGTTTCAACAAAT+AGG | - | chr3.3:84187378-84187397 | MS.gene38715:intron | 20.0% |
| !!! | ATTTAAAATCATGTATACGA+TGG | - | chr3.3:84186894-84186913 | MS.gene38715:CDS | 20.0% |
| !!! | GTATACATGATTTTAAATAG+CGG | + | chr3.3:84186892-84186911 | None:intergenic | 20.0% |
| ! | ACGAAGAAAAAAGAAAAACA+CGG | + | chr3.3:84187329-84187348 | None:intergenic | 25.0% |
| ! | CTCAATATAAAAAACGTTAC+TGG | + | chr3.3:84186683-84186702 | None:intergenic | 25.0% |
| ! | TCAAGTTATAGTAACGTTAA+GGG | - | chr3.3:84186468-84186487 | MS.gene38715:CDS | 25.0% |
| ! | TTGCAAATATTCTTGTTACA+GGG | - | chr3.3:84187555-84187574 | MS.gene38715:CDS | 25.0% |
| !! | CATAGATTGATAACAAGTTT+AGG | + | chr3.3:84186929-84186948 | None:intergenic | 25.0% |
| !! | TTCAAGTTATAGTAACGTTA+AGG | - | chr3.3:84186467-84186486 | MS.gene38715:CDS | 25.0% |
| !!! | TAATGGTTTTATATTGAGGT+TGG | - | chr3.3:84186795-84186814 | MS.gene38715:intron | 25.0% |
| !!! | TGAATAATAGTTTTATGCCA+TGG | + | chr3.3:84187674-84187693 | None:intergenic | 25.0% |
| !!! | TGGCATTTTAAGATGAATTT+AGG | + | chr3.3:84186433-84186452 | None:intergenic | 25.0% |
| AAGCTTAAAGAGATCAAGAA+TGG | - | chr3.3:84187467-84187486 | MS.gene38715:intron | 30.0% | |
| GTTGCAAATATTCTTGTTAC+AGG | - | chr3.3:84187554-84187573 | MS.gene38715:CDS | 30.0% | |
| TGATCTAAACTGCAACATAA+TGG | - | chr3.3:84186778-84186797 | MS.gene38715:intron | 30.0% | |
| TTAAAGAATGTTGCTGGAAA+TGG | + | chr3.3:84186213-84186232 | None:intergenic | 30.0% | |
| TTAATCAACAGCAATGTCAT+TGG | - | chr3.3:84186229-84186248 | MS.gene38715:CDS | 30.0% | |
| TTATTAACTTTCACTTGCAC+AGG | - | chr3.3:84187147-84187166 | MS.gene38715:intron | 30.0% | |
| ! | CACTTTTAATGTCTTTAGCT+AGG | + | chr3.3:84187436-84187455 | None:intergenic | 30.0% |
| ! | GCACAAATTTGTTTATAACG+TGG | + | chr3.3:84186316-84186335 | None:intergenic | 30.0% |
| ! | GTTTTATATTGAGGTTGGAT+TGG | - | chr3.3:84186800-84186819 | MS.gene38715:intron | 30.0% |
| ! | TGTTGATTAAAGAATGTTGC+TGG | + | chr3.3:84186219-84186238 | None:intergenic | 30.0% |
| ACATACCACTTTAAGCTTTC+AGG | + | chr3.3:84186552-84186571 | None:intergenic | 35.0% | |
| CTAAGAACTAGAACTTGCAA+GGG | + | chr3.3:84187699-84187718 | None:intergenic | 35.0% | |
| GAGTTAATGGCATACCAATT+TGG | - | chr3.3:84186968-84186987 | MS.gene38715:intron | 35.0% | |
| GTTGTTCAACTACTCTTGAT+GGG | - | chr3.3:84187042-84187061 | MS.gene38715:intron | 35.0% | |
| TCACAATTGTAAGCTAGTTG+AGG | - | chr3.3:84187352-84187371 | MS.gene38715:CDS | 35.0% | |
| TGCAACTATGAAAACAAGCT+TGG | + | chr3.3:84187540-84187559 | None:intergenic | 35.0% | |
| TTGTTCAACTACTCTTGATG+GGG | - | chr3.3:84187043-84187062 | MS.gene38715:intron | 35.0% | |
| TTTCAACAAATAGGTACCCT+GGG | - | chr3.3:84187387-84187406 | MS.gene38715:intron | 35.0% | |
| ! | TACATGGATTTTGTTAGTCC+TGG | - | chr3.3:84187188-84187207 | MS.gene38715:intron | 35.0% |
| !! | ACATTAAAAGTGCTCGTGAA+TGG | - | chr3.3:84187444-84187463 | MS.gene38715:intron | 35.0% |
| !! | ATACCAATTTGGTTTGAAGC+TGG | - | chr3.3:84186979-84186998 | MS.gene38715:intron | 35.0% |
| AAATACGAGTTTGCCAACAC+AGG | - | chr3.3:84187009-84187028 | MS.gene38715:intron | 40.0% | |
| AATACGAGTTTGCCAACACA+GGG | - | chr3.3:84187010-84187029 | MS.gene38715:intron | 40.0% | |
| ACAGGTATGCTGAAACAAGA+AGG | - | chr3.3:84187165-84187184 | MS.gene38715:intron | 40.0% | |
| AGGATCCTGAAAGCTTAAAG+TGG | - | chr3.3:84186544-84186563 | MS.gene38715:intron | 40.0% | |
| ATTGGTAAACCTTCAACAGC+AGG | - | chr3.3:84186247-84186266 | MS.gene38715:CDS | 40.0% | |
| CGTTGTTCAACTACTCTTGA+TGG | - | chr3.3:84187041-84187060 | MS.gene38715:intron | 40.0% | |
| CTTGAAAAGAGAACTAGCAC+TGG | + | chr3.3:84186453-84186472 | None:intergenic | 40.0% | |
| CTTGCAATGGTAGCAATACT+TGG | - | chr3.3:84187581-84187600 | MS.gene38715:CDS | 40.0% | |
| GTGTGTGTTTGTACGGTTAT+CGG | + | chr3.3:84187289-84187308 | None:intergenic | 40.0% | |
| GTTTCAACAAATAGGTACCC+TGG | - | chr3.3:84187386-84187405 | MS.gene38715:intron | 40.0% | |
| GTTTGTACGGTTATCGGAAA+TGG | + | chr3.3:84187283-84187302 | None:intergenic | 40.0% | |
| TACGTTCCATCAAGATAGGT+CGG | + | chr3.3:84186382-84186401 | None:intergenic | 40.0% | |
| TAGAGAATCACAGCCAAACA+TGG | + | chr3.3:84186826-84186845 | None:intergenic | 40.0% | |
| TATCGGAAATGGAAATACCC+TGG | + | chr3.3:84187272-84187291 | None:intergenic | 40.0% | |
| TCAACTCATCAACCAGAAGT+TGG | + | chr3.3:84187090-84187109 | None:intergenic | 40.0% | |
| TGCACAAGTGTGTGTTTGTA+CGG | + | chr3.3:84187296-84187315 | None:intergenic | 40.0% | |
| TGCTCCACAAGGTTATCAAT+TGG | + | chr3.3:84187641-84187660 | None:intergenic | 40.0% | |
| TTAGGAGTCAAAATGCAGAG+AGG | + | chr3.3:84186415-84186434 | None:intergenic | 40.0% | |
| TTCAACAAATAGGTACCCTG+GGG | - | chr3.3:84187388-84187407 | MS.gene38715:intron | 40.0% | |
| TTGGCTGTGATTCTCTATCA+AGG | - | chr3.3:84186829-84186848 | MS.gene38715:intron | 40.0% | |
| TTTGCAATGCTTGGAGTCTT+GGG | - | chr3.3:84186597-84186616 | MS.gene38715:intron | 40.0% | |
| ! | TGCTGAAACAAGAAGGTACA+TGG | - | chr3.3:84187172-84187191 | MS.gene38715:intron | 40.0% |
| ! | TGGACCAATTGATAACCTTG+TGG | - | chr3.3:84187634-84187653 | MS.gene38715:CDS | 40.0% |
| ! | TTAGATCATCGTAGCTTTGC+AGG | + | chr3.3:84186766-84186785 | None:intergenic | 40.0% |
| !! | TGGGGTAGGATTTTAATCAC+TGG | - | chr3.3:84187061-84187080 | MS.gene38715:intron | 40.0% |
| AATCTCCAGGCAGACTGAAA+AGG | + | chr3.3:84186497-84186516 | None:intergenic | 45.0% | |
| ACGTTCCATCAAGATAGGTC+GGG | + | chr3.3:84186381-84186400 | None:intergenic | 45.0% | |
| AGAGGGTTCCTTCTTTGGAT+TGG | - | chr3.3:84187223-84187242 | MS.gene38715:intron | 45.0% | |
| ATGTCTTTAGCTAGGCCAAG+AGG | + | chr3.3:84187428-84187447 | None:intergenic | 45.0% | |
| CAAGCTTCAGTGACTCATGT+TGG | - | chr3.3:84187614-84187633 | MS.gene38715:CDS | 45.0% | |
| CATTCTCGCTTTGCAATGCT+TGG | - | chr3.3:84186588-84186607 | MS.gene38715:intron | 45.0% | |
| CCTGGATCTCAAGCTAAAGA+GGG | - | chr3.3:84187206-84187225 | MS.gene38715:intron | 45.0% | |
| CTTTGCAATGCTTGGAGTCT+TGG | - | chr3.3:84186596-84186615 | MS.gene38715:intron | 45.0% | |
| GATTTGAGAGATGCTCCACA+AGG | + | chr3.3:84187652-84187671 | None:intergenic | 45.0% | |
| GCACCAGCTTCAAACCAAAT+TGG | + | chr3.3:84186985-84187004 | None:intergenic | 45.0% | |
| GCTAAAGAGGGTTCCTTCTT+TGG | - | chr3.3:84187218-84187237 | MS.gene38715:intron | 45.0% | |
| GGCTTACGTTCCATCAAGAT+AGG | + | chr3.3:84186386-84186405 | None:intergenic | 45.0% | |
| TCAACAAATAGGTACCCTGG+GGG | - | chr3.3:84187389-84187408 | MS.gene38715:intron | 45.0% | |
| TCAACTACTCTTGATGGGGT+AGG | - | chr3.3:84187047-84187066 | MS.gene38715:intron | 45.0% | |
| TCCTGGATCTCAAGCTAAAG+AGG | - | chr3.3:84187205-84187224 | MS.gene38715:intron | 45.0% | |
| TGAAGCCTCCAATCCAAAGA+AGG | + | chr3.3:84187234-84187253 | None:intergenic | 45.0% | |
| ! | CAAAATGCAGAGAGGCGTAA+GGG | + | chr3.3:84186407-84186426 | None:intergenic | 45.0% |
| ! | TCAAAATGCAGAGAGGCGTA+AGG | + | chr3.3:84186408-84186427 | None:intergenic | 45.0% |
| ! | TCAGTCTGCCTGGAGATTTT+GGG | - | chr3.3:84186499-84186518 | MS.gene38715:intron | 45.0% |
| ! | TGGAGCATCTCTCAAATCCA+TGG | - | chr3.3:84187654-84187673 | MS.gene38715:CDS | 45.0% |
| ! | TTCAGTCTGCCTGGAGATTT+TGG | - | chr3.3:84186498-84186517 | MS.gene38715:intron | 45.0% |
| ! | TTTGGATTGGAGGCTTCACT+TGG | - | chr3.3:84187236-84187255 | MS.gene38715:intron | 45.0% |
| !! | AATCACTGGCTTCCAACTTC+TGG | - | chr3.3:84187075-84187094 | MS.gene38715:intron | 45.0% |
| AGGCCAAGAGGATTTAGCAG+AGG | + | chr3.3:84187416-84187435 | None:intergenic | 50.0% | |
| CGTTCCATCAAGATAGGTCG+GGG | + | chr3.3:84186380-84186399 | None:intergenic | 50.0% | |
| GATCCTCTCCAAGTCCAAGT+GGG | + | chr3.3:84186530-84186549 | None:intergenic | 50.0% | |
| GGTCCTCTGCTAAATCCTCT+TGG | - | chr3.3:84187410-84187429 | MS.gene38715:intron | 50.0% | |
| GTGGTATGTGCAAGCAGAGT+TGG | - | chr3.3:84186563-84186582 | MS.gene38715:intron | 50.0% | |
| GTTCCATCAAGATAGGTCGG+GGG | + | chr3.3:84186379-84186398 | None:intergenic | 50.0% | |
| TGTTACAGGGCGACTTGCAA+TGG | - | chr3.3:84187568-84187587 | MS.gene38715:CDS | 50.0% | |
| ! | GGGTTCCTTCTTTGGATTGG+AGG | - | chr3.3:84187226-84187245 | MS.gene38715:intron | 50.0% |
| ! | GGTAACCTTTTCAGTCTGCC+TGG | - | chr3.3:84186489-84186508 | MS.gene38715:intron | 50.0% |
| !! | CCCTCTTTAGCTTGAGATCC+AGG | + | chr3.3:84187209-84187228 | None:intergenic | 50.0% |
| !! | GAGGTTGGATTGGCCATGTT+TGG | - | chr3.3:84186810-84186829 | MS.gene38715:intron | 50.0% |
| !!! | GATTTTGGGTTCGACCCACT+TGG | - | chr3.3:84186513-84186532 | MS.gene38715:intron | 50.0% |
| AACGACGAGTGTCCCTGTGT+TGG | + | chr3.3:84187025-84187044 | None:intergenic | 55.0% | |
| CACTTGGAGGCTTAGAGCCA+GGG | - | chr3.3:84187252-84187271 | MS.gene38715:intron | 55.0% | |
| CAGTGGTGTCCTGCTGTTGA+AGG | + | chr3.3:84186259-84186278 | None:intergenic | 55.0% | |
| CTTCAACAGCAGGACACCAC+TGG | - | chr3.3:84186257-84186276 | MS.gene38715:CDS | 55.0% | |
| CTTCGCGTCGCAGGAGTTAA+TGG | - | chr3.3:84186955-84186974 | MS.gene38715:intron | 55.0% | |
| GATCCCCCGACCTATCTTGA+TGG | - | chr3.3:84186373-84186392 | MS.gene38715:intron | 55.0% | |
| GATTTAGCAGAGGACCCCCA+GGG | + | chr3.3:84187406-84187425 | None:intergenic | 55.0% | |
| GGATCCTCTCCAAGTCCAAG+TGG | + | chr3.3:84186531-84186550 | None:intergenic | 55.0% | |
| GGATTGGAGGCTTCACTTGG+AGG | - | chr3.3:84187239-84187258 | MS.gene38715:intron | 55.0% | |
| GGGTCGAACCCAAAATCTCC+AGG | + | chr3.3:84186510-84186529 | None:intergenic | 55.0% | |
| TCACTTGGAGGCTTAGAGCC+AGG | - | chr3.3:84187251-84187270 | MS.gene38715:intron | 55.0% | |
| ATCAAGTCCCGGGAGCCATG+TGG | + | chr3.3:84186356-84186375 | None:intergenic | 60.0% | |
| ATGCAGCTACTTCGCGTCGC+AGG | - | chr3.3:84186946-84186965 | MS.gene38715:intron | 60.0% | |
| CAGCACAACAGCGACCCACA+TGG | - | chr3.3:84186338-84186357 | MS.gene38715:intron | 60.0% | |
| CGACCCACTTGGACTTGGAG+AGG | - | chr3.3:84186524-84186543 | MS.gene38715:intron | 60.0% | |
| GGATTTAGCAGAGGACCCCC+AGG | + | chr3.3:84187407-84187426 | None:intergenic | 60.0% | |
| GGGTTCGACCCACTTGGACT+TGG | - | chr3.3:84186519-84186538 | MS.gene38715:intron | 60.0% | |
| TAGGTCGGGGGATCAAGTCC+CGG | + | chr3.3:84186367-84186386 | None:intergenic | 60.0% | |
| TCAAGTCCCGGGAGCCATGT+GGG | + | chr3.3:84186355-84186374 | None:intergenic | 60.0% | |
| ACAGCGACCCACATGGCTCC+CGG | - | chr3.3:84186345-84186364 | MS.gene38715:intron | 65.0% | |
| ACTCCCGTTCCTGCAGCAGC+AGG | + | chr3.3:84186289-84186308 | None:intergenic | 65.0% | |
| AGGCCTGCTGCTGCAGGAAC+GGG | - | chr3.3:84186283-84186302 | MS.gene38715:CDS | 65.0% | |
| AGGTCGGGGGATCAAGTCCC+GGG | + | chr3.3:84186366-84186385 | None:intergenic | 65.0% | |
| CAGGCCTGCTGCTGCAGGAA+CGG | - | chr3.3:84186282-84186301 | MS.gene38715:CDS | 65.0% | |
| !! | CAGCAGGACACCACTGGCTC+AGG | - | chr3.3:84186263-84186282 | MS.gene38715:CDS | 65.0% |
| CAGCAGCAGGCCTGAGCCAG+TGG | + | chr3.3:84186276-84186295 | None:intergenic | 70.0% | |
| CAGCGACCCACATGGCTCCC+GGG | - | chr3.3:84186346-84186365 | MS.gene38715:intron | 70.0% | |
| TGGCTCAGGCCTGCTGCTGC+AGG | - | chr3.3:84186277-84186296 | MS.gene38715:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 84186178 | 84187718 | 84186178 | ID=MS.gene38715 |
| chr3.3 | mRNA | 84186178 | 84187718 | 84186178 | ID=MS.gene38715.t1;Parent=MS.gene38715 |
| chr3.3 | exon | 84187498 | 84187718 | 84187498 | ID=MS.gene38715.t1.exon1;Parent=MS.gene38715.t1 |
| chr3.3 | CDS | 84187498 | 84187718 | 84187498 | ID=cds.MS.gene38715.t1;Parent=MS.gene38715.t1 |
| chr3.3 | exon | 84187261 | 84187393 | 84187261 | ID=MS.gene38715.t1.exon2;Parent=MS.gene38715.t1 |
| chr3.3 | CDS | 84187261 | 84187393 | 84187261 | ID=cds.MS.gene38715.t1;Parent=MS.gene38715.t1 |
| chr3.3 | exon | 84186832 | 84186944 | 84186832 | ID=MS.gene38715.t1.exon3;Parent=MS.gene38715.t1 |
| chr3.3 | CDS | 84186832 | 84186944 | 84186832 | ID=cds.MS.gene38715.t1;Parent=MS.gene38715.t1 |
| chr3.3 | exon | 84186623 | 84186727 | 84186623 | ID=MS.gene38715.t1.exon4;Parent=MS.gene38715.t1 |
| chr3.3 | CDS | 84186623 | 84186727 | 84186623 | ID=cds.MS.gene38715.t1;Parent=MS.gene38715.t1 |
| chr3.3 | exon | 84186408 | 84186496 | 84186408 | ID=MS.gene38715.t1.exon5;Parent=MS.gene38715.t1 |
| chr3.3 | CDS | 84186408 | 84186496 | 84186408 | ID=cds.MS.gene38715.t1;Parent=MS.gene38715.t1 |
| chr3.3 | exon | 84186178 | 84186320 | 84186178 | ID=MS.gene38715.t1.exon6;Parent=MS.gene38715.t1 |
| chr3.3 | CDS | 84186178 | 84186320 | 84186178 | ID=cds.MS.gene38715.t1;Parent=MS.gene38715.t1 |
| Gene Sequence |
| Protein sequence |
