AlfalfaGEDB | MS.gene27164

M. sativa cultivar XinJiangDaYe / MS.gene27164

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene27164.t1	RHN51642.1	91.7	553	46	0	1	553	1	553	6.80E-204	720.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene27164.t1	A8MQR0	47.8	542	262	8	12	551	11	533	9.7e-66	252.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene27164.t1	A0A396HE81	91.7	553	46	0	1	553	1	553	4.9e-204	720.3

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049378	MS.gene27164	0.81765	2.95E-52	-1.69E-46
MS.gene049435	MS.gene27164	0.820068	8.34E-53	-1.69E-46
MS.gene050226	MS.gene27164	0.839236	1.79E-57	-1.69E-46
MS.gene050227	MS.gene27164	0.824534	7.66E-54	-1.69E-46
MS.gene050228	MS.gene27164	0.830874	2.30E-55	-1.69E-46
MS.gene050442	MS.gene27164	0.851096	1.11E-60	-1.69E-46
MS.gene050787	MS.gene27164	0.819753	9.84E-53	-1.69E-46
MS.gene051147	MS.gene27164	0.836519	8.92E-57	-1.69E-46
MS.gene051568	MS.gene27164	0.845912	3.02E-59	-1.69E-46
MS.gene052333	MS.gene27164	0.822639	2.13E-53	-1.69E-46
MS.gene052389	MS.gene27164	0.812788	3.56E-51	-1.69E-46
MS.gene053147	MS.gene27164	0.819357	1.21E-52	-1.69E-46
MS.gene054291	MS.gene27164	-0.816945	4.26E-52	-1.69E-46
MS.gene054379	MS.gene27164	0.811249	7.69E-51	-1.69E-46
MS.gene054467	MS.gene27164	0.826207	3.08E-54	-1.69E-46
MS.gene054468	MS.gene27164	0.862116	6.36E-64	-1.69E-46
MS.gene054581	MS.gene27164	0.81664	4.98E-52	-1.69E-46
MS.gene054930	MS.gene27164	0.811017	8.64E-51	-1.69E-46
MS.gene055701	MS.gene27164	0.804498	2.10E-49	-1.69E-46
MS.gene05595	MS.gene27164	0.803608	3.21E-49	-1.69E-46
MS.gene057194	MS.gene27164	0.800604	1.33E-48	-1.69E-46
MS.gene057469	MS.gene27164	0.832213	1.07E-55	-1.69E-46
MS.gene05761	MS.gene27164	0.81822	2.20E-52	-1.69E-46
MS.gene057929	MS.gene27164	0.801048	1.08E-48	-1.69E-46
MS.gene059664	MS.gene27164	0.803652	3.15E-49	-1.69E-46
MS.gene060011	MS.gene27164	0.807482	4.95E-50	-1.69E-46
MS.gene060137	MS.gene27164	-0.809952	1.47E-50	-1.69E-46
MS.gene06052	MS.gene27164	0.8433	1.53E-58	-1.69E-46
MS.gene060802	MS.gene27164	0.819577	1.08E-52	-1.69E-46
MS.gene060998	MS.gene27164	0.805948	1.04E-49	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene91080	MS.gene27164	PPI
MS.gene024366	MS.gene27164	PPI
MS.gene029347	MS.gene27164	PPI
MS.gene025832	MS.gene27164	PPI
MS.gene29262	MS.gene27164	PPI
MS.gene026206	MS.gene27164	PPI
MS.gene003842	MS.gene27164	PPI
MS.gene45459	MS.gene27164	PPI
MS.gene27164	MS.gene22770	PPI
MS.gene76253	MS.gene27164	PPI
MS.gene065077	MS.gene27164	PPI
MS.gene88573	MS.gene27164	PPI
MS.gene050727	MS.gene27164	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene27164.t1	MTR_3g086660	39.863	582	314	11	1	552	1	576	3.14e-105	328
MS.gene27164.t1	MTR_7g017690	37.341	549	300	11	15	549	9	527	7.79e-88	284

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene27164.t1	AT1G68910	47.628	527	258	7	28	552	24	534	6.92e-139	415
MS.gene27164.t1	AT1G68910	47.628	527	258	7	28	552	24	534	6.92e-139	415
MS.gene27164.t1	AT1G68910	47.628	527	258	7	28	552	24	534	3.75e-138	414
MS.gene27164.t1	AT5G11390	40.760	579	293	10	15	549	25	597	1.09e-103	327

Find 72 sgRNAs with CRISPR-Local

Find 88 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GCAATTACAACAACAGTTAT+TGG	0.208222	6.2:-51466454	MS.gene27164:CDS
TTCTACCATTCTCTGATCTT+TGG	0.221608	6.2:+51466205	None:intergenic
GAAGAGCTGAACTTTCTTAA+AGG	0.224825	6.2:-51465564	MS.gene27164:CDS
CAATGCTACCGAGGTGTTAA+TGG	0.262222	6.2:-51466000	MS.gene27164:CDS
AACAAAGTTTATCATGGATT+TGG	0.269879	6.2:-51465190	MS.gene27164:CDS
ATATGTTATACACAGCAATT+TGG	0.281088	6.2:-51465428	MS.gene27164:CDS
TGTTCTGTATATTTATCTAT+TGG	0.302396	6.2:-51466727	MS.gene27164:CDS
ATACACAGCAATTTGGGATA+TGG	0.307575	6.2:-51465421	MS.gene27164:CDS
GGGGATTTCGAAAAGTATAA+TGG	0.309555	6.2:-51465979	MS.gene27164:CDS
AAGAAGCAGCAGAAGTTGTT+TGG	0.325223	6.2:-51466043	MS.gene27164:CDS
ATCCATGATAAACTTTGTTC+TGG	0.336896	6.2:+51465194	None:intergenic
TACTGAGGTGTTGGATTTGA+GGG	0.336994	6.2:-51465796	MS.gene27164:CDS
ATTCATATACACAGGGGAAA+TGG	0.346219	6.2:-51466282	MS.gene27164:intron
CCGATGATCTATTTCTGTTA+AGG	0.349046	6.2:+51466785	None:intergenic
AGAAGCAGCAGAAGTTGTTT+GGG	0.356426	6.2:-51466042	MS.gene27164:CDS
TTCATATACACAGGGGAAAT+GGG	0.379165	6.2:-51466281	MS.gene27164:intron
AATGCTACCGAGGTGTTAAT+GGG	0.379167	6.2:-51465999	MS.gene27164:CDS
AAGAGCTGAACTTTCTTAAA+GGG	0.392409	6.2:-51465563	MS.gene27164:CDS
TATGTTATACACAGCAATTT+GGG	0.393418	6.2:-51465427	MS.gene27164:CDS
ATGCCTTCGCATTCTGTAGT+TGG	0.418735	6.2:+51465478	None:intergenic
GGGATTTCGAAAAGTATAAT+GGG	0.426529	6.2:-51465978	MS.gene27164:CDS
TTCTATAAGTTGTTCATGAC+AGG	0.427731	6.2:+51465698	None:intergenic
TACCAGAACAAAGTTTATCA+TGG	0.428221	6.2:-51465196	MS.gene27164:CDS
TAATTGCTTCTTAGACTCTT+CGG	0.428486	6.2:+51466470	None:intergenic
ATGCAAGTTCACCAGCTTCT+CGG	0.428648	6.2:+51466749	None:intergenic
TGAGGTTGAACTCAGTTACT+TGG	0.431369	6.2:+51465949	None:intergenic
AAGGGAGCGCATTAATAAAC+AGG	0.433397	6.2:-51465148	MS.gene27164:CDS
ATGCTGCTTTAGAGAAGAAC+GGG	0.446606	6.2:-51465854	MS.gene27164:CDS
ATACTGAGGTGTTGGATTTG+AGG	0.449553	6.2:-51465797	MS.gene27164:CDS
CACCAGCTTCTCGGAAGAAT+AGG	0.454696	6.2:+51466758	None:intergenic
AACAGAGCTTGACAATTTCA+TGG	0.456939	6.2:-51466592	MS.gene27164:CDS
ATGATGTTTGATCTGTTGTC+TGG	0.458775	6.2:-51466633	MS.gene27164:CDS
GCAAGGATATATCAAGATCT+TGG	0.461436	6.2:+51466811	None:intergenic
TATTTCTGTTAAGGCTTGCA+AGG	0.481548	6.2:+51466794	None:intergenic
AGCCTATTCTTCCGAGAAGC+TGG	0.487690	6.2:-51466760	MS.gene27164:CDS
TCAACTTACAATTCTCATGT+TGG	0.490472	6.2:+51466385	None:intergenic
TCAGGAAAATACTGAGGTGT+TGG	0.490567	6.2:-51465805	MS.gene27164:CDS
CTCGCTGCATATAACCGTTG+AGG	0.524764	6.2:+51465931	None:intergenic
TCTTGAACTTCATAAAGAGT+TGG	0.526105	6.2:-51465304	MS.gene27164:CDS
TGCTTGAGAAGTCGCTCGCA+AGG	0.526338	6.2:-51466160	MS.gene27164:CDS
GGTGTTGGATTTGAGGGAAA+AGG	0.526687	6.2:-51465790	MS.gene27164:CDS
GCGAAGGCATCTTCTGAAGC+AGG	0.527456	6.2:-51465465	MS.gene27164:CDS
GCTTTGCATGAAAACATCGT+TGG	0.534705	6.2:-51465262	MS.gene27164:CDS
AATTGAAGAGCTAAAATCCA+AGG	0.539062	6.2:-51465391	MS.gene27164:CDS
CTTAGAAAACTCATTTGAGA+AGG	0.549658	6.2:-51466658	MS.gene27164:CDS
AGCTGAGAGTGCTGAAGCAA+AGG	0.555426	6.2:-51465622	MS.gene27164:CDS
AGATCTTGAAAAGAAGTTAG+CGG	0.557654	6.2:-51466132	MS.gene27164:CDS
TGTTAATGTTGACGATACTC+AGG	0.562953	6.2:-51465823	MS.gene27164:CDS
GAAAACCAAAGATCAGAGAA+TGG	0.567239	6.2:-51466210	MS.gene27164:CDS
TAATGCAACTAGCTTCTGAA+AGG	0.576099	6.2:-51465167	MS.gene27164:CDS
CGAAATCCCCATTAACACCT+CGG	0.586371	6.2:+51465992	None:intergenic
ATACACAGGGGAAATGGGGA+AGG	0.589178	6.2:-51466276	MS.gene27164:intron
ACCTCAGTCAAATGTCTGCA+CGG	0.591663	6.2:+51466525	None:intergenic
TCCAAGGTTTCAAAAGCTGA+AGG	0.594552	6.2:-51465375	MS.gene27164:CDS
ACTCCGCTACACTGAACAAG+TGG	0.600856	6.2:-51466078	MS.gene27164:CDS
AATGCAACTAGCTTCTGAAA+GGG	0.600990	6.2:-51465166	MS.gene27164:CDS
GAAGCAGCAGAAGTTGTTTG+GGG	0.601416	6.2:-51466041	MS.gene27164:CDS
ACAGTTAACTGAAACGAACA+TGG	0.602578	6.2:-51465595	MS.gene27164:CDS
GCAGCTTCAGAAAAGTCTTG+TGG	0.605005	6.2:-51466412	MS.gene27164:CDS
TCATATACACAGGGGAAATG+GGG	0.609571	6.2:-51466280	MS.gene27164:intron
GATGCTGCTTTAGAGAAGAA+CGG	0.611153	6.2:-51465855	MS.gene27164:CDS
ATGCCACTTGTTCAGTGTAG+CGG	0.624346	6.2:+51466075	None:intergenic
GTAACTGAGTTCAACCTCAA+CGG	0.629441	6.2:-51465945	MS.gene27164:CDS
CCTTAACAGAAATAGATCAT+CGG	0.629560	6.2:-51466785	MS.gene27164:CDS
GTTTGCTTGAGAAGCAACTG+AGG	0.629664	6.2:-51465512	MS.gene27164:CDS
TTTGCTTGAGAAGCAACTGA+GGG	0.642908	6.2:-51465511	MS.gene27164:CDS
GCTTGAGAAGTCGCTCGCAA+GGG	0.645249	6.2:-51466159	MS.gene27164:CDS
TATCCAACTACAGAATGCGA+AGG	0.657458	6.2:-51465481	MS.gene27164:CDS
ATGCTACCGAGGTGTTAATG+GGG	0.669958	6.2:-51465998	MS.gene27164:CDS
TGAAGCAGACAATGCTACCG+AGG	0.684617	6.2:-51466009	MS.gene27164:CDS
GCCGTGCAGACATTTGACTG+AGG	0.706871	6.2:-51466526	MS.gene27164:CDS
CGATACTCAGGAAAATACTG+AGG	0.718119	6.2:-51465811	MS.gene27164:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TGTTCTGTATATTTATCTAT+TGG	-	chr6.2:51465268-51465287	MS.gene27164:CDS	20.0%
!!!	AATTTTAATCGAACAACTTA+AGG	-	chr6.2:51466112-51466131	MS.gene27164:CDS	20.0%
!!!	ATGAAGTTCAAGATTATTTT+CGG	+	chr6.2:51466684-51466703	None:intergenic	20.0%
!	AACAAAGTTTATCATGGATT+TGG	-	chr6.2:51466805-51466824	MS.gene27164:CDS	25.0%
!	ATATGTTATACACAGCAATT+TGG	-	chr6.2:51466567-51466586	MS.gene27164:CDS	25.0%
!	TATGTTATACACAGCAATTT+GGG	-	chr6.2:51466568-51466587	MS.gene27164:CDS	25.0%
!	TTTAGTCATTCATATACACA+GGG	-	chr6.2:51465706-51465725	MS.gene27164:CDS	25.0%
!!	TTTTAGTCATTCATATACAC+AGG	-	chr6.2:51465705-51465724	MS.gene27164:CDS	25.0%
!!!	AATGCTTTCTTTTAGAGATT+CGG	+	chr6.2:51466336-51466355	None:intergenic	25.0%
	AAGAGCTGAACTTTCTTAAA+GGG	-	chr6.2:51466432-51466451	MS.gene27164:CDS	30.0%
	AATTGAAGAGCTAAAATCCA+AGG	-	chr6.2:51466604-51466623	MS.gene27164:CDS	30.0%
	AGATCTTGAAAAGAAGTTAG+CGG	-	chr6.2:51465863-51465882	MS.gene27164:CDS	30.0%
	ATCCATGATAAACTTTGTTC+TGG	+	chr6.2:51466804-51466823	None:intergenic	30.0%
	CCTTAACAGAAATAGATCAT+CGG	-	chr6.2:51465210-51465229	MS.gene27164:CDS	30.0%
	CTTAGAAAACTCATTTGAGA+AGG	-	chr6.2:51465337-51465356	MS.gene27164:CDS	30.0%
	GCAATTACAACAACAGTTAT+TGG	-	chr6.2:51465541-51465560	MS.gene27164:CDS	30.0%
	TAATTGCTTCTTAGACTCTT+CGG	+	chr6.2:51465528-51465547	None:intergenic	30.0%
	TACCAGAACAAAGTTTATCA+TGG	-	chr6.2:51466799-51466818	MS.gene27164:CDS	30.0%
	TCAACTTACAATTCTCATGT+TGG	+	chr6.2:51465613-51465632	None:intergenic	30.0%
	TCTTGAACTTCATAAAGAGT+TGG	-	chr6.2:51466691-51466710	MS.gene27164:CDS	30.0%
	TTAGTCATTCATATACACAG+GGG	-	chr6.2:51465707-51465726	MS.gene27164:CDS	30.0%
	TTCTATAAGTTGTTCATGAC+AGG	+	chr6.2:51466300-51466319	None:intergenic	30.0%
!	AGAAGAACGAAAGAATTTTG+AGG	-	chr6.2:51466241-51466260	MS.gene27164:CDS	30.0%
!	GACTGAGGTTTTCTTTATAA+TGG	-	chr6.2:51465484-51465503	MS.gene27164:CDS	30.0%
!	GGGATTTCGAAAAGTATAAT+GGG	-	chr6.2:51466017-51466036	MS.gene27164:CDS	30.0%
!	TGAACAAGTGGCATTTTATA+TGG	-	chr6.2:51465929-51465948	MS.gene27164:CDS	30.0%
	AACAGAGCTTGACAATTTCA+TGG	-	chr6.2:51465403-51465422	MS.gene27164:CDS	35.0%
	ACAGTTAACTGAAACGAACA+TGG	-	chr6.2:51466400-51466419	MS.gene27164:CDS	35.0%
	AGAAAAACTCTACTCACTCA+AGG	-	chr6.2:51465136-51465155	MS.gene27164:CDS	35.0%
	ATGATGTTTGATCTGTTGTC+TGG	-	chr6.2:51465362-51465381	MS.gene27164:CDS	35.0%
	ATTCATATACACAGGGGAAA+TGG	-	chr6.2:51465713-51465732	MS.gene27164:CDS	35.0%
	GAAAAACTCTACTCACTCAA+GGG	-	chr6.2:51465137-51465156	MS.gene27164:CDS	35.0%
	GAAAACCAAAGATCAGAGAA+TGG	-	chr6.2:51465785-51465804	MS.gene27164:CDS	35.0%
	GAAGAGCTGAACTTTCTTAA+AGG	-	chr6.2:51466431-51466450	MS.gene27164:CDS	35.0%
	GCAAGGATATATCAAGATCT+TGG	+	chr6.2:51465187-51465206	None:intergenic	35.0%
	TGTTAATGTTGACGATACTC+AGG	-	chr6.2:51466172-51466191	MS.gene27164:CDS	35.0%
	TTCATATACACAGGGGAAAT+GGG	-	chr6.2:51465714-51465733	MS.gene27164:CDS	35.0%
	TTCTACCATTCTCTGATCTT+TGG	+	chr6.2:51465793-51465812	None:intergenic	35.0%
!	AAATGAGTTTTCTAAGTCGC+AGG	+	chr6.2:51465333-51465352	None:intergenic	35.0%
!	AATGCAACTAGCTTCTGAAA+GGG	-	chr6.2:51466829-51466848	MS.gene27164:CDS	35.0%
!	ATACACAGCAATTTGGGATA+TGG	-	chr6.2:51466574-51466593	MS.gene27164:CDS	35.0%
!	GGGGATTTCGAAAAGTATAA+TGG	-	chr6.2:51466016-51466035	MS.gene27164:CDS	35.0%
!	GTCTGGCATTTTAGATTTTG+AGG	-	chr6.2:51465379-51465398	MS.gene27164:CDS	35.0%
!	TAATGCAACTAGCTTCTGAA+AGG	-	chr6.2:51466828-51466847	MS.gene27164:CDS	35.0%
!	TATTTCTGTTAAGGCTTGCA+AGG	+	chr6.2:51465204-51465223	None:intergenic	35.0%
!!	CCGATGATCTATTTCTGTTA+AGG	+	chr6.2:51465213-51465232	None:intergenic	35.0%
!!!	AAGCAAACCGACTTTTTTCT+CGG	+	chr6.2:51466471-51466490	None:intergenic	35.0%
	AAGAAGCAGCAGAAGTTGTT+TGG	-	chr6.2:51465952-51465971	MS.gene27164:CDS	40.0%
	AGAAGCAGCAGAAGTTGTTT+GGG	-	chr6.2:51465953-51465972	MS.gene27164:CDS	40.0%
	AGTACTGCCGAGAAAAAAGT+CGG	-	chr6.2:51466461-51466480	MS.gene27164:CDS	40.0%
	CGATACTCAGGAAAATACTG+AGG	-	chr6.2:51466184-51466203	MS.gene27164:CDS	40.0%
	GCTTTGCATGAAAACATCGT+TGG	-	chr6.2:51466733-51466752	MS.gene27164:CDS	40.0%
	GTAACTGAGTTCAACCTCAA+CGG	-	chr6.2:51466050-51466069	MS.gene27164:CDS	40.0%
	TATCCAACTACAGAATGCGA+AGG	-	chr6.2:51466514-51466533	MS.gene27164:CDS	40.0%
	TCAGGAAAATACTGAGGTGT+TGG	-	chr6.2:51466190-51466209	MS.gene27164:CDS	40.0%
	TCATATACACAGGGGAAATG+GGG	-	chr6.2:51465715-51465734	MS.gene27164:CDS	40.0%
	TCCAAGGTTTCAAAAGCTGA+AGG	-	chr6.2:51466620-51466639	MS.gene27164:CDS	40.0%
	TGAGGTTGAACTCAGTTACT+TGG	+	chr6.2:51466049-51466068	None:intergenic	40.0%
	TTTGCTTGAGAAGCAACTGA+GGG	-	chr6.2:51466484-51466503	MS.gene27164:CDS	40.0%
!	AAGGGAGCGCATTAATAAAC+AGG	-	chr6.2:51466847-51466866	MS.gene27164:CDS	40.0%
!	AATGCTACCGAGGTGTTAAT+GGG	-	chr6.2:51465996-51466015	MS.gene27164:CDS	40.0%
!!	ATACTGAGGTGTTGGATTTG+AGG	-	chr6.2:51466198-51466217	MS.gene27164:CDS	40.0%
!!	ATGCTGCTTTAGAGAAGAAC+GGG	-	chr6.2:51466141-51466160	MS.gene27164:CDS	40.0%
!!	GATGCTGCTTTAGAGAAGAA+CGG	-	chr6.2:51466140-51466159	MS.gene27164:CDS	40.0%
!!	TACTGAGGTGTTGGATTTGA+GGG	-	chr6.2:51466199-51466218	MS.gene27164:CDS	40.0%
!!!	ACCTTCAGCTTTTGAAACCT+TGG	+	chr6.2:51466624-51466643	None:intergenic	40.0%
	ACCTCAGTCAAATGTCTGCA+CGG	+	chr6.2:51465473-51465492	None:intergenic	45.0%
	ATGCAAGTTCACCAGCTTCT+CGG	+	chr6.2:51465249-51465268	None:intergenic	45.0%
	ATGCCTTCGCATTCTGTAGT+TGG	+	chr6.2:51466520-51466539	None:intergenic	45.0%
	CGAAATCCCCATTAACACCT+CGG	+	chr6.2:51466006-51466025	None:intergenic	45.0%
	GAAGCAGCAGAAGTTGTTTG+GGG	-	chr6.2:51465954-51465973	MS.gene27164:CDS	45.0%
	GCAGCTTCAGAAAAGTCTTG+TGG	-	chr6.2:51465583-51465602	MS.gene27164:CDS	45.0%
	GTTTGCTTGAGAAGCAACTG+AGG	-	chr6.2:51466483-51466502	MS.gene27164:CDS	45.0%
!	ATGCCACTTGTTCAGTGTAG+CGG	+	chr6.2:51465923-51465942	None:intergenic	45.0%
!	ATGCTACCGAGGTGTTAATG+GGG	-	chr6.2:51465997-51466016	MS.gene27164:CDS	45.0%
!	CAATGCTACCGAGGTGTTAA+TGG	-	chr6.2:51465995-51466014	MS.gene27164:CDS	45.0%
!	GGTGTTGGATTTGAGGGAAA+AGG	-	chr6.2:51466205-51466224	MS.gene27164:CDS	45.0%
	ACTCCGCTACACTGAACAAG+TGG	-	chr6.2:51465917-51465936	MS.gene27164:CDS	50.0%
	AGCCTATTCTTCCGAGAAGC+TGG	-	chr6.2:51465235-51465254	MS.gene27164:CDS	50.0%
	ATACACAGGGGAAATGGGGA+AGG	-	chr6.2:51465719-51465738	MS.gene27164:CDS	50.0%
	CACCAGCTTCTCGGAAGAAT+AGG	+	chr6.2:51465240-51465259	None:intergenic	50.0%
	CTCGCTGCATATAACCGTTG+AGG	+	chr6.2:51466067-51466086	None:intergenic	50.0%
	TGAAGCAGACAATGCTACCG+AGG	-	chr6.2:51465986-51466005	MS.gene27164:CDS	50.0%
!!	AGCTGAGAGTGCTGAAGCAA+AGG	-	chr6.2:51466373-51466392	MS.gene27164:intron	50.0%
	GCCGTGCAGACATTTGACTG+AGG	-	chr6.2:51465469-51465488	MS.gene27164:CDS	55.0%
	GCTTGAGAAGTCGCTCGCAA+GGG	-	chr6.2:51465836-51465855	MS.gene27164:CDS	55.0%
	TGCTTGAGAAGTCGCTCGCA+AGG	-	chr6.2:51465835-51465854	MS.gene27164:CDS	55.0%
!!	GCGAAGGCATCTTCTGAAGC+AGG	-	chr6.2:51466530-51466549	MS.gene27164:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr6.2	gene	51465122	51466895	51465122	ID=MS.gene27164
chr6.2	mRNA	51465122	51466895	51465122	ID=MS.gene27164.t1;Parent=MS.gene27164
chr6.2	exon	51466394	51466895	51466394	ID=MS.gene27164.t1.exon1;Parent=MS.gene27164.t1
chr6.2	CDS	51466394	51466895	51466394	ID=cds.MS.gene27164.t1;Parent=MS.gene27164.t1
chr6.2	exon	51465122	51466290	51465122	ID=MS.gene27164.t1.exon2;Parent=MS.gene27164.t1
chr6.2	CDS	51465122	51466290	51465122	ID=cds.MS.gene27164.t1;Parent=MS.gene27164.t1

Gene Sequence

>MS.gene27164

ATGGATGCAGCTTTAGAAAAACTCTACTCACTCAAGGGTTTCTCAACAAAAGAAAACGACATCCAAGATCTTGATATATCCTTGCAAGCCTTAACAGAAATAGATCATCGGCTAGCCTATTCTTCCGAGAAGCTGGTGAACTTGCATGTTCTGTATATTTATCTATTGGCTCGAGAAAACGATCTTGAAGAAATAGATTCAAAGAATACCTGCGACTTAGAAAACTCATTTGAGAAGGCAATGATGTTTGATCTGTTGTCTGGCATTTTAGATTTTGAGGCAACAGAGCTTGACAATTTCATGGACACTCTACATGAAGAAATTGTCGATGCTCGTCATAAAATATTGCCGTGCAGACATTTGACTGAGGTTTTCTTTATAATGGATGAAAAATTGCAAGATTCCGAAGAGTCTAAGAAGCAATTACAACAACAGTTATTGGAGTTAAAGATTCAGTCATCGCAGCTTCAGAAAAGTCTTGTGGCTTTCCAACATGAGAATTGTAAGTTGAAATATTACACAGATTTTTCTCTTTTTTTTTTCTGAAAAATTTACGTTGAGTTATTTTTCATTTATTTATCGTTTTTAGTCATTCATATACACAGGGGAAATGGGGAAGGCTTTAAGTTTATCAGAAAATAGTCATGTGTCAAATGTGAAAGTGAAAACCAAAGATCAGAGAATGGTAGAACAACAGAGATATATTCTTCGAATGCTTGAGAAGTCGCTCGCAAGGGAGCTAGATCTTGAAAAGAAGTTAGCGGAGTCAAGAAATAACGAAGAACTAAAGTTGAAACTCCGCTACACTGAACAAGTGGCATTTTATATGGAAGAAGCAGCAGAAGTTGTTTGGGGAAGATTTCTTGAAGCAGACAATGCTACCGAGGTGTTAATGGGGATTTCGAAAAGTATAATGGGACGTCTCCAAGTAACTGAGTTCAACCTCAACGGTTATATGCAGCGAGAAAATGAGCTAAAATTGAATATTCAAATTTTAATCGAACAACTTAAGGCTAAAGATGCTGCTTTAGAGAAGAACGGGAGATGTAATGTTAATGTTGACGATACTCAGGAAAATACTGAGGTGTTGGATTTGAGGGAAAAGGTGAAAATTCTAGAAGAAGAACGAAAGAATTTTGAGGTTCAGATAAATTCTTTGAGTGAAGAGAATGAAGCCTGTCATGAACAACTTATAGAAATAGAAAATTTTGCCGAATCTCTAAAAGAAAGCATTGATATAGCAGAAAATCGAGCTGAGAGTGCTGAAGCAAAGGTTACACAGTTAACTGAAACGAACATGGAACTTACTGAAGAGCTGAACTTTCTTAAAGGGAGTGCTAGTACTGCCGAGAAAAAAGTCGGTTTGCTTGAGAAGCAACTGAGGGAGCTAGATATCCAACTACAGAATGCGAAGGCATCTTCTGAAGCAGGTCAAGAACAGCAGAATATGTTATACACAGCAATTTGGGATATGGAAATATTAATTGAAGAGCTAAAATCCAAGGTTTCAAAAGCTGAAGGTAATAAAGATAGTGCTGAAGAACAATGCATTATGCTATCCGAAAATAATCTTGAACTTCATAAAGAGTTGGATCTCTTCAAGTCGAGAATGCTTTGCATGAAAACATCGTTGGATCACGCTAGCAGTACAAAATTATCAAGTGCAAAAGAAATTGATACCAGAACAAAGTTTATCATGGATTTGGTAATGCAACTAGCTTCTGAAAGGGAGCGCATTAATAAACAGGTATTTACGTTTAAACTCGTCAAATAA

Protein sequence

>MS.gene27164.t1

MDAALEKLYSLKGFSTKENDIQDLDISLQALTEIDHRLAYSSEKLVNLHVLYIYLLARENDLEEIDSKNTCDLENSFEKAMMFDLLSGILDFEATELDNFMDTLHEEIVDARHKILPCRHLTEVFFIMDEKLQDSEESKKQLQQQLLELKIQSSQLQKSLVAFQHENWEMGKALSLSENSHVSNVKVKTKDQRMVEQQRYILRMLEKSLARELDLEKKLAESRNNEELKLKLRYTEQVAFYMEEAAEVVWGRFLEADNATEVLMGISKSIMGRLQVTEFNLNGYMQRENELKLNIQILIEQLKAKDAALEKNGRCNVNVDDTQENTEVLDLREKVKILEEERKNFEVQINSLSEENEACHEQLIEIENFAESLKESIDIAENRAESAEAKVTQLTETNMELTEELNFLKGSASTAEKKVGLLEKQLRELDIQLQNAKASSEAGQEQQNMLYTAIWDMEILIEELKSKVSKAEGNKDSAEEQCIMLSENNLELHKELDLFKSRMLCMKTSLDHASSTKLSSAKEIDTRTKFIMDLVMQLASERERINKQVFTFKLVK