AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene026523

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene026523.t1 MTR_1g032490 85.356 478 21 2 1 429 1 478 0.0 783
MS.gene026523.t1 MTR_1g107315 77.186 469 60 1 1 422 1 469 0.0 707
MS.gene026523.t1 MTR_3g049970 75.106 470 69 2 1 422 1 470 0.0 698
MS.gene026523.t1 MTR_1g107350 73.629 474 78 1 1 427 1 474 0.0 697
MS.gene026523.t1 MTR_8g064870 67.091 471 102 4 3 422 6 474 0.0 616
MS.gene026523.t1 MTR_8g064880 67.017 476 103 4 1 422 1 476 0.0 599
MS.gene026523.t1 MTR_1g107360 61.752 468 124 2 3 423 4 463 0.0 559
MS.gene026523.t1 MTR_1g107365 62.208 471 111 7 3 423 40 493 0.0 557
MS.gene026523.t1 MTR_1g107285 61.311 473 125 6 1 423 1 465 0.0 553
MS.gene026523.t1 MTR_1g107375 61.474 475 115 8 1 425 1 457 0.0 539
MS.gene026523.t1 MTR_1g107325 57.176 425 109 7 1 423 1 354 4.65e-156 446
MS.gene026523.t1 MTR_1g107340 64.400 250 88 1 1 249 1 250 7.33e-106 314
MS.gene026523.t1 MTR_1g107380 35.084 476 239 12 4 421 9 472 1.13e-74 241
MS.gene026523.t1 MTR_5g004940 33.099 426 212 7 8 423 17 379 1.30e-69 226
MS.gene026523.t1 MTR_4g095008 32.839 472 249 14 4 421 7 464 1.54e-67 224
MS.gene026523.t1 MTR_6g038200 30.454 463 248 10 8 418 11 451 1.37e-64 214
MS.gene026523.t1 MTR_3g084520 32.305 486 250 13 8 427 6 478 1.67e-64 214
MS.gene026523.t1 MTR_6g038230 31.398 465 241 12 8 418 11 451 1.45e-63 211
MS.gene026523.t1 MTR_6g038240 30.937 459 257 10 8 421 11 454 2.83e-63 211
MS.gene026523.t1 MTR_5g035580 31.906 467 251 12 7 426 12 458 8.41e-63 210
MS.gene026523.t1 MTR_8g088560 30.323 465 262 12 7 423 9 459 7.36e-62 207
MS.gene026523.t1 MTR_6g038220 30.213 470 249 11 8 423 11 455 7.60e-62 207
MS.gene026523.t1 MTR_7g080950 32.251 462 247 12 7 421 5 447 7.82e-62 207
MS.gene026523.t1 MTR_5g035560 30.687 466 248 10 7 421 10 451 4.88e-60 203
MS.gene026523.t1 MTR_3g084540 31.818 484 250 13 8 424 6 476 8.60e-60 202
MS.gene026523.t1 MTR_3g084530 31.893 486 240 15 8 421 6 472 8.79e-60 202
MS.gene026523.t1 MTR_6g038300 29.783 460 262 9 8 421 11 455 4.03e-59 200
MS.gene026523.t1 MTR_7g080940 30.043 466 252 10 7 421 10 452 5.01e-59 199
MS.gene026523.t1 MTR_8g083290 30.515 485 245 16 6 421 2 463 1.63e-58 198
MS.gene026523.t1 MTR_7g080935 30.621 467 248 10 7 421 10 452 1.71e-57 196
MS.gene026523.t1 MTR_8g083280 29.915 468 259 12 9 421 8 461 2.52e-57 196
MS.gene026523.t1 MTR_4g094920 32.415 472 251 12 4 421 22 479 3.22e-56 193
MS.gene026523.t1 MTR_5g016480 29.769 477 272 11 1 421 1 470 1.03e-55 191
MS.gene026523.t1 MTR_7g080900 28.358 469 272 11 3 424 7 458 3.26e-49 174
MS.gene026523.t1 MTR_2g008210 28.484 488 264 16 2 421 6 476 3.71e-48 171
MS.gene026523.t1 MTR_5g464810 28.131 487 266 15 3 421 7 477 1.35e-47 170
MS.gene026523.t1 MTR_5g064240 28.131 487 266 15 3 421 7 477 1.35e-47 170
MS.gene026523.t1 MTR_3g479490 26.186 485 272 14 7 421 5 473 7.74e-43 157
MS.gene026523.t1 MTR_3g079480 25.971 489 278 14 2 421 15 488 9.51e-42 154
MS.gene026523.t1 MTR_6g014250 25.673 483 275 14 8 421 10 477 2.83e-41 153
MS.gene026523.t1 MTR_5g464760 27.664 488 259 18 8 421 12 479 5.84e-41 152
MS.gene026523.t1 MTR_0036s0220 26.025 488 275 15 3 421 7 477 2.56e-40 150
MS.gene026523.t1 MTR_6g014290 26.446 484 270 15 8 421 10 477 3.59e-40 150
MS.gene026523.t1 MTR_4g094220 26.598 485 274 16 8 422 7 479 1.10e-39 148
MS.gene026523.t1 MTR_7g080960 26.441 503 253 16 3 424 7 473 2.86e-39 147
MS.gene026523.t1 MTR_6g013450 25.562 489 281 12 3 421 5 480 4.07e-39 147
MS.gene026523.t1 MTR_6g014040 25.451 499 270 16 2 421 5 480 1.27e-38 145
MS.gene026523.t1 MTR_6g014220 26.033 484 272 15 8 421 10 477 1.36e-38 145
MS.gene026523.t1 MTR_3g008010 24.846 487 284 12 3 421 5 477 1.64e-38 145
MS.gene026523.t1 MTR_6g013440 25.567 485 275 13 8 421 11 480 2.72e-38 144
MS.gene026523.t1 MTR_0288s0020 25.567 485 256 15 8 421 10 460 8.55e-38 143
MS.gene026523.t1 MTR_3g479520 24.335 489 286 14 8 427 15 488 1.12e-37 143
MS.gene026523.t1 MTR_7g011470 27.719 469 271 13 8 421 10 465 2.28e-37 142
MS.gene026523.t1 MTR_7g011470 27.292 469 269 13 8 421 10 461 3.37e-37 141
MS.gene026523.t1 MTR_6g014310 25.364 481 281 14 8 421 11 480 4.27e-36 139
MS.gene026523.t1 MTR_6g013960 24.948 485 278 13 8 421 10 479 6.09e-36 138
MS.gene026523.t1 MTR_6g014270 26.305 498 267 17 3 421 2 478 7.84e-36 138
MS.gene026523.t1 MTR_6g014020 25.257 487 284 15 3 421 5 479 2.43e-35 136
MS.gene026523.t1 MTR_6g014050 26.804 485 269 15 8 421 11 480 2.56e-35 136
MS.gene026523.t1 MTR_6g014186 26.856 458 278 17 1 421 1 438 9.01e-35 134
MS.gene026523.t1 MTR_6g011340 26.978 493 268 16 3 421 5 479 4.11e-33 130
MS.gene026523.t1 MTR_4g485630 24.490 490 273 15 7 422 8 474 6.14e-33 129
MS.gene026523.t1 MTR_5g058320 25.159 473 277 14 8 421 10 464 7.48e-33 129
MS.gene026523.t1 MTR_6g014187 23.909 481 288 12 8 421 10 479 1.08e-32 129
MS.gene026523.t1 MTR_6g013920 25.458 491 285 14 3 424 5 483 9.00e-32 126
MS.gene026523.t1 MTR_7g013200 26.940 464 254 17 8 418 5 436 1.39e-31 125
MS.gene026523.t1 MTR_6g013900 24.897 486 286 13 3 421 5 478 1.22e-30 123
MS.gene026523.t1 MTR_8g059425 24.896 482 280 14 8 421 10 477 3.64e-30 122
MS.gene026523.t1 MTR_6g014200 26.069 491 275 13 3 421 2 476 3.81e-30 122
MS.gene026523.t1 MTR_6g013680 25.781 384 241 14 64 421 9 374 1.10e-29 119
MS.gene026523.t1 MTR_6g014300 24.180 488 262 16 8 421 12 465 4.94e-29 118
MS.gene026523.t1 MTR_3g069710 24.841 471 272 13 9 425 13 455 7.32e-29 118
MS.gene026523.t1 MTR_7g013180 25.751 466 262 17 8 418 5 441 1.60e-28 117
MS.gene026523.t1 MTR_6g013990 25.358 489 269 13 8 421 10 477 1.64e-28 117
MS.gene026523.t1 MTR_7g071040 24.544 493 292 18 3 425 12 494 1.94e-28 117
MS.gene026523.t1 MTR_5g045970 23.246 499 294 13 3 425 11 496 2.39e-28 117
MS.gene026523.t1 MTR_5g031830 25.780 481 278 16 4 422 8 471 7.54e-28 115
MS.gene026523.t1 MTR_5g031860 26.205 477 272 17 8 422 12 470 8.07e-28 115
MS.gene026523.t1 MTR_6g014150 25.859 495 274 18 1 421 1 476 1.12e-27 115
MS.gene026523.t1 MTR_8g066610 24.390 492 281 17 6 424 7 480 1.38e-27 114
MS.gene026523.t1 MTR_7g070610 23.647 499 281 20 7 425 12 490 1.58e-27 114
MS.gene026523.t1 MTR_7g070800 23.887 494 290 18 4 426 2 480 3.25e-27 114
MS.gene026523.t1 MTR_5g031840 24.792 480 281 16 4 422 2 462 5.82e-27 112
MS.gene026523.t1 MTR_3g479470 24.167 480 283 16 8 420 13 478 6.23e-27 112
MS.gene026523.t1 MTR_7g013220 26.124 467 265 20 8 418 5 447 7.01e-27 112
MS.gene026523.t1 MTR_7g070660 24.900 498 279 20 3 425 6 483 8.89e-27 112
MS.gene026523.t1 MTR_5g072860 23.391 466 287 18 8 421 18 465 2.07e-26 111
MS.gene026523.t1 MTR_3g069690 25.319 470 267 15 8 421 8 449 2.22e-26 110
MS.gene026523.t1 MTR_7g070860 24.313 473 294 16 7 426 6 467 2.47e-26 111
MS.gene026523.t1 MTR_4g064987 24.477 478 269 16 1 421 1 443 3.92e-26 110
MS.gene026523.t1 MTR_4g064987 24.375 480 273 16 1 421 1 449 7.03e-26 109
MS.gene026523.t1 MTR_7g070740 23.387 496 293 18 3 425 6 487 1.48e-25 108
MS.gene026523.t1 MTR_7g070780 22.645 499 293 17 3 425 6 487 2.72e-25 108
MS.gene026523.t1 MTR_7g070940 23.413 504 268 17 7 426 8 477 1.93e-24 105
MS.gene026523.t1 MTR_5g039900 21.730 497 292 18 7 426 12 488 2.36e-24 105
MS.gene026523.t1 MTR_1g062380 23.636 495 292 16 7 426 15 498 4.53e-24 104
MS.gene026523.t1 MTR_7g070910 24.040 495 292 20 3 425 6 488 5.76e-24 104
MS.gene026523.t1 MTR_7g117405 25.103 486 275 16 8 421 12 480 7.73e-24 103
MS.gene026523.t1 MTR_1g040310 23.614 487 299 14 4 426 11 488 8.15e-24 103
MS.gene026523.t1 MTR_4g117980 24.409 508 269 21 4 425 7 485 1.01e-23 103
MS.gene026523.t1 MTR_7g070930 22.000 500 296 19 3 425 9 491 1.12e-23 103
MS.gene026523.t1 MTR_5g040030 21.774 496 294 17 7 425 13 491 1.88e-23 102
MS.gene026523.t1 MTR_7g055710 23.108 489 281 19 3 414 6 476 5.36e-23 101
MS.gene026523.t1 MTR_7g102490 24.063 507 282 17 1 423 1 488 5.85e-23 101
MS.gene026523.t1 MTR_5g072840 25.678 479 251 17 8 421 10 448 6.29e-23 100
MS.gene026523.t1 MTR_7g102550 23.952 501 283 14 1 420 1 484 9.42e-23 100
MS.gene026523.t1 MTR_7g070810 23.517 489 287 19 7 425 8 479 1.11e-22 100
MS.gene026523.t1 MTR_3g479610 24.723 271 146 5 208 427 55 318 1.26e-22 98.2
MS.gene026523.t1 MTR_4g117950 23.673 490 277 17 6 425 4 466 1.67e-22 99.8
MS.gene026523.t1 MTR_5g016660 22.178 505 291 16 3 426 5 488 1.71e-22 100
MS.gene026523.t1 MTR_8g012650 25.464 377 199 13 110 417 104 467 1.77e-22 99.8
MS.gene026523.t1 MTR_4g108250 22.490 498 299 18 3 425 6 491 6.84e-22 98.2
MS.gene026523.t1 MTR_6g014190 26.117 291 158 7 180 421 4 286 7.07e-22 95.5
MS.gene026523.t1 MTR_4g485620 23.617 470 271 18 22 421 3 454 1.06e-21 97.4
MS.gene026523.t1 MTR_3g031450 24.569 464 270 15 8 421 18 451 1.39e-21 97.1
MS.gene026523.t1 MTR_0891s0010 22.184 293 170 5 180 421 4 289 1.50e-21 94.7
MS.gene026523.t1 MTR_5g075440 23.013 478 278 15 8 424 10 458 1.99e-21 96.7
MS.gene026523.t1 MTR_6g035295 22.062 485 305 14 7 425 11 488 2.17e-21 96.7
MS.gene026523.t1 MTR_6g013435 25.806 310 201 8 131 421 7 306 2.23e-21 94.4
MS.gene026523.t1 MTR_6g014240 23.188 483 269 14 3 421 2 446 2.53e-21 96.3
MS.gene026523.t1 MTR_2g059240 24.370 476 278 15 8 421 13 468 6.10e-21 95.1
MS.gene026523.t1 MTR_8g044140 24.384 406 211 15 98 426 67 453 9.83e-21 94.4
MS.gene026523.t1 MTR_8g074550 27.640 322 202 11 6 315 6 308 1.17e-20 94.7
MS.gene026523.t1 MTR_8g012745 24.474 380 204 14 115 426 109 473 2.24e-20 93.6
MS.gene026523.t1 MTR_2g034990 23.260 503 277 20 6 425 9 485 3.39e-20 93.2
MS.gene026523.t1 MTR_3g031400 24.891 458 274 15 8 421 18 449 8.15e-20 91.7
MS.gene026523.t1 MTR_2g035040 24.422 389 207 14 110 425 16 390 9.81e-20 90.9
MS.gene026523.t1 MTR_8g012635 23.720 371 203 10 115 417 109 467 1.06e-19 91.7
MS.gene026523.t1 MTR_2g035020 22.541 488 299 15 6 425 9 485 1.91e-19 90.9
MS.gene026523.t1 MTR_7g012120 23.265 490 290 17 6 425 14 487 2.43e-19 90.5
MS.gene026523.t1 MTR_0536s0020 24.449 499 275 19 2 425 12 483 2.67e-19 90.5
MS.gene026523.t1 MTR_8g007585 26.292 445 234 21 8 421 10 391 4.06e-19 89.0
MS.gene026523.t1 MTR_7g102450 23.077 494 267 17 8 421 11 471 7.05e-19 89.0
MS.gene026523.t1 MTR_5g098930 26.087 368 213 14 7 342 4 344 1.23e-18 88.2
MS.gene026523.t1 MTR_4g117890 22.619 504 278 19 2 425 7 478 1.31e-18 88.2
MS.gene026523.t1 MTR_2g098430 25.000 496 270 20 9 423 7 481 1.39e-18 88.2
MS.gene026523.t1 MTR_5g090670 26.519 362 207 17 9 337 6 341 1.40e-18 88.2
MS.gene026523.t1 MTR_4g128720 22.246 472 276 12 7 419 14 453 2.41e-18 87.4
MS.gene026523.t1 MTR_4g485590 28.035 346 196 15 1 332 1 307 4.58e-18 86.3
MS.gene026523.t1 MTR_5g045960 22.133 497 286 18 7 421 8 485 4.86e-18 86.7
MS.gene026523.t1 MTR_5g067170 22.653 490 294 16 6 425 9 483 5.00e-18 86.7
MS.gene026523.t1 MTR_0009s0240 21.730 497 277 16 3 424 2 461 6.56e-18 85.9
MS.gene026523.t1 MTR_6g035185 22.984 496 296 16 6 429 9 490 8.27e-18 85.9
MS.gene026523.t1 MTR_2g046620 28.191 376 195 17 2 342 10 345 1.63e-17 84.7
MS.gene026523.t1 MTR_8g027885 22.899 476 280 13 6 417 16 468 1.92e-17 84.7
MS.gene026523.t1 MTR_2g008225 26.772 381 197 16 3 342 10 349 2.21e-17 84.3
MS.gene026523.t1 MTR_0184s0040 24.843 479 270 17 7 417 20 476 2.34e-17 84.3
MS.gene026523.t1 MTR_0078s0190 24.843 479 270 17 7 417 20 476 2.34e-17 84.3
MS.gene026523.t1 MTR_7g102460 22.510 502 294 18 1 423 1 486 3.44e-17 84.0
MS.gene026523.t1 MTR_2g008220 25.469 373 212 15 3 342 9 348 6.67e-17 82.8
MS.gene026523.t1 MTR_4g082810 24.566 346 208 11 7 325 6 325 1.16e-16 82.0
MS.gene026523.t1 MTR_5g090700 26.761 355 215 15 9 337 6 341 1.62e-16 81.6
MS.gene026523.t1 MTR_8g071070 21.721 488 298 15 3 424 2 471 1.72e-16 81.6
MS.gene026523.t1 MTR_5g090620 25.212 353 220 13 9 336 6 339 1.93e-16 81.6
MS.gene026523.t1 MTR_4g485640 22.863 468 271 15 10 410 211 655 2.29e-16 81.6
MS.gene026523.t1 MTR_0184s0030 23.416 363 208 10 115 417 111 463 2.88e-16 80.9
MS.gene026523.t1 MTR_8g083300 31.690 142 89 2 9 150 8 141 3.21e-16 76.3
MS.gene026523.t1 MTR_5g070040 26.531 343 175 13 128 410 130 455 3.54e-16 80.9
MS.gene026523.t1 MTR_7g070870 25.152 330 209 14 18 335 29 332 3.77e-16 80.5
MS.gene026523.t1 MTR_5g090660 23.967 363 230 13 8 342 5 349 3.84e-16 80.9
MS.gene026523.t1 MTR_8g032950 23.260 503 285 17 1 425 5 484 4.31e-16 80.5
MS.gene026523.t1 MTR_7g047030 22.840 486 290 15 8 427 6 472 4.97e-16 80.1
MS.gene026523.t1 MTR_7g047270 22.840 486 290 15 8 427 6 472 4.97e-16 80.1
MS.gene026523.t1 MTR_8g006710 24.510 408 215 14 89 422 78 466 5.13e-16 80.1
MS.gene026523.t1 MTR_8g027870 22.840 486 268 14 6 417 16 468 5.98e-16 80.1
MS.gene026523.t1 MTR_5g029800 23.705 502 272 18 6 425 9 481 6.07e-16 80.1
MS.gene026523.t1 MTR_4g128690 22.199 473 284 15 1 419 8 450 7.08e-16 79.7
MS.gene026523.t1 MTR_7g046490 26.062 353 182 11 128 416 121 458 8.08e-16 79.7
MS.gene026523.t1 MTR_8g006730 24.682 393 215 14 93 417 83 462 1.14e-15 79.3
MS.gene026523.t1 MTR_5g019580 21.616 495 284 18 7 420 6 477 1.16e-15 79.3
MS.gene026523.t1 MTR_7g102560 22.024 504 289 18 1 421 1 483 1.27e-15 79.0
MS.gene026523.t1 MTR_8g465670 26.630 368 209 14 9 342 8 348 1.56e-15 79.0
MS.gene026523.t1 MTR_4g123553 26.509 381 206 17 2 349 9 348 2.22e-15 78.2
MS.gene026523.t1 MTR_5g090630 26.136 352 210 12 8 336 5 329 3.33e-15 77.8
MS.gene026523.t1 MTR_5g090580 25.770 357 212 15 9 336 6 338 3.55e-15 77.8
MS.gene026523.t1 MTR_5g090610 24.419 344 223 10 8 337 5 325 5.27e-15 77.0
MS.gene026523.t1 MTR_5g087620 23.108 502 286 20 8 424 10 496 1.17e-14 76.3
MS.gene026523.t1 MTR_8g077590 23.913 368 205 10 112 417 108 462 1.40e-14 75.9
MS.gene026523.t1 MTR_5g019580 21.429 490 263 17 7 420 58 501 1.41e-14 75.9
MS.gene026523.t1 MTR_0078s0010 25.833 360 225 12 8 342 6 348 1.85e-14 75.5
MS.gene026523.t1 MTR_8g009067 24.274 379 191 14 117 418 102 461 5.22e-14 73.9
MS.gene026523.t1 MTR_8g068340 27.222 360 199 15 7 336 11 337 6.10e-14 73.9
MS.gene026523.t1 MTR_7g102520 22.336 488 296 19 7 421 11 488 7.07e-14 73.9
MS.gene026523.t1 MTR_8g009073 22.382 487 271 15 7 417 5 460 8.20e-14 73.6
MS.gene026523.t1 MTR_1g090270 23.664 393 247 14 7 378 14 374 1.09e-13 73.2
MS.gene026523.t1 MTR_8g006220 25.543 368 221 11 9 342 7 355 1.09e-13 73.2
MS.gene026523.t1 MTR_8g009055 24.797 492 255 19 7 417 5 462 1.21e-13 72.8
MS.gene026523.t1 MTR_5g090600 22.432 477 277 18 9 421 6 453 1.76e-13 72.4
MS.gene026523.t1 MTR_8g009067 24.302 358 183 13 130 418 5 343 2.88e-13 71.2
MS.gene026523.t1 MTR_8g068360 27.195 353 207 12 7 336 11 336 3.09e-13 71.6
MS.gene026523.t1 MTR_6g042310 28.531 354 192 18 7 336 17 333 4.46e-13 71.2
MS.gene026523.t1 MTR_0078s0060 25.086 291 141 11 201 427 194 471 7.26e-13 70.5
MS.gene026523.t1 MTR_5g090650 23.796 353 195 12 7 336 4 305 7.26e-13 69.7
MS.gene026523.t1 MTR_4g082820 22.718 493 270 19 7 422 6 464 9.02e-13 70.1
MS.gene026523.t1 MTR_6g488280 23.664 393 212 15 93 415 84 458 1.36e-12 69.7
MS.gene026523.t1 MTR_0428s0010 23.664 393 212 15 93 415 84 458 1.36e-12 69.7
MS.gene026523.t1 MTR_0199s0010 26.033 242 148 11 8 228 10 241 2.85e-12 67.4
MS.gene026523.t1 MTR_6g033725 23.988 346 184 13 137 424 133 457 3.02e-12 68.6
MS.gene026523.t1 MTR_6g023665 22.500 480 275 17 9 417 14 467 3.40e-12 68.6
MS.gene026523.t1 MTR_7g070760 28.333 180 102 6 206 359 24 202 1.35e-11 63.9
MS.gene026523.t1 MTR_5g072850 27.869 244 145 7 201 421 146 381 1.44e-11 66.2
MS.gene026523.t1 MTR_0078s0200 27.273 209 134 7 115 317 111 307 1.57e-11 65.5
MS.gene026523.t1 MTR_4g077960 27.390 387 201 22 18 367 2 345 1.59e-11 66.2
MS.gene026523.t1 MTR_2g046750 28.767 219 133 8 128 336 129 334 2.03e-11 65.9
MS.gene026523.t1 MTR_6g033625 23.563 348 227 11 9 336 5 333 2.30e-11 65.9
MS.gene026523.t1 MTR_2g040530 28.696 230 141 7 116 333 112 330 2.33e-11 65.9
MS.gene026523.t1 MTR_6g078320 20.325 492 293 16 8 422 11 480 2.37e-11 65.9
MS.gene026523.t1 MTR_6g014185 27.542 236 130 9 215 424 127 347 3.05e-11 65.1
MS.gene026523.t1 MTR_5g090690 27.675 271 148 14 82 337 32 269 3.37e-11 65.1
MS.gene026523.t1 MTR_3g479620 29.375 160 101 6 8 162 6 158 4.40e-11 61.6
MS.gene026523.t1 MTR_7g470610 26.667 195 118 10 126 315 4 178 4.78e-11 63.9
MS.gene026523.t1 MTR_7g070583 26.667 195 118 10 126 315 4 178 4.78e-11 63.9
MS.gene026523.t1 MTR_8g006260 29.412 187 90 8 183 342 181 352 7.59e-11 64.3
MS.gene026523.t1 MTR_5g027210 26.154 260 106 13 209 393 207 455 8.64e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene026523.t1 AT4G15480 46.368 468 199 5 3 421 14 478 1.44e-145 424
MS.gene026523.t1 AT3G21560 44.043 470 202 9 6 421 10 472 5.77e-128 379
MS.gene026523.t1 AT4G15500 44.167 480 203 12 1 428 3 469 1.53e-127 377
MS.gene026523.t1 AT4G15490 43.552 473 208 11 1 421 1 466 1.60e-122 364
MS.gene026523.t1 AT2G23260 33.192 473 244 18 1 421 1 453 8.05e-63 209
MS.gene026523.t1 AT1G05680 28.817 465 256 12 8 418 6 449 5.16e-58 197
MS.gene026523.t1 AT2G23250 32.967 455 241 15 11 421 1 435 6.79e-58 196
MS.gene026523.t1 AT1G05675 28.850 461 261 12 8 418 6 449 1.07e-55 191
MS.gene026523.t1 AT4G14090 29.512 471 257 13 2 420 7 454 5.14e-55 189
MS.gene026523.t1 AT2G43820 28.753 473 247 13 8 422 7 447 1.63e-53 185
MS.gene026523.t1 AT4G15550 28.600 493 251 17 2 420 7 472 7.41e-52 181
MS.gene026523.t1 AT1G05560 30.785 484 234 18 5 421 2 451 9.87e-51 178
MS.gene026523.t1 AT1G05560 30.849 483 233 18 6 421 53 501 1.55e-50 179
MS.gene026523.t1 AT2G31750 29.114 474 267 14 1 423 1 456 4.48e-50 176
MS.gene026523.t1 AT2G31750 29.114 474 267 14 1 423 1 456 6.53e-50 176
MS.gene026523.t1 AT2G43840 27.941 476 247 14 8 422 7 447 1.84e-49 174
MS.gene026523.t1 AT2G43840 27.941 476 247 14 8 422 7 447 5.95e-49 173
MS.gene026523.t1 AT1G05530 29.289 478 246 15 8 421 5 454 1.51e-48 172
MS.gene026523.t1 AT1G22340 28.921 491 257 16 8 422 13 487 9.11e-48 171
MS.gene026523.t1 AT1G22400 27.957 465 253 15 8 404 13 463 1.60e-47 170
MS.gene026523.t1 AT2G31790 26.170 470 264 11 8 418 8 453 2.08e-47 169
MS.gene026523.t1 AT1G22360 27.083 480 272 14 8 421 10 477 2.71e-45 164
MS.gene026523.t1 AT1G78270 27.273 462 261 14 8 405 13 463 7.99e-45 162
MS.gene026523.t1 AT1G24100 26.694 487 266 14 1 423 1 460 4.21e-44 160
MS.gene026523.t1 AT1G22380 25.826 484 273 13 8 421 13 480 4.56e-43 158
MS.gene026523.t1 AT1G22370 26.415 477 274 15 8 421 13 475 1.72e-42 156
MS.gene026523.t1 AT1G22360 26.042 480 265 14 8 421 10 465 3.33e-42 155
MS.gene026523.t1 AT2G15490 27.291 491 281 14 3 425 2 484 1.84e-40 150
MS.gene026523.t1 AT2G15490 27.198 489 281 14 3 425 2 481 1.18e-39 148
MS.gene026523.t1 AT2G15480 26.978 493 269 15 7 425 9 484 4.55e-39 147
MS.gene026523.t1 AT2G15480 26.243 503 270 16 7 425 9 494 4.00e-36 139
MS.gene026523.t1 AT2G36970 24.845 483 283 14 3 422 6 471 1.15e-35 137
MS.gene026523.t1 AT4G34138 25.714 490 282 14 5 426 8 483 7.85e-32 127
MS.gene026523.t1 AT2G36770 25.151 497 271 18 6 421 12 488 7.60e-31 124
MS.gene026523.t1 AT2G28080 25.800 469 270 14 12 421 22 471 1.89e-30 123
MS.gene026523.t1 AT2G36760 24.948 485 287 13 6 421 12 488 3.14e-30 122
MS.gene026523.t1 AT4G34131 26.025 488 269 18 7 420 9 478 8.12e-30 121
MS.gene026523.t1 AT2G36800 24.590 488 294 15 5 424 9 490 2.97e-29 119
MS.gene026523.t1 AT2G36750 25.251 499 279 17 4 425 6 487 5.16e-29 119
MS.gene026523.t1 AT2G30140 25.949 474 256 18 8 421 13 451 1.27e-27 114
MS.gene026523.t1 AT2G23210 31.930 285 166 11 8 284 10 274 3.71e-27 110
MS.gene026523.t1 AT2G30140 26.105 475 253 19 8 421 13 450 9.99e-27 112
MS.gene026523.t1 AT2G30150 25.667 487 248 18 8 424 13 455 1.80e-26 111
MS.gene026523.t1 AT2G36790 25.662 491 282 17 6 424 11 490 7.67e-26 109
MS.gene026523.t1 AT3G46660 25.720 486 249 19 9 424 15 458 1.04e-25 108
MS.gene026523.t1 AT2G36780 23.838 495 284 14 7 424 13 491 1.05e-25 109
MS.gene026523.t1 AT4G34135 25.000 488 275 15 7 420 10 480 2.42e-25 108
MS.gene026523.t1 AT2G30150 25.673 483 245 18 12 424 1 439 4.07e-25 107
MS.gene026523.t1 AT3G53160 24.291 494 289 17 1 421 1 482 1.92e-24 105
MS.gene026523.t1 AT5G38040 24.468 470 253 19 16 421 18 449 2.32e-24 105
MS.gene026523.t1 AT5G05870 24.948 481 280 13 1 424 1 457 1.26e-23 103
MS.gene026523.t1 AT5G03490 24.740 481 268 18 6 424 17 465 1.67e-23 102
MS.gene026523.t1 AT5G59590 22.803 478 267 18 8 421 10 449 4.62e-23 101
MS.gene026523.t1 AT3G46650 24.145 468 248 17 8 417 10 428 5.97e-23 100
MS.gene026523.t1 AT5G14860 24.900 498 282 17 1 425 1 479 7.93e-23 100
MS.gene026523.t1 AT3G46670 23.750 480 266 17 8 424 9 451 1.56e-22 99.8
MS.gene026523.t1 AT3G46700 23.789 475 264 18 8 422 9 445 1.62e-22 99.8
MS.gene026523.t1 AT4G34135 26.284 331 208 11 7 315 10 326 1.96e-22 97.8
MS.gene026523.t1 AT3G46690 24.000 475 262 17 8 419 9 447 2.77e-22 99.0
MS.gene026523.t1 AT5G59580 22.453 481 276 18 8 427 9 453 3.33e-22 99.0
MS.gene026523.t1 AT2G16890 24.740 481 281 20 8 425 9 471 2.02e-21 96.7
MS.gene026523.t1 AT1G10400 23.542 480 277 14 7 420 6 461 3.12e-20 93.2
MS.gene026523.t1 AT3G21780 20.816 490 293 15 7 423 3 470 4.65e-20 92.8
MS.gene026523.t1 AT1G22370 24.315 292 165 7 180 421 20 305 1.27e-19 89.4
MS.gene026523.t1 AT3G11340 22.863 468 273 15 9 421 10 444 1.65e-19 90.9
MS.gene026523.t1 AT1G51210 24.605 443 255 17 2 393 15 429 2.14e-19 90.5
MS.gene026523.t1 AT5G38010 24.370 476 266 17 8 421 10 453 2.21e-19 90.5
MS.gene026523.t1 AT3G55700 22.547 479 284 15 1 421 1 450 4.05e-19 89.7
MS.gene026523.t1 AT2G26480 21.610 472 278 16 8 421 8 445 4.94e-19 89.4
MS.gene026523.t1 AT5G17050 21.444 471 293 10 8 424 12 459 5.09e-19 89.4
MS.gene026523.t1 AT3G46680 22.553 470 273 17 8 418 9 446 7.56e-19 89.0
MS.gene026523.t1 AT3G29630 28.090 356 207 13 1 342 1 321 1.82e-18 87.8
MS.gene026523.t1 AT4G15280 23.108 502 274 20 4 421 32 505 1.85e-18 87.8
MS.gene026523.t1 AT4G15280 23.046 499 272 20 7 421 3 473 2.91e-18 87.0
MS.gene026523.t1 AT3G02100 23.391 466 288 17 8 422 13 460 3.27e-18 87.0
MS.gene026523.t1 AT3G55710 22.385 478 276 15 8 421 8 454 4.98e-18 86.3
MS.gene026523.t1 AT1G30530 22.869 481 268 15 8 424 12 453 9.85e-18 85.5
MS.gene026523.t1 AT5G05860 23.270 477 273 18 4 421 5 447 1.41e-17 85.1
MS.gene026523.t1 AT3G21790 22.421 504 276 20 8 423 4 480 1.57e-17 85.1
MS.gene026523.t1 AT5G12890 24.444 360 243 11 1 341 1 350 3.23e-17 84.0
MS.gene026523.t1 AT5G05900 24.635 479 271 21 1 421 1 447 6.13e-17 83.2
MS.gene026523.t1 AT3G21760 22.088 498 289 16 7 423 3 482 2.78e-16 81.3
MS.gene026523.t1 AT3G46720 24.520 469 256 20 8 418 9 437 3.46e-16 80.9
MS.gene026523.t1 AT5G54010 24.930 357 221 11 1 342 1 325 4.33e-16 80.5
MS.gene026523.t1 AT2G29740 23.238 383 225 11 1 342 1 355 8.31e-16 79.7
MS.gene026523.t1 AT5G05880 22.594 478 283 14 1 421 1 448 1.47e-15 79.0
MS.gene026523.t1 AT5G05890 22.998 487 274 16 1 421 1 452 1.71e-15 78.6
MS.gene026523.t1 AT4G01070 26.685 356 216 16 3 336 4 336 2.38e-15 78.2
MS.gene026523.t1 AT1G50580 29.912 341 202 14 1 336 1 309 2.55e-15 78.2
MS.gene026523.t1 AT4G01070 26.685 356 216 16 3 336 4 336 4.07e-15 76.6
MS.gene026523.t1 AT3G21800 20.842 499 284 20 9 423 6 477 4.47e-15 77.4
MS.gene026523.t1 AT3G16520 36.667 150 73 7 207 342 204 345 1.38e-14 75.9
MS.gene026523.t1 AT3G16520 36.667 150 73 7 207 342 204 345 1.39e-14 75.9
MS.gene026523.t1 AT3G16520 36.667 150 73 7 207 342 204 345 1.44e-14 75.9
MS.gene026523.t1 AT3G21750 21.188 505 269 17 7 421 3 468 2.17e-14 75.5
MS.gene026523.t1 AT2G16890 24.789 355 228 16 8 341 9 345 4.25e-14 74.3
MS.gene026523.t1 AT2G29750 23.138 376 234 11 1 342 1 355 9.98e-14 73.2
MS.gene026523.t1 AT5G49690 24.332 337 219 11 7 332 9 320 1.20e-12 69.7
MS.gene026523.t1 AT1G01390 23.720 371 228 12 3 342 21 367 2.78e-12 68.9
MS.gene026523.t1 AT1G01390 23.720 371 228 12 3 342 4 350 2.93e-12 68.6
MS.gene026523.t1 AT4G15260 21.351 370 202 12 124 421 2 354 1.74e-11 65.9
MS.gene026523.t1 AT5G66690 24.370 357 222 13 5 337 4 336 6.29e-11 64.7

Find 69 sgRNAs with CRISPR-Local

Find 110 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTACTTGCACCTTTAATATT+TGG 0.144668 1.1:+17442663 None:intergenic
TTTAGTCCATATCCATTTCT+AGG 0.207542 1.1:-17442831 MS.gene026523:CDS
TGAAATTGCATATGGGTTAT+TGG 0.235835 1.1:-17442514 MS.gene026523:CDS
TAGAAGATGATGATCCTATT+AGG 0.242108 1.1:-17443175 MS.gene026523:CDS
TCTGTGGTTTATATTTCTTT+TGG 0.244642 1.1:-17442570 MS.gene026523:CDS
AGAAATGGATATGGACTAAA+AGG 0.255462 1.1:+17442834 None:intergenic
TTGTTTATGATACAAGAAAT+AGG 0.301786 1.1:+17443062 None:intergenic
CTAAAAGGATGAAGAAAATC+TGG 0.309021 1.1:+17442849 None:intergenic
ATCCTTCTTATCTCATTTCC+AGG 0.325712 1.1:-17443380 MS.gene026523:CDS
AAGGATATGAATGGGAGTTT+TGG 0.326347 1.1:+17443397 None:intergenic
ATATAAACCACAGAATCTTT+TGG 0.341319 1.1:+17442579 None:intergenic
TGCAATCAAGTGGAAGAAAA+TGG 0.364528 1.1:-17442088 MS.gene026523:CDS
AGAAGATGATGATCCTATTA+GGG 0.383240 1.1:-17443174 MS.gene026523:CDS
GCTTATTAGAAGCAACAATA+GGG 0.383752 1.1:-17442137 MS.gene026523:CDS
CAAGTGAATGAAATTGCATA+TGG 0.385064 1.1:-17442522 MS.gene026523:CDS
GTGAGAGAACCATCACCTAT+TGG 0.391537 1.1:+17443221 None:intergenic
CTATAACTATTTCAACAAAC+TGG 0.392630 1.1:-17442946 MS.gene026523:CDS
GTAGGGATTAGATTGGGTTA+TGG 0.399166 1.1:-17442204 MS.gene026523:CDS
TCACAAAGATTTGCCCTAAT+AGG 0.414772 1.1:+17443161 None:intergenic
AAGATGAGTGTCCCTAGAAA+TGG 0.414833 1.1:+17442819 None:intergenic
TTTGCCAGATGGGTTCTTAG+AGG 0.420612 1.1:-17442424 MS.gene026523:CDS
ATCATGCTCTAGTTCTTCAT+AGG 0.422004 1.1:+17442749 None:intergenic
TGCTTATTAGAAGCAACAAT+AGG 0.433211 1.1:-17442138 MS.gene026523:CDS
GGGTTTATGTGTCCTTGTCC+TGG 0.439998 1.1:+17443362 None:intergenic
AACCCTACTTCCTTAGGAGG+TGG 0.451750 1.1:+17442459 None:intergenic
TTTGGTGTAGGGATTAGATT+GGG 0.453004 1.1:-17442210 MS.gene026523:CDS
GAGATAAGAAGGATATGAAT+GGG 0.465616 1.1:+17443389 None:intergenic
AGTGTCCCTAGAAATGGATA+TGG 0.471591 1.1:+17442825 None:intergenic
TCACAAACCCAAGGAACAAA+AGG 0.474744 1.1:+17443038 None:intergenic
TGAGATAAGAAGGATATGAA+TGG 0.481469 1.1:+17443388 None:intergenic
ATTTCATTCACTTGTTCTTG+TGG 0.484886 1.1:+17442531 None:intergenic
TTGATCATTTGAGACAGAAA+AGG 0.487076 1.1:+17443107 None:intergenic
AAGCCACCTCCTAAGGAAGT+AGG 0.488582 1.1:-17442462 MS.gene026523:CDS
GAGGAAGCAGTGGCCATTGG+TGG 0.491726 1.1:-17442063 MS.gene026523:CDS
TTGTATTTAAGAACTTGAAA+AGG 0.493342 1.1:+17442879 None:intergenic
TTAGTCCATATCCATTTCTA+GGG 0.493488 1.1:-17442830 MS.gene026523:CDS
AGCAAAGTGTCTTGCTGCAA+AGG 0.495322 1.1:-17443327 MS.gene026523:CDS
CTTATCTCATTTCCAGGACA+AGG 0.501885 1.1:-17443374 MS.gene026523:CDS
CATTCACTTGTTCTTGTGGA+AGG 0.504042 1.1:+17442535 None:intergenic
GTTTCCTCTAAGAACCCATC+TGG 0.511421 1.1:+17442420 None:intergenic
GCGGAGGAAGCAGTGGCCAT+TGG 0.515638 1.1:-17442066 MS.gene026523:CDS
GGTACTAAAGCCACCTCCTA+AGG 0.519923 1.1:-17442469 MS.gene026523:CDS
GTCCTGGAAATGAGATAAGA+AGG 0.523887 1.1:+17443378 None:intergenic
TCAATCCACATAAGATCCAT+TGG 0.525363 1.1:-17442702 MS.gene026523:CDS
TTTAACCCTACTTCCTTAGG+AGG 0.534962 1.1:+17442456 None:intergenic
ATGGACCAATGGATCTTATG+TGG 0.538991 1.1:+17442697 None:intergenic
AGCCACCTCCTAAGGAAGTA+GGG 0.539023 1.1:-17442461 MS.gene026523:CDS
TTCATCACAACAAAGAAAGC+TGG 0.541707 1.1:-17443290 MS.gene026523:CDS
GCAAAGTGTCTTGCTGCAAA+GGG 0.547523 1.1:-17443326 MS.gene026523:CDS
CACTTTGCTAATCTAAGAAG+AGG 0.549473 1.1:+17443341 None:intergenic
TAAAAGGATGAAGAAAATCT+GGG 0.551212 1.1:+17442850 None:intergenic
CACAAAGCCAAAAGATTCTG+TGG 0.563752 1.1:-17442586 MS.gene026523:CDS
AAGTGAATGAAATTGCATAT+GGG 0.578687 1.1:-17442521 MS.gene026523:CDS
TGAAGCAAAATGCAATCAAG+TGG 0.582061 1.1:-17442098 MS.gene026523:CDS
TTCATCAAGATTCCGATCAG+AGG 0.582219 1.1:+17442038 None:intergenic
AAAGGTGCAAGTAATATTCG+TGG 0.583488 1.1:-17442654 MS.gene026523:CDS
TGAACCCATAATAAAACAGA+AGG 0.585096 1.1:+17442993 None:intergenic
TCACTCATTCCAATAGGTGA+TGG 0.587734 1.1:-17443230 MS.gene026523:CDS
CCATTGGTGGATCCTCTGAT+CGG 0.591041 1.1:-17442050 MS.gene026523:CDS
ACTTTGCTAATCTAAGAAGA+GGG 0.596564 1.1:+17443342 None:intergenic
GAAAATGGCGGAGGAAGCAG+TGG 0.620986 1.1:-17442073 MS.gene026523:CDS
TAAACTTGTAACAAGAGATG+AGG 0.624770 1.1:-17442169 MS.gene026523:CDS
CTTATTAGAAGCAACAATAG+GGG 0.627994 1.1:-17442136 MS.gene026523:CDS
ATGATTGCAATATTATAGAG+TGG 0.634609 1.1:-17442614 MS.gene026523:CDS
CCGATCAGAGGATCCACCAA+TGG 0.642803 1.1:+17442050 None:intergenic
CAAGTGGAAGAAAATGGCGG+AGG 0.655929 1.1:-17442082 MS.gene026523:CDS
TGAGCTACATCACAAACCCA+AGG 0.685226 1.1:+17443029 None:intergenic
TGTGATGTAGCTCATGAACA+TGG 0.687366 1.1:-17443020 MS.gene026523:CDS
AATCAAGTGGAAGAAAATGG+CGG 0.731684 1.1:-17442085 MS.gene026523:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAAAAATCCAAATATTAA+AGG - chr1.1:17442728-17442747 MS.gene026523:CDS 10.0%
!!! ATATTTGGATTTTTAAACAA+TGG + chr1.1:17442725-17442744 None:intergenic 15.0%
!! TTGTATTTAAGAACTTGAAA+AGG + chr1.1:17442524-17442543 None:intergenic 20.0%
!! TTGTTTATGATACAAGAAAT+AGG + chr1.1:17442341-17442360 None:intergenic 20.0%
!!! ATAGAACAACTAAAACTTTT+TGG - chr1.1:17442266-17442285 MS.gene026523:intron 20.0%
!!! ATTCTAATGTTTCATTTTTG+TGG - chr1.1:17442909-17442928 MS.gene026523:CDS 20.0%
!!! TAGAACAACTAAAACTTTTT+GGG - chr1.1:17442267-17442286 MS.gene026523:intron 20.0%
!!! TATTCCTTCTGTTTTATTAT+GGG - chr1.1:17442403-17442422 MS.gene026523:intron 20.0%
!!! TTCTAATGTTTCATTTTTGT+GGG - chr1.1:17442910-17442929 MS.gene026523:CDS 20.0%
! AAGTGAATGAAATTGCATAT+GGG - chr1.1:17442879-17442898 MS.gene026523:CDS 25.0%
! ATGATTGCAATATTATAGAG+TGG - chr1.1:17442786-17442805 MS.gene026523:CDS 25.0%
! CTATAACTATTTCAACAAAC+TGG - chr1.1:17442454-17442473 MS.gene026523:CDS 25.0%
! TAAAAGGATGAAGAAAATCT+GGG + chr1.1:17442553-17442572 None:intergenic 25.0%
! TTACTTGCACCTTTAATATT+TGG + chr1.1:17442740-17442759 None:intergenic 25.0%
!! ATATAAACCACAGAATCTTT+TGG + chr1.1:17442824-17442843 None:intergenic 25.0%
!! ATATAACGTTCTTTTTCTGA+AGG + chr1.1:17442488-17442507 None:intergenic 25.0%
!! ATTTTTAAACAATGGACCAA+TGG + chr1.1:17442717-17442736 None:intergenic 25.0%
!! CTGTGGTTTATATTTCTTTT+GGG - chr1.1:17442831-17442850 MS.gene026523:CDS 25.0%
!! TATAACGTTCTTTTTCTGAA+GGG + chr1.1:17442487-17442506 None:intergenic 25.0%
!! TCTGTGGTTTATATTTCTTT+TGG - chr1.1:17442830-17442849 MS.gene026523:CDS 25.0%
!!! AAGTTTTTGGTAGATGTTTT+TGG - chr1.1:17443172-17443191 MS.gene026523:CDS 25.0%
!!! GTATTCCTTCTGTTTTATTA+TGG - chr1.1:17442402-17442421 MS.gene026523:intron 25.0%
ACTTTGCTAATCTAAGAAGA+GGG + chr1.1:17442061-17442080 None:intergenic 30.0%
AGAAGATGATGATCCTATTA+GGG - chr1.1:17442226-17442245 MS.gene026523:CDS 30.0%
ATTTCATTCACTTGTTCTTG+TGG + chr1.1:17442872-17442891 None:intergenic 30.0%
CAAGTGAATGAAATTGCATA+TGG - chr1.1:17442878-17442897 MS.gene026523:CDS 30.0%
CTAAAAGGATGAAGAAAATC+TGG + chr1.1:17442554-17442573 None:intergenic 30.0%
CTTATTAGAAGCAACAATAG+GGG - chr1.1:17443264-17443283 MS.gene026523:CDS 30.0%
GAAAAATCACTCATTCCAAT+AGG - chr1.1:17442164-17442183 MS.gene026523:CDS 30.0%
GAGATAAGAAGGATATGAAT+GGG + chr1.1:17442014-17442033 None:intergenic 30.0%
GCTTATTAGAAGCAACAATA+GGG - chr1.1:17443263-17443282 MS.gene026523:CDS 30.0%
GTATGTTTCATAACACATTG+TGG - chr1.1:17443067-17443086 MS.gene026523:CDS 30.0%
GTTATGAAACATACCAATGA+AGG + chr1.1:17443061-17443080 None:intergenic 30.0%
TAAACTTGTAACAAGAGATG+AGG - chr1.1:17443231-17443250 MS.gene026523:CDS 30.0%
TAGAAGATGATGATCCTATT+AGG - chr1.1:17442225-17442244 MS.gene026523:CDS 30.0%
TGAACCCATAATAAAACAGA+AGG + chr1.1:17442410-17442429 None:intergenic 30.0%
TGAGATAAGAAGGATATGAA+TGG + chr1.1:17442015-17442034 None:intergenic 30.0%
TGCTTATTAGAAGCAACAAT+AGG - chr1.1:17443262-17443281 MS.gene026523:CDS 30.0%
TTAGTCCATATCCATTTCTA+GGG - chr1.1:17442570-17442589 MS.gene026523:CDS 30.0%
TTTAGTCCATATCCATTTCT+AGG - chr1.1:17442569-17442588 MS.gene026523:CDS 30.0%
! AAACAATCCTTTTGTTCCTT+GGG - chr1.1:17442355-17442374 MS.gene026523:intron 30.0%
! AGAAATGGATATGGACTAAA+AGG + chr1.1:17442569-17442588 None:intergenic 30.0%
! AGTCACAAATGCAAAGTTTT+TGG - chr1.1:17443159-17443178 MS.gene026523:CDS 30.0%
! TAAACAATCCTTTTGTTCCT+TGG - chr1.1:17442354-17442373 MS.gene026523:intron 30.0%
! TCGGAATCTTGATGAATTTT+TGG - chr1.1:17443369-17443388 MS.gene026523:CDS 30.0%
! TGAAATTGCATATGGGTTAT+TGG - chr1.1:17442886-17442905 MS.gene026523:CDS 30.0%
! TTGATCATTTGAGACAGAAA+AGG + chr1.1:17442296-17442315 None:intergenic 30.0%
!! TCAATAGAAGCACTTAGTTT+AGG - chr1.1:17443100-17443119 MS.gene026523:CDS 30.0%
!!! ACTTTTGAGTTCTTTGATGA+TGG - chr1.1:17442200-17442219 MS.gene026523:CDS 30.0%
AATCAAGTGGAAGAAAATGG+CGG - chr1.1:17443315-17443334 MS.gene026523:CDS 35.0%
AATGTTGACATTTCCAGCAT+GGG - chr1.1:17443129-17443148 MS.gene026523:CDS 35.0%
AGAGAGGAAAAGTTGTGAAA+TGG - chr1.1:17443008-17443027 MS.gene026523:CDS 35.0%
ATCCTTCTTATCTCATTTCC+AGG - chr1.1:17442020-17442039 MS.gene026523:CDS 35.0%
CACTTTGCTAATCTAAGAAG+AGG + chr1.1:17442062-17442081 None:intergenic 35.0%
GTTTCATAACACATTGTGGT+TGG - chr1.1:17443071-17443090 MS.gene026523:CDS 35.0%
TCAATCCACATAAGATCCAT+TGG - chr1.1:17442698-17442717 MS.gene026523:CDS 35.0%
TCACAAAGATTTGCCCTAAT+AGG + chr1.1:17442242-17442261 None:intergenic 35.0%
TGAAGCAAAATGCAATCAAG+TGG - chr1.1:17443302-17443321 MS.gene026523:CDS 35.0%
TGCAATCAAGTGGAAGAAAA+TGG - chr1.1:17443312-17443331 MS.gene026523:CDS 35.0%
TTCATCACAACAAAGAAAGC+TGG - chr1.1:17442110-17442129 MS.gene026523:CDS 35.0%
! AAAGAACATGTTTTGCCAGA+TGG - chr1.1:17442965-17442984 MS.gene026523:CDS 35.0%
! AAAGGTGCAAGTAATATTCG+TGG - chr1.1:17442746-17442765 MS.gene026523:CDS 35.0%
! AAGAACATGTTTTGCCAGAT+GGG - chr1.1:17442966-17442985 MS.gene026523:CDS 35.0%
! AAGGATATGAATGGGAGTTT+TGG + chr1.1:17442006-17442025 None:intergenic 35.0%
! TCTTTTAACCCTACTTCCTT+AGG + chr1.1:17442950-17442969 None:intergenic 35.0%
! TTTGGTGTAGGGATTAGATT+GGG - chr1.1:17443190-17443209 MS.gene026523:CDS 35.0%
!! ATCATGCTCTAGTTCTTCAT+AGG + chr1.1:17442654-17442673 None:intergenic 35.0%
!! TTTTGGTGTAGGGATTAGAT+TGG - chr1.1:17443189-17443208 MS.gene026523:CDS 35.0%
!!! TGGTAGATGTTTTTGGTGTA+GGG - chr1.1:17443179-17443198 MS.gene026523:CDS 35.0%
!!! TTGGTAGATGTTTTTGGTGT+AGG - chr1.1:17443178-17443197 MS.gene026523:CDS 35.0%
AACAATAGGGGAAAAAGCTG+AGG - chr1.1:17443276-17443295 MS.gene026523:CDS 40.0%
AAGATGAGTGTCCCTAGAAA+TGG + chr1.1:17442584-17442603 None:intergenic 40.0%
AGTGTCCCTAGAAATGGATA+TGG + chr1.1:17442578-17442597 None:intergenic 40.0%
ATGGACCAATGGATCTTATG+TGG + chr1.1:17442706-17442725 None:intergenic 40.0%
ATGTTGACATTTCCAGCATG+GGG - chr1.1:17443130-17443149 MS.gene026523:CDS 40.0%
CAATGTTGACATTTCCAGCA+TGG - chr1.1:17443128-17443147 MS.gene026523:CDS 40.0%
CACAAAGCCAAAAGATTCTG+TGG - chr1.1:17442814-17442833 MS.gene026523:CDS 40.0%
CATGCTGGAAATGTCAACAT+TGG + chr1.1:17443130-17443149 None:intergenic 40.0%
CATTCACTTGTTCTTGTGGA+AGG + chr1.1:17442868-17442887 None:intergenic 40.0%
CTTATCTCATTTCCAGGACA+AGG - chr1.1:17442026-17442045 MS.gene026523:CDS 40.0%
GTAGGGATTAGATTGGGTTA+TGG - chr1.1:17443196-17443215 MS.gene026523:CDS 40.0%
GTCCTGGAAATGAGATAAGA+AGG + chr1.1:17442025-17442044 None:intergenic 40.0%
TCACAAACCCAAGGAACAAA+AGG + chr1.1:17442365-17442384 None:intergenic 40.0%
TCACTCATTCCAATAGGTGA+TGG - chr1.1:17442170-17442189 MS.gene026523:CDS 40.0%
TGAGCCAAAACTTCTTCTTG+TGG + chr1.1:17443037-17443056 None:intergenic 40.0%
TGTGATGTAGCTCATGAACA+TGG - chr1.1:17442380-17442399 MS.gene026523:intron 40.0%
TTAGAGGAAACAAGTGAGAG+AGG - chr1.1:17442992-17443011 MS.gene026523:CDS 40.0%
TTCATCAAGATTCCGATCAG+AGG + chr1.1:17443365-17443384 None:intergenic 40.0%
TTTAACCCTACTTCCTTAGG+AGG + chr1.1:17442947-17442966 None:intergenic 40.0%
! GAGTCCACAAGAAGAAGTTT+TGG - chr1.1:17443030-17443049 MS.gene026523:CDS 40.0%
!!! AGTTTTGGCTCATCCTTCAT+TGG - chr1.1:17443045-17443064 MS.gene026523:CDS 40.0%
GTAAGCAGCAAAAACTGCAG+TGG + chr1.1:17442435-17442454 None:intergenic 45.0%
GTGAGAGAACCATCACCTAT+TGG + chr1.1:17442182-17442201 None:intergenic 45.0%
TGAGCTACATCACAAACCCA+AGG + chr1.1:17442374-17442393 None:intergenic 45.0%
! AGCAAAGTGTCTTGCTGCAA+AGG - chr1.1:17442073-17442092 MS.gene026523:CDS 45.0%
! GCAAAGTGTCTTGCTGCAAA+GGG - chr1.1:17442074-17442093 MS.gene026523:CDS 45.0%
! GTTTCCTCTAAGAACCCATC+TGG + chr1.1:17442983-17443002 None:intergenic 45.0%
! TTTGCCAGATGGGTTCTTAG+AGG - chr1.1:17442976-17442995 MS.gene026523:CDS 45.0%
AACCCTACTTCCTTAGGAGG+TGG + chr1.1:17442944-17442963 None:intergenic 50.0%
AAGCCACCTCCTAAGGAAGT+AGG - chr1.1:17442938-17442957 MS.gene026523:CDS 50.0%
AGCCACCTCCTAAGGAAGTA+GGG - chr1.1:17442939-17442958 MS.gene026523:CDS 50.0%
CAAGTGGAAGAAAATGGCGG+AGG - chr1.1:17443318-17443337 MS.gene026523:CDS 50.0%
GGGTTTATGTGTCCTTGTCC+TGG + chr1.1:17442041-17442060 None:intergenic 50.0%
GGTACTAAAGCCACCTCCTA+AGG - chr1.1:17442931-17442950 MS.gene026523:CDS 50.0%
! CCATTGGTGGATCCTCTGAT+CGG - chr1.1:17443350-17443369 MS.gene026523:CDS 50.0%
CCGATCAGAGGATCCACCAA+TGG + chr1.1:17443353-17443372 None:intergenic 55.0%
GTGACTTGATCACCCCATGC+TGG + chr1.1:17443145-17443164 None:intergenic 55.0%
! GAAAATGGCGGAGGAAGCAG+TGG - chr1.1:17443327-17443346 MS.gene026523:CDS 55.0%
GAGGAAGCAGTGGCCATTGG+TGG - chr1.1:17443337-17443356 MS.gene026523:CDS 60.0%
GCGGAGGAAGCAGTGGCCAT+TGG - chr1.1:17443334-17443353 MS.gene026523:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 17441996 17443426 17441996 ID=MS.gene026523
chr1.1 mRNA 17441996 17443426 17441996 ID=MS.gene026523.t1;Parent=MS.gene026523
chr1.1 exon 17442418 17443426 17442418 ID=MS.gene026523.t1.exon1;Parent=MS.gene026523.t1
chr1.1 CDS 17442418 17443426 17442418 ID=cds.MS.gene026523.t1;Parent=MS.gene026523.t1
chr1.1 exon 17441996 17442276 17441996 ID=MS.gene026523.t1.exon2;Parent=MS.gene026523.t1
chr1.1 CDS 17441996 17442276 17441996 ID=cds.MS.gene026523.t1;Parent=MS.gene026523.t1
Gene Sequence

>MS.gene026523

ATGGGATCCAAAACTCCCATTCATATCCTTCTTATCTCATTTCCAGGACAAGGACACATAAACCCTCTTCTTAGATTAGCAAAGTGTCTTGCTGCAAAGGGTGCTTCTGTCATCTTCATCACAACAAAGAAAGCTGGCAAAGACATACAAACTGTTAACAACATTGTTGAAAAATCACTCATTCCAATAGGTGATGGTTCTCTCACTTTTGAGTTCTTTGATGATGGTTTAGAAGATGATGATCCTATTAGGGCAAATCTTTGTGACTACATAGAACAACTAAAACTTTTTGGGAAACCTTTTCTGTCTCAAATGATCAAGAATCATGTTGAGTCATTCAAACCTATTTCTTGTATCATAAACAATCCTTTTGTTCCTTGGGTTTGTGATGTAGCTCATGAACATGGTATTCCTTCTGTTTTATTATGGGTTCAATCCACTGCAGTTTTTGCTGCTTACTATAACTATTTCAACAAACTGGTACGTTTCCCTTCAGAAAAAGAACGTTATATTGATGTTCAATTACCTTTTCAAGTTCTTAAATACAATGAAATCCCAGATTTTCTTCATCCTTTTAGTCCATATCCATTTCTAGGGACACTCATCTTAGAACAGTTTAAGAATTTATCAAAAGTGTTTTGTGTTTTAGTAGAAACCTATGAAGAACTAGAGCATGATTTCATTGACTATATTTCAAAAAAATCAATCCACATAAGATCCATTGGTCCATTGTTTAAAAATCCAAATATTAAAGGTGCAAGTAATATTCGTGGTGATTTTGTTAAGAGTGATGATTGCAATATTATAGAGTGGCTAAACACAAAGCCAAAAGATTCTGTGGTTTATATTTCTTTTGGGACTATTGTGTACCTTCCACAAGAACAAGTGAATGAAATTGCATATGGGTTATTGGATTCTAATGTTTCATTTTTGTGGGTACTAAAGCCACCTCCTAAGGAAGTAGGGTTAAAAGAACATGTTTTGCCAGATGGGTTCTTAGAGGAAACAAGTGAGAGAGGAAAAGTTGTGAAATGGAGTCCACAAGAAGAAGTTTTGGCTCATCCTTCATTGGTATGTTTCATAACACATTGTGGTTGGAATTCTTCAATAGAAGCACTTAGTTTAGGAGTTCCAATGTTGACATTTCCAGCATGGGGTGATCAAGTCACAAATGCAAAGTTTTTGGTAGATGTTTTTGGTGTAGGGATTAGATTGGGTTATGGTATGATTGAAAATAAACTTGTAACAAGAGATGAGGTGAAAAAGTGCTTATTAGAAGCAACAATAGGGGAAAAAGCTGAGGATTTGAAGCAAAATGCAATCAAGTGGAAGAAAATGGCGGAGGAAGCAGTGGCCATTGGTGGATCCTCTGATCGGAATCTTGATGAATTTTTGGAAGACATTAAGAAAATCAAAATGATTGCACAATAA
Protein sequence

>MS.gene026523.t1

MGSKTPIHILLISFPGQGHINPLLRLAKCLAAKGASVIFITTKKAGKDIQTVNNIVEKSLIPIGDGSLTFEFFDDGLEDDDPIRANLCDYIEQLKLFGKPFLSQMIKNHVESFKPISCIINNPFVPWVCDVAHEHGIPSVLLWVQSTAVFAAYYNYFNKLVRFPSEKERYIDVQLPFQVLKYNEIPDFLHPFSPYPFLGTLILEQFKNLSKVFCVLVETYEELEHDFIDYISKKSIHIRSIGPLFKNPNIKGASNIRGDFVKSDDCNIIEWLNTKPKDSVVYISFGTIVYLPQEQVNEIAYGLLDSNVSFLWVLKPPPKEVGLKEHVLPDGFLEETTWGDQVTNAKFLVDVFGVGIRLGYGMIENKLVTRDEVKKCLLEATIGEKAEDLKQNAIKWKKMAEEAVAIGGSSDRNLDEFLEDIKKIKMIAQ