AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene86118

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene86118.t1 MTR_6g013440 85.386 479 70 0 1 479 1 479 0.0 863
MS.gene86118.t1 MTR_6g014300 86.458 480 48 2 1 479 1 464 0.0 857
MS.gene86118.t1 MTR_6g014310 80.376 479 94 0 1 479 1 479 0.0 794
MS.gene86118.t1 MTR_6g014040 77.637 474 105 1 7 479 6 479 0.0 777
MS.gene86118.t1 MTR_6g014020 76.827 479 110 1 1 479 1 478 0.0 776
MS.gene86118.t1 MTR_6g014150 78.858 473 100 0 7 479 3 475 0.0 775
MS.gene86118.t1 MTR_6g014050 78.706 479 102 0 1 479 1 479 0.0 771
MS.gene86118.t1 MTR_6g014270 76.632 475 109 1 7 479 3 477 0.0 768
MS.gene86118.t1 MTR_6g014200 77.590 473 106 0 7 479 3 475 0.0 761
MS.gene86118.t1 MTR_3g008010 76.250 480 109 3 1 479 1 476 0.0 758
MS.gene86118.t1 MTR_0288s0020 76.337 486 93 3 1 485 1 465 0.0 754
MS.gene86118.t1 MTR_6g013450 74.583 480 120 2 1 479 1 479 0.0 754
MS.gene86118.t1 MTR_6g014290 74.583 480 117 3 1 479 1 476 0.0 751
MS.gene86118.t1 MTR_6g014250 75.417 480 113 3 1 479 1 476 0.0 746
MS.gene86118.t1 MTR_8g059425 75.365 479 115 3 1 479 1 476 0.0 741
MS.gene86118.t1 MTR_6g014220 74.583 480 117 3 1 479 1 476 0.0 741
MS.gene86118.t1 MTR_7g011470 76.409 479 98 2 1 479 1 464 0.0 736
MS.gene86118.t1 MTR_6g014187 73.278 479 127 1 1 479 1 478 0.0 734
MS.gene86118.t1 MTR_6g011340 75.157 479 118 1 1 479 1 478 0.0 732
MS.gene86118.t1 MTR_6g014170 75.625 480 96 4 1 479 1 460 0.0 731
MS.gene86118.t1 MTR_6g013960 73.069 479 128 1 1 479 1 478 0.0 731
MS.gene86118.t1 MTR_7g011470 75.574 479 98 2 1 479 1 460 0.0 725
MS.gene86118.t1 MTR_5g058320 72.246 472 114 2 9 479 8 463 0.0 710
MS.gene86118.t1 MTR_6g013900 72.025 479 132 2 1 479 1 477 0.0 701
MS.gene86118.t1 MTR_6g013990 71.608 479 133 2 1 479 1 476 0.0 691
MS.gene86118.t1 MTR_6g013920 69.937 479 142 2 1 479 1 477 0.0 682
MS.gene86118.t1 MTR_6g014186 69.767 473 105 1 7 479 3 437 0.0 679
MS.gene86118.t1 MTR_6g014240 71.186 472 106 2 8 479 4 445 0.0 672
MS.gene86118.t1 MTR_6g013680 72.642 424 64 3 56 479 2 373 0.0 611
MS.gene86118.t1 MTR_5g464810 56.688 471 196 5 11 479 12 476 0.0 548
MS.gene86118.t1 MTR_5g064240 56.688 471 196 5 11 479 12 476 0.0 548
MS.gene86118.t1 MTR_0036s0220 56.144 472 199 5 10 479 11 476 0.0 545
MS.gene86118.t1 MTR_8g043470 64.524 420 97 3 60 479 9 376 0.0 541
MS.gene86118.t1 MTR_5g464760 55.814 473 199 6 9 477 10 476 0.0 536
MS.gene86118.t1 MTR_2g008210 54.244 483 209 5 1 479 1 475 0.0 528
MS.gene86118.t1 MTR_6g014160 57.173 474 116 5 6 479 5 391 0.0 515
MS.gene86118.t1 MTR_0477s0010 71.831 355 65 2 132 485 1 321 3.25e-180 510
MS.gene86118.t1 MTR_3g079480 50.000 476 230 4 7 479 17 487 1.22e-168 488
MS.gene86118.t1 MTR_3g479520 48.319 476 238 4 7 479 11 481 3.49e-166 481
MS.gene86118.t1 MTR_3g479490 48.529 476 237 4 7 479 2 472 2.39e-165 479
MS.gene86118.t1 MTR_6g013435 68.768 349 64 4 132 479 1 305 7.55e-160 458
MS.gene86118.t1 MTR_6g014190 73.333 285 76 0 195 479 1 285 9.96e-159 454
MS.gene86118.t1 MTR_4g094220 47.679 474 240 4 9 477 5 475 6.16e-155 452
MS.gene86118.t1 MTR_3g479470 47.718 482 243 5 1 479 3 478 4.00e-154 450
MS.gene86118.t1 MTR_6g014185 51.732 433 98 7 48 479 21 343 1.37e-129 383
MS.gene86118.t1 MTR_8g007585 66.667 273 80 4 213 479 123 390 2.03e-120 361
MS.gene86118.t1 MTR_8g007585 67.526 194 58 3 1 194 1 189 2.66e-85 270
MS.gene86118.t1 MTR_0199s0010 66.667 249 78 3 1 249 1 244 9.36e-114 339
MS.gene86118.t1 MTR_3g479610 51.466 307 146 2 176 479 5 311 1.42e-110 333
MS.gene86118.t1 MTR_6g014195 79.592 196 39 1 1 196 1 195 1.24e-107 321
MS.gene86118.t1 MTR_6g013890 58.088 272 59 4 176 446 23 240 1.40e-103 312
MS.gene86118.t1 MTR_0891s0010 48.611 288 145 2 195 479 1 288 7.52e-101 307
MS.gene86118.t1 MTR_5g031840 35.084 476 282 12 10 478 4 459 3.56e-92 290
MS.gene86118.t1 MTR_3g069710 37.764 474 251 13 13 479 14 450 5.65e-92 290
MS.gene86118.t1 MTR_5g031860 34.519 478 283 12 10 478 11 467 2.28e-87 278
MS.gene86118.t1 MTR_5g066390 77.564 156 35 0 324 479 58 213 1.27e-85 265
MS.gene86118.t1 MTR_5g031830 32.573 482 296 9 6 478 7 468 1.65e-84 271
MS.gene86118.t1 MTR_3g069690 33.613 476 280 12 6 477 3 446 4.83e-82 264
MS.gene86118.t1 MTR_4g064987 33.191 467 272 12 13 472 10 443 1.45e-75 247
MS.gene86118.t1 MTR_1g107380 30.143 491 289 11 11 479 13 471 2.08e-71 236
MS.gene86118.t1 MTR_4g064987 32.692 468 267 14 13 472 10 437 4.38e-71 235
MS.gene86118.t1 MTR_7g013240 30.508 472 284 11 10 477 5 436 6.61e-70 231
MS.gene86118.t1 MTR_7g013180 30.208 480 281 14 10 477 4 441 1.09e-68 228
MS.gene86118.t1 MTR_7g013260 30.655 473 283 12 10 477 5 437 4.28e-67 224
MS.gene86118.t1 MTR_2086s0010 56.471 170 73 1 311 479 1 170 1.15e-66 214
MS.gene86118.t1 MTR_1996s0010 56.471 170 73 1 311 479 1 170 1.15e-66 214
MS.gene86118.t1 MTR_5g035580 29.835 486 282 14 7 477 9 450 1.22e-66 224
MS.gene86118.t1 MTR_5g072860 32.008 478 273 15 11 473 18 458 2.95e-66 223
MS.gene86118.t1 MTR_7g013200 30.889 450 271 11 10 455 4 417 4.89e-66 221
MS.gene86118.t1 MTR_1g107350 29.363 487 299 13 11 479 8 467 8.33e-65 219
MS.gene86118.t1 MTR_6g038240 29.253 482 297 12 7 479 7 453 9.58e-65 218
MS.gene86118.t1 MTR_0475s0020 78.947 133 26 2 1 132 1 132 1.44e-64 210
MS.gene86118.t1 MTR_7g080940 30.213 470 290 12 9 473 9 445 8.49e-64 216
MS.gene86118.t1 MTR_5g035560 29.835 486 294 14 1 477 1 448 1.17e-63 217
MS.gene86118.t1 MTR_7g080935 30.426 470 289 12 9 473 9 445 2.28e-63 215
MS.gene86118.t1 MTR_6g014000 73.228 127 34 0 352 478 27 153 2.35e-63 216
MS.gene86118.t1 MTR_7g013220 29.935 461 278 11 10 458 4 431 2.65e-63 214
MS.gene86118.t1 MTR_4g095008 28.163 490 314 12 1 479 1 463 1.31e-62 215
MS.gene86118.t1 MTR_6g038230 28.778 483 294 13 7 477 7 451 5.40e-62 211
MS.gene86118.t1 MTR_8g064870 28.106 491 298 13 13 479 13 472 6.12e-62 212
MS.gene86118.t1 MTR_7g080950 27.848 474 304 11 9 477 4 444 1.09e-60 207
MS.gene86118.t1 MTR_3g049970 28.306 484 308 12 11 479 9 468 2.80e-60 207
MS.gene86118.t1 MTR_4g094920 29.757 494 303 16 1 479 14 478 3.03e-60 207
MS.gene86118.t1 MTR_1g032490 28.423 482 310 11 11 479 10 469 1.12e-59 205
MS.gene86118.t1 MTR_6g038300 28.243 478 306 11 10 481 10 456 1.15e-59 205
MS.gene86118.t1 MTR_1g107315 29.268 492 314 13 11 490 8 477 2.82e-59 204
MS.gene86118.t1 MTR_6g038220 28.247 485 293 11 7 477 7 450 7.59e-59 202
MS.gene86118.t1 MTR_1g107365 28.513 491 299 13 4 479 37 490 1.80e-58 203
MS.gene86118.t1 MTR_5g016480 28.657 499 303 13 4 479 1 469 2.29e-58 202
MS.gene86118.t1 MTR_6g038200 27.975 479 303 12 7 477 7 451 9.85e-58 199
MS.gene86118.t1 MTR_8g088560 29.436 479 296 15 11 479 10 456 3.23e-57 198
MS.gene86118.t1 MTR_1g107360 28.400 500 294 16 4 479 1 460 1.16e-56 197
MS.gene86118.t1 MTR_5g072810 28.778 483 288 12 11 479 12 452 5.90e-56 195
MS.gene86118.t1 MTR_7g070610 29.688 512 278 15 11 479 13 485 1.35e-55 195
MS.gene86118.t1 MTR_3g084530 28.776 490 304 13 11 479 6 471 1.77e-55 194
MS.gene86118.t1 MTR_8g064880 27.802 464 288 13 13 454 11 449 3.32e-55 194
MS.gene86118.t1 MTR_3g084520 30.785 484 290 16 11 473 6 465 3.48e-55 193
MS.gene86118.t1 MTR_1g107375 27.235 481 302 13 11 479 8 452 1.35e-54 191
MS.gene86118.t1 MTR_7g117405 30.099 505 288 17 7 479 8 479 3.79e-54 191
MS.gene86118.t1 MTR_5g075440 29.482 502 264 18 11 479 10 454 7.61e-54 189
MS.gene86118.t1 MTR_8g083290 29.752 484 291 17 10 473 2 456 9.82e-54 189
MS.gene86118.t1 MTR_7g071040 29.492 512 299 16 1 479 7 489 2.18e-53 189
MS.gene86118.t1 MTR_3g084540 28.484 488 309 13 11 479 6 472 2.50e-52 186
MS.gene86118.t1 MTR_5g072830 27.347 490 297 14 4 479 3 447 2.50e-51 182
MS.gene86118.t1 MTR_4g024020 29.741 501 289 15 9 473 7 480 4.74e-51 182
MS.gene86118.t1 MTR_6g033725 29.859 355 211 8 137 476 126 457 4.90e-51 182
MS.gene86118.t1 MTR_7g055710 29.240 513 278 19 11 479 11 482 6.44e-51 182
MS.gene86118.t1 MTR_5g098960 27.948 458 286 14 8 458 4 424 2.56e-50 180
MS.gene86118.t1 MTR_6g033615 32.778 360 190 12 144 484 131 457 4.31e-50 179
MS.gene86118.t1 MTR_5g072840 27.551 490 296 14 4 479 3 447 4.38e-50 179
MS.gene86118.t1 MTR_1g107285 27.835 485 300 14 13 479 10 462 5.90e-50 179
MS.gene86118.t1 MTR_7g102450 27.992 518 286 15 1 479 1 470 6.71e-50 179
MS.gene86118.t1 MTR_5g045960 28.032 503 311 14 6 479 4 484 1.14e-49 179
MS.gene86118.t1 MTR_6g033625 29.919 371 222 7 123 478 115 462 1.82e-49 177
MS.gene86118.t1 MTR_6g033660 30.056 356 208 9 137 476 129 459 3.22e-49 177
MS.gene86118.t1 MTR_0184s0030 27.236 492 298 14 8 473 3 460 2.49e-48 175
MS.gene86118.t1 MTR_7g070740 27.938 519 297 18 1 479 1 482 3.41e-48 175
MS.gene86118.t1 MTR_4g128720 27.975 479 300 12 8 478 12 453 3.48e-48 174
MS.gene86118.t1 MTR_7g070660 28.008 507 288 15 11 479 11 478 8.18e-48 174
MS.gene86118.t1 MTR_7g046490 33.981 309 164 8 192 477 169 460 9.57e-48 173
MS.gene86118.t1 MTR_5g072820 27.536 483 291 14 11 479 10 447 1.37e-47 172
MS.gene86118.t1 MTR_7g070930 28.460 513 291 17 7 479 10 486 1.72e-47 173
MS.gene86118.t1 MTR_8g006710 35.354 297 161 10 192 469 170 454 2.13e-47 172
MS.gene86118.t1 MTR_4g108250 27.115 520 304 15 1 479 1 486 2.42e-47 172
MS.gene86118.t1 MTR_4g485630 27.745 501 303 16 6 479 4 472 3.28e-47 172
MS.gene86118.t1 MTR_7g080900 27.215 474 303 17 8 473 9 448 6.03e-47 171
MS.gene86118.t1 MTR_4g128690 28.025 471 301 11 11 478 15 450 1.12e-46 170
MS.gene86118.t1 MTR_7g070800 26.892 502 301 16 11 479 6 474 1.80e-46 170
MS.gene86118.t1 MTR_1g062380 27.379 515 290 17 11 479 16 492 1.90e-46 170
MS.gene86118.t1 MTR_8g077590 30.851 376 215 11 122 476 111 462 3.35e-46 169
MS.gene86118.t1 MTR_7g070860 27.273 506 290 17 6 479 2 461 3.46e-46 169
MS.gene86118.t1 MTR_4g008630 27.586 493 288 16 13 481 16 463 6.14e-46 168
MS.gene86118.t1 MTR_3g479620 47.929 169 83 2 7 175 2 165 6.36e-46 159
MS.gene86118.t1 MTR_8g009073 35.254 295 160 8 192 467 40 322 7.56e-46 164
MS.gene86118.t1 MTR_3g031450 26.931 479 292 13 11 478 18 449 8.96e-46 168
MS.gene86118.t1 MTR_6g033675 26.543 486 304 14 14 476 5 460 2.12e-45 167
MS.gene86118.t1 MTR_7g070910 27.470 506 317 13 1 479 1 483 2.35e-45 167
MS.gene86118.t1 MTR_6g005600 28.313 498 283 17 9 473 4 460 2.43e-45 166
MS.gene86118.t1 MTR_8g083280 28.056 499 292 18 13 485 9 466 3.58e-45 166
MS.gene86118.t1 MTR_8g009073 35.254 295 160 8 192 467 169 451 4.28e-45 166
MS.gene86118.t1 MTR_7g070780 27.701 509 291 17 11 479 11 482 4.53e-45 166
MS.gene86118.t1 MTR_5g040030 27.092 502 322 12 2 479 5 486 5.40e-45 166
MS.gene86118.t1 MTR_0184s0040 26.931 505 293 17 8 479 18 479 6.17e-45 166
MS.gene86118.t1 MTR_0078s0190 26.931 505 293 17 8 479 18 479 6.17e-45 166
MS.gene86118.t1 MTR_7g102490 26.772 508 314 13 5 479 3 485 1.94e-44 165
MS.gene86118.t1 MTR_8g027885 28.719 484 282 15 10 469 17 461 2.63e-44 164
MS.gene86118.t1 MTR_3g031400 26.875 480 289 15 11 478 18 447 2.75e-44 164
MS.gene86118.t1 MTR_8g090095 27.495 491 289 16 17 481 31 480 2.76e-44 164
MS.gene86118.t1 MTR_8g027870 27.869 488 281 16 10 469 17 461 3.12e-44 164
MS.gene86118.t1 MTR_7g117170 29.693 522 270 22 10 487 14 482 3.29e-44 164
MS.gene86118.t1 MTR_5g045970 27.165 508 299 17 11 479 16 491 4.53e-44 164
MS.gene86118.t1 MTR_8g009050 30.366 382 212 10 122 476 108 462 5.94e-44 162
MS.gene86118.t1 MTR_1g019510 30.319 376 218 10 121 476 108 459 9.70e-44 162
MS.gene86118.t1 MTR_6g023665 28.600 493 279 16 8 469 10 460 1.05e-43 162
MS.gene86118.t1 MTR_8g006730 33.670 297 166 10 192 469 171 455 1.48e-43 161
MS.gene86118.t1 MTR_7g102460 27.559 508 308 17 5 479 3 483 2.35e-43 162
MS.gene86118.t1 MTR_7g102550 28.320 512 300 15 5 479 3 484 4.31e-43 160
MS.gene86118.t1 MTR_1g029540 25.926 486 294 15 17 481 20 460 4.36e-43 160
MS.gene86118.t1 MTR_8g006260 27.789 493 288 17 9 470 4 459 6.70e-43 160
MS.gene86118.t1 MTR_7g070810 25.800 500 306 16 11 479 9 474 6.79e-43 160
MS.gene86118.t1 MTR_7g102560 26.627 507 313 17 6 479 2 482 6.95e-43 160
MS.gene86118.t1 MTR_0009s0240 28.980 490 292 17 7 477 3 455 7.17e-43 159
MS.gene86118.t1 MTR_8g009067 29.894 378 225 9 119 477 105 461 7.97e-43 159
MS.gene86118.t1 MTR_8g066610 27.530 494 307 18 11 479 9 476 9.96e-43 159
MS.gene86118.t1 MTR_8g008970 29.708 377 225 9 119 476 105 460 2.92e-42 162
MS.gene86118.t1 MTR_8g008970 32.157 255 151 5 230 476 544 784 6.30e-30 125
MS.gene86118.t1 MTR_8g009067 30.168 358 210 9 139 477 7 343 3.01e-42 155
MS.gene86118.t1 MTR_7g070940 27.115 520 283 19 5 479 3 471 9.99e-42 157
MS.gene86118.t1 MTR_8g009055 28.912 377 224 9 122 476 108 462 1.21e-41 156
MS.gene86118.t1 MTR_5g070090 31.200 375 215 13 123 481 115 462 1.53e-41 156
MS.gene86118.t1 MTR_8g008990 30.203 394 228 13 108 476 93 464 1.53e-41 156
MS.gene86118.t1 MTR_5g016660 28.046 517 292 19 6 479 3 482 3.91e-41 155
MS.gene86118.t1 MTR_8g465670 26.786 504 299 16 6 477 2 467 3.94e-41 155
MS.gene86118.t1 MTR_5g087620 26.654 514 305 21 8 478 7 491 3.95e-41 155
MS.gene86118.t1 MTR_8g012745 30.667 375 215 11 122 473 109 461 6.56e-41 154
MS.gene86118.t1 MTR_8g071070 28.106 491 307 16 7 478 3 466 8.00e-41 154
MS.gene86118.t1 MTR_8g012650 31.733 375 206 12 122 469 109 460 2.80e-40 152
MS.gene86118.t1 MTR_6g488280 31.650 297 171 9 192 469 170 453 4.37e-40 152
MS.gene86118.t1 MTR_0428s0010 31.650 297 171 9 192 469 170 453 4.37e-40 152
MS.gene86118.t1 MTR_8g012635 31.496 381 207 14 122 473 109 464 5.03e-40 152
MS.gene86118.t1 MTR_8g009063 28.389 391 237 8 108 476 100 469 6.61e-40 152
MS.gene86118.t1 MTR_1g040310 26.824 507 292 16 12 479 16 482 7.26e-40 152
MS.gene86118.t1 MTR_4g485620 28.690 481 287 19 25 479 3 453 5.59e-39 149
MS.gene86118.t1 MTR_8g074550 26.437 522 293 21 8 478 5 486 6.78e-39 149
MS.gene86118.t1 MTR_4g117960 26.600 500 299 16 14 479 14 479 9.78e-39 148
MS.gene86118.t1 MTR_5g090670 27.132 516 307 18 8 491 2 480 3.14e-38 147
MS.gene86118.t1 MTR_7g047030 26.087 483 285 19 8 459 3 444 3.22e-38 147
MS.gene86118.t1 MTR_7g047270 26.087 483 285 19 8 459 3 444 3.22e-38 147
MS.gene86118.t1 MTR_4g031800 26.069 491 303 13 14 477 12 469 8.72e-38 145
MS.gene86118.t1 MTR_2g034990 27.108 498 300 15 14 479 14 480 1.30e-37 145
MS.gene86118.t1 MTR_5g067170 26.559 497 302 15 14 479 14 478 1.99e-37 145
MS.gene86118.t1 MTR_0078s0060 32.014 278 156 9 202 459 179 443 3.04e-37 144
MS.gene86118.t1 MTR_7g102520 26.815 496 316 15 11 479 12 487 3.31e-37 144
MS.gene86118.t1 MTR_7g071050 26.680 491 247 16 7 462 9 421 7.31e-37 142
MS.gene86118.t1 MTR_5g090630 26.800 500 297 15 8 477 2 462 1.09e-36 142
MS.gene86118.t1 MTR_6g035185 25.050 503 305 15 14 479 14 481 2.37e-36 142
MS.gene86118.t1 MTR_8g044140 31.650 297 178 9 203 479 156 447 2.60e-36 141
MS.gene86118.t1 MTR_5g039900 25.595 504 324 13 2 479 4 482 2.63e-36 142
MS.gene86118.t1 MTR_0078s0010 24.689 482 293 15 8 459 3 444 3.32e-36 141
MS.gene86118.t1 MTR_2g035020 25.755 497 308 14 14 479 14 480 3.51e-36 141
MS.gene86118.t1 MTR_4g485640 34.252 254 133 8 257 485 427 671 4.13e-36 143
MS.gene86118.t1 MTR_5g090620 23.913 506 314 14 8 477 2 472 4.92e-36 140
MS.gene86118.t1 MTR_2g046820 28.680 394 226 10 111 481 102 463 6.44e-36 140
MS.gene86118.t1 MTR_6g035265 26.210 496 303 15 14 481 14 474 7.27e-36 140
MS.gene86118.t1 MTR_2g046750 25.845 503 304 14 9 481 3 466 1.50e-35 139
MS.gene86118.t1 MTR_8g006270 25.000 504 306 17 8 481 3 464 1.77e-35 139
MS.gene86118.t1 MTR_6g035295 25.536 513 317 16 1 479 2 483 1.88e-35 139
MS.gene86118.t1 MTR_5g090700 28.792 389 221 14 121 477 109 473 2.57e-35 139
MS.gene86118.t1 MTR_5g004940 34.361 227 127 3 285 509 193 399 3.48e-35 137
MS.gene86118.t1 MTR_4g117890 26.157 497 293 14 14 477 16 471 3.50e-35 138
MS.gene86118.t1 MTR_2g040530 27.013 385 224 9 123 481 112 465 5.99e-35 137
MS.gene86118.t1 MTR_3g009510 27.013 385 232 12 123 478 110 474 6.50e-35 137
MS.gene86118.t1 MTR_5g090660 25.845 503 305 19 8 477 2 469 1.01e-34 138
MS.gene86118.t1 MTR_5g019580 26.121 513 301 17 7 479 3 477 1.10e-34 137
MS.gene86118.t1 MTR_8g012630 36.139 202 109 4 288 469 203 404 1.57e-34 135
MS.gene86118.t1 MTR_0536s0020 26.157 497 297 13 14 479 21 478 1.71e-34 136
MS.gene86118.t1 MTR_8g012730 37.566 189 98 4 291 459 99 287 2.50e-34 132
MS.gene86118.t1 MTR_8g006220 26.978 493 269 17 8 454 3 450 2.74e-34 135
MS.gene86118.t1 MTR_5g072850 31.655 278 165 8 163 436 91 347 3.17e-34 134
MS.gene86118.t1 MTR_2g098430 24.853 511 306 16 8 477 3 476 3.90e-34 135
MS.gene86118.t1 MTR_5g090580 26.190 504 304 18 8 477 2 471 4.08e-34 135
MS.gene86118.t1 MTR_4g485590 28.205 429 242 18 11 426 9 384 6.03e-34 133
MS.gene86118.t1 MTR_4g082820 26.761 497 295 15 11 479 7 462 7.47e-34 134
MS.gene86118.t1 MTR_2g059240 26.186 485 322 14 6 479 8 467 8.84e-34 134
MS.gene86118.t1 MTR_8g466240 27.664 488 295 21 10 479 5 452 9.87e-34 134
MS.gene86118.t1 MTR_4g117950 27.383 493 291 18 14 479 9 461 1.34e-33 134
MS.gene86118.t1 MTR_5g098930 25.692 506 297 20 8 477 2 464 1.36e-33 134
MS.gene86118.t1 MTR_1g019520 34.615 208 119 4 286 476 1 208 1.62e-33 127
MS.gene86118.t1 MTR_2g035040 27.937 383 227 12 125 479 24 385 1.66e-33 132
MS.gene86118.t1 MTR_5g019580 35.514 214 114 4 289 479 289 501 3.08e-33 133
MS.gene86118.t1 MTR_7g012120 26.707 498 299 17 14 479 19 482 5.00e-33 132
MS.gene86118.t1 MTR_7g470610 30.921 304 165 11 134 427 5 273 7.48e-33 127
MS.gene86118.t1 MTR_7g070583 30.921 304 165 11 134 427 5 273 7.48e-33 127
MS.gene86118.t1 MTR_5g070040 32.130 277 146 9 224 477 206 463 8.67e-33 131
MS.gene86118.t1 MTR_7g067120 27.074 458 269 14 8 457 6 406 2.52e-32 129
MS.gene86118.t1 MTR_8g007565 27.155 464 287 18 11 454 7 439 3.17e-32 129
MS.gene86118.t1 MTR_8g007650 27.155 464 287 18 11 454 7 439 5.63e-32 129
MS.gene86118.t1 MTR_7g067330 25.647 464 272 13 6 457 4 406 9.74e-32 127
MS.gene86118.t1 MTR_7g070870 25.917 436 243 16 21 427 29 413 1.36e-31 128
MS.gene86118.t1 MTR_5g090600 25.152 493 302 16 8 477 2 450 2.77e-31 127
MS.gene86118.t1 MTR_5g029800 25.407 492 312 11 14 479 14 476 4.51e-31 126
MS.gene86118.t1 MTR_7g039550 31.933 238 147 3 257 479 23 260 8.38e-31 121
MS.gene86118.t1 MTR_4g117980 25.697 502 302 18 14 479 14 480 1.30e-30 125
MS.gene86118.t1 MTR_5g090610 24.663 519 300 21 8 491 2 464 1.85e-30 124
MS.gene86118.t1 MTR_4g118000 24.701 502 291 16 14 479 15 465 2.72e-30 124
MS.gene86118.t1 MTR_0536s0010 26.210 496 292 17 14 479 24 475 4.95e-30 123
MS.gene86118.t1 MTR_4g082810 28.525 305 184 10 124 413 110 395 8.33e-30 122
MS.gene86118.t1 MTR_8g032950 29.153 295 182 7 210 479 187 479 3.66e-29 121
MS.gene86118.t1 MTR_6g078320 24.655 507 305 19 11 479 11 478 9.53e-29 120
MS.gene86118.t1 MTR_5g066410 26.293 464 270 19 14 454 1 415 1.11e-28 119
MS.gene86118.t1 MTR_8g009840 35.751 193 102 5 304 476 331 521 2.92e-28 119
MS.gene86118.t1 MTR_6g042310 25.490 459 301 15 8 457 15 441 1.82e-27 115
MS.gene86118.t1 MTR_6g036650 25.053 475 294 16 6 457 13 448 2.42e-27 115
MS.gene86118.t1 MTR_2g008226 27.813 471 293 19 7 458 6 448 3.75e-27 115
MS.gene86118.t1 MTR_5g027210 29.885 261 135 10 232 460 212 456 9.08e-27 114
MS.gene86118.t1 MTR_0475s0030 69.841 63 19 0 375 437 13 75 1.04e-25 101
MS.gene86118.t1 MTR_3g009490 33.514 185 101 5 315 478 3 186 2.18e-25 103
MS.gene86118.t1 MTR_1g107325 37.500 128 74 1 358 479 224 351 6.19e-25 107
MS.gene86118.t1 MTR_4g123553 24.783 460 306 16 7 457 10 438 1.12e-24 107
MS.gene86118.t1 MTR_7g070760 29.018 224 130 4 202 423 5 201 2.52e-24 101
MS.gene86118.t1 MTR_8g068360 23.640 478 297 15 6 456 7 443 3.06e-24 106
MS.gene86118.t1 MTR_2g008225 25.157 477 290 20 6 457 9 443 7.03e-24 105
MS.gene86118.t1 MTR_7g080960 24.304 539 273 20 8 482 9 476 3.47e-23 103
MS.gene86118.t1 MTR_8g068330 24.468 470 304 16 6 456 3 440 6.83e-23 102
MS.gene86118.t1 MTR_2g008220 24.211 475 297 19 6 457 8 442 1.32e-22 101
MS.gene86118.t1 MTR_8g068340 23.922 464 314 14 6 456 7 444 6.54e-22 99.4
MS.gene86118.t1 MTR_8g056740 39.007 141 77 3 287 423 166 301 7.80e-22 98.2
MS.gene86118.t1 MTR_7g070995 36.429 140 74 3 355 479 4 143 2.47e-21 91.3
MS.gene86118.t1 MTR_5g058330 69.841 63 18 1 213 274 8 70 4.42e-21 87.8
MS.gene86118.t1 MTR_3g435310 31.461 178 113 4 286 457 223 397 5.94e-21 95.9
MS.gene86118.t1 MTR_1g090270 24.027 437 280 14 6 431 10 405 4.08e-20 93.6
MS.gene86118.t1 MTR_4g079250 27.138 269 172 8 183 444 169 420 6.30e-20 93.2
MS.gene86118.t1 MTR_6g013970 37.000 200 86 9 131 312 38 215 2.31e-19 87.4
MS.gene86118.t1 MTR_4g077960 28.571 231 150 7 234 457 193 415 6.29e-19 90.1
MS.gene86118.t1 MTR_2g046620 29.213 178 117 4 286 457 265 439 4.26e-18 87.4
MS.gene86118.t1 MTR_0536s0030 33.987 153 80 5 346 479 200 350 8.16e-18 85.5
MS.gene86118.t1 MTR_5g090690 25.857 321 174 8 84 391 36 305 1.66e-17 85.1
MS.gene86118.t1 MTR_4g079270 28.169 213 135 5 217 424 197 396 1.82e-17 85.5
MS.gene86118.t1 MTR_0078s0200 24.629 337 211 10 8 335 3 305 2.87e-17 83.2
MS.gene86118.t1 MTR_2g014900 26.496 234 145 8 227 448 206 424 4.26e-17 84.3
MS.gene86118.t1 MTR_4g059370 28.302 212 127 7 222 424 133 328 9.43e-17 82.8
MS.gene86118.t1 MTR_6g015160 54.717 53 23 1 375 426 30 82 2.56e-13 66.2
MS.gene86118.t1 MTR_2g083490 29.075 227 133 9 230 444 210 420 4.22e-13 72.0
MS.gene86118.t1 MTR_8g006230 22.917 240 159 6 123 358 52 269 1.04e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene86118.t1 AT1G22340 53.165 474 213 5 8 477 10 478 0.0 528
MS.gene86118.t1 AT1G22360 53.684 475 212 5 8 479 7 476 0.0 521
MS.gene86118.t1 AT1G22380 50.505 495 230 5 3 494 5 487 3.30e-180 517
MS.gene86118.t1 AT1G22400 52.510 478 218 6 6 479 8 480 1.05e-179 516
MS.gene86118.t1 AT1G22360 52.211 475 207 6 8 479 7 464 3.18e-173 498
MS.gene86118.t1 AT1G22370 52.521 476 213 5 7 479 9 474 2.74e-172 496
MS.gene86118.t1 AT1G78270 50.000 482 231 7 5 482 7 482 2.22e-171 494
MS.gene86118.t1 AT1G22370 52.349 298 139 2 185 479 7 304 1.39e-105 320
MS.gene86118.t1 AT3G11340 35.095 473 265 11 9 477 7 441 1.12e-90 286
MS.gene86118.t1 AT5G59590 35.639 477 263 14 8 477 7 446 1.35e-87 278
MS.gene86118.t1 AT5G59580 35.504 476 262 14 9 477 7 444 1.30e-83 268
MS.gene86118.t1 AT3G46670 34.746 472 268 13 11 477 9 445 9.42e-82 263
MS.gene86118.t1 AT5G05860 33.192 473 267 11 11 474 9 441 7.77e-80 258
MS.gene86118.t1 AT5G05880 33.121 471 278 10 11 477 8 445 7.42e-79 255
MS.gene86118.t1 AT5G05890 33.333 474 277 10 11 477 8 449 7.34e-78 253
MS.gene86118.t1 AT5G05900 33.051 472 276 12 11 477 8 444 4.32e-77 251
MS.gene86118.t1 AT5G38010 33.817 482 275 11 6 478 5 451 8.48e-77 250
MS.gene86118.t1 AT3G46660 32.787 488 281 15 1 477 1 452 1.09e-75 247
MS.gene86118.t1 AT3G46690 33.193 476 279 10 8 478 6 447 4.01e-75 246
MS.gene86118.t1 AT5G05870 32.716 486 286 10 11 484 8 464 4.66e-75 246
MS.gene86118.t1 AT2G36970 32.114 492 291 13 5 479 4 469 1.24e-74 245
MS.gene86118.t1 AT5G38040 33.833 467 263 13 20 478 19 447 1.83e-74 244
MS.gene86118.t1 AT3G46680 33.333 486 263 14 8 477 6 446 2.65e-73 241
MS.gene86118.t1 AT3G46650 32.112 464 258 12 9 467 8 419 4.81e-71 234
MS.gene86118.t1 AT2G28080 33.120 468 279 12 15 473 22 464 5.94e-71 236
MS.gene86118.t1 AT3G46700 31.753 485 277 12 8 482 6 446 3.95e-70 232
MS.gene86118.t1 AT3G55700 32.777 479 281 16 6 477 3 447 6.82e-70 232
MS.gene86118.t1 AT3G21560 29.268 492 295 13 10 479 11 471 1.12e-68 230
MS.gene86118.t1 AT3G46720 31.513 476 280 11 6 477 4 437 1.20e-66 223
MS.gene86118.t1 AT3G55710 31.743 482 286 17 6 477 3 451 1.66e-65 221
MS.gene86118.t1 AT4G15490 28.486 502 296 15 7 482 4 468 1.14e-64 219
MS.gene86118.t1 AT4G15480 27.869 488 304 10 11 479 19 477 1.20e-64 219
MS.gene86118.t1 AT2G26480 29.461 482 292 12 4 477 1 442 2.36e-63 214
MS.gene86118.t1 AT3G02100 28.992 476 301 12 9 477 11 456 3.02e-63 214
MS.gene86118.t1 AT1G05680 30.083 482 296 13 11 485 6 453 3.42e-62 211
MS.gene86118.t1 AT1G05675 29.536 474 297 11 11 477 6 449 2.51e-61 209
MS.gene86118.t1 AT2G31790 30.346 491 287 13 4 477 1 453 5.15e-61 208
MS.gene86118.t1 AT2G31750 27.778 486 308 12 4 479 1 453 5.64e-61 208
MS.gene86118.t1 AT2G31750 27.778 486 308 12 4 479 1 453 8.79e-61 209
MS.gene86118.t1 AT4G15500 28.067 481 304 10 10 477 8 459 5.31e-60 206
MS.gene86118.t1 AT2G43820 29.106 481 293 14 6 477 2 443 2.86e-58 201
MS.gene86118.t1 AT2G30140 29.569 487 288 16 7 481 9 452 7.67e-56 194
MS.gene86118.t1 AT2G30140 29.363 487 288 16 7 481 9 451 1.27e-55 194
MS.gene86118.t1 AT2G36790 31.089 505 286 16 4 473 3 480 3.70e-54 191
MS.gene86118.t1 AT2G30150 28.216 482 294 13 11 481 13 453 9.47e-54 189
MS.gene86118.t1 AT4G01070 31.936 501 270 16 6 473 3 465 1.09e-53 189
MS.gene86118.t1 AT2G43840 27.292 480 301 13 9 479 5 445 2.11e-53 188
MS.gene86118.t1 AT2G23250 29.140 477 284 16 14 479 1 434 3.44e-53 187
MS.gene86118.t1 AT2G36770 29.191 507 288 16 11 479 14 487 6.64e-53 187
MS.gene86118.t1 AT2G43840 27.083 480 302 13 9 479 5 445 2.30e-52 185
MS.gene86118.t1 AT2G30150 28.151 476 290 13 17 481 3 437 2.81e-52 184
MS.gene86118.t1 AT3G53160 29.563 504 290 18 11 479 8 481 4.69e-52 185
MS.gene86118.t1 AT2G23260 27.515 487 307 14 5 481 4 454 6.79e-52 184
MS.gene86118.t1 AT1G30530 27.426 474 302 11 12 478 14 452 1.27e-51 183
MS.gene86118.t1 AT5G26310 29.134 508 277 18 9 479 5 466 2.39e-51 183
MS.gene86118.t1 AT5G17050 28.092 477 308 11 8 477 9 457 2.92e-51 182
MS.gene86118.t1 AT5G66690 28.032 503 289 16 9 479 5 466 5.98e-51 182
MS.gene86118.t1 AT2G36800 29.249 506 290 17 11 479 12 486 8.12e-51 182
MS.gene86118.t1 AT2G36780 29.412 493 305 15 11 479 14 487 1.54e-50 181
MS.gene86118.t1 AT2G36760 29.243 489 299 15 11 473 14 481 3.08e-50 181
MS.gene86118.t1 AT1G01420 31.299 508 274 21 1 476 1 465 6.54e-50 179
MS.gene86118.t1 AT1G05560 26.653 499 285 18 10 479 4 450 1.36e-49 178
MS.gene86118.t1 AT1G05560 26.653 499 285 18 10 479 54 500 1.78e-49 179
MS.gene86118.t1 AT1G01420 31.287 505 272 21 4 476 1 462 3.04e-49 177
MS.gene86118.t1 AT4G34131 27.843 510 300 15 7 482 6 481 8.23e-49 176
MS.gene86118.t1 AT4G15550 26.775 493 306 15 10 479 12 472 1.09e-48 176
MS.gene86118.t1 AT3G53150 27.853 517 301 18 8 479 19 508 2.94e-48 176
MS.gene86118.t1 AT2G36750 28.980 490 298 17 11 473 10 476 3.07e-48 175
MS.gene86118.t1 AT1G10400 28.974 497 289 20 8 479 4 461 4.87e-48 174
MS.gene86118.t1 AT5G14860 30.572 507 274 21 11 479 8 474 1.56e-47 173
MS.gene86118.t1 AT2G15480 27.309 498 313 16 7 479 6 479 1.65e-47 173
MS.gene86118.t1 AT5G17040 25.673 483 298 10 11 478 5 441 1.95e-47 171
MS.gene86118.t1 AT5G17040 29.245 318 193 5 174 478 41 339 7.29e-47 167
MS.gene86118.t1 AT2G15480 26.931 505 316 16 7 479 6 489 4.84e-46 169
MS.gene86118.t1 AT3G50740 28.210 514 280 19 9 479 5 472 7.65e-46 168
MS.gene86118.t1 AT2G15490 27.621 496 316 16 6 479 2 476 1.68e-45 167
MS.gene86118.t1 AT5G17030 25.523 478 320 10 7 479 8 454 1.92e-45 166
MS.gene86118.t1 AT5G37950 30.952 378 221 11 26 398 1 343 1.94e-45 164
MS.gene86118.t1 AT4G14090 28.261 506 280 21 2 479 4 454 2.89e-45 166
MS.gene86118.t1 AT1G24100 28.831 496 279 18 9 478 9 456 6.26e-45 165
MS.gene86118.t1 AT2G15490 27.455 499 316 16 6 479 2 479 6.76e-45 166
MS.gene86118.t1 AT2G29710 27.800 500 293 20 8 479 2 461 7.50e-45 165
MS.gene86118.t1 AT1G05530 25.767 489 305 14 9 478 3 452 7.55e-45 165
MS.gene86118.t1 AT2G16890 28.968 504 277 21 11 479 9 466 2.74e-44 164
MS.gene86118.t1 AT3G22250 26.866 469 293 12 8 459 5 440 9.35e-44 162
MS.gene86118.t1 AT5G37950 30.239 377 219 10 26 398 1 337 2.27e-43 158
MS.gene86118.t1 AT4G34138 26.706 513 294 17 9 481 9 479 3.60e-43 161
MS.gene86118.t1 AT5G03490 29.209 493 285 22 6 479 14 461 7.93e-43 159
MS.gene86118.t1 AT1G01390 29.032 496 298 17 4 477 1 464 1.55e-41 156
MS.gene86118.t1 AT1G01390 29.032 496 298 17 4 477 18 481 2.12e-41 156
MS.gene86118.t1 AT3G16520 28.184 369 228 12 123 478 113 457 2.69e-41 155
MS.gene86118.t1 AT4G34135 26.693 502 311 14 7 479 7 480 5.30e-41 155
MS.gene86118.t1 AT3G16520 28.333 360 221 12 123 469 113 448 5.60e-41 154
MS.gene86118.t1 AT3G16520 28.775 351 213 12 123 460 113 439 9.70e-41 153
MS.gene86118.t1 AT2G29730 27.010 485 302 18 13 477 7 459 3.67e-39 149
MS.gene86118.t1 AT2G29740 27.655 499 308 16 4 477 1 471 4.23e-39 149
MS.gene86118.t1 AT1G51210 29.167 456 264 21 9 450 18 428 6.84e-39 148
MS.gene86118.t1 AT4G36770 27.812 489 269 18 11 462 4 445 2.32e-38 147
MS.gene86118.t1 AT1G07260 29.333 375 223 11 123 479 120 470 7.00e-38 146
MS.gene86118.t1 AT2G18560 30.149 335 177 13 172 473 59 369 1.40e-36 140
MS.gene86118.t1 AT2G18570 25.344 509 309 18 9 488 3 469 2.11e-36 142
MS.gene86118.t1 AT1G73880 27.419 496 312 16 1 479 1 465 2.58e-36 141
MS.gene86118.t1 AT1G07250 32.384 281 165 7 213 479 202 471 1.05e-35 140
MS.gene86118.t1 AT3G21790 28.608 395 237 11 111 479 102 477 1.64e-35 139
MS.gene86118.t1 AT3G21800 26.984 504 299 16 13 481 7 476 1.78e-35 139
MS.gene86118.t1 AT2G16890 27.974 454 263 20 11 438 9 424 1.94e-34 135
MS.gene86118.t1 AT1G07240 31.408 277 163 7 220 479 208 474 2.27e-34 136
MS.gene86118.t1 AT3G21780 28.235 425 257 13 83 481 67 469 8.35e-34 134
MS.gene86118.t1 AT4G15280 27.000 400 239 11 110 479 96 472 8.22e-33 131
MS.gene86118.t1 AT4G15280 27.000 400 239 11 110 479 128 504 8.88e-33 132
MS.gene86118.t1 AT2G29750 26.923 390 244 12 106 479 108 472 1.70e-32 130
MS.gene86118.t1 AT3G21750 26.698 427 254 12 84 479 69 467 4.73e-32 129
MS.gene86118.t1 AT4G15260 27.926 376 220 12 131 479 2 353 4.87e-32 127
MS.gene86118.t1 AT5G12890 26.139 505 319 21 4 479 1 480 9.47e-32 129
MS.gene86118.t1 AT3G21760 26.587 504 307 16 13 481 6 481 2.35e-31 127
MS.gene86118.t1 AT5G49690 24.190 463 293 14 11 456 10 431 1.38e-30 125
MS.gene86118.t1 AT2G22590 27.178 482 289 20 1 456 1 446 3.05e-27 115
MS.gene86118.t1 AT5G65550 24.411 467 303 15 9 458 7 440 3.67e-27 115
MS.gene86118.t1 AT1G06000 25.051 495 281 17 7 479 6 432 1.11e-24 107
MS.gene86118.t1 AT4G01070 29.619 341 191 11 6 335 3 305 1.03e-21 97.1
MS.gene86118.t1 AT4G27570 23.629 474 298 16 9 466 5 430 2.27e-19 91.3
MS.gene86118.t1 AT4G09500 24.846 487 271 20 9 466 4 424 1.27e-18 89.0
MS.gene86118.t1 AT5G53990 25.212 472 284 22 11 466 6 424 1.50e-18 89.0
MS.gene86118.t1 AT2G22930 24.435 487 294 18 11 479 6 436 1.85e-18 88.6
MS.gene86118.t1 AT4G27560 24.790 476 290 19 9 466 5 430 1.93e-18 88.6
MS.gene86118.t1 AT1G64910 25.386 453 250 19 11 441 6 392 1.43e-17 85.9
MS.gene86118.t1 AT4G34135 25.648 347 213 11 7 335 7 326 1.75e-17 84.3
MS.gene86118.t1 AT4G09500 30.645 186 114 6 291 466 219 399 6.79e-17 83.6
MS.gene86118.t1 AT5G54010 29.778 225 133 9 232 450 202 407 7.51e-17 83.6
MS.gene86118.t1 AT3G29630 31.915 188 110 5 291 466 220 401 1.72e-15 79.3
MS.gene86118.t1 AT3G29630 31.915 188 110 5 291 466 246 427 1.98e-15 79.3
MS.gene86118.t1 AT5G54060 25.100 498 309 22 1 475 1 457 1.24e-14 77.0
MS.gene86118.t1 AT2G23210 24.834 302 183 12 6 300 5 269 2.13e-14 74.3
MS.gene86118.t1 AT1G50580 24.204 471 295 19 9 466 4 425 9.10e-14 73.9
MS.gene86118.t1 AT1G64920 27.652 264 148 12 227 466 184 428 6.32e-13 71.6

Find 127 sgRNAs with CRISPR-Local

Find 183 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGGCAGAACCAAAATAAT+TGG 0.133977 6.3:+9010761 None:intergenic
ATTGAAGAACTTTCGGTTAA+AGG 0.168555 6.3:-9012358 MS.gene86118:CDS
AATCTTTAGGTTCCAATCTA+TGG 0.207659 6.3:-9012116 MS.gene86118:CDS
GAATTGATACCCAATTATTT+TGG 0.223902 6.3:-9010771 MS.gene86118:CDS
AGGATTTGCCCGACTTTATA+AGG 0.257784 6.3:-9012338 MS.gene86118:CDS
GCAAAGATTCTTTACCTTAG+AGG 0.267252 6.3:-9013201 MS.gene86118:CDS
GAACTTGGACAAAGTTATTA+AGG 0.272309 6.3:-9011527 MS.gene86118:CDS
GTGAAACCGTCAAAGGCTTT+TGG 0.274101 6.3:+9013117 None:intergenic
CAATGCTAGTGTTGACAATT+TGG 0.280357 6.3:+9010743 None:intergenic
CATAATCACTTGGAATCTTT+AGG 0.289070 6.3:-9012129 MS.gene86118:CDS
AATTCTACCATGACATCATT+TGG 0.292770 6.3:+9012306 None:intergenic
AGGCCTAATGATCCACAAAA+AGG 0.323496 6.3:+9011954 None:intergenic
GATATCTTCTTTCCATAGAT+TGG 0.330335 6.3:+9012104 None:intergenic
CAGATATATCTACAGTTTGT+TGG 0.330625 6.3:+9011721 None:intergenic
AGTGAGGATTGTTGTATTGC+AGG 0.334356 6.3:+9010712 None:intergenic
TCTCTCTTACTGATTCAATA+AGG 0.349397 6.3:-9013020 MS.gene86118:CDS
AAAGATTGTTGGAATGTTGC+AGG 0.351566 6.3:+9010617 None:intergenic
CTATCTGACAAATGGATATC+TGG 0.351925 6.3:-9012406 MS.gene86118:CDS
TCTGTTGTTTATGTGAATTT+TGG 0.371111 6.3:-9012045 MS.gene86118:CDS
TTCCTGGATTGAAGAACTTT+CGG 0.371438 6.3:-9012365 MS.gene86118:CDS
TTCACTAAATCAAAGATTGT+TGG 0.377024 6.3:+9010606 None:intergenic
ATGTTATGTGAAAGCCTCTA+AGG 0.378455 6.3:+9013187 None:intergenic
ACCAAAGTAGACTGTATTCC+TGG 0.382799 6.3:-9012381 MS.gene86118:CDS
TCCGTTGGTGTTAAACCATC+TGG 0.387618 6.3:+9013072 None:intergenic
TTCCCATCTTTGTATACTGT+TGG 0.396610 6.3:-9012183 MS.gene86118:CDS
GCTGGAGAGAAGAAAACAAT+TGG 0.398571 6.3:+9012856 None:intergenic
ATCAACTGTTAGAGTTTGCT+TGG 0.400460 6.3:-9011999 MS.gene86118:CDS
TCAGAAACTAAGCAAGTAAC+TGG 0.402772 6.3:+9012925 None:intergenic
GAATTGATGTCAGGAGATAA+TGG 0.409582 6.3:-9011628 MS.gene86118:CDS
CGCTTCAGCAGCGACTGAAT+TGG 0.410543 6.3:+9010651 None:intergenic
ATTAGGCCTGACCTTGTCAT+TGG 0.411083 6.3:-9011940 MS.gene86118:CDS
ATCTGCAAAACATGGGAGAT+TGG 0.415331 6.3:-9011703 MS.gene86118:CDS
TTGTTGGAATGTTGCAGGTC+TGG 0.422799 6.3:+9010622 None:intergenic
AGTGGCAGAGTCATGAAGTT+TGG 0.428176 6.3:+9012963 None:intergenic
AACCGAAAGTTCTTCAATCC+AGG 0.430077 6.3:+9012363 None:intergenic
GTGCTGAACCACCGTTCAAT+TGG 0.430874 6.3:-9011835 MS.gene86118:CDS
TCAACTGTTAGAGTTTGCTT+GGG 0.433505 6.3:-9011998 MS.gene86118:CDS
ATTCTACCATGACATCATTT+GGG 0.435983 6.3:+9012307 None:intergenic
GGAGTTTGATTTAATAATGA+AGG 0.441850 6.3:+9012153 None:intergenic
GATAAGAGCTATCTGACAAA+TGG 0.449906 6.3:-9012414 MS.gene86118:CDS
AGGCCTGACCTTGTCATTGG+TGG 0.451102 6.3:-9011937 MS.gene86118:CDS
TTGATTGCATATCCAGTTCA+AGG 0.452811 6.3:-9013249 MS.gene86118:CDS
GGATTGATGTGGCCTTGAAC+TGG 0.452920 6.3:+9013237 None:intergenic
TTGGCAGAACCAAAATAATT+GGG 0.456159 6.3:+9010762 None:intergenic
GAGAATGAAATTTCAGATAG+AGG 0.463049 6.3:-9011889 MS.gene86118:CDS
GCAAACTCTAACAGTTGATC+TGG 0.464496 6.3:+9012003 None:intergenic
TTTGGCAAGAAGTTCACAAA+AGG 0.464502 6.3:+9012981 None:intergenic
GTTAGAGTTTGCTTGGGGAT+TGG 0.465233 6.3:-9011992 MS.gene86118:CDS
ATGTAGCAGGATGGAGTAGT+AGG 0.468708 6.3:+9010801 None:intergenic
TGGTTCAGCACTTGCTCTTG+TGG 0.471466 6.3:+9011847 None:intergenic
AACAACAGACTCAGGCTCCT+TGG 0.475296 6.3:+9012059 None:intergenic
GGTCCAACAGTATACAAAGA+TGG 0.475848 6.3:+9012180 None:intergenic
CTGATCAATGAATTGATGTC+AGG 0.476813 6.3:-9011637 MS.gene86118:CDS
TTTCGTACACTGTTTGAGAA+AGG 0.482216 6.3:-9012802 MS.gene86118:CDS
TGATTTAATAATGAAGGTAA+AGG 0.487971 6.3:+9012159 None:intergenic
AGGGGTCCAAAAGCCTTTGA+CGG 0.491144 6.3:-9013123 MS.gene86118:CDS
AAGAAGGTACTTGCACTAGC+TGG 0.498703 6.3:+9012838 None:intergenic
TGGAATGTTGCAGGTCTGGC+TGG 0.499812 6.3:+9010626 None:intergenic
CTGGAGTTCCAATGTTGTGT+TGG 0.500951 6.3:-9011762 MS.gene86118:CDS
ACAAACGATTGCTCAAATCA+AGG 0.501032 6.3:-9013143 MS.gene86118:CDS
AAGATATCAAGTGTCTTGAA+TGG 0.502401 6.3:-9012089 MS.gene86118:CDS
AAAGATTCCAAGTGATTATG+TGG 0.502899 6.3:+9012132 None:intergenic
GCAGAGGAGACGACCAGCCC+TGG 0.507827 6.3:-9011565 MS.gene86118:CDS
CTGAACCACCGTTCAATTGG+TGG 0.509044 6.3:-9011832 MS.gene86118:CDS
CAAACGATTGCTCAAATCAA+GGG 0.509246 6.3:-9013142 MS.gene86118:CDS
TCTTGAATGGCTTGAATCCA+AGG 0.512622 6.3:-9012076 MS.gene86118:CDS
GAGCCACCAATGACAAGGTC+AGG 0.514860 6.3:+9011934 None:intergenic
GATGATGAGTCGAAAGGTCA+TGG 0.516917 6.3:-9011602 MS.gene86118:CDS
CAATGAACAACCACCAGGGC+TGG 0.517015 6.3:+9011552 None:intergenic
TCCAGGAATACAGTCTACTT+TGG 0.519998 6.3:+9012380 None:intergenic
GTCTGTAATCCTTATAAAGT+CGG 0.521719 6.3:+9012329 None:intergenic
TCTACAGTTTGTTGGCTGAT+CGG 0.522577 6.3:+9011729 None:intergenic
CACAAATTGTTACCTTTGAG+TGG 0.524407 6.3:+9012772 None:intergenic
TCTGTAATCCTTATAAAGTC+GGG 0.538148 6.3:+9012330 None:intergenic
ACCACTGAAAGCGTATGTGC+TGG 0.538316 6.3:-9011781 MS.gene86118:CDS
TTTGATTTAGTGAAGTCTGA+AGG 0.543679 6.3:-9010597 MS.gene86118:CDS
CTGGAGAGAAGAAAACAATT+GGG 0.544893 6.3:+9012857 None:intergenic
TTCATCAATGAACAACCACC+AGG 0.549195 6.3:+9011547 None:intergenic
TTGGCAAGAAGTTCACAAAA+GGG 0.550200 6.3:+9012982 None:intergenic
TAATGTGAAAAGAGAGGAGG+TGG 0.557386 6.3:-9011665 MS.gene86118:CDS
GTCCAACAGTATACAAAGAT+GGG 0.563463 6.3:+9012181 None:intergenic
TGGTTGTTCATTGATGAACT+TGG 0.566518 6.3:-9011542 MS.gene86118:CDS
CAATTCGTACAATATGTAGC+AGG 0.567374 6.3:+9010788 None:intergenic
CTTCATGACTCTGCCACTGA+TGG 0.567404 6.3:-9012958 MS.gene86118:CDS
ATCTTTGCTAGTTTGAACAA+AGG 0.573075 6.3:+9013216 None:intergenic
GATTCTTGACTCATTGTGGA+TGG 0.573721 6.3:-9011810 MS.gene86118:CDS
TTCACATAAACAACAGACTC+AGG 0.574140 6.3:+9012051 None:intergenic
GGTCATGGAGTTGAAGAAGA+AGG 0.576013 6.3:-9011587 MS.gene86118:CDS
ATAGAGGACTAATCGCGAGC+TGG 0.576303 6.3:-9011873 MS.gene86118:CDS
TCAAACTCCACATAATCACT+TGG 0.577646 6.3:-9012139 MS.gene86118:CDS
GGAGTTGAAGAAGAAGGCAG+AGG 0.577969 6.3:-9011581 MS.gene86118:CDS
TACAGACCCAAATGATGTCA+TGG 0.579132 6.3:-9012313 MS.gene86118:CDS
TCCAGATGGTTTAACACCAA+CGG 0.581025 6.3:-9013073 MS.gene86118:CDS
AAAGTGTAAAACAGACAAGA+AGG 0.584499 6.3:+9012822 None:intergenic
TGGTGTTAAACCATCTGGAA+TGG 0.584503 6.3:+9013077 None:intergenic
GTTATGCAAAGGACATCTGA+TGG 0.584629 6.3:+9010678 None:intergenic
AACTTTGAGACCATTCCAGA+TGG 0.585105 6.3:-9013087 MS.gene86118:CDS
GTAGATATATCTGCAAAACA+TGG 0.591119 6.3:-9011711 MS.gene86118:CDS
GGTGGATTCTTGACTCATTG+TGG 0.591311 6.3:-9011814 MS.gene86118:CDS
TCCAGCACATACGCTTTCAG+TGG 0.607272 6.3:+9011780 None:intergenic
CAACTGTTAGAGTTTGCTTG+GGG 0.607797 6.3:-9011997 MS.gene86118:CDS
TATGCAATCAACACAGCATG+TGG 0.614685 6.3:+9013261 None:intergenic
GGTAGAATTTCTCATTGAAG+CGG 0.615761 6.3:-9012292 MS.gene86118:CDS
TCAAGAATCCACCAATTGAA+CGG 0.615833 6.3:+9011824 None:intergenic
TGGTGGAACAAGACCATCAG+TGG 0.618174 6.3:+9012945 None:intergenic
AAAGTCGGTGAAACCGTCAA+AGG 0.623735 6.3:+9013110 None:intergenic
TCGTACAATATGTAGCAGGA+TGG 0.625891 6.3:+9010792 None:intergenic
GAAACTAAGCAAGTAACTGG+TGG 0.626441 6.3:+9012928 None:intergenic
CGATACTAATGTGAAAAGAG+AGG 0.628804 6.3:-9011671 MS.gene86118:CDS
AAAGGTCTAATACCACTCAA+AGG 0.631851 6.3:-9012784 MS.gene86118:intron
TAGATATATCTGCAAAACAT+GGG 0.633266 6.3:-9011710 MS.gene86118:CDS
GTTTGAACAAAGGATTGATG+TGG 0.634394 6.3:+9013226 None:intergenic
TTAACACCAACGGAAGGTGA+TGG 0.637881 6.3:-9013063 MS.gene86118:CDS
CTTGGACAAAGTTATTAAGG+AGG 0.639122 6.3:-9011524 MS.gene86118:intron
GAGGAGACGACCAGCCCTGG+TGG 0.643384 6.3:-9011562 MS.gene86118:CDS
TACTAATGTGAAAAGAGAGG+AGG 0.643768 6.3:-9011668 MS.gene86118:CDS
ACATCACCATCACCTTCCGT+TGG 0.644729 6.3:+9013057 None:intergenic
GAATTGGTGCAGTTATGCAA+AGG 0.644785 6.3:+9010667 None:intergenic
TGGAAAGATGATGAGTCGAA+AGG 0.646383 6.3:-9011608 MS.gene86118:CDS
AATGGTCTCAAAGTTAAAGT+CGG 0.651460 6.3:+9013095 None:intergenic
TAAACGAGCCACCAATGACA+AGG 0.656632 6.3:+9011929 None:intergenic
GATGGATATTGCAAGAAGTG+AGG 0.657543 6.3:+9010696 None:intergenic
AAACGATTGCTCAAATCAAG+GGG 0.658120 6.3:-9013141 MS.gene86118:CDS
TCAACACTAGCATTGCTACA+CGG 0.663345 6.3:-9010735 MS.gene86118:CDS
GATGGTTTAACACCAACGGA+AGG 0.695710 6.3:-9013069 MS.gene86118:CDS
TCATCAATGAACAACCACCA+GGG 0.720611 6.3:+9011548 None:intergenic
AGAATCCACCAATTGAACGG+TGG 0.736713 6.3:+9011827 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATAAGAAATTTTGATTTGA+CGG - chr6.3:9011335-9011354 MS.gene86118:intron 15.0%
!! TGATTTAATAATGAAGGTAA+AGG + chr6.3:9011722-9011741 None:intergenic 20.0%
! AACATACACATTATTTACCA+TGG - chr6.3:9012821-9012840 MS.gene86118:CDS 25.0%
! AGTGTTAAAAATAATAGCAG+AGG + chr6.3:9011630-9011649 None:intergenic 25.0%
! CATAATAAGTTCCACTTATA+TGG + chr6.3:9012516-9012535 None:intergenic 25.0%
! GGTAAATAATGTGTATGTTT+CGG + chr6.3:9012820-9012839 None:intergenic 25.0%
! TAAAATGTAAGCCATATAAG+TGG - chr6.3:9012502-9012521 MS.gene86118:intron 25.0%
! TAATAGTTATGATCTACACA+TGG - chr6.3:9012601-9012620 MS.gene86118:intron 25.0%
! TAGATATATCTGCAAAACAT+GGG - chr6.3:9012168-9012187 MS.gene86118:CDS 25.0%
! TTCACTAAATCAAAGATTGT+TGG + chr6.3:9013275-9013294 None:intergenic 25.0%
!! GAATTGATACCCAATTATTT+TGG - chr6.3:9013107-9013126 MS.gene86118:CDS 25.0%
!! GGAGTTTGATTTAATAATGA+AGG + chr6.3:9011728-9011747 None:intergenic 25.0%
!!! AATTTGTGATCATTTTTACG+AGG - chr6.3:9011121-9011140 MS.gene86118:intron 25.0%
!!! GTCTCATATATTTTGAATGT+AGG - chr6.3:9012671-9012690 MS.gene86118:intron 25.0%
!!! TCTGTTGTTTATGTGAATTT+TGG - chr6.3:9011833-9011852 MS.gene86118:CDS 25.0%
AAAGATTCCAAGTGATTATG+TGG + chr6.3:9011749-9011768 None:intergenic 30.0%
AAAGTGTAAAACAGACAAGA+AGG + chr6.3:9011059-9011078 None:intergenic 30.0%
AAGATATACAGCAAAACAGA+TGG + chr6.3:9012645-9012664 None:intergenic 30.0%
AAGATATCAAGTGTCTTGAA+TGG - chr6.3:9011789-9011808 MS.gene86118:CDS 30.0%
AATGGTCTCAAAGTTAAAGT+CGG + chr6.3:9010786-9010805 None:intergenic 30.0%
AATTCTACCATGACATCATT+TGG + chr6.3:9011575-9011594 None:intergenic 30.0%
AGATTAAAGTGATTTATCCC+AGG - chr6.3:9012395-9012414 MS.gene86118:CDS 30.0%
ATAATGATGCATATAGTGTG+AGG - chr6.3:9012466-9012485 MS.gene86118:intron 30.0%
ATTCTACCATGACATCATTT+GGG + chr6.3:9011574-9011593 None:intergenic 30.0%
ATTGAAGAACTTTCGGTTAA+AGG - chr6.3:9011520-9011539 MS.gene86118:intron 30.0%
CAGATATATCTACAGTTTGT+TGG + chr6.3:9012160-9012179 None:intergenic 30.0%
CATAATCACTTGGAATCTTT+AGG - chr6.3:9011749-9011768 MS.gene86118:CDS 30.0%
CATTACATTTAAGTCAACCA+TGG - chr6.3:9012981-9013000 MS.gene86118:CDS 30.0%
CTAAAACTACCAAAACCTTT+AGG + chr6.3:9012770-9012789 None:intergenic 30.0%
GAACTTGGACAAAGTTATTA+AGG - chr6.3:9012351-9012370 MS.gene86118:CDS 30.0%
GAGAATGAAATTTCAGATAG+AGG - chr6.3:9011989-9012008 MS.gene86118:CDS 30.0%
GATATCTTCTTTCCATAGAT+TGG + chr6.3:9011777-9011796 None:intergenic 30.0%
GTAGATATATCTGCAAAACA+TGG - chr6.3:9012167-9012186 MS.gene86118:CDS 30.0%
GTCTGTAATCCTTATAAAGT+CGG + chr6.3:9011552-9011571 None:intergenic 30.0%
GTTTACAATGAGTTACTAAG+CGG - chr6.3:9011378-9011397 MS.gene86118:intron 30.0%
TCTGTAATCCTTATAAAGTC+GGG + chr6.3:9011551-9011570 None:intergenic 30.0%
TTGGCAGAACCAAAATAATT+GGG + chr6.3:9013119-9013138 None:intergenic 30.0%
TTTGGCAGAACCAAAATAAT+TGG + chr6.3:9013120-9013139 None:intergenic 30.0%
! AATCTTTAGGTTCCAATCTA+TGG - chr6.3:9011762-9011781 MS.gene86118:CDS 30.0%
! ACTCTTTTCAGAATTACTTC+CGG + chr6.3:9011162-9011181 None:intergenic 30.0%
! ATCTTTGCTAGTTTGAACAA+AGG + chr6.3:9010665-9010684 None:intergenic 30.0%
! TGGTTGACTTAAATGTAATG+TGG + chr6.3:9012981-9013000 None:intergenic 30.0%
! TTTGATTTAGTGAAGTCTGA+AGG - chr6.3:9013281-9013300 MS.gene86118:CDS 30.0%
!! CATACTGATTCTTGATTTGT+TGG - chr6.3:9012711-9012730 MS.gene86118:intron 30.0%
!! TCTCTCTTACTGATTCAATA+AGG - chr6.3:9010858-9010877 MS.gene86118:intron 30.0%
!!! AACTGGTCATATTTTGAGAT+GGG + chr6.3:9013017-9013036 None:intergenic 30.0%
!!! AGAAATTTTGATTTGACGGT+TGG - chr6.3:9011339-9011358 MS.gene86118:intron 30.0%
!!! GTAGTTTTAGAATCTGCATT+GGG - chr6.3:9012780-9012799 MS.gene86118:intron 30.0%
!!! TAGTTTTAGAATCTGCATTG+GGG - chr6.3:9012781-9012800 MS.gene86118:intron 30.0%
AAAAAAGGCCAACACAACAT+TGG + chr6.3:9012127-9012146 None:intergenic 35.0%
AAACGATTGCTCAAATCAAG+GGG - chr6.3:9010737-9010756 MS.gene86118:CDS 35.0%
AAAGATTGTTGGAATGTTGC+AGG + chr6.3:9013264-9013283 None:intergenic 35.0%
AAAGGTCTAATACCACTCAA+AGG - chr6.3:9011094-9011113 MS.gene86118:intron 35.0%
ACAAACGATTGCTCAAATCA+AGG - chr6.3:9010735-9010754 MS.gene86118:CDS 35.0%
ATAACACAACCACATTTCCT+GGG + chr6.3:9012415-9012434 None:intergenic 35.0%
ATGTTATGTGAAAGCCTCTA+AGG + chr6.3:9010694-9010713 None:intergenic 35.0%
CAAACGATTGCTCAAATCAA+GGG - chr6.3:9010736-9010755 MS.gene86118:CDS 35.0%
CAATTCGTACAATATGTAGC+AGG + chr6.3:9013093-9013112 None:intergenic 35.0%
CACAAATTGTTACCTTTGAG+TGG + chr6.3:9011109-9011128 None:intergenic 35.0%
CGATACTAATGTGAAAAGAG+AGG - chr6.3:9012207-9012226 MS.gene86118:CDS 35.0%
CTATCTGACAAATGGATATC+TGG - chr6.3:9011472-9011491 MS.gene86118:intron 35.0%
CTGATCAATGAATTGATGTC+AGG - chr6.3:9012241-9012260 MS.gene86118:CDS 35.0%
CTGGAGAGAAGAAAACAATT+GGG + chr6.3:9011024-9011043 None:intergenic 35.0%
CTTAAATGTAATGTGGATGC+CGG + chr6.3:9012974-9012993 None:intergenic 35.0%
CTTGGACAAAGTTATTAAGG+AGG - chr6.3:9012354-9012373 MS.gene86118:CDS 35.0%
GAATTGATGTCAGGAGATAA+TGG - chr6.3:9012250-9012269 MS.gene86118:CDS 35.0%
GATAAGAGCTATCTGACAAA+TGG - chr6.3:9011464-9011483 MS.gene86118:intron 35.0%
GCAAAGATTCTTTACCTTAG+AGG - chr6.3:9010677-9010696 MS.gene86118:CDS 35.0%
GGTAGAATTTCTCATTGAAG+CGG - chr6.3:9011586-9011605 MS.gene86118:CDS 35.0%
GTAAGGATGACAAATGAAGA+GGG + chr6.3:9012870-9012889 None:intergenic 35.0%
GTCCAACAGTATACAAAGAT+GGG + chr6.3:9011700-9011719 None:intergenic 35.0%
GTTTGAACAAAGGATTGATG+TGG + chr6.3:9010655-9010674 None:intergenic 35.0%
TACTAATGTGAAAAGAGAGG+AGG - chr6.3:9012210-9012229 MS.gene86118:CDS 35.0%
TATACAGCAAAACAGATGGA+TGG + chr6.3:9012641-9012660 None:intergenic 35.0%
TCAAACTCCACATAATCACT+TGG - chr6.3:9011739-9011758 MS.gene86118:CDS 35.0%
TCAAGAATCCACCAATTGAA+CGG + chr6.3:9012057-9012076 None:intergenic 35.0%
TCAGAAACTAAGCAAGTAAC+TGG + chr6.3:9010956-9010975 None:intergenic 35.0%
TCTCAAAATATGACCAGTTC+TGG - chr6.3:9013018-9013037 MS.gene86118:CDS 35.0%
TGGTTGTTCATTGATGAACT+TGG - chr6.3:9012336-9012355 MS.gene86118:CDS 35.0%
TTCACATAAACAACAGACTC+AGG + chr6.3:9011830-9011849 None:intergenic 35.0%
TTCCCATCTTTGTATACTGT+TGG - chr6.3:9011695-9011714 MS.gene86118:CDS 35.0%
TTCCTGGATTGAAGAACTTT+CGG - chr6.3:9011513-9011532 MS.gene86118:intron 35.0%
TTGATTGCATATCCAGTTCA+AGG - chr6.3:9010629-9010648 MS.gene86118:CDS 35.0%
TTGGCAAGAAGTTCACAAAA+GGG + chr6.3:9010899-9010918 None:intergenic 35.0%
TTTCGTACACTGTTTGAGAA+AGG - chr6.3:9011076-9011095 MS.gene86118:intron 35.0%
TTTGGCAAGAAGTTCACAAA+AGG + chr6.3:9010900-9010919 None:intergenic 35.0%
! AACCCTTTTTGTGGATCATT+AGG - chr6.3:9011921-9011940 MS.gene86118:CDS 35.0%
! ATAGCAAGAAACCCTTTTTG+TGG - chr6.3:9011912-9011931 MS.gene86118:CDS 35.0%
! ATCAACTGTTAGAGTTTGCT+TGG - chr6.3:9011879-9011898 MS.gene86118:CDS 35.0%
! TCAACTGTTAGAGTTTGCTT+GGG - chr6.3:9011880-9011899 MS.gene86118:CDS 35.0%
!! CAATGCTAGTGTTGACAATT+TGG + chr6.3:9013138-9013157 None:intergenic 35.0%
!! GAACTGGTCATATTTTGAGA+TGG + chr6.3:9013018-9013037 None:intergenic 35.0%
!!! GGTAGTTTTAGAATCTGCAT+TGG - chr6.3:9012779-9012798 MS.gene86118:intron 35.0%
AACCGAAAGTTCTTCAATCC+AGG + chr6.3:9011518-9011537 None:intergenic 40.0%
ACCAAAGTAGACTGTATTCC+TGG - chr6.3:9011497-9011516 MS.gene86118:intron 40.0%
AGGATTTGCCCGACTTTATA+AGG - chr6.3:9011540-9011559 MS.gene86118:CDS 40.0%
AGGCCTAATGATCCACAAAA+AGG + chr6.3:9011927-9011946 None:intergenic 40.0%
AGTGAGGATTGTTGTATTGC+AGG + chr6.3:9013169-9013188 None:intergenic 40.0%
ATCTGCAAAACATGGGAGAT+TGG - chr6.3:9012175-9012194 MS.gene86118:CDS 40.0%
CATTTAAGTCAACCATGGCT+AGG - chr6.3:9012986-9013005 MS.gene86118:CDS 40.0%
CGTAAGGATGACAAATGAAG+AGG + chr6.3:9012871-9012890 None:intergenic 40.0%
GAAACTAAGCAAGTAACTGG+TGG + chr6.3:9010953-9010972 None:intergenic 40.0%
GAATTGGTGCAGTTATGCAA+AGG + chr6.3:9013214-9013233 None:intergenic 40.0%
GAGGAGACAAAAAGTTACTC+CGG - chr6.3:9011140-9011159 MS.gene86118:intron 40.0%
GAGTATGAGCTTCTGTGTAA+TGG + chr6.3:9012927-9012946 None:intergenic 40.0%
GATAACACAACCACATTTCC+TGG + chr6.3:9012416-9012435 None:intergenic 40.0%
GATGGATATTGCAAGAAGTG+AGG + chr6.3:9013185-9013204 None:intergenic 40.0%
GATTCTTGACTCATTGTGGA+TGG - chr6.3:9012068-9012087 MS.gene86118:CDS 40.0%
GCAAACTCTAACAGTTGATC+TGG + chr6.3:9011878-9011897 None:intergenic 40.0%
GCTGGAGAGAAGAAAACAAT+TGG + chr6.3:9011025-9011044 None:intergenic 40.0%
GGCCTAATGATCCACAAAAA+GGG + chr6.3:9011926-9011945 None:intergenic 40.0%
GGTCCAACAGTATACAAAGA+TGG + chr6.3:9011701-9011720 None:intergenic 40.0%
GTGATTTATCCCAGGAAATG+TGG - chr6.3:9012403-9012422 MS.gene86118:CDS 40.0%
GTTATGCAAAGGACATCTGA+TGG + chr6.3:9013203-9013222 None:intergenic 40.0%
TAATGTGAAAAGAGAGGAGG+TGG - chr6.3:9012213-9012232 MS.gene86118:CDS 40.0%
TACAGACCCAAATGATGTCA+TGG - chr6.3:9011565-9011584 MS.gene86118:CDS 40.0%
TAGTAGCCAGCATATCCTAA+AGG - chr6.3:9012752-9012771 MS.gene86118:intron 40.0%
TATGCAATCAACACAGCATG+TGG + chr6.3:9010620-9010639 None:intergenic 40.0%
TCAACACTAGCATTGCTACA+CGG - chr6.3:9013143-9013162 MS.gene86118:CDS 40.0%
TCATCAATGAACAACCACCA+GGG + chr6.3:9012333-9012352 None:intergenic 40.0%
TCATGCTTTCTCAAGCAAGT+TGG + chr6.3:9012899-9012918 None:intergenic 40.0%
TCCAGATGGTTTAACACCAA+CGG - chr6.3:9010805-9010824 MS.gene86118:intron 40.0%
TCCAGGAATACAGTCTACTT+TGG + chr6.3:9011501-9011520 None:intergenic 40.0%
TCGTACAATATGTAGCAGGA+TGG + chr6.3:9013089-9013108 None:intergenic 40.0%
TCTTGAATGGCTTGAATCCA+AGG - chr6.3:9011802-9011821 MS.gene86118:CDS 40.0%
TGGAAAGATGATGAGTCGAA+AGG - chr6.3:9012270-9012289 MS.gene86118:CDS 40.0%
TTCATCAATGAACAACCACC+AGG + chr6.3:9012334-9012353 None:intergenic 40.0%
! CAACTGTTAGAGTTTGCTTG+GGG - chr6.3:9011881-9011900 MS.gene86118:CDS 40.0%
! CCAGCATATCCTAAAGGTTT+TGG - chr6.3:9012758-9012777 MS.gene86118:intron 40.0%
! TATGACCAGTTCTGGTAATG+TGG - chr6.3:9013026-9013045 MS.gene86118:CDS 40.0%
! TGGTGTTAAACCATCTGGAA+TGG + chr6.3:9010804-9010823 None:intergenic 40.0%
!! AACTTTGAGACCATTCCAGA+TGG - chr6.3:9010791-9010810 MS.gene86118:CDS 40.0%
!! CCAAAACCTTTAGGATATGC+TGG + chr6.3:9012761-9012780 None:intergenic 40.0%
!! TCTACAGTTTGTTGGCTGAT+CGG + chr6.3:9012152-9012171 None:intergenic 40.0%
AAAGTCGGTGAAACCGTCAA+AGG + chr6.3:9010771-9010790 None:intergenic 45.0%
AGAATCCACCAATTGAACGG+TGG + chr6.3:9012054-9012073 None:intergenic 45.0%
AGTGGCAGAGTCATGAAGTT+TGG + chr6.3:9010918-9010937 None:intergenic 45.0%
ATGTAGCAGGATGGAGTAGT+AGG + chr6.3:9013080-9013099 None:intergenic 45.0%
ATTAGGCCTGACCTTGTCAT+TGG - chr6.3:9011938-9011957 MS.gene86118:CDS 45.0%
CTGGAGTTCCAATGTTGTGT+TGG - chr6.3:9012116-9012135 MS.gene86118:CDS 45.0%
GATGACAAATGAAGAGGGAG+AGG + chr6.3:9012865-9012884 None:intergenic 45.0%
GATGATGAGTCGAAAGGTCA+TGG - chr6.3:9012276-9012295 MS.gene86118:CDS 45.0%
GATGGTTTAACACCAACGGA+AGG - chr6.3:9010809-9010828 MS.gene86118:intron 45.0%
GGTCATGGAGTTGAAGAAGA+AGG - chr6.3:9012291-9012310 MS.gene86118:CDS 45.0%
GTTGGCTGATCGGCAAAAAA+AGG + chr6.3:9012142-9012161 None:intergenic 45.0%
TAAACGAGCCACCAATGACA+AGG + chr6.3:9011952-9011971 None:intergenic 45.0%
TGCATTGGGGTACAGAATAG+TGG - chr6.3:9012794-9012813 MS.gene86118:CDS 45.0%
TTAACACCAACGGAAGGTGA+TGG - chr6.3:9010815-9010834 MS.gene86118:intron 45.0%
TTGTTGGAATGTTGCAGGTC+TGG + chr6.3:9013259-9013278 None:intergenic 45.0%
! GGTGGATTCTTGACTCATTG+TGG - chr6.3:9012064-9012083 MS.gene86118:CDS 45.0%
! GTGAAACCGTCAAAGGCTTT+TGG + chr6.3:9010764-9010783 None:intergenic 45.0%
! GTTAGAGTTTGCTTGGGGAT+TGG - chr6.3:9011886-9011905 MS.gene86118:CDS 45.0%
!! AAGAAGGTACTTGCACTAGC+TGG + chr6.3:9011043-9011062 None:intergenic 45.0%
!! TCCGTTGGTGTTAAACCATC+TGG + chr6.3:9010809-9010828 None:intergenic 45.0%
AACAACAGACTCAGGCTCCT+TGG + chr6.3:9011822-9011841 None:intergenic 50.0%
ACATCACCATCACCTTCCGT+TGG + chr6.3:9010824-9010843 None:intergenic 50.0%
AGCAGCCACATTACCAGAAC+TGG + chr6.3:9013034-9013053 None:intergenic 50.0%
AGGGGTCCAAAAGCCTTTGA+CGG - chr6.3:9010755-9010774 MS.gene86118:CDS 50.0%
ATAGAGGACTAATCGCGAGC+TGG - chr6.3:9012005-9012024 MS.gene86118:CDS 50.0%
CTGAACCACCGTTCAATTGG+TGG - chr6.3:9012046-9012065 MS.gene86118:CDS 50.0%
CTTCATGACTCTGCCACTGA+TGG - chr6.3:9010920-9010939 MS.gene86118:intron 50.0%
GGAGTTGAAGAAGAAGGCAG+AGG - chr6.3:9012297-9012316 MS.gene86118:CDS 50.0%
GTGCTGAACCACCGTTCAAT+TGG - chr6.3:9012043-9012062 MS.gene86118:CDS 50.0%
TCCAGCACATACGCTTTCAG+TGG + chr6.3:9012101-9012120 None:intergenic 50.0%
TGGTGGAACAAGACCATCAG+TGG + chr6.3:9010936-9010955 None:intergenic 50.0%
TGGTTCAGCACTTGCTCTTG+TGG + chr6.3:9012034-9012053 None:intergenic 50.0%
! AAGCAAGTTGGAAGCGCGTA+AGG + chr6.3:9012887-9012906 None:intergenic 50.0%
! ACCACTGAAAGCGTATGTGC+TGG - chr6.3:9012097-9012116 MS.gene86118:CDS 50.0%
! GGATTGATGTGGCCTTGAAC+TGG + chr6.3:9010644-9010663 None:intergenic 50.0%
AGATGGGAGAAGCCTAGCCA+TGG + chr6.3:9013001-9013020 None:intergenic 55.0%
AGGCCTGACCTTGTCATTGG+TGG - chr6.3:9011941-9011960 MS.gene86118:CDS 55.0%
CAATGAACAACCACCAGGGC+TGG + chr6.3:9012329-9012348 None:intergenic 55.0%
CGCTTCAGCAGCGACTGAAT+TGG + chr6.3:9013230-9013249 None:intergenic 55.0%
GAGCCACCAATGACAAGGTC+AGG + chr6.3:9011947-9011966 None:intergenic 55.0%
TCCTTCCATCGCGTGAAAGC+CGG - chr6.3:9012952-9012971 MS.gene86118:CDS 55.0%
TGCAGCTCTTCGGGAAACCA+TGG + chr6.3:9012841-9012860 None:intergenic 55.0%
TGGAATGTTGCAGGTCTGGC+TGG + chr6.3:9013255-9013274 None:intergenic 55.0%
AGGGAGAGGCTGCAGCTCTT+CGG + chr6.3:9012851-9012870 None:intergenic 60.0%
GGGAGAGGCTGCAGCTCTTC+GGG + chr6.3:9012850-9012869 None:intergenic 65.0%
! GCCGGCTTTCACGCGATGGA+AGG + chr6.3:9012956-9012975 None:intergenic 65.0%
!! GGATGCCGGCTTTCACGCGA+TGG + chr6.3:9012960-9012979 None:intergenic 65.0%
GAGGAGACGACCAGCCCTGG+TGG - chr6.3:9012316-9012335 MS.gene86118:CDS 70.0%
GCAGAGGAGACGACCAGCCC+TGG - chr6.3:9012313-9012332 MS.gene86118:CDS 70.0%


Chromosome Type Strat End Strand Name
chr6.3 gene 9010590 9013310 9010590 ID=MS.gene86118
chr6.3 mRNA 9010590 9013310 9010590 ID=MS.gene86118.t1;Parent=MS.gene86118
chr6.3 exon 9012785 9013310 9012785 ID=MS.gene86118.t1.exon1;Parent=MS.gene86118.t1
chr6.3 CDS 9012785 9013310 9012785 ID=cds.MS.gene86118.t1;Parent=MS.gene86118.t1
chr6.3 exon 9011525 9012435 9011525 ID=MS.gene86118.t1.exon2;Parent=MS.gene86118.t1
chr6.3 CDS 9011525 9012435 9011525 ID=cds.MS.gene86118.t1;Parent=MS.gene86118.t1
chr6.3 exon 9010590 9010823 9010590 ID=MS.gene86118.t1.exon3;Parent=MS.gene86118.t1
chr6.3 CDS 9010590 9010823 9010590 ID=cds.MS.gene86118.t1;Parent=MS.gene86118.t1
Gene Sequence

>MS.gene86118

ATGAGTTATTTTGCTGATAATAAAAAGCCACATGCTGTGTTGATTGCATATCCAGTTCAAGGCCACATCAATCCTTTGTTCAAACTAGCAAAGATTCTTTACCTTAGAGGCTTTCACATAACATTTGTCAACACTGAATACAATCACAAACGATTGCTCAAATCAAGGGGTCCAAAAGCCTTTGACGGTTTCACCGACTTTAACTTTGAGACCATTCCAGATGGTTTAACACCAACGGAAGGTGATGGTGATGTTAGTCAAGACATTATCTCTCTTACTGATTCAATAAGGAAGAATTTCTATCAACCCTTTTGTGAACTTCTTGCCAAACTTCATGACTCTGCCACTGATGGTCTTGTTCCACCAGTTACTTGCTTAGTTTCTGATTGTTACATGTCATTTACAATACAAGCTGCTGAAGAGCATGCACTCCCAATTGTTTTCTTCTCTCCAGCTAGTGCAAGTACCTTCTTGTCTGTTTTACACTTTCGTACACTGTTTGAGAAAGGTCTAATACCACTCAAAGGTAACAATTTGTGATCATTTTTACGAGGAGACAAAAAGTTACTCCGGAAGTAATTCTGAAAAGAGTTATTCTACTTAATAACTCAATATAAAACATGAATTTCAGCTATATAATATGATAGTAAACATTTACTTATATTCAAAAAGATATAATTATAGTTCATTTGAAGTTATCTAATAAATTATCTAATTGTTTAAAATAAGTTGAGTTGATATACTCAATAAGAAATTTTGATTTGACGGTTGGATTGATAAAATCTGATGTTTACAATGAGTTACTAAGCGGAATAGTAAAAATATGTATTTATATGAAGCTCTAAGCTATTGACTTTTGCAATTATGACAAGCAGATAAGAGCTATCTGACAAATGGATATCTGGACACCAAAGTAGACTGTATTCCTGGATTGAAGAACTTTCGGTTAAAGGATTTGCCCGACTTTATAAGGATTACAGACCCAAATGATGTCATGGTAGAATTTCTCATTGAAGCGGCAGAACGATTTCACAGAGCCTCTGCTATTATTTTTAACACTTGTAATGAAATTGAGAGCGATGTTCTTAATGAGCTCTATTCTATGTTCCCATCTTTGTATACTGTTGGACCTTTACCTTCATTATTAAATCAAACTCCACATAATCACTTGGAATCTTTAGGTTCCAATCTATGGAAAGAAGATATCAAGTGTCTTGAATGGCTTGAATCCAAGGAGCCTGAGTCTGTTGTTTATGTGAATTTTGGCAGCATTACAGTTATGACTCCAGATCAACTGTTAGAGTTTGCTTGGGGATTGGTCAATAGCAAGAAACCCTTTTTGTGGATCATTAGGCCTGACCTTGTCATTGGTGGCTCGTTTATTTTGTCATCTGAGTTTGAGAATGAAATTTCAGATAGAGGACTAATCGCGAGCTGGTGTCCACAAGAGCAAGTGCTGAACCACCGTTCAATTGGTGGATTCTTGACTCATTGTGGATGGAACTCAACCACTGAAAGCGTATGTGCTGGAGTTCCAATGTTGTGTTGGCCTTTTTTTGCCGATCAGCCAACAAACTGTAGATATATCTGCAAAACATGGGAGATTGGAATCGAAATCGATACTAATGTGAAAAGAGAGGAGGTGGCGAATCTGATCAATGAATTGATGTCAGGAGATAATGGAAAGATGATGAGTCGAAAGGTCATGGAGTTGAAGAAGAAGGCAGAGGAGACGACCAGCCCTGGTGGTTGTTCATTGATGAACTTGGACAAAGTTATTAAGGAGGTCATGCTCAAACAATACTAGATTAAAGTGATTTATCCCAGGAAATGTGGTTGTGTTATCTTCTCATGAATTTATTTTATTGTCAAAAAAATAATGATGCATATAGTGTGAGGTGCTATTTATATTTAAAATGTAAGCCATATAAGTGGAACTTATTATGTCATTTTAGTTCAATATAAATAATGATACATATAATTGTATGAAATTCATTTATATATATACTGATAATAGTTATGATCTACACATGGCATATATGCTTGTGCCATCCATCTGTTTTGCTGTATATCTTTAGCTTGTCTCATATATTTTGAATGTAGGTATGCAAAGAAAAATCACATACTGATTCTTGATTTGTTGGCTTCAAAGCTATGATTTATAGTAGCCAGCATATCCTAAAGGTTTTGGTAGTTTTAGAATCTGCATTGGGGTACAGAATAGTGGCCGAAACATACACATTATTTACCATGGTTTCCCGAAGAGCTGCAGCCTCTCCCTCTTCATTTGTCATCCTTACGCGCTTCCAACTTGCTTGAGAAAGCATGAAATTGCCATTACACAGAAGCTCATACTCATAGCTCCTTCCATCGCGTGAAAGCCGGCATCCACATTACATTTAAGTCAACCATGGCTAGGCTTCTCCCATCTCAAAATATGACCAGTTCTGGTAATGTGGCTGCTACTGTTTTGCATTAAATTTACAGCCTACTACTCCATCCTGCTACATATTGTACGAATTGATACCCAATTATTTTGGTTCTGCCAAATTGTCAACACTAGCATTGCTACACGGCCTGCAATACAACAATCCTCACTTCTTGCAATATCCATCAGATGTCCTTTGCATAACTGCACCAATTCAGTCGCTGCTGAAGCGTACCAGCCAGACCTGCAACATTCCAACAATCTTTGATTTAGTGAAGTCTGAAGGACACTGA
Protein sequence

>MS.gene86118.t1

MSYFADNKKPHAVLIAYPVQGHINPLFKLAKILYLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFETIPDGLTPTEGDGDVSQDIISLTDSIRKNFYQPFCELLAKLHDSATDGLVPPVTCLVSDCYMSFTIQAAEEHALPIVFFSPASASTFLSVLHFRTLFEKGLIPLKDKSYLTNGYLDTKVDCIPGLKNFRLKDLPDFIRITDPNDVMVEFLIEAAERFHRASAIIFNTCNEIESDVLNELYSMFPSLYTVGPLPSLLNQTPHNHLESLGSNLWKEDIKCLEWLESKEPESVVYVNFGSITVMTPDQLLEFAWGLVNSKKPFLWIIRPDLVIGGSFILSSEFENEISDRGLIASWCPQEQVLNHRSIGGFLTHCGWNSTTESVCAGVPMLCWPFFADQPTNCRYICKTWEIGIEIDTNVKREEVANLINELMSGDNGKMMSRKVMELKKKAEETTSPGGCSLMNLDKVIKEPTTPSCYILYELIPNYFGSAKLSTLALLHGLQYNNPHFLQYPSDVLCITAPIQSLLKRTSQTCNIPTIFDLVKSEGH