AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene031165

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene031165.t1 MTR_6g014290 91.925 483 37 2 1 482 1 482 0.0 925
MS.gene031165.t1 MTR_3g008010 88.820 483 52 2 1 482 1 482 0.0 886
MS.gene031165.t1 MTR_6g014250 86.957 483 61 2 1 482 1 482 0.0 876
MS.gene031165.t1 MTR_6g014220 82.121 481 84 2 1 480 1 480 0.0 833
MS.gene031165.t1 MTR_6g014170 80.952 483 74 3 1 482 1 466 0.0 803
MS.gene031165.t1 MTR_6g014040 74.333 487 118 5 1 482 1 485 0.0 754
MS.gene031165.t1 MTR_6g014020 73.251 486 124 4 1 482 1 484 0.0 749
MS.gene031165.t1 MTR_6g013440 73.251 486 123 5 1 481 1 484 0.0 737
MS.gene031165.t1 MTR_6g014050 75.975 487 110 5 1 482 1 485 0.0 734
MS.gene031165.t1 MTR_0288s0020 73.457 486 102 4 1 481 1 464 0.0 729
MS.gene031165.t1 MTR_8g059425 72.577 485 127 4 1 482 1 482 0.0 728
MS.gene031165.t1 MTR_6g014310 73.868 486 120 5 1 481 1 484 0.0 725
MS.gene031165.t1 MTR_6g014270 71.959 485 128 4 4 482 1 483 0.0 722
MS.gene031165.t1 MTR_6g013450 70.782 486 135 5 1 481 1 484 0.0 710
MS.gene031165.t1 MTR_6g014200 73.181 481 123 4 4 480 1 479 0.0 707
MS.gene031165.t1 MTR_6g014150 71.429 483 132 4 4 482 1 481 0.0 699
MS.gene031165.t1 MTR_6g013960 68.724 486 146 4 1 482 1 484 0.0 697
MS.gene031165.t1 MTR_6g011340 71.546 485 132 4 1 481 1 483 0.0 694
MS.gene031165.t1 MTR_6g014300 68.994 487 127 6 1 481 1 469 0.0 689
MS.gene031165.t1 MTR_6g014187 68.930 486 145 4 1 482 1 484 0.0 688
MS.gene031165.t1 MTR_6g013900 68.660 485 147 3 1 482 1 483 0.0 672
MS.gene031165.t1 MTR_6g013990 70.248 484 136 5 1 480 1 480 0.0 667
MS.gene031165.t1 MTR_5g058320 67.495 483 140 5 1 481 1 468 0.0 662
MS.gene031165.t1 MTR_7g011470 68.660 485 132 6 1 481 1 469 0.0 655
MS.gene031165.t1 MTR_6g013920 66.736 484 156 3 1 481 1 482 0.0 654
MS.gene031165.t1 MTR_7g011470 67.835 485 132 5 1 481 1 465 0.0 648
MS.gene031165.t1 MTR_6g014240 65.417 480 136 5 4 482 1 451 0.0 628
MS.gene031165.t1 MTR_6g014186 63.202 481 133 5 4 480 1 441 0.0 618
MS.gene031165.t1 MTR_5g464810 59.746 472 186 4 10 480 12 480 0.0 595
MS.gene031165.t1 MTR_5g064240 59.746 472 186 4 10 480 12 480 0.0 595
MS.gene031165.t1 MTR_5g464760 57.851 484 196 6 1 479 1 481 0.0 580
MS.gene031165.t1 MTR_0036s0220 56.568 472 201 4 9 479 11 479 0.0 568
MS.gene031165.t1 MTR_6g013680 64.965 431 93 7 55 481 2 378 0.0 543
MS.gene031165.t1 MTR_2g008210 53.556 478 214 4 5 479 6 478 0.0 538
MS.gene031165.t1 MTR_8g043470 61.176 425 113 4 59 482 9 382 0.0 512
MS.gene031165.t1 MTR_3g079480 51.261 476 226 6 6 478 17 489 2.92e-179 511
MS.gene031165.t1 MTR_3g479490 50.105 475 233 4 6 478 2 474 2.81e-178 508
MS.gene031165.t1 MTR_3g479520 49.684 475 235 4 6 478 11 483 5.90e-175 500
MS.gene031165.t1 MTR_4g094220 51.163 473 223 5 8 474 5 475 3.99e-171 490
MS.gene031165.t1 MTR_0477s0010 66.292 356 83 3 127 481 1 320 1.35e-166 473
MS.gene031165.t1 MTR_6g014160 54.115 486 130 9 1 482 1 397 9.20e-165 471
MS.gene031165.t1 MTR_3g479470 47.992 473 243 3 6 477 9 479 1.44e-158 459
MS.gene031165.t1 MTR_6g014190 71.331 293 82 2 190 482 1 291 1.08e-156 446
MS.gene031165.t1 MTR_0199s0010 78.868 265 54 2 1 264 1 264 3.07e-150 430
MS.gene031165.t1 MTR_8g007585 87.500 208 25 1 275 482 190 396 5.84e-132 387
MS.gene031165.t1 MTR_8g007585 85.789 190 25 2 1 189 1 189 5.70e-114 342
MS.gene031165.t1 MTR_6g014185 51.620 432 102 9 47 478 21 345 3.09e-130 382
MS.gene031165.t1 MTR_6g013435 57.584 356 104 7 127 481 1 310 6.31e-127 372
MS.gene031165.t1 MTR_3g479610 52.063 315 146 5 167 478 1 313 9.91e-114 338
MS.gene031165.t1 MTR_0891s0010 48.797 291 146 3 190 478 1 290 1.78e-100 303
MS.gene031165.t1 MTR_5g066390 84.049 163 25 1 320 482 58 219 2.49e-97 292
MS.gene031165.t1 MTR_6g013890 54.110 292 74 6 167 453 19 255 4.03e-96 291
MS.gene031165.t1 MTR_6g014195 67.179 195 60 2 1 191 1 195 4.39e-91 276
MS.gene031165.t1 MTR_3g069710 35.443 474 264 15 12 478 14 452 1.35e-88 278
MS.gene031165.t1 MTR_5g031840 33.333 477 291 14 9 477 4 461 9.36e-83 263
MS.gene031165.t1 MTR_5g031860 34.029 479 286 13 9 477 11 469 4.77e-81 259
MS.gene031165.t1 MTR_3g069690 33.895 475 272 14 12 478 10 450 1.57e-78 252
MS.gene031165.t1 MTR_5g031830 33.194 479 291 12 9 477 11 470 5.80e-77 249
MS.gene031165.t1 MTR_1g107380 31.493 489 289 13 10 479 13 474 5.80e-76 246
MS.gene031165.t1 MTR_4g064987 32.427 478 275 13 12 478 10 450 2.58e-75 244
MS.gene031165.t1 MTR_7g013200 33.117 462 269 11 9 466 4 429 7.19e-74 239
MS.gene031165.t1 MTR_7g013180 31.646 474 270 13 1 458 1 436 9.93e-73 237
MS.gene031165.t1 MTR_7g013240 32.211 475 270 13 9 474 5 436 9.99e-73 237
MS.gene031165.t1 MTR_6g038240 31.340 485 291 16 6 481 7 458 7.44e-72 235
MS.gene031165.t1 MTR_7g013260 32.909 471 273 11 9 474 5 437 1.96e-71 233
MS.gene031165.t1 MTR_4g064987 31.799 478 272 13 12 478 10 444 5.66e-71 232
MS.gene031165.t1 MTR_7g013220 31.983 469 276 12 9 466 4 440 8.40e-71 232
MS.gene031165.t1 MTR_7g080935 32.009 453 273 12 8 455 9 431 6.61e-70 230
MS.gene031165.t1 MTR_2086s0010 57.225 173 72 2 307 478 1 172 3.99e-69 218
MS.gene031165.t1 MTR_1996s0010 57.225 173 72 2 307 478 1 172 3.99e-69 218
MS.gene031165.t1 MTR_5g035580 31.381 478 283 13 6 474 9 450 1.04e-68 227
MS.gene031165.t1 MTR_1g107350 29.960 494 287 15 10 477 8 468 1.20e-68 227
MS.gene031165.t1 MTR_7g080940 31.798 456 270 15 8 455 9 431 1.89e-68 226
MS.gene031165.t1 MTR_4g094920 31.237 493 297 16 5 482 19 484 6.42e-68 226
MS.gene031165.t1 MTR_7g080950 30.271 479 292 13 8 478 4 448 6.84e-68 224
MS.gene031165.t1 MTR_4g095008 30.453 486 294 15 12 482 13 469 2.09e-67 226
MS.gene031165.t1 MTR_8g064870 31.237 493 280 17 12 477 13 473 3.55e-67 223
MS.gene031165.t1 MTR_3g049970 29.918 488 295 12 10 477 9 469 5.40e-67 223
MS.gene031165.t1 MTR_8g083290 31.846 493 283 18 9 478 2 464 2.14e-66 221
MS.gene031165.t1 MTR_6g038230 30.591 474 295 15 6 474 7 451 4.76e-65 217
MS.gene031165.t1 MTR_0475s0020 75.758 132 27 2 1 127 1 132 6.35e-65 209
MS.gene031165.t1 MTR_6g038300 31.250 480 289 16 9 479 10 457 2.95e-64 215
MS.gene031165.t1 MTR_5g035560 30.290 482 291 14 6 478 7 452 4.85e-64 216
MS.gene031165.t1 MTR_1g107360 30.816 490 291 15 5 477 3 461 3.45e-63 213
MS.gene031165.t1 MTR_6g014000 72.519 131 35 1 348 478 27 156 7.62e-63 212
MS.gene031165.t1 MTR_1g107375 30.041 486 282 17 10 477 8 453 1.41e-62 211
MS.gene031165.t1 MTR_1g032490 30.579 484 297 13 10 477 10 470 1.52e-62 211
MS.gene031165.t1 MTR_1g107365 30.645 496 278 18 5 477 39 491 1.61e-62 212
MS.gene031165.t1 MTR_1g107315 31.568 491 299 14 1 477 1 468 3.29e-62 210
MS.gene031165.t1 MTR_8g088560 30.803 461 286 14 10 463 10 444 1.53e-61 208
MS.gene031165.t1 MTR_5g016480 31.746 504 290 21 4 482 1 475 4.01e-61 207
MS.gene031165.t1 MTR_3g084540 32.245 490 288 17 10 477 6 473 4.36e-61 207
MS.gene031165.t1 MTR_6g038200 29.895 475 297 17 6 474 7 451 1.21e-60 206
MS.gene031165.t1 MTR_8g064880 30.022 463 276 14 12 450 11 449 2.19e-60 206
MS.gene031165.t1 MTR_6g038220 30.290 482 285 18 6 474 7 450 8.85e-60 203
MS.gene031165.t1 MTR_3g084530 31.481 486 296 15 10 477 6 472 1.20e-58 201
MS.gene031165.t1 MTR_3g084520 31.440 493 287 19 10 477 6 472 1.25e-58 201
MS.gene031165.t1 MTR_7g070610 28.800 500 298 13 10 477 13 486 8.02e-58 199
MS.gene031165.t1 MTR_5g075440 29.796 490 280 16 10 478 10 456 3.07e-57 196
MS.gene031165.t1 MTR_1g107285 28.482 481 302 11 12 477 10 463 3.91e-57 197
MS.gene031165.t1 MTR_8g083280 31.034 493 275 16 12 478 9 462 7.14e-57 196
MS.gene031165.t1 MTR_7g071040 28.628 503 305 13 5 477 12 490 5.49e-56 194
MS.gene031165.t1 MTR_7g080900 29.228 479 289 18 5 470 7 448 5.58e-56 193
MS.gene031165.t1 MTR_3g479620 50.303 165 81 1 6 170 2 165 7.79e-56 184
MS.gene031165.t1 MTR_7g070800 27.767 497 303 15 10 477 6 475 1.52e-54 190
MS.gene031165.t1 MTR_7g055710 27.833 503 296 12 10 476 11 482 2.46e-54 190
MS.gene031165.t1 MTR_5g045960 27.324 527 296 16 4 482 3 490 6.06e-54 189
MS.gene031165.t1 MTR_3g031450 31.185 481 273 16 10 478 18 452 1.92e-53 187
MS.gene031165.t1 MTR_5g072810 28.926 484 286 15 10 477 12 453 3.77e-53 186
MS.gene031165.t1 MTR_3g031400 30.146 481 276 16 10 478 18 450 4.32e-52 183
MS.gene031165.t1 MTR_7g102450 28.743 501 296 15 9 482 10 476 4.53e-52 183
MS.gene031165.t1 MTR_7g070860 27.071 495 303 15 6 477 3 462 4.69e-52 183
MS.gene031165.t1 MTR_7g070660 27.071 495 308 13 10 477 11 479 5.47e-52 183
MS.gene031165.t1 MTR_5g072860 29.400 483 293 17 10 478 18 466 6.40e-52 182
MS.gene031165.t1 MTR_6g033725 30.857 350 216 9 132 473 126 457 1.67e-51 182
MS.gene031165.t1 MTR_5g098960 27.646 463 281 14 7 452 4 429 1.78e-51 181
MS.gene031165.t1 MTR_7g070910 28.088 502 309 15 5 477 6 484 1.91e-51 182
MS.gene031165.t1 MTR_8g027870 28.602 472 275 14 9 455 17 451 2.79e-51 181
MS.gene031165.t1 MTR_7g102490 29.354 511 295 17 8 480 7 489 7.12e-51 181
MS.gene031165.t1 MTR_4g485630 25.820 488 327 10 6 477 5 473 1.70e-50 179
MS.gene031165.t1 MTR_0184s0030 27.273 484 293 12 10 466 6 457 2.07e-50 179
MS.gene031165.t1 MTR_7g070930 27.634 503 310 15 5 477 9 487 2.81e-50 179
MS.gene031165.t1 MTR_7g070740 27.038 503 312 15 5 477 6 483 3.40e-50 179
MS.gene031165.t1 MTR_4g008630 28.367 490 284 17 12 477 16 462 4.02e-50 177
MS.gene031165.t1 MTR_8g027885 28.118 473 276 14 9 455 17 451 4.28e-50 178
MS.gene031165.t1 MTR_8g009063 27.075 506 302 14 3 480 6 472 1.08e-49 177
MS.gene031165.t1 MTR_5g072830 27.178 482 294 14 10 477 10 448 1.18e-49 176
MS.gene031165.t1 MTR_7g117170 29.132 484 267 17 9 457 14 456 2.76e-49 176
MS.gene031165.t1 MTR_8g009050 30.914 372 212 9 117 466 108 456 3.11e-49 175
MS.gene031165.t1 MTR_8g009073 28.400 500 287 15 10 480 6 463 3.67e-49 175
MS.gene031165.t1 MTR_6g033625 29.577 497 297 18 8 482 2 467 3.99e-49 175
MS.gene031165.t1 MTR_8g009055 28.889 495 293 16 10 480 6 465 4.84e-49 175
MS.gene031165.t1 MTR_0184s0040 28.514 498 286 15 10 476 21 479 4.84e-49 175
MS.gene031165.t1 MTR_0078s0190 28.514 498 286 15 10 476 21 479 4.84e-49 175
MS.gene031165.t1 MTR_7g070780 27.565 497 307 16 10 477 11 483 6.00e-49 175
MS.gene031165.t1 MTR_4g108250 27.875 513 299 17 5 477 6 487 9.24e-49 175
MS.gene031165.t1 MTR_5g072840 27.329 483 294 14 10 478 10 449 1.37e-48 173
MS.gene031165.t1 MTR_6g033615 31.728 353 204 10 132 475 124 448 1.45e-48 173
MS.gene031165.t1 MTR_7g117405 30.137 511 282 21 6 478 8 481 1.49e-48 174
MS.gene031165.t1 MTR_6g033660 29.888 358 208 10 132 473 129 459 1.76e-48 174
MS.gene031165.t1 MTR_1g019510 28.858 499 285 15 10 480 6 462 3.20e-48 172
MS.gene031165.t1 MTR_8g006710 29.150 494 273 20 6 464 2 453 4.36e-48 172
MS.gene031165.t1 MTR_8g008990 28.628 503 286 17 10 480 6 467 1.29e-47 171
MS.gene031165.t1 MTR_5g072820 27.593 482 292 15 10 477 10 448 6.39e-47 169
MS.gene031165.t1 MTR_8g009067 29.765 383 223 10 117 480 108 463 1.01e-46 169
MS.gene031165.t1 MTR_6g005600 29.234 496 279 20 8 470 4 460 1.33e-46 168
MS.gene031165.t1 MTR_4g024020 28.462 520 293 14 8 482 7 492 2.25e-46 168
MS.gene031165.t1 MTR_0078s0010 26.494 502 300 15 7 477 3 466 4.38e-46 167
MS.gene031165.t1 MTR_8g009067 30.055 366 210 10 134 480 7 345 4.71e-46 164
MS.gene031165.t1 MTR_8g008970 27.202 511 279 17 10 480 6 463 6.88e-46 171
MS.gene031165.t1 MTR_8g008970 32.847 274 156 7 215 480 534 787 3.05e-34 137
MS.gene031165.t1 MTR_5g087620 26.834 518 315 20 1 478 1 494 7.08e-46 167
MS.gene031165.t1 MTR_5g045970 27.006 511 298 16 10 478 16 493 1.13e-45 166
MS.gene031165.t1 MTR_6g023665 28.033 478 278 15 7 455 10 450 1.18e-45 166
MS.gene031165.t1 MTR_8g009073 32.493 357 195 11 143 480 5 334 1.70e-45 162
MS.gene031165.t1 MTR_7g047030 26.535 505 296 15 7 477 3 466 3.47e-45 164
MS.gene031165.t1 MTR_7g047270 26.535 505 296 15 7 477 3 466 3.47e-45 164
MS.gene031165.t1 MTR_8g006260 27.479 484 276 16 8 455 4 448 1.02e-44 163
MS.gene031165.t1 MTR_7g070940 27.559 508 292 20 6 477 5 472 1.02e-44 164
MS.gene031165.t1 MTR_1g062380 25.825 515 300 17 10 478 16 494 1.87e-44 163
MS.gene031165.t1 MTR_8g006730 27.699 491 285 20 6 464 2 454 1.99e-44 162
MS.gene031165.t1 MTR_7g046490 31.897 348 193 10 130 457 121 444 2.11e-44 162
MS.gene031165.t1 MTR_6g488280 26.471 476 278 16 12 455 8 443 2.25e-44 162
MS.gene031165.t1 MTR_0428s0010 26.471 476 278 16 12 455 8 443 2.25e-44 162
MS.gene031165.t1 MTR_7g102460 28.794 514 292 21 8 480 7 487 2.51e-44 163
MS.gene031165.t1 MTR_7g102560 27.944 501 304 19 10 478 9 484 6.49e-44 161
MS.gene031165.t1 MTR_1g029540 26.186 485 292 18 15 477 19 459 1.26e-43 160
MS.gene031165.t1 MTR_8g066610 27.071 495 308 15 10 477 9 477 1.99e-43 160
MS.gene031165.t1 MTR_6g033675 25.880 483 309 14 12 473 6 460 2.19e-43 160
MS.gene031165.t1 MTR_7g102550 27.432 514 309 16 1 478 1 486 4.39e-43 159
MS.gene031165.t1 MTR_7g070810 25.451 499 301 15 14 477 13 475 4.51e-43 159
MS.gene031165.t1 MTR_5g090670 26.848 514 300 16 7 480 2 479 9.76e-43 158
MS.gene031165.t1 MTR_4g031800 26.157 497 293 15 13 474 12 469 2.18e-42 157
MS.gene031165.t1 MTR_8g077590 29.250 400 234 11 75 452 70 442 4.44e-42 156
MS.gene031165.t1 MTR_5g090700 26.863 510 301 17 7 478 2 477 6.66e-42 155
MS.gene031165.t1 MTR_5g067170 27.181 493 302 16 14 477 15 479 7.17e-42 155
MS.gene031165.t1 MTR_0078s0060 26.347 501 295 14 10 477 6 465 4.17e-41 153
MS.gene031165.t1 MTR_8g012650 31.507 365 201 10 117 455 109 450 4.44e-41 153
MS.gene031165.t1 MTR_8g465670 27.856 499 275 17 7 464 4 458 9.17e-41 152
MS.gene031165.t1 MTR_5g090660 25.845 503 311 17 7 478 2 473 9.90e-41 154
MS.gene031165.t1 MTR_5g070090 27.105 487 308 15 6 477 7 461 1.02e-40 152
MS.gene031165.t1 MTR_8g090095 26.132 486 300 16 15 477 30 479 1.30e-40 152
MS.gene031165.t1 MTR_2g035020 26.908 498 299 19 14 477 15 481 4.02e-40 151
MS.gene031165.t1 MTR_8g006270 26.559 497 301 15 7 476 3 462 4.78e-40 150
MS.gene031165.t1 MTR_5g090630 26.253 499 307 14 7 478 2 466 5.09e-40 150
MS.gene031165.t1 MTR_5g040030 24.297 498 319 12 12 477 16 487 6.91e-40 150
MS.gene031165.t1 MTR_7g071050 25.153 489 252 13 5 456 8 419 7.41e-40 149
MS.gene031165.t1 MTR_8g012635 30.151 398 219 12 83 455 87 450 1.05e-39 149
MS.gene031165.t1 MTR_8g007565 28.009 457 289 16 10 450 7 439 1.11e-39 149
MS.gene031165.t1 MTR_8g012745 28.463 397 224 12 83 455 87 447 1.85e-39 149
MS.gene031165.t1 MTR_4g128720 25.514 486 305 13 7 477 12 455 2.17e-39 148
MS.gene031165.t1 MTR_8g007650 28.009 457 289 16 10 450 7 439 2.73e-39 148
MS.gene031165.t1 MTR_5g090620 24.506 506 309 15 7 474 2 472 5.24e-39 147
MS.gene031165.t1 MTR_0009s0240 27.542 472 277 23 5 450 2 434 6.49e-39 147
MS.gene031165.t1 MTR_5g019580 26.027 511 306 20 4 476 1 477 2.47e-38 146
MS.gene031165.t1 MTR_4g117890 26.263 495 291 15 14 474 17 471 2.67e-38 145
MS.gene031165.t1 MTR_6g042310 28.884 457 279 18 10 453 18 441 3.18e-38 145
MS.gene031165.t1 MTR_5g098930 26.285 506 300 16 7 478 2 468 3.63e-38 145
MS.gene031165.t1 MTR_3g009510 26.514 479 291 13 12 457 7 457 4.34e-38 145
MS.gene031165.t1 MTR_4g128690 27.766 479 294 15 10 477 15 452 4.72e-38 144
MS.gene031165.t1 MTR_5g016660 24.704 506 315 17 8 477 8 483 6.17e-38 145
MS.gene031165.t1 MTR_4g485620 26.240 484 295 18 24 477 3 454 7.84e-38 144
MS.gene031165.t1 MTR_2g034990 26.613 496 303 18 14 477 15 481 8.74e-38 144
MS.gene031165.t1 MTR_5g070040 28.660 485 300 17 7 474 8 463 9.21e-38 144
MS.gene031165.t1 MTR_5g066410 26.786 448 285 12 13 450 1 415 1.14e-37 143
MS.gene031165.t1 MTR_5g090580 25.247 507 311 16 7 478 2 475 1.86e-37 143
MS.gene031165.t1 MTR_8g071070 25.933 509 307 17 4 481 1 470 1.91e-37 143
MS.gene031165.t1 MTR_8g012630 39.062 192 97 4 284 455 203 394 4.85e-37 141
MS.gene031165.t1 MTR_0536s0020 26.176 489 305 12 14 477 22 479 5.11e-37 142
MS.gene031165.t1 MTR_4g117960 26.285 506 301 20 14 482 15 485 1.42e-36 141
MS.gene031165.t1 MTR_8g074550 26.121 513 298 18 10 475 8 486 1.60e-36 141
MS.gene031165.t1 MTR_5g090600 26.518 494 300 16 7 478 2 454 1.69e-36 140
MS.gene031165.t1 MTR_5g004940 34.310 239 137 6 243 477 155 377 1.72e-36 139
MS.gene031165.t1 MTR_8g012730 39.683 189 94 4 287 455 99 287 2.77e-36 136
MS.gene031165.t1 MTR_2g098430 25.572 481 289 15 7 452 3 449 3.79e-36 140
MS.gene031165.t1 MTR_7g102520 26.733 505 307 21 10 478 12 489 4.39e-36 140
MS.gene031165.t1 MTR_7g067120 28.200 461 257 18 7 453 6 406 5.05e-36 139
MS.gene031165.t1 MTR_5g090610 25.349 501 296 17 7 474 2 457 5.26e-36 139
MS.gene031165.t1 MTR_2g008226 27.389 471 302 17 1 454 1 448 5.76e-36 139
MS.gene031165.t1 MTR_4g118000 26.423 492 293 16 14 477 16 466 6.39e-36 139
MS.gene031165.t1 MTR_7g067330 27.826 460 260 17 7 453 6 406 7.16e-36 138
MS.gene031165.t1 MTR_7g012120 26.358 497 300 20 14 477 20 483 1.10e-35 139
MS.gene031165.t1 MTR_5g039900 24.644 491 323 16 12 477 15 483 1.62e-35 138
MS.gene031165.t1 MTR_1g040310 25.918 490 318 17 11 477 16 483 2.31e-35 138
MS.gene031165.t1 MTR_1g019520 37.879 198 106 4 283 463 2 199 2.35e-35 131
MS.gene031165.t1 MTR_5g019580 31.271 291 159 11 215 476 223 501 2.40e-35 138
MS.gene031165.t1 MTR_8g006220 26.960 523 277 19 7 474 3 475 2.57e-35 137
MS.gene031165.t1 MTR_7g470610 30.100 299 175 7 129 423 5 273 3.82e-35 133
MS.gene031165.t1 MTR_7g070583 30.100 299 175 7 129 423 5 273 3.82e-35 133
MS.gene031165.t1 MTR_5g029800 26.761 497 297 18 14 477 15 477 5.19e-35 137
MS.gene031165.t1 MTR_4g117950 27.327 505 276 21 13 477 9 462 6.48e-35 136
MS.gene031165.t1 MTR_6g035295 25.000 500 314 18 11 477 13 484 2.33e-34 135
MS.gene031165.t1 MTR_7g070870 25.358 489 287 18 14 477 23 458 1.03e-33 132
MS.gene031165.t1 MTR_4g123553 27.409 467 284 21 5 453 9 438 1.12e-33 132
MS.gene031165.t1 MTR_2g046820 27.749 382 225 10 118 477 110 462 1.14e-33 132
MS.gene031165.t1 MTR_2g046750 25.000 496 313 12 8 477 3 465 1.17e-33 132
MS.gene031165.t1 MTR_2g035040 26.598 391 236 13 120 482 24 391 2.22e-33 130
MS.gene031165.t1 MTR_4g082820 27.699 491 296 18 10 476 7 462 2.85e-33 131
MS.gene031165.t1 MTR_6g035185 24.056 503 310 16 13 477 14 482 3.93e-33 131
MS.gene031165.t1 MTR_4g485640 29.393 313 185 12 187 475 364 664 5.18e-33 133
MS.gene031165.t1 MTR_4g485590 26.291 426 245 14 10 419 9 381 1.05e-32 129
MS.gene031165.t1 MTR_8g044140 27.062 388 226 14 121 477 87 448 2.37e-32 129
MS.gene031165.t1 MTR_6g078320 25.455 495 314 16 10 476 11 478 9.04e-32 127
MS.gene031165.t1 MTR_6g035265 24.950 497 302 18 14 477 15 473 2.01e-31 126
MS.gene031165.t1 MTR_2g059240 25.205 488 325 16 6 479 9 470 2.17e-31 126
MS.gene031165.t1 MTR_4g117980 24.851 503 303 18 14 477 15 481 2.39e-31 126
MS.gene031165.t1 MTR_4g082810 28.431 306 184 10 119 409 110 395 5.74e-31 124
MS.gene031165.t1 MTR_2g040530 26.455 378 235 9 118 477 112 464 1.03e-30 124
MS.gene031165.t1 MTR_5g072850 30.851 282 165 9 157 432 90 347 1.74e-30 122
MS.gene031165.t1 MTR_8g466240 24.850 499 295 17 8 477 6 453 2.82e-29 120
MS.gene031165.t1 MTR_2g046620 25.157 477 282 17 5 453 10 439 3.81e-29 120
MS.gene031165.t1 MTR_2g008225 25.532 470 293 17 5 453 10 443 4.21e-29 119
MS.gene031165.t1 MTR_6g036650 25.424 472 298 17 3 453 10 448 1.19e-28 118
MS.gene031165.t1 MTR_8g068340 24.726 457 306 14 10 452 12 444 1.31e-28 118
MS.gene031165.t1 MTR_0536s0010 25.800 500 295 17 13 481 24 478 1.49e-28 118
MS.gene031165.t1 MTR_7g039550 31.967 244 143 7 252 477 23 261 3.07e-28 113
MS.gene031165.t1 MTR_5g027210 30.242 248 148 7 220 442 205 452 6.64e-28 116
MS.gene031165.t1 MTR_8g032950 23.307 502 314 17 12 477 14 480 1.29e-27 115
MS.gene031165.t1 MTR_0475s0030 72.308 65 18 0 369 433 11 75 1.51e-27 106
MS.gene031165.t1 MTR_8g068360 24.681 470 289 18 10 452 12 443 4.42e-27 114
MS.gene031165.t1 MTR_2g008220 26.327 471 300 19 1 453 1 442 7.51e-27 113
MS.gene031165.t1 MTR_1g107325 40.769 130 70 2 354 477 224 352 8.46e-27 111
MS.gene031165.t1 MTR_8g009840 34.328 201 105 6 300 480 331 524 1.31e-26 113
MS.gene031165.t1 MTR_7g080960 23.625 491 303 18 5 458 7 462 1.33e-26 112
MS.gene031165.t1 MTR_3g009490 33.333 168 90 5 311 457 3 169 9.02e-26 104
MS.gene031165.t1 MTR_7g070760 30.964 197 101 4 229 419 34 201 1.40e-25 104
MS.gene031165.t1 MTR_3g435310 34.286 175 102 5 287 453 228 397 1.48e-25 108
MS.gene031165.t1 MTR_8g068330 24.947 473 285 17 10 452 8 440 1.52e-25 109
MS.gene031165.t1 MTR_5g090690 27.273 319 170 10 82 387 36 305 1.13e-22 100
MS.gene031165.t1 MTR_7g070995 35.766 137 73 3 355 477 9 144 4.30e-22 93.2
MS.gene031165.t1 MTR_4g077960 24.944 445 292 17 20 453 2 415 5.24e-22 98.6
MS.gene031165.t1 MTR_1g090270 23.237 482 286 17 6 453 11 442 1.46e-20 94.7
MS.gene031165.t1 MTR_0078s0200 24.699 332 208 8 10 331 6 305 1.46e-18 86.7
MS.gene031165.t1 MTR_8g056740 30.460 174 110 4 283 450 166 334 1.47e-18 87.8
MS.gene031165.t1 MTR_6g013970 55.556 81 27 3 127 202 39 115 3.09e-17 80.9
MS.gene031165.t1 MTR_0536s0030 32.847 137 77 3 355 477 216 351 8.07e-17 82.4
MS.gene031165.t1 MTR_4g079250 27.234 235 152 8 259 482 236 462 1.29e-16 82.4
MS.gene031165.t1 MTR_4g059370 28.889 180 115 5 287 453 190 369 1.02e-15 79.3
MS.gene031165.t1 MTR_4g079270 28.272 191 125 5 273 453 247 435 1.80e-15 79.0
MS.gene031165.t1 MTR_8g006230 27.686 242 146 8 118 354 52 269 9.51e-14 72.0
MS.gene031165.t1 MTR_1g090280 28.395 162 103 5 305 453 131 292 2.64e-13 71.2
MS.gene031165.t1 MTR_6g015160 50.943 53 25 1 371 422 30 82 7.47e-13 64.7
MS.gene031165.t1 MTR_2g014900 26.163 172 114 5 287 447 258 427 1.04e-12 70.5
MS.gene031165.t1 MTR_2g083480 29.050 179 116 5 285 458 257 429 1.94e-12 69.3
MS.gene031165.t1 MTR_2g083430 27.869 183 122 5 281 453 253 435 3.28e-12 68.9
MS.gene031165.t1 MTR_7g106850 72.973 37 9 1 15 50 144 180 3.82e-12 65.5
MS.gene031165.t1 MTR_5g058330 54.237 59 26 1 211 268 11 69 1.42e-11 60.8
MS.gene031165.t1 MTR_8g028755 28.916 166 85 5 281 445 97 230 1.99e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene031165.t1 AT1G22360 57.261 482 204 2 1 481 1 481 0.0 594
MS.gene031165.t1 AT1G22340 55.672 476 208 3 7 480 10 484 0.0 579
MS.gene031165.t1 AT1G22360 56.224 482 197 3 1 481 1 469 0.0 575
MS.gene031165.t1 AT1G22380 54.832 476 213 2 7 481 10 484 0.0 569
MS.gene031165.t1 AT1G22400 53.862 479 218 3 6 482 9 486 0.0 563
MS.gene031165.t1 AT1G22370 56.067 478 203 3 5 481 8 479 0.0 560
MS.gene031165.t1 AT1G78270 52.818 479 222 4 2 478 5 481 0.0 534
MS.gene031165.t1 AT1G22370 55.446 303 134 1 180 481 7 309 2.29e-118 350
MS.gene031165.t1 AT5G59590 33.543 477 271 12 7 474 7 446 3.24e-84 267
MS.gene031165.t1 AT5G59580 34.172 477 265 15 8 474 7 444 4.92e-83 264
MS.gene031165.t1 AT3G46670 33.333 474 270 13 10 474 9 445 2.90e-81 259
MS.gene031165.t1 AT5G38010 32.520 492 274 15 1 475 1 451 1.99e-78 252
MS.gene031165.t1 AT3G46660 33.827 473 267 16 12 474 16 452 3.97e-78 251
MS.gene031165.t1 AT3G11340 30.947 475 288 12 8 478 7 445 4.90e-76 246
MS.gene031165.t1 AT2G36970 31.062 499 293 15 1 477 1 470 8.08e-76 246
MS.gene031165.t1 AT3G55700 33.124 477 274 16 12 478 10 451 9.08e-75 243
MS.gene031165.t1 AT3G21560 31.452 496 285 15 9 480 11 475 4.23e-74 242
MS.gene031165.t1 AT5G05900 31.646 474 278 12 10 474 8 444 3.95e-73 238
MS.gene031165.t1 AT3G46680 31.315 479 278 13 8 474 7 446 6.83e-73 238
MS.gene031165.t1 AT3G46690 32.489 474 283 14 7 475 6 447 1.01e-72 237
MS.gene031165.t1 AT5G38040 31.478 467 274 13 18 475 18 447 3.62e-72 236
MS.gene031165.t1 AT3G46650 30.638 470 264 12 8 469 8 423 1.34e-71 234
MS.gene031165.t1 AT2G28080 32.568 479 285 13 14 480 22 474 1.34e-71 235
MS.gene031165.t1 AT4G15490 30.847 496 294 15 6 481 4 470 1.11e-70 233
MS.gene031165.t1 AT5G05860 31.303 476 286 12 10 479 9 449 1.12e-70 232
MS.gene031165.t1 AT5G05870 31.237 477 289 10 10 477 8 454 3.15e-70 231
MS.gene031165.t1 AT3G46720 32.218 478 266 15 8 474 7 437 7.04e-70 229
MS.gene031165.t1 AT4G15500 31.697 489 282 15 9 478 8 463 2.81e-69 229
MS.gene031165.t1 AT3G46700 31.276 486 270 19 8 477 7 444 1.06e-68 226
MS.gene031165.t1 AT5G05880 30.021 473 288 13 10 474 8 445 1.85e-66 221
MS.gene031165.t1 AT5G05890 31.158 475 284 13 10 474 8 449 6.33e-66 219
MS.gene031165.t1 AT3G02100 30.612 490 290 17 1 474 1 456 8.16e-66 219
MS.gene031165.t1 AT4G15480 30.722 485 294 14 10 477 19 478 1.54e-65 219
MS.gene031165.t1 AT1G05680 30.316 475 294 12 10 478 6 449 4.07e-65 217
MS.gene031165.t1 AT1G05675 30.189 477 288 12 10 474 6 449 1.04e-64 216
MS.gene031165.t1 AT3G55710 32.848 481 274 19 12 478 10 455 2.18e-64 216
MS.gene031165.t1 AT2G31750 29.436 479 301 13 8 478 6 455 8.01e-64 214
MS.gene031165.t1 AT2G31750 29.436 479 301 13 8 478 6 455 1.63e-63 214
MS.gene031165.t1 AT2G26480 29.012 486 291 15 7 480 5 448 3.42e-63 212
MS.gene031165.t1 AT2G43840 29.314 481 296 13 8 480 5 449 9.29e-63 211
MS.gene031165.t1 AT2G43840 29.106 481 297 13 8 480 5 449 8.36e-62 208
MS.gene031165.t1 AT2G23250 32.278 474 273 18 13 477 1 435 1.56e-60 205
MS.gene031165.t1 AT2G23260 31.493 489 291 18 1 479 1 455 6.49e-60 204
MS.gene031165.t1 AT2G43820 29.193 483 298 15 6 480 3 449 1.90e-59 202
MS.gene031165.t1 AT2G31790 29.897 485 287 14 7 474 5 453 6.64e-58 198
MS.gene031165.t1 AT4G01070 31.535 482 259 16 6 455 4 446 9.99e-58 198
MS.gene031165.t1 AT1G05560 27.664 488 294 16 9 477 4 451 2.13e-57 197
MS.gene031165.t1 AT1G05560 27.664 488 294 16 9 477 54 501 6.09e-57 197
MS.gene031165.t1 AT2G36790 32.213 506 276 19 10 478 13 488 4.30e-56 194
MS.gene031165.t1 AT2G36800 30.040 506 288 18 10 478 12 488 7.45e-55 191
MS.gene031165.t1 AT1G05530 28.367 490 295 18 8 478 3 455 1.14e-54 189
MS.gene031165.t1 AT2G15480 28.685 502 311 13 1 477 1 480 8.00e-54 188
MS.gene031165.t1 AT2G15490 29.209 493 302 13 10 477 7 477 8.51e-54 188
MS.gene031165.t1 AT2G15480 28.906 512 307 14 1 477 1 490 2.36e-53 187
MS.gene031165.t1 AT2G15490 29.032 496 302 13 10 477 7 480 3.33e-53 186
MS.gene031165.t1 AT4G34131 27.016 496 324 11 1 476 1 478 4.15e-53 186
MS.gene031165.t1 AT4G15550 29.472 492 292 17 9 476 12 472 6.28e-53 186
MS.gene031165.t1 AT2G36770 27.811 507 297 20 10 478 14 489 6.88e-52 183
MS.gene031165.t1 AT4G14090 28.601 486 298 18 3 476 6 454 2.70e-51 181
MS.gene031165.t1 AT2G30140 28.986 483 292 16 6 477 9 451 3.29e-51 180
MS.gene031165.t1 AT2G30140 28.986 483 291 16 6 477 9 450 3.96e-51 180
MS.gene031165.t1 AT2G36780 28.169 497 308 16 10 478 14 489 7.11e-51 181
MS.gene031165.t1 AT5G17050 27.409 467 305 12 6 466 8 446 7.84e-51 179
MS.gene031165.t1 AT3G53150 27.546 432 279 10 7 423 19 431 9.52e-51 181
MS.gene031165.t1 AT1G01420 30.938 501 275 17 9 480 7 465 2.29e-50 179
MS.gene031165.t1 AT5G26310 27.129 505 289 15 8 476 5 466 2.31e-50 179
MS.gene031165.t1 AT1G01420 30.938 501 275 17 9 480 10 468 3.05e-50 178
MS.gene031165.t1 AT1G24100 29.253 482 297 15 8 477 9 458 1.24e-49 176
MS.gene031165.t1 AT3G53160 29.412 493 307 15 10 478 8 483 1.68e-49 177
MS.gene031165.t1 AT2G16890 29.586 507 270 21 10 477 9 467 1.85e-49 176
MS.gene031165.t1 AT5G66690 27.006 511 282 18 8 476 5 466 4.11e-49 175
MS.gene031165.t1 AT2G36760 27.961 515 286 20 10 478 14 489 4.73e-49 176
MS.gene031165.t1 AT1G10400 29.072 485 300 15 8 476 5 461 6.43e-49 174
MS.gene031165.t1 AT3G50740 26.482 506 297 16 8 476 5 472 1.26e-48 174
MS.gene031165.t1 AT1G30530 27.521 476 308 14 7 478 9 451 1.62e-48 173
MS.gene031165.t1 AT2G36750 27.579 504 301 22 10 478 10 484 2.87e-48 173
MS.gene031165.t1 AT5G14860 29.563 504 283 20 10 477 8 475 9.17e-48 172
MS.gene031165.t1 AT2G30150 27.975 479 295 15 10 477 13 452 2.15e-47 170
MS.gene031165.t1 AT5G17030 26.042 480 317 12 6 478 8 456 4.02e-47 169
MS.gene031165.t1 AT1G01390 30.800 500 278 17 9 480 24 483 1.59e-46 169
MS.gene031165.t1 AT1G01390 30.800 500 278 17 9 480 7 466 2.28e-46 168
MS.gene031165.t1 AT5G17040 26.526 475 304 12 10 478 5 440 4.87e-46 166
MS.gene031165.t1 AT2G30150 27.789 475 293 15 14 477 1 436 9.89e-46 165
MS.gene031165.t1 AT5G03490 28.719 484 295 17 6 476 15 461 2.08e-44 162
MS.gene031165.t1 AT5G37950 30.504 377 221 14 25 394 1 343 4.81e-44 159
MS.gene031165.t1 AT5G17040 28.852 305 203 4 175 478 47 338 5.50e-44 158
MS.gene031165.t1 AT3G16520 29.630 351 211 12 118 456 113 439 2.25e-43 159
MS.gene031165.t1 AT3G16520 29.630 351 211 12 118 456 113 439 2.81e-43 159
MS.gene031165.t1 AT3G16520 29.630 351 211 12 118 456 113 439 3.80e-43 159
MS.gene031165.t1 AT4G34138 26.758 512 295 18 8 479 9 480 4.13e-43 159
MS.gene031165.t1 AT3G22250 27.368 475 275 15 7 449 5 441 5.54e-43 158
MS.gene031165.t1 AT4G36770 27.708 480 276 15 10 457 4 444 7.59e-43 158
MS.gene031165.t1 AT4G34135 27.766 461 281 13 6 438 7 443 3.83e-42 156
MS.gene031165.t1 AT1G73880 30.478 502 285 22 3 478 4 467 1.40e-41 155
MS.gene031165.t1 AT5G37950 30.585 376 216 14 25 394 1 337 1.48e-41 152
MS.gene031165.t1 AT5G65550 27.991 468 294 14 8 460 7 446 1.87e-41 154
MS.gene031165.t1 AT1G51210 28.289 456 274 17 8 451 18 432 1.92e-39 148
MS.gene031165.t1 AT2G29710 26.761 497 304 20 7 478 2 463 6.53e-39 147
MS.gene031165.t1 AT3G21790 26.627 507 297 13 12 477 6 478 6.98e-38 145
MS.gene031165.t1 AT3G21780 30.052 386 229 11 114 477 102 468 3.32e-37 142
MS.gene031165.t1 AT5G49690 25.877 456 291 16 10 452 10 431 1.02e-36 141
MS.gene031165.t1 AT3G21800 26.157 497 308 14 12 477 7 475 1.66e-36 140
MS.gene031165.t1 AT2G16890 27.802 464 248 21 10 434 9 424 2.37e-36 139
MS.gene031165.t1 AT3G21760 26.172 512 295 14 12 477 6 480 2.70e-36 140
MS.gene031165.t1 AT2G18560 30.968 310 169 11 187 470 79 369 6.08e-36 137
MS.gene031165.t1 AT1G07250 30.239 377 223 13 118 478 121 473 1.12e-35 138
MS.gene031165.t1 AT2G29740 27.163 497 305 17 6 474 4 471 1.53e-35 138
MS.gene031165.t1 AT1G07260 28.462 390 238 13 105 478 108 472 1.92e-35 138
MS.gene031165.t1 AT4G15280 27.833 503 301 16 8 478 2 474 2.60e-34 134
MS.gene031165.t1 AT4G15280 27.833 503 301 16 8 478 34 506 3.94e-34 134
MS.gene031165.t1 AT2G29730 25.099 506 301 18 7 478 2 463 6.68e-34 133
MS.gene031165.t1 AT2G18570 24.444 495 304 18 8 470 3 459 2.41e-33 132
MS.gene031165.t1 AT4G15260 31.142 289 165 8 212 478 79 355 3.50e-32 126
MS.gene031165.t1 AT2G29750 25.703 498 306 17 12 478 10 474 6.89e-32 128
MS.gene031165.t1 AT3G21750 26.614 511 292 17 8 478 2 469 1.71e-31 126
MS.gene031165.t1 AT5G12890 26.465 529 297 22 1 481 1 485 6.92e-30 122
MS.gene031165.t1 AT1G07240 29.181 281 170 8 215 478 208 476 2.42e-29 120
MS.gene031165.t1 AT2G22590 27.778 468 281 19 8 452 13 446 5.38e-29 119
MS.gene031165.t1 AT4G01070 29.619 341 186 13 6 331 4 305 3.55e-25 106
MS.gene031165.t1 AT4G34135 27.697 343 208 10 6 331 7 326 3.29e-22 97.8
MS.gene031165.t1 AT1G64910 26.464 461 274 19 10 453 6 418 4.28e-21 96.3
MS.gene031165.t1 AT4G27570 24.043 470 299 19 8 463 5 430 2.44e-20 94.0
MS.gene031165.t1 AT1G06000 32.524 206 123 6 287 479 233 435 1.19e-19 91.7
MS.gene031165.t1 AT4G27560 23.830 470 300 19 8 463 5 430 8.06e-19 89.4
MS.gene031165.t1 AT2G22930 23.965 459 288 14 10 453 6 418 4.10e-17 84.0
MS.gene031165.t1 AT2G23210 26.174 298 189 11 1 296 1 269 8.08e-17 81.3
MS.gene031165.t1 AT3G29630 24.898 490 295 20 8 477 4 440 1.04e-16 82.8
MS.gene031165.t1 AT5G53990 29.379 177 113 5 287 453 244 418 1.05e-16 82.8
MS.gene031165.t1 AT5G54010 23.593 462 295 18 8 458 4 418 4.92e-16 80.9
MS.gene031165.t1 AT4G09500 29.944 177 112 5 287 453 244 418 6.84e-16 80.1
MS.gene031165.t1 AT4G09500 29.944 177 112 5 287 453 219 393 6.98e-16 80.1
MS.gene031165.t1 AT3G29630 30.049 203 124 6 286 477 219 414 1.14e-15 79.3
MS.gene031165.t1 AT1G50580 23.758 463 289 18 8 453 4 419 1.10e-14 76.6
MS.gene031165.t1 AT5G54060 24.480 433 263 16 1 409 1 393 4.16e-14 74.7
MS.gene031165.t1 AT1G64920 29.282 181 112 6 287 453 244 422 7.59e-13 70.9

Find 106 sgRNAs with CRISPR-Local

Find 179 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGATGAATTTGTGGATTT+TGG 0.148483 6.2:+9204427 None:intergenic
TAAGTTCACAATAGGGTTTA+AGG 0.228983 6.2:+9206048 None:intergenic
AAGACATTGTTGACTTTATC+AGG 0.230929 6.2:-9204626 MS.gene031165:CDS
GCAAAGCTTCTTCACCTTAG+AGG 0.280905 6.2:-9206257 MS.gene031165:CDS
CCTAGTAATAAGTTCACAAT+AGG 0.312390 6.2:+9206040 None:intergenic
GAACTTGGACAAAGTGATTA+AGG 0.324980 6.2:-9203809 MS.gene031165:CDS
AGCTTTGCTAGTTTGAATAA+TGG 0.325197 6.2:+9206272 None:intergenic
ACAAAAGTAGATTGGATTCC+AGG 0.332750 6.2:-9204669 MS.gene031165:CDS
ATATGGCCTTGAACTGGATA+TGG 0.341554 6.2:+9206299 None:intergenic
AAATTCAACATAATATCATT+TGG 0.341744 6.2:+9204594 None:intergenic
AAAATCAGTCAAACCGTCTA+AGG 0.352517 6.2:+9206166 None:intergenic
GTGGACACCAACTTGCTATT+AGG 0.356812 6.2:+9204151 None:intergenic
ATTTGTAATGAATGGGAGAT+TGG 0.359619 6.2:-9203988 MS.gene031165:CDS
CCTATTGTGAACTTATTACT+AGG 0.362659 6.2:-9206040 MS.gene031165:CDS
TTATCTTACAAATGGATGTT+TGG 0.366166 6.2:-9204694 MS.gene031165:CDS
CCTAGTGGTGTTAGACCATC+TGG 0.366909 6.2:+9206128 None:intergenic
GTTTGAATAATGGATTGATA+TGG 0.370528 6.2:+9206282 None:intergenic
GTTTGGAAACAAAAGTAGAT+TGG 0.372644 6.2:-9204677 MS.gene031165:CDS
GCAAATGTTGGAATTTGCTT+GGG 0.375617 6.2:-9204283 MS.gene031165:CDS
TCCGTTGTTTATGTTAATTT+CGG 0.379062 6.2:-9204330 MS.gene031165:CDS
GTAGATTTATTTGTAATGAA+TGG 0.382641 6.2:-9203996 MS.gene031165:CDS
AGGTTATGTGAAAGCCTCTA+AGG 0.390826 6.2:+9206243 None:intergenic
AAATCCACAAATTCATCAAT+TGG 0.393774 6.2:-9204424 MS.gene031165:CDS
ACTCTTTAGATTCCAACCTT+TGG 0.394855 6.2:-9204401 MS.gene031165:CDS
GGTGTTGCTTAAACAAAATT+AGG 0.402028 6.2:-9203785 None:intergenic
TCAGAAACTAAGCAAGTAAC+TGG 0.402772 6.2:+9205993 None:intergenic
GTTGGAATTTGCTTGGGGTT+TGG 0.405650 6.2:-9204277 MS.gene031165:CDS
TAGATTTATTTGTAATGAAT+GGG 0.407079 6.2:-9203995 MS.gene031165:CDS
GAGTCCAATTGATGAATTTG+TGG 0.412904 6.2:+9204420 None:intergenic
AGTATCTTCTTTCCAAAGGT+TGG 0.414296 6.2:+9204389 None:intergenic
AGCAAATGTTGGAATTTGCT+TGG 0.422319 6.2:-9204284 MS.gene031165:CDS
GGTTTAATAATGAAGGTAAA+GGG 0.432184 6.2:+9204448 None:intergenic
CTAGTAATAAGTTCACAATA+GGG 0.446275 6.2:+9206041 None:intergenic
ATTAGGCCGGACCTTGTCAT+TGG 0.452933 6.2:-9204225 MS.gene031165:CDS
AGCAAATTCCAACATTTGCT+CGG 0.454558 6.2:+9204287 None:intergenic
GATGAGAGTTATCTTACAAA+TGG 0.462382 6.2:-9204702 MS.gene031165:CDS
TGGTTTAATAATGAAGGTAA+AGG 0.468725 6.2:+9204447 None:intergenic
GAATTGATGGTGGGAGAGAA+AGG 0.475632 6.2:-9203913 MS.gene031165:CDS
GGATTGATATGGCCTTGAAC+TGG 0.479128 6.2:+9206293 None:intergenic
AAGATACTGAGTGTCTTGAT+TGG 0.480832 6.2:-9204374 MS.gene031165:CDS
CAAATAAATCTACAGTCTGT+TGG 0.481604 6.2:+9204006 None:intergenic
ATGATTCCATATCCAGTTCA+AGG 0.483373 6.2:-9206305 MS.gene031165:CDS
AGGCCGGACCTTGTCATTGG+TGG 0.483422 6.2:-9204222 MS.gene031165:CDS
ACGAATGAAATTGCAGATAG+AGG 0.484929 6.2:-9204174 MS.gene031165:CDS
AACAACGGATCCCGGCTCCT+TGG 0.486045 6.2:+9204344 None:intergenic
GTCAAACCGTCTAAGGCATT+CGG 0.488489 6.2:+9206173 None:intergenic
CAAGCTGATCAATGAATTGA+TGG 0.489788 6.2:-9203926 MS.gene031165:CDS
GTGCAAATTCTTCAGCAGCT+TGG 0.489819 6.2:+9205949 None:intergenic
TCTTGATTGGCTTGAATCCA+AGG 0.492781 6.2:-9204361 MS.gene031165:CDS
CATCAATTCATTGATCAGCT+TGG 0.495941 6.2:+9203927 None:intergenic
TGGTTCAACACTTTCTCTTG+TGG 0.496098 6.2:+9204132 None:intergenic
GAGCCACCAATGACAAGGTC+CGG 0.497625 6.2:+9204219 None:intergenic
GTAAACTTAGTACCTTTGAA+TGG 0.497967 6.2:+9205840 None:intergenic
TCCAGCGCATATGCTTTCAA+TGG 0.498870 6.2:+9204065 None:intergenic
GTCAAGAATCCGCCGATTGA+AGG 0.503038 6.2:+9204108 None:intergenic
TTGGCTTGAATCCAAGGAGC+CGG 0.504128 6.2:-9204355 MS.gene031165:CDS
GCAAATTCCAACATTTGCTC+GGG 0.504999 6.2:+9204288 None:intergenic
CTTACTGATTGACAAAGAGT+TGG 0.519557 6.2:+9206080 None:intergenic
GCAAGTAACTGGTGGGACAT+TGG 0.523788 6.2:+9206004 None:intergenic
TAATGAATGGGAGATTGGTA+TGG 0.527344 6.2:-9203983 MS.gene031165:CDS
AATGAAGGTAAAGGGCCGAT+AGG 0.530778 6.2:+9204456 None:intergenic
GAATGTGAAGAGAGGGGAGT+TGG 0.531204 6.2:-9203950 MS.gene031165:CDS
GTGTTGAACCACCCTTCAAT+CGG 0.531273 6.2:-9204120 MS.gene031165:CDS
TTGATACGAATGTGAAGAGA+GGG 0.537755 6.2:-9203957 MS.gene031165:CDS
GATTCTTGACTCATTGTGGA+TGG 0.539523 6.2:-9204095 MS.gene031165:CDS
ATGAAGGTAAAGGGCCGATA+GGG 0.540303 6.2:+9204457 None:intergenic
ACCATTGAAAGCATATGCGC+TGG 0.543602 6.2:-9204066 MS.gene031165:CDS
TCAAGAATCCGCCGATTGAA+GGG 0.546732 6.2:+9204109 None:intergenic
TATGACACCCGAGCAAATGT+TGG 0.552021 6.2:-9204295 MS.gene031165:CDS
TGGCTTGAATCCAAGGAGCC+GGG 0.553822 6.2:-9204354 MS.gene031165:CDS
TGCAATGGAGTTGAAGAAGA+AGG 0.554838 6.2:-9203872 MS.gene031165:CDS
TTAACATAAACAACGGATCC+CGG 0.555991 6.2:+9204336 None:intergenic
GACGTTGAGGCAAAATGCAA+TGG 0.557209 6.2:-9203887 MS.gene031165:CDS
CTGGAGTGCCGATGTTGTGT+TGG 0.557220 6.2:-9204047 MS.gene031165:CDS
GGCGGATTCTTGACTCATTG+TGG 0.560659 6.2:-9204099 MS.gene031165:CDS
ACTCAGTATCTTCTTTCCAA+AGG 0.563526 6.2:+9204385 None:intergenic
TGGTTGTTCATACATGAACT+TGG 0.565181 6.2:-9203824 MS.gene031165:CDS
AGCTTTGAAACCATCCCAGA+TGG 0.571170 6.2:-9206143 MS.gene031165:CDS
CAAATGTTGGAATTTGCTTG+GGG 0.573887 6.2:-9204282 MS.gene031165:CDS
TGGTGTTAGACCATCTGGGA+TGG 0.585226 6.2:+9206133 None:intergenic
CCAGATGGTCTAACACCACT+AGG 0.586590 6.2:-9206128 MS.gene031165:CDS
ATTGATACGAATGTGAAGAG+AGG 0.589229 6.2:-9203958 MS.gene031165:CDS
AGAGGTCCGAATGCCTTAGA+CGG 0.593754 6.2:-9206179 MS.gene031165:CDS
ATTGTATTCAGTGTTAACAA+AGG 0.597303 6.2:+9206223 None:intergenic
AAACTAAGCAAGTAACTGGT+GGG 0.599605 6.2:+9205997 None:intergenic
CAAGAGAACACTAGACCACC+AGG 0.600163 6.2:-9203847 MS.gene031165:CDS
AGAGGTATCATACCATTCAA+AGG 0.605847 6.2:-9205852 MS.gene031165:intron
AAACGCTTGCTCAAATCAAG+AGG 0.611360 6.2:-9206197 MS.gene031165:CDS
TTGAACCACCCTTCAATCGG+CGG 0.615937 6.2:-9204117 MS.gene031165:CDS
GCCGAAATTAACATAAACAA+CGG 0.626922 6.2:+9204329 None:intergenic
GAAACTAAGCAAGTAACTGG+TGG 0.629351 6.2:+9205996 None:intergenic
TGATACGAATGTGAAGAGAG+GGG 0.638426 6.2:-9203956 MS.gene031165:CDS
CTAGTGGTGTTAGACCATCT+GGG 0.639019 6.2:+9206129 None:intergenic
CTGATCAATGAATTGATGGT+GGG 0.642727 6.2:-9203922 MS.gene031165:CDS
TCACTGAGCCACCAATGACA+AGG 0.642748 6.2:+9204214 None:intergenic
ATAGAGGCCTAATAGCAAGT+TGG 0.652566 6.2:-9204158 MS.gene031165:CDS
GCTGATCAATGAATTGATGG+TGG 0.656580 6.2:-9203923 MS.gene031165:CDS
GGTCTAACACCACTAGGTGA+TGG 0.656884 6.2:-9206122 MS.gene031165:CDS
TATGGAATCATCACAGCATG+TGG 0.657258 6.2:+9206317 None:intergenic
TTCATGTATGAACAACCACC+TGG 0.658534 6.2:+9203829 None:intergenic
AGAATCCGCCGATTGAAGGG+TGG 0.673563 6.2:+9204112 None:intergenic
CTAACATCACCATCACCTAG+TGG 0.680677 6.2:+9206113 None:intergenic
GAGAGAAAGGAAAGACGTTG+AGG 0.691399 6.2:-9203900 MS.gene031165:CDS
CTTGGACAAAGTGATTAAGG+AGG 0.711231 6.2:-9203806 MS.gene031165:CDS
ATGTATGAACAACCACCTGG+TGG 0.732257 6.2:+9203832 None:intergenic
GAGAACACTAGACCACCAGG+TGG 0.806482 6.2:-9203844 MS.gene031165:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATATTATAATATTAAA+AGG + chr6.2:9204468-9204487 None:intergenic 0.0%
!! AAAATATTATAATATTAAAA+GGG + chr6.2:9204467-9204486 None:intergenic 0.0%
!! ATATATATATATATATATAT+AGG - chr6.2:9204580-9204599 MS.gene031165:CDS 0.0%
!! TATATATATATATATATATA+GGG - chr6.2:9204579-9204598 MS.gene031165:CDS 0.0%
!! TAATTAGAATATAAACAAAA+GGG + chr6.2:9204748-9204767 None:intergenic 10.0%
!! TATATATATATATATATAGG+GGG - chr6.2:9204647-9204666 MS.gene031165:CDS 10.0%
!! TTAATTAGAATATAAACAAA+AGG + chr6.2:9204749-9204768 None:intergenic 10.0%
!!! CATTTTTATAAGTATTATTA+AGG + chr6.2:9204945-9204964 None:intergenic 10.0%
!!! TATTTTTTAAAATTTAGGAA+GGG - chr6.2:9205171-9205190 MS.gene031165:intron 10.0%
!!! TTATTTTTTAAAATTTAGGA+AGG - chr6.2:9205170-9205189 MS.gene031165:intron 10.0%
!! AAATTCAACATAATATCATT+TGG + chr6.2:9205536-9205555 None:intergenic 15.0%
!! TAGATTTATTTGTAATGAAT+GGG - chr6.2:9206132-9206151 MS.gene031165:CDS 15.0%
!!! AATGAAAGTTTTTAATTTGA+CGG + chr6.2:9205332-9205351 None:intergenic 15.0%
!!! ATTTTTTAAAATTTAGGAAG+GGG - chr6.2:9205172-9205191 MS.gene031165:intron 15.0%
!!! TGTTTTAGTAAATTATAAGT+GGG + chr6.2:9204725-9204744 None:intergenic 15.0%
!! ATGAAAAATAGAGAACATTT+GGG + chr6.2:9204205-9204224 None:intergenic 20.0%
!! GTAGATTTATTTGTAATGAA+TGG - chr6.2:9206131-9206150 MS.gene031165:CDS 20.0%
!!! ACTTTTAAGGAAACAATATT+TGG - chr6.2:9204875-9204894 MS.gene031165:intron 20.0%
!!! GTAATAAAGACAAACTTTTA+AGG - chr6.2:9204862-9204881 MS.gene031165:intron 20.0%
!!! GTGTTTTAGTAAATTATAAG+TGG + chr6.2:9204726-9204745 None:intergenic 20.0%
! AAAAGAGAATGACATGTTTA+AGG - chr6.2:9204829-9204848 MS.gene031165:intron 25.0%
! AAATCCACAAATTCATCAAT+TGG - chr6.2:9205703-9205722 MS.gene031165:intron 25.0%
! AATATGTCAATACTTACTCT+TGG + chr6.2:9205139-9205158 None:intergenic 25.0%
! AATGAGTGTAAATAATCAAG+TGG - chr6.2:9204961-9204980 MS.gene031165:intron 25.0%
! ATGAGTGTAAATAATCAAGT+GGG - chr6.2:9204962-9204981 MS.gene031165:intron 25.0%
! ATTGTATTCAGTGTTAACAA+AGG + chr6.2:9203907-9203926 None:intergenic 25.0%
! CTAGTAATAAGTTCACAATA+GGG + chr6.2:9204089-9204108 None:intergenic 25.0%
! GATGAAAAATAGAGAACATT+TGG + chr6.2:9204206-9204225 None:intergenic 25.0%
! GCATATAGTTGAAATACTTT+CGG + chr6.2:9205232-9205251 None:intergenic 25.0%
! GGTTTAATAATGAAGGTAAA+GGG + chr6.2:9205682-9205701 None:intergenic 25.0%
! GTAAAAAGAAGGAATTATAG+AGG + chr6.2:9205651-9205670 None:intergenic 25.0%
! TCCGTTGTTTATGTTAATTT+CGG - chr6.2:9205797-9205816 MS.gene031165:intron 25.0%
! TGGTTTAATAATGAAGGTAA+AGG + chr6.2:9205683-9205702 None:intergenic 25.0%
! TTATCTTACAAATGGATGTT+TGG - chr6.2:9205433-9205452 MS.gene031165:intron 25.0%
! TTCATACACACACATATATA+AGG + chr6.2:9205367-9205386 None:intergenic 25.0%
!! AATATTTGGAATGATGAAAG+TGG - chr6.2:9204889-9204908 MS.gene031165:intron 25.0%
!! ACAATTTTATTGTTTCATCC+AGG + chr6.2:9204443-9204462 None:intergenic 25.0%
!! ACTTGCACCTTAATAATTTT+AGG - chr6.2:9204997-9205016 MS.gene031165:intron 25.0%
!! ATATTTGGAATGATGAAAGT+GGG - chr6.2:9204890-9204909 MS.gene031165:intron 25.0%
!! ATTGATGAATTTGTGGATTT+TGG + chr6.2:9205703-9205722 None:intergenic 25.0%
!! GATTTTTACACACATACTTT+CGG + chr6.2:9205108-9205127 None:intergenic 25.0%
!!! GGATTTTGGTTTAATAATGA+AGG + chr6.2:9205689-9205708 None:intergenic 25.0%
!!! GTTTGAATAATGGATTGATA+TGG + chr6.2:9203848-9203867 None:intergenic 25.0%
AACGAAAGTTAATTGCTTGA+AGG + chr6.2:9205390-9205409 None:intergenic 30.0%
AACTGTCAATACTTACTCTT+GGG + chr6.2:9205081-9205100 None:intergenic 30.0%
ACACCCACCTAAAATTATTA+AGG + chr6.2:9205007-9205026 None:intergenic 30.0%
ATTTGTAATGAATGGGAGAT+TGG - chr6.2:9206139-9206158 MS.gene031165:CDS 30.0%
CAAAAATGGTTTCTTGCAAT+TGG + chr6.2:9205876-9205895 None:intergenic 30.0%
CAAATAAATCTACAGTCTGT+TGG + chr6.2:9206124-9206143 None:intergenic 30.0%
CCTAGTAATAAGTTCACAAT+AGG + chr6.2:9204090-9204109 None:intergenic 30.0%
CCTATTGTGAACTTATTACT+AGG - chr6.2:9204087-9204106 MS.gene031165:CDS 30.0%
GACACCAAAAATCTTAAAAC+CGG + chr6.2:9204421-9204440 None:intergenic 30.0%
GATGAGAGTTATCTTACAAA+TGG - chr6.2:9205425-9205444 MS.gene031165:intron 30.0%
GCCGAAATTAACATAAACAA+CGG + chr6.2:9205801-9205820 None:intergenic 30.0%
GTAAACTTAGTACCTTTGAA+TGG + chr6.2:9204290-9204309 None:intergenic 30.0%
GTTTGGAAACAAAAGTAGAT+TGG - chr6.2:9205450-9205469 MS.gene031165:intron 30.0%
TAAGTTCACAATAGGGTTTA+AGG + chr6.2:9204082-9204101 None:intergenic 30.0%
TTCCAGGTTTGAAAAACTTT+CGG - chr6.2:9205474-9205493 MS.gene031165:intron 30.0%
! AGCTTTGCTAGTTTGAATAA+TGG + chr6.2:9203858-9203877 None:intergenic 30.0%
! ATTCCTTCTTTTTACCCTAT+CGG - chr6.2:9205656-9205675 MS.gene031165:intron 30.0%
! TGCACCTTAATAATTTTAGG+TGG - chr6.2:9205000-9205019 MS.gene031165:intron 30.0%
! TTTCGATCTTTTGTAGAAAG+AGG - chr6.2:9204257-9204276 MS.gene031165:CDS 30.0%
!! AACCATTTTTGTGGATCATT+AGG - chr6.2:9205885-9205904 MS.gene031165:CDS 30.0%
!! AAGACATTGTTGACTTTATC+AGG - chr6.2:9205501-9205520 MS.gene031165:intron 30.0%
!! ATTGCAAGAAACCATTTTTG+TGG - chr6.2:9205876-9205895 MS.gene031165:CDS 30.0%
!! GCACCTTAATAATTTTAGGT+GGG - chr6.2:9205001-9205020 MS.gene031165:intron 30.0%
!!! TTTTAAGATTTTTGGTGTCC+TGG - chr6.2:9204422-9204441 MS.gene031165:CDS 30.0%
AAAAATGGCCAACACAACAT+CGG + chr6.2:9206091-9206110 None:intergenic 35.0%
AAAATCAGTCAAACCGTCTA+AGG + chr6.2:9203964-9203983 None:intergenic 35.0%
AAACTAAGCAAGTAACTGGT+GGG + chr6.2:9204133-9204152 None:intergenic 35.0%
AAGATACTGAGTGTCTTGAT+TGG - chr6.2:9205753-9205772 MS.gene031165:intron 35.0%
ACAAAAGTAGATTGGATTCC+AGG - chr6.2:9205458-9205477 MS.gene031165:intron 35.0%
ACGAATGAAATTGCAGATAG+AGG - chr6.2:9205953-9205972 MS.gene031165:CDS 35.0%
ACTCAGTATCTTCTTTCCAA+AGG + chr6.2:9205745-9205764 None:intergenic 35.0%
ACTCTTTAGATTCCAACCTT+TGG - chr6.2:9205726-9205745 MS.gene031165:intron 35.0%
ACTGTCAATACTTACTCTTG+GGG + chr6.2:9205080-9205099 None:intergenic 35.0%
AGCAAATTCCAACATTTGCT+CGG + chr6.2:9205843-9205862 None:intergenic 35.0%
AGTATCTTCTTTCCAAAGGT+TGG + chr6.2:9205741-9205760 None:intergenic 35.0%
ATGATTCCATATCCAGTTCA+AGG - chr6.2:9203822-9203841 MS.gene031165:CDS 35.0%
ATTGATACGAATGTGAAGAG+AGG - chr6.2:9206169-9206188 MS.gene031165:CDS 35.0%
CAACTGTCAATACTTACTCT+TGG + chr6.2:9205082-9205101 None:intergenic 35.0%
CAAGCTGATCAATGAATTGA+TGG - chr6.2:9206201-9206220 MS.gene031165:CDS 35.0%
CATATATATATCCACTGAGC+CGG - chr6.2:9204399-9204418 MS.gene031165:CDS 35.0%
CATCAATTCATTGATCAGCT+TGG + chr6.2:9206203-9206222 None:intergenic 35.0%
GAACTTGGACAAAGTGATTA+AGG - chr6.2:9206318-9206337 MS.gene031165:CDS 35.0%
GAGTCCAATTGATGAATTTG+TGG + chr6.2:9205710-9205729 None:intergenic 35.0%
GTAAATAATCAAGTGGGTGT+AGG - chr6.2:9204968-9204987 MS.gene031165:intron 35.0%
TAATGAATGGGAGATTGGTA+TGG - chr6.2:9206144-9206163 MS.gene031165:CDS 35.0%
TCAGAAACTAAGCAAGTAAC+TGG + chr6.2:9204137-9204156 None:intergenic 35.0%
TGGTTGTTCATACATGAACT+TGG - chr6.2:9206303-9206322 MS.gene031165:CDS 35.0%
TTAACATAAACAACGGATCC+CGG + chr6.2:9205794-9205813 None:intergenic 35.0%
TTGATACGAATGTGAAGAGA+GGG - chr6.2:9206170-9206189 MS.gene031165:CDS 35.0%
! ACTTGCACCTTAGTGTTTTT+AGG - chr6.2:9205036-9205055 MS.gene031165:intron 35.0%
! ACTTGCACCTTAGTGTTTTT+AGG + chr6.2:9205055-9205036 None:intergenic 35.0%
! AGCAAATGTTGGAATTTGCT+TGG - chr6.2:9205843-9205862 MS.gene031165:intron 35.0%
! ATTTTTGTGGATCATTAGGC+CGG - chr6.2:9205889-9205908 MS.gene031165:CDS 35.0%
! CAAATGTTGGAATTTGCTTG+GGG - chr6.2:9205845-9205864 MS.gene031165:intron 35.0%
! CTGATCAATGAATTGATGGT+GGG - chr6.2:9206205-9206224 MS.gene031165:CDS 35.0%
! CTTACTGATTGACAAAGAGT+TGG + chr6.2:9204050-9204069 None:intergenic 35.0%
! GCAAATGTTGGAATTTGCTT+GGG - chr6.2:9205844-9205863 MS.gene031165:intron 35.0%
!! AACCGAAAGTTTTTCAAACC+TGG + chr6.2:9205479-9205498 None:intergenic 35.0%
!! AGAGGTATCATACCATTCAA+AGG - chr6.2:9204275-9204294 MS.gene031165:CDS 35.0%
!! ATATGCACTTTGAGACTACA+AGG - chr6.2:9205246-9205265 MS.gene031165:intron 35.0%
!!! TGAGCCGGTTTTAAGATTTT+TGG - chr6.2:9204414-9204433 MS.gene031165:CDS 35.0%
AAACGCTTGCTCAAATCAAG+AGG - chr6.2:9203930-9203949 MS.gene031165:CDS 40.0%
ACACCCACCTAAAAACACTA+AGG - chr6.2:9204680-9204699 MS.gene031165:CDS 40.0%
ACACCCACCTAAAAACACTA+AGG + chr6.2:9204699-9204680 None:intergenic 40.0%
AGGTTATGTGAAAGCCTCTA+AGG + chr6.2:9203887-9203906 None:intergenic 40.0%
ATAGAGGCCTAATAGCAAGT+TGG - chr6.2:9205969-9205988 MS.gene031165:CDS 40.0%
CTACAAGGTCAAACTCTTAC+TGG - chr6.2:9205261-9205280 MS.gene031165:intron 40.0%
CTGTCAATACTTACTCTTGG+GGG + chr6.2:9205079-9205098 None:intergenic 40.0%
CTTGGACAAAGTGATTAAGG+AGG - chr6.2:9206321-9206340 MS.gene031165:CDS 40.0%
GAAACTAAGCAAGTAACTGG+TGG + chr6.2:9204134-9204153 None:intergenic 40.0%
GATTCTTGACTCATTGTGGA+TGG - chr6.2:9206032-9206051 MS.gene031165:CDS 40.0%
GCAAATTCCAACATTTGCTC+GGG + chr6.2:9205842-9205861 None:intergenic 40.0%
GCTGATCAATGAATTGATGG+TGG - chr6.2:9206204-9206223 MS.gene031165:CDS 40.0%
GGCCTAATGATCCACAAAAA+TGG + chr6.2:9205890-9205909 None:intergenic 40.0%
GTTGGCTGATCAGCAAAAAA+TGG + chr6.2:9206106-9206125 None:intergenic 40.0%
TATGGAATCATCACAGCATG+TGG + chr6.2:9203813-9203832 None:intergenic 40.0%
TGATACGAATGTGAAGAGAG+GGG - chr6.2:9206171-9206190 MS.gene031165:CDS 40.0%
TGCAATGGAGTTGAAGAAGA+AGG - chr6.2:9206255-9206274 MS.gene031165:CDS 40.0%
TGGTTCAACACTTTCTCTTG+TGG + chr6.2:9205998-9206017 None:intergenic 40.0%
TTCATGTATGAACAACCACC+TGG + chr6.2:9206301-9206320 None:intergenic 40.0%
! AAATCTTAAAACCGGCTCAG+TGG + chr6.2:9204413-9204432 None:intergenic 40.0%
! ATATGGCCTTGAACTGGATA+TGG + chr6.2:9203831-9203850 None:intergenic 40.0%
!! TCTTGATTGGCTTGAATCCA+AGG - chr6.2:9205766-9205785 MS.gene031165:intron 40.0%
!!! GCACCTTAGTGTTTTTAGGT+GGG - chr6.2:9205040-9205059 MS.gene031165:intron 40.0%
!!! GCACCTTAGTGTTTTTAGGT+GGG + chr6.2:9205059-9205040 None:intergenic 40.0%
!!! TGCACCTTAGTGTTTTTAGG+TGG - chr6.2:9205039-9205058 MS.gene031165:intron 40.0%
!!! TGCACCTTAGTGTTTTTAGG+TGG + chr6.2:9205058-9205039 None:intergenic 40.0%
AATGAAGGTAAAGGGCCGAT+AGG + chr6.2:9205674-9205693 None:intergenic 45.0%
ATGAAGGTAAAGGGCCGATA+GGG + chr6.2:9205673-9205692 None:intergenic 45.0%
ATGTATGAACAACCACCTGG+TGG + chr6.2:9206298-9206317 None:intergenic 45.0%
CTAACATCACCATCACCTAG+TGG + chr6.2:9204017-9204036 None:intergenic 45.0%
GACGTTGAGGCAAAATGCAA+TGG - chr6.2:9206240-9206259 MS.gene031165:CDS 45.0%
GAGAGAAAGGAAAGACGTTG+AGG - chr6.2:9206227-9206246 MS.gene031165:CDS 45.0%
GCAAAGCTTCTTCACCTTAG+AGG - chr6.2:9203870-9203889 MS.gene031165:CDS 45.0%
GTGCAAATTCTTCAGCAGCT+TGG + chr6.2:9204181-9204200 None:intergenic 45.0%
GTGTTGAACCACCCTTCAAT+CGG - chr6.2:9206007-9206026 MS.gene031165:CDS 45.0%
TATGACACCCGAGCAAATGT+TGG - chr6.2:9205832-9205851 MS.gene031165:intron 45.0%
TCCAGCGCATATGCTTTCAA+TGG + chr6.2:9206065-9206084 None:intergenic 45.0%
! ACCATTGAAAGCATATGCGC+TGG - chr6.2:9206061-9206080 MS.gene031165:CDS 45.0%
! CTAGTGGTGTTAGACCATCT+GGG + chr6.2:9204001-9204020 None:intergenic 45.0%
! GGATTGATATGGCCTTGAAC+TGG + chr6.2:9203837-9203856 None:intergenic 45.0%
! GTCAAACCGTCTAAGGCATT+CGG + chr6.2:9203957-9203976 None:intergenic 45.0%
! GTTGGAATTTGCTTGGGGTT+TGG - chr6.2:9205850-9205869 MS.gene031165:intron 45.0%
! TCAAGAATCCGCCGATTGAA+GGG + chr6.2:9206021-9206040 None:intergenic 45.0%
!! AGCTTTGAAACCATCCCAGA+TGG - chr6.2:9203984-9204003 MS.gene031165:CDS 45.0%
!! GAATTGATGGTGGGAGAGAA+AGG - chr6.2:9206214-9206233 MS.gene031165:CDS 45.0%
!! GTGGACACCAACTTGCTATT+AGG + chr6.2:9205979-9205998 None:intergenic 45.0%
!! ATATATATATATAATATAGA+GGG + chr6.2:9204572-9204591 None:intergenic 5.0%
!! ATATATATATATATATATAG+GGG - chr6.2:9204646-9204665 MS.gene031165:CDS 5.0%
!! TATATATATATATAATATAG+AGG + chr6.2:9204573-9204592 None:intergenic 5.0%
!!! CATTTTATTTTTTAAAATTT+AGG - chr6.2:9205166-9205185 MS.gene031165:intron 5.0%
!!! CTAAATTTTAAAAAATAAAA+TGG + chr6.2:9205168-9205187 None:intergenic 5.0%
!!! CTAATTAATTTTAAATAAAA+GGG - chr6.2:9204761-9204780 MS.gene031165:intron 5.0%
!!! TCTAATTAATTTTAAATAAA+AGG - chr6.2:9204760-9204779 MS.gene031165:intron 5.0%
AGAGGTCCGAATGCCTTAGA+CGG - chr6.2:9203948-9203967 MS.gene031165:CDS 50.0%
ATTAGGCCGGACCTTGTCAT+TGG - chr6.2:9205902-9205921 MS.gene031165:CDS 50.0%
CAAGAGAACACTAGACCACC+AGG - chr6.2:9206280-9206299 MS.gene031165:CDS 50.0%
CCAGATGGTCTAACACCACT+AGG - chr6.2:9203999-9204018 MS.gene031165:CDS 50.0%
GAATGTGAAGAGAGGGGAGT+TGG - chr6.2:9206177-9206196 MS.gene031165:CDS 50.0%
GCAAGTAACTGGTGGGACAT+TGG + chr6.2:9204126-9204145 None:intergenic 50.0%
GGGCCGATAGGGTAAAAAGA+AGG + chr6.2:9205662-9205681 None:intergenic 50.0%
GGTCTAACACCACTAGGTGA+TGG - chr6.2:9204005-9204024 MS.gene031165:CDS 50.0%
TCACTGAGCCACCAATGACA+AGG + chr6.2:9205916-9205935 None:intergenic 50.0%
TTGAACCACCCTTCAATCGG+CGG - chr6.2:9206010-9206029 MS.gene031165:CDS 50.0%
! CCTAGTGGTGTTAGACCATC+TGG + chr6.2:9204002-9204021 None:intergenic 50.0%
! GGCGGATTCTTGACTCATTG+TGG - chr6.2:9206028-9206047 MS.gene031165:CDS 50.0%
! GTCAAGAATCCGCCGATTGA+AGG + chr6.2:9206022-9206041 None:intergenic 50.0%
! TGGTGTTAGACCATCTGGGA+TGG + chr6.2:9203997-9204016 None:intergenic 50.0%
! TTGGCTTGAATCCAAGGAGC+CGG - chr6.2:9205772-9205791 MS.gene031165:intron 50.0%
GAGAACACTAGACCACCAGG+TGG - chr6.2:9206283-9206302 MS.gene031165:CDS 55.0%
GAGCCACCAATGACAAGGTC+CGG + chr6.2:9205911-9205930 None:intergenic 55.0%
TGGCTTGAATCCAAGGAGCC+GGG - chr6.2:9205773-9205792 MS.gene031165:intron 55.0%
! AGAATCCGCCGATTGAAGGG+TGG + chr6.2:9206018-9206037 None:intergenic 55.0%
!! CTGGAGTGCCGATGTTGTGT+TGG - chr6.2:9206080-9206099 MS.gene031165:CDS 55.0%
AACAACGGATCCCGGCTCCT+TGG + chr6.2:9205786-9205805 None:intergenic 60.0%
AGGCCGGACCTTGTCATTGG+TGG - chr6.2:9205905-9205924 MS.gene031165:CDS 60.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 9203786 9206363 9203786 ID=MS.gene031165
chr6.2 mRNA 9203786 9206363 9203786 ID=MS.gene031165.t1;Parent=MS.gene031165
chr6.2 exon 9205853 9206363 9205853 ID=MS.gene031165.t1.exon1;Parent=MS.gene031165.t1
chr6.2 CDS 9205853 9206363 9205853 ID=cds.MS.gene031165.t1;Parent=MS.gene031165.t1
chr6.2 exon 9203786 9204723 9203786 ID=MS.gene031165.t1.exon2;Parent=MS.gene031165.t1
chr6.2 CDS 9203786 9204723 9203786 ID=cds.MS.gene031165.t1;Parent=MS.gene031165.t1
Gene Sequence

>MS.gene031165

ATGGGAAACTTTGCAAACAGAAAACCACATGCTGTGATGATTCCATATCCAGTTCAAGGCCATATCAATCCATTATTCAAACTAGCAAAGCTTCTTCACCTTAGAGGCTTTCACATAACCTTTGTTAACACTGAATACAATCACAAACGCTTGCTCAAATCAAGAGGTCCGAATGCCTTAGACGGTTTGACTGATTTTAGCTTTGAAACCATCCCAGATGGTCTAACACCACTAGGTGATGGTGATGTTAGTCAAGATGTACCAACTCTTTGTCAATCAGTAAGAAAGAATTTCCTTAAACCCTATTGTGAACTTATTACTAGGCTTAATCACTCTGCCAATGTCCCACCAGTTACTTGCTTAGTTTCTGATTGTTGTATGAGCTTTACTATCCAAGCTGCTGAAGAATTTGCACTCCCAAATGTTCTCTATTTTTCATCTAGTGCATGTTCTTTATTGAATGTGATGTACTTTCGATCTTTTGTAGAAAGAGGTATCATACCATTCAAAGGTACTAAGTTTACTCTCTCTCTCACACACACACACACACACACACATACACATACACATACACATACACATACACATACATATACATATACATATACATATACATATATATATCCACTGAGCCGGTTTTAAGATTTTTGGTGTCCTGGATGAAACAATAAAATTGTGCCCTTTTAATATTATAATATTTTTCTTCTTGTATTTGTTTTAAAAGATTCATTTATTTTCAAAGTTTTCTAAAAATTTATTTTCAATATAATTAATCAAACAGAACCCTCTATATTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAGGGGGCTGCTAACTTACACCCACCTAAAAACACTAAGGTGCAAGTTAGCAAGCTGCACCCACTTATAATTTACTAAAACACCCTTTTGTTTATATTCTAATTAATTTTAAATAAAAGGGCAATTTTGTAACTAACTTAAGAAAGATTCTTAAAAAAAGAAACAAAAAAGAGAATGACATGTTTAAGGTACAAAACATGTAATAAAGACAAACTTTTAAGGAAACAATATTTGGAATGATGAAAGTGGGTGTAAATTAGTGAAAGTTGCTAACTTGCACCTTAATAATACTTATAAAAATGAGTGTAAATAATCAAGTGGGTGTAGGTTGCTAACTTGCACCTTAATAATTTTAGGTGGGTGTAGCTTGCTAACTTGCACCTTAGTGTTTTTAGGTGGGTGTAAGTTAGCAGCCCCCAAGAGTAAGTATTGACAGTTGTTTCCGAAAGTATGTGTGTAAAAATCAACTTACTCCAAGAGTAAGTATTGACATATTGCTATTCCATTTTATTTTTTAAAATTTAGGAAGGGGAAAATTATTACTAATCATAATTTTACAATTGTTTCCGAAAGTATTTCAACTATATGCACTTTGAGACTACAAGGTCAAACTCTTACTGGAGTTTATAACTCATAGAGTAGTTAACACAATTAATAACAATTCAACCGTCAAATTAAAAACTTTCATTGAATGTGTAACACCTTATATATGTGTGTGTATGAACCTTCAAGCAATTAACTTTCGTTCTTATGATATGCGCAGATGAGAGTTATCTTACAAATGGATGTTTGGAAACAAAAGTAGATTGGATTCCAGGTTTGAAAAACTTTCGGTTGAAAGACATTGTTGACTTTATCAGGACAACAAATCCAAATGATATTATGTTGAATTTCTTTATTGAAATTGCAGATAGAGTTAATAGTGACTCTACTATTCTTTTGAATACTTTCAATGAACTTGAGAGTGATGTAATAAATGCTCTCTCCTCTATAATTCCTTCTTTTTACCCTATCGGCCCTTTACCTTCATTATTAAACCAAAATCCACAAATTCATCAATTGGACTCTTTAGATTCCAACCTTTGGAAAGAAGATACTGAGTGTCTTGATTGGCTTGAATCCAAGGAGCCGGGATCCGTTGTTTATGTTAATTTCGGCAGCATTACAGTTATGACACCCGAGCAAATGTTGGAATTTGCTTGGGGTTTGGCCAATTGCAAGAAACCATTTTTGTGGATCATTAGGCCGGACCTTGTCATTGGTGGCTCAGTGATTTTGTCAACTGAGTTTACGAATGAAATTGCAGATAGAGGCCTAATAGCAAGTTGGTGTCCACAAGAGAAAGTGTTGAACCACCCTTCAATCGGCGGATTCTTGACTCATTGTGGATGGAATTCAACCATTGAAAGCATATGCGCTGGAGTGCCGATGTTGTGTTGGCCATTTTTTGCTGATCAGCCAACAGACTGTAGATTTATTTGTAATGAATGGGAGATTGGTATGGAAATTGATACGAATGTGAAGAGAGGGGAGTTGGCCAAGCTGATCAATGAATTGATGGTGGGAGAGAAAGGAAAGACGTTGAGGCAAAATGCAATGGAGTTGAAGAAGAAGGCACAAGAGAACACTAGACCACCAGGTGGTTGTTCATACATGAACTTGGACAAAGTGATTAAGGAGGTGTTGCTTAAACAAAATTAG
Protein sequence

>MS.gene031165.t1

MGNFANRKPHAVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPNALDGLTDFSFETIPDGLTPLGDGDVSQDVPTLCQSVRKNFLKPYCELITRLNHSANVPPVTCLVSDCCMSFTIQAAEEFALPNVLYFSSSACSLLNVMYFRSFVERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLNFFIEIADRVNSDSTILLNTFNELESDVINALSSIIPSFYPIGPLPSLLNQNPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSITVMTPEQMLEFAWGLANCKKPFLWIIRPDLVIGGSVILSTEFTNEIADRGLIASWCPQEKVLNHPSIGGFLTHCGWNSTIESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTNVKRGELAKLINELMVGEKGKTLRQNAMELKKKAQENTRPPGGCSYMNLDKVIKEVLLKQN