AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene86102


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene86102.t1 MTR_6g014220 91.458 480 41 0 1 480 1 480 0.0 906
MS.gene86102.t1 MTR_6g014170 86.667 480 48 1 1 480 1 464 0.0 847
MS.gene86102.t1 MTR_3g008010 80.833 480 92 0 1 480 1 480 0.0 825
MS.gene86102.t1 MTR_6g014250 80.417 480 94 0 1 480 1 480 0.0 820
MS.gene86102.t1 MTR_6g014290 79.792 480 97 0 1 480 1 480 0.0 819
MS.gene86102.t1 MTR_6g014020 73.913 483 122 2 1 480 1 482 0.0 750
MS.gene86102.t1 MTR_6g014040 74.174 484 120 3 1 480 1 483 0.0 744
MS.gene86102.t1 MTR_6g013440 72.727 484 127 3 1 480 1 483 0.0 733
MS.gene86102.t1 MTR_6g014270 73.859 482 120 3 4 480 1 481 0.0 728
MS.gene86102.t1 MTR_6g014200 74.375 480 119 2 4 480 1 479 0.0 724
MS.gene86102.t1 MTR_0288s0020 73.347 484 104 3 1 480 1 463 0.0 724
MS.gene86102.t1 MTR_6g013450 72.107 484 130 3 1 480 1 483 0.0 722
MS.gene86102.t1 MTR_6g014310 73.760 484 122 3 1 480 1 483 0.0 722
MS.gene86102.t1 MTR_8g059425 72.671 483 126 4 1 480 1 480 0.0 718
MS.gene86102.t1 MTR_6g014050 74.793 484 117 3 1 480 1 483 0.0 717
MS.gene86102.t1 MTR_6g014150 72.708 480 127 2 4 480 1 479 0.0 705
MS.gene86102.t1 MTR_6g014300 70.103 485 123 4 1 480 1 468 0.0 700
MS.gene86102.t1 MTR_6g014187 70.807 483 137 2 1 480 1 482 0.0 697
MS.gene86102.t1 MTR_6g011340 71.014 483 136 2 1 480 1 482 0.0 694
MS.gene86102.t1 MTR_6g013960 68.737 483 147 2 1 480 1 482 0.0 691
MS.gene86102.t1 MTR_5g058320 70.062 481 129 3 1 480 1 467 0.0 682
MS.gene86102.t1 MTR_7g011470 69.979 483 127 3 1 480 1 468 0.0 669
MS.gene86102.t1 MTR_6g013900 68.944 483 145 3 1 480 1 481 0.0 666
MS.gene86102.t1 MTR_7g011470 69.358 483 126 3 1 480 1 464 0.0 662
MS.gene86102.t1 MTR_6g013990 68.737 483 145 3 1 480 1 480 0.0 657
MS.gene86102.t1 MTR_6g013920 68.944 483 145 3 1 480 1 481 0.0 657
MS.gene86102.t1 MTR_6g014240 67.925 477 125 3 4 480 1 449 0.0 646
MS.gene86102.t1 MTR_6g014186 63.750 480 132 3 4 480 1 441 0.0 623
MS.gene86102.t1 MTR_5g464810 59.197 473 187 5 10 480 12 480 0.0 582
MS.gene86102.t1 MTR_5g064240 59.197 473 187 5 10 480 12 480 0.0 582
MS.gene86102.t1 MTR_5g464760 57.320 485 197 7 1 479 1 481 0.0 573
MS.gene86102.t1 MTR_0036s0220 57.294 473 196 5 9 479 11 479 0.0 566
MS.gene86102.t1 MTR_2g008210 57.113 478 197 4 5 479 6 478 0.0 554
MS.gene86102.t1 MTR_6g013680 65.734 429 91 5 55 480 2 377 0.0 553
MS.gene86102.t1 MTR_8g043470 61.995 421 110 2 60 480 10 380 0.0 521
MS.gene86102.t1 MTR_3g079480 51.368 475 227 3 6 478 17 489 7.02e-179 511
MS.gene86102.t1 MTR_3g479490 50.947 475 229 3 6 478 2 474 5.48e-177 505
MS.gene86102.t1 MTR_3g479520 49.053 475 238 3 6 478 11 483 5.53e-174 498
MS.gene86102.t1 MTR_4g094220 50.529 473 226 4 8 474 5 475 7.69e-170 487
MS.gene86102.t1 MTR_0477s0010 65.537 354 86 2 128 480 1 319 2.32e-166 472
MS.gene86102.t1 MTR_6g014190 74.483 290 73 1 191 480 1 289 1.23e-162 461
MS.gene86102.t1 MTR_6g014160 52.588 483 138 7 1 480 1 395 8.90e-161 461
MS.gene86102.t1 MTR_3g479470 48.203 473 242 2 6 477 9 479 1.79e-157 456
MS.gene86102.t1 MTR_0199s0010 78.367 245 52 1 1 245 1 244 4.10e-139 401
MS.gene86102.t1 MTR_6g013435 58.475 354 101 6 128 480 1 309 9.65e-133 386
MS.gene86102.t1 MTR_6g014185 52.425 433 97 10 47 478 21 345 6.74e-130 381
MS.gene86102.t1 MTR_8g007585 85.437 206 30 0 275 480 189 394 2.59e-128 378
MS.gene86102.t1 MTR_8g007585 75.789 190 45 1 1 190 1 189 2.43e-100 306
MS.gene86102.t1 MTR_3g479610 53.398 309 142 2 172 478 5 313 4.44e-118 349
MS.gene86102.t1 MTR_0891s0010 49.655 290 144 2 191 478 1 290 2.79e-105 315
MS.gene86102.t1 MTR_6g013890 56.679 277 64 5 172 447 23 244 7.53e-98 295
MS.gene86102.t1 MTR_5g066390 84.375 160 25 0 321 480 58 217 1.80e-97 293
MS.gene86102.t1 MTR_3g069710 36.596 470 264 10 12 478 14 452 2.53e-93 291
MS.gene86102.t1 MTR_6g014195 69.231 195 57 1 1 192 1 195 5.90e-92 278
MS.gene86102.t1 MTR_5g031840 35.430 477 281 13 9 477 4 461 1.44e-87 276
MS.gene86102.t1 MTR_5g031860 35.404 483 274 13 9 477 11 469 1.23e-85 271
MS.gene86102.t1 MTR_3g069690 33.970 471 277 10 12 478 10 450 2.11e-84 268
MS.gene86102.t1 MTR_5g031830 34.783 483 278 12 9 477 11 470 5.38e-84 267
MS.gene86102.t1 MTR_4g064987 33.544 474 275 10 12 478 10 450 3.04e-80 256
MS.gene86102.t1 MTR_1g107380 32.305 486 289 10 10 479 13 474 2.26e-79 255
MS.gene86102.t1 MTR_4g064987 33.333 477 266 12 12 478 10 444 2.70e-76 246
MS.gene86102.t1 MTR_6g038240 31.535 482 292 13 6 480 7 457 6.40e-74 240
MS.gene86102.t1 MTR_2086s0010 61.047 172 66 1 308 478 1 172 1.59e-73 230
MS.gene86102.t1 MTR_1996s0010 61.047 172 66 1 308 478 1 172 1.59e-73 230
MS.gene86102.t1 MTR_4g095008 31.950 482 288 14 12 480 13 467 6.77e-73 240
MS.gene86102.t1 MTR_7g013200 32.128 470 278 11 9 474 4 436 5.91e-72 234
MS.gene86102.t1 MTR_7g013240 31.447 477 271 13 9 474 5 436 7.58e-72 234
MS.gene86102.t1 MTR_7g013260 32.150 479 266 14 9 474 5 437 3.59e-71 233
MS.gene86102.t1 MTR_6g014000 79.231 130 27 0 349 478 27 156 7.33e-71 233
MS.gene86102.t1 MTR_3g049970 30.769 481 300 11 10 477 9 469 6.63e-70 230
MS.gene86102.t1 MTR_1g107350 31.070 486 292 12 10 477 8 468 2.93e-69 229
MS.gene86102.t1 MTR_4g094920 31.365 491 295 16 5 480 19 482 1.08e-68 228
MS.gene86102.t1 MTR_6g038300 31.092 476 295 11 9 479 10 457 1.94e-68 226
MS.gene86102.t1 MTR_8g064870 30.658 486 292 13 12 477 13 473 2.12e-67 224
MS.gene86102.t1 MTR_7g013220 29.707 478 290 10 9 474 4 447 4.44e-67 222
MS.gene86102.t1 MTR_6g038230 29.895 475 297 12 6 474 7 451 6.72e-67 222
MS.gene86102.t1 MTR_5g035580 30.208 480 286 11 6 474 9 450 2.68e-66 221
MS.gene86102.t1 MTR_1g032490 30.498 482 300 11 10 477 10 470 8.58e-66 219
MS.gene86102.t1 MTR_7g013180 30.041 486 283 13 1 474 1 441 1.03e-64 216
MS.gene86102.t1 MTR_6g038220 30.608 477 290 15 6 474 7 450 3.67e-64 214
MS.gene86102.t1 MTR_7g080950 29.079 478 299 11 8 478 4 448 6.14e-64 214
MS.gene86102.t1 MTR_8g083290 30.584 497 284 18 9 478 2 464 2.01e-63 213
MS.gene86102.t1 MTR_1g107315 31.020 490 303 12 1 477 1 468 3.72e-63 213
MS.gene86102.t1 MTR_7g080940 29.560 477 298 14 8 478 9 453 7.31e-63 211
MS.gene86102.t1 MTR_8g088560 30.335 478 293 14 10 477 10 457 1.16e-62 211
MS.gene86102.t1 MTR_6g038200 30.462 476 293 15 6 474 7 451 1.28e-62 211
MS.gene86102.t1 MTR_5g016480 30.247 486 298 18 11 478 9 471 2.21e-62 211
MS.gene86102.t1 MTR_7g080935 29.498 478 297 13 8 478 9 453 2.42e-62 210
MS.gene86102.t1 MTR_1g107365 30.642 483 295 11 5 477 39 491 6.21e-62 210
MS.gene86102.t1 MTR_5g035560 29.132 484 294 12 6 478 7 452 2.46e-61 208
MS.gene86102.t1 MTR_1g107285 31.340 485 283 15 12 477 10 463 5.19e-61 207
MS.gene86102.t1 MTR_1g107360 30.328 488 296 14 5 477 3 461 1.60e-60 206
MS.gene86102.t1 MTR_1g107375 29.668 482 289 13 10 477 8 453 2.63e-60 204
MS.gene86102.t1 MTR_5g072810 29.675 492 290 14 1 477 3 453 3.68e-60 204
MS.gene86102.t1 MTR_5g075440 29.303 488 285 13 10 478 10 456 2.17e-59 202
MS.gene86102.t1 MTR_3g084520 30.661 499 283 16 10 477 6 472 3.96e-59 202
MS.gene86102.t1 MTR_0475s0020 74.242 132 30 2 1 128 1 132 8.90e-59 192
MS.gene86102.t1 MTR_8g064880 29.870 462 279 14 12 451 11 449 3.58e-58 199
MS.gene86102.t1 MTR_7g117405 32.164 513 269 19 6 478 8 481 1.49e-56 195
MS.gene86102.t1 MTR_6g033725 29.569 487 283 14 12 473 6 457 6.10e-56 193
MS.gene86102.t1 MTR_5g072860 29.193 483 294 14 10 478 18 466 1.02e-55 192
MS.gene86102.t1 MTR_3g084540 31.504 492 289 16 10 477 6 473 1.34e-55 192
MS.gene86102.t1 MTR_4g024020 30.620 516 279 16 8 478 7 488 1.40e-55 193
MS.gene86102.t1 MTR_5g072830 28.986 483 284 15 10 477 10 448 1.01e-54 189
MS.gene86102.t1 MTR_3g084530 30.143 491 296 15 10 477 6 472 1.50e-54 189
MS.gene86102.t1 MTR_8g083280 29.959 484 292 13 12 478 9 462 1.99e-54 189
MS.gene86102.t1 MTR_6g033625 29.352 494 290 14 8 475 2 462 2.63e-54 189
MS.gene86102.t1 MTR_7g080900 28.008 482 307 17 5 478 7 456 4.53e-54 188
MS.gene86102.t1 MTR_7g071040 28.515 505 303 14 5 477 12 490 5.87e-54 189
MS.gene86102.t1 MTR_0184s0030 27.105 487 297 11 10 470 6 460 9.16e-54 187
MS.gene86102.t1 MTR_4g485630 28.283 495 306 12 6 477 5 473 1.16e-53 187
MS.gene86102.t1 MTR_5g072840 28.986 483 286 14 10 478 10 449 4.11e-53 185
MS.gene86102.t1 MTR_7g102450 29.899 495 290 15 9 478 10 472 1.14e-52 185
MS.gene86102.t1 MTR_8g009073 28.659 492 286 13 10 473 6 460 1.32e-52 184
MS.gene86102.t1 MTR_7g070610 27.888 502 300 15 10 477 13 486 3.55e-52 184
MS.gene86102.t1 MTR_5g045960 28.180 511 304 16 4 478 3 486 5.17e-52 183
MS.gene86102.t1 MTR_5g072820 29.132 484 282 16 10 477 10 448 8.14e-52 182
MS.gene86102.t1 MTR_7g070800 28.257 499 298 16 10 477 6 475 2.49e-51 181
MS.gene86102.t1 MTR_6g033660 28.834 489 286 15 12 473 6 459 3.99e-51 181
MS.gene86102.t1 MTR_6g033675 27.621 496 284 14 12 473 6 460 4.90e-51 181
MS.gene86102.t1 MTR_4g108250 26.535 505 316 15 5 477 6 487 5.24e-50 178
MS.gene86102.t1 MTR_8g008970 27.236 492 293 13 10 473 6 460 1.31e-49 181
MS.gene86102.t1 MTR_8g008970 33.597 253 145 6 229 473 547 784 7.37e-33 132
MS.gene86102.t1 MTR_0184s0040 28.947 494 289 12 10 476 21 479 1.71e-49 176
MS.gene86102.t1 MTR_0078s0190 28.947 494 289 12 10 476 21 479 1.71e-49 176
MS.gene86102.t1 MTR_5g045970 28.743 501 302 16 10 478 16 493 2.30e-49 176
MS.gene86102.t1 MTR_7g070660 27.944 501 296 16 10 477 11 479 7.03e-49 175
MS.gene86102.t1 MTR_8g006710 29.400 500 281 20 6 473 2 461 1.14e-48 174
MS.gene86102.t1 MTR_8g009063 27.525 505 291 15 3 473 6 469 1.50e-48 174
MS.gene86102.t1 MTR_6g005600 29.051 506 273 20 8 473 4 463 1.66e-48 174
MS.gene86102.t1 MTR_7g102560 29.400 500 298 17 10 478 9 484 2.35e-48 173
MS.gene86102.t1 MTR_7g117170 28.425 489 295 14 9 473 14 471 2.38e-48 173
MS.gene86102.t1 MTR_6g033615 27.629 485 288 14 12 475 6 448 2.94e-48 172
MS.gene86102.t1 MTR_7g055710 27.451 510 289 15 10 476 11 482 3.02e-48 173
MS.gene86102.t1 MTR_8g009050 31.300 377 216 9 118 473 108 462 4.92e-48 172
MS.gene86102.t1 MTR_3g479620 47.590 166 85 1 6 171 2 165 5.45e-48 163
MS.gene86102.t1 MTR_8g009055 29.365 504 279 19 10 480 6 465 6.83e-48 172
MS.gene86102.t1 MTR_8g009067 26.775 493 296 13 10 474 6 461 7.77e-48 172
MS.gene86102.t1 MTR_7g070910 27.092 502 314 13 5 477 6 484 8.03e-48 172
MS.gene86102.t1 MTR_7g070860 27.345 501 294 16 6 477 3 462 8.37e-48 172
MS.gene86102.t1 MTR_8g008990 28.685 502 287 16 10 480 6 467 1.45e-47 171
MS.gene86102.t1 MTR_8g027870 28.571 497 288 15 9 480 17 471 1.56e-47 171
MS.gene86102.t1 MTR_7g070780 26.984 504 301 16 10 477 11 483 1.71e-47 171
MS.gene86102.t1 MTR_4g128690 29.854 479 284 12 10 477 15 452 2.24e-47 170
MS.gene86102.t1 MTR_7g070940 27.756 508 291 19 6 477 5 472 2.27e-47 171
MS.gene86102.t1 MTR_8g066610 28.367 490 308 17 10 477 9 477 2.55e-47 171
MS.gene86102.t1 MTR_4g008630 27.515 487 292 16 12 477 16 462 2.66e-47 170
MS.gene86102.t1 MTR_8g009067 30.641 359 208 9 135 474 7 343 3.76e-47 167
MS.gene86102.t1 MTR_5g098960 29.120 443 282 12 7 445 4 418 3.76e-47 169
MS.gene86102.t1 MTR_8g009073 34.426 305 168 7 188 473 40 331 4.42e-47 166
MS.gene86102.t1 MTR_1g029540 26.556 482 294 17 15 477 19 459 7.30e-47 169
MS.gene86102.t1 MTR_8g077590 31.070 383 216 11 113 473 106 462 8.91e-47 169
MS.gene86102.t1 MTR_7g070930 26.243 503 317 14 5 477 9 487 9.60e-47 169
MS.gene86102.t1 MTR_5g090700 27.022 507 304 15 7 478 2 477 1.25e-46 169
MS.gene86102.t1 MTR_3g009510 28.370 497 294 17 12 475 7 474 1.33e-46 168
MS.gene86102.t1 MTR_3g031400 27.708 480 289 14 10 478 18 450 2.25e-46 167
MS.gene86102.t1 MTR_8g027885 28.773 497 287 15 9 480 17 471 3.18e-46 167
MS.gene86102.t1 MTR_3g031450 27.835 485 284 17 10 478 18 452 3.93e-46 167
MS.gene86102.t1 MTR_7g102460 28.317 505 306 17 8 480 7 487 4.96e-46 167
MS.gene86102.t1 MTR_7g102550 29.730 518 292 16 1 478 1 486 5.00e-46 167
MS.gene86102.t1 MTR_7g102490 28.543 501 312 18 8 480 7 489 5.03e-46 167
MS.gene86102.t1 MTR_1g019510 27.126 494 290 15 10 473 6 459 8.72e-46 166
MS.gene86102.t1 MTR_5g070090 26.844 488 308 13 6 477 7 461 2.99e-45 164
MS.gene86102.t1 MTR_6g023665 27.879 495 292 16 7 473 10 467 3.02e-45 165
MS.gene86102.t1 MTR_8g012745 28.777 417 227 12 84 471 87 462 3.40e-45 164
MS.gene86102.t1 MTR_1g062380 27.011 522 285 19 10 478 16 494 3.55e-45 165
MS.gene86102.t1 MTR_4g128720 28.302 477 303 11 7 477 12 455 5.16e-45 164
MS.gene86102.t1 MTR_6g488280 26.735 490 294 15 12 473 8 460 5.30e-45 164
MS.gene86102.t1 MTR_0428s0010 26.735 490 294 15 12 473 8 460 5.30e-45 164
MS.gene86102.t1 MTR_7g070810 27.291 502 296 20 10 477 9 475 6.09e-45 164
MS.gene86102.t1 MTR_8g006260 28.807 486 288 18 8 466 4 458 6.57e-45 164
MS.gene86102.t1 MTR_0078s0010 27.158 475 288 14 7 456 3 444 8.60e-45 163
MS.gene86102.t1 MTR_7g070740 26.096 502 318 14 5 477 6 483 1.06e-44 164
MS.gene86102.t1 MTR_7g046490 27.968 497 290 16 7 474 3 460 1.18e-44 163
MS.gene86102.t1 MTR_4g031800 27.403 489 297 14 13 474 12 469 1.98e-44 162
MS.gene86102.t1 MTR_7g047030 26.834 477 287 12 7 456 3 444 3.19e-44 162
MS.gene86102.t1 MTR_7g047270 26.834 477 287 12 7 456 3 444 3.19e-44 162
MS.gene86102.t1 MTR_5g087620 26.459 514 322 19 1 478 1 494 4.27e-44 162
MS.gene86102.t1 MTR_1g040310 28.571 490 305 16 11 477 16 483 5.87e-44 162
MS.gene86102.t1 MTR_8g012650 32.086 374 187 13 118 456 109 450 1.67e-43 160
MS.gene86102.t1 MTR_5g067170 27.733 494 300 15 13 477 14 479 4.77e-43 159
MS.gene86102.t1 MTR_8g006730 28.425 489 301 18 6 473 2 462 5.75e-43 158
MS.gene86102.t1 MTR_2g035020 27.381 504 291 18 13 477 14 481 2.41e-42 157
MS.gene86102.t1 MTR_0536s0020 27.328 494 295 13 13 477 21 479 5.00e-42 156
MS.gene86102.t1 MTR_4g117950 27.912 498 282 19 13 477 9 462 8.01e-42 155
MS.gene86102.t1 MTR_8g074550 27.953 508 295 21 10 475 8 486 8.10e-42 156
MS.gene86102.t1 MTR_8g012635 30.467 407 206 14 84 456 87 450 2.14e-41 154
MS.gene86102.t1 MTR_5g090620 24.308 506 310 14 7 474 2 472 7.21e-41 153
MS.gene86102.t1 MTR_5g090630 26.943 386 235 8 119 478 102 466 8.20e-41 152
MS.gene86102.t1 MTR_2g035040 28.010 382 231 10 121 477 24 386 1.03e-40 150
MS.gene86102.t1 MTR_4g117890 26.477 491 297 11 13 474 16 471 1.38e-40 152
MS.gene86102.t1 MTR_4g485620 28.125 480 291 16 24 477 3 454 1.64e-40 151
MS.gene86102.t1 MTR_5g016660 28.119 505 299 20 8 477 8 483 1.69e-40 152
MS.gene86102.t1 MTR_5g098930 25.977 512 294 18 7 478 2 468 2.12e-40 151
MS.gene86102.t1 MTR_5g090660 25.743 505 309 17 7 478 2 473 2.83e-40 152
MS.gene86102.t1 MTR_5g004940 37.374 198 109 2 282 477 193 377 3.00e-40 149
MS.gene86102.t1 MTR_5g090670 26.087 506 310 16 7 478 2 477 3.05e-40 151
MS.gene86102.t1 MTR_8g465670 27.146 501 295 16 7 474 4 467 3.76e-40 150
MS.gene86102.t1 MTR_5g040030 25.761 493 318 13 12 477 16 487 4.09e-40 151
MS.gene86102.t1 MTR_5g039900 25.813 492 316 13 12 477 15 483 1.78e-39 149
MS.gene86102.t1 MTR_6g035295 26.535 505 298 17 12 477 14 484 2.54e-39 149
MS.gene86102.t1 MTR_5g019580 25.149 505 318 13 4 476 1 477 4.02e-39 148
MS.gene86102.t1 MTR_6g035185 26.233 507 294 17 13 477 14 482 5.05e-39 148
MS.gene86102.t1 MTR_0009s0240 27.163 497 292 18 5 474 2 455 6.08e-39 147
MS.gene86102.t1 MTR_5g090580 25.099 506 313 15 7 478 2 475 6.08e-39 147
MS.gene86102.t1 MTR_8g044140 28.084 381 230 11 122 477 87 448 6.67e-39 147
MS.gene86102.t1 MTR_8g090095 37.559 213 110 4 285 477 270 479 1.16e-38 147
MS.gene86102.t1 MTR_7g012120 27.525 505 286 19 13 477 19 483 1.60e-38 146
MS.gene86102.t1 MTR_7g071050 26.087 483 246 15 5 452 8 414 1.63e-38 145
MS.gene86102.t1 MTR_0078s0060 27.557 479 274 16 10 456 6 443 2.65e-38 145
MS.gene86102.t1 MTR_8g012630 40.104 192 95 4 285 456 203 394 3.24e-38 144
MS.gene86102.t1 MTR_8g012730 40.212 189 93 4 288 456 99 287 4.37e-38 141
MS.gene86102.t1 MTR_4g117960 26.946 501 296 18 13 477 14 480 4.78e-38 145
MS.gene86102.t1 MTR_8g071070 26.680 491 316 13 4 475 1 466 8.77e-38 144
MS.gene86102.t1 MTR_2g040530 28.272 382 222 9 119 477 112 464 1.54e-37 143
MS.gene86102.t1 MTR_0536s0010 26.572 493 294 16 13 477 24 476 1.66e-37 144
MS.gene86102.t1 MTR_2g034990 26.839 503 295 16 13 477 14 481 1.81e-37 144
MS.gene86102.t1 MTR_4g118000 25.610 492 299 12 13 477 15 466 3.46e-37 142
MS.gene86102.t1 MTR_7g102520 28.343 501 304 20 10 478 12 489 3.88e-37 143
MS.gene86102.t1 MTR_1g019520 37.681 207 112 4 284 473 2 208 4.15e-37 136
MS.gene86102.t1 MTR_8g006270 24.800 500 306 17 7 476 3 462 7.87e-37 141
MS.gene86102.t1 MTR_5g070040 26.899 487 306 14 7 474 8 463 8.03e-37 141
MS.gene86102.t1 MTR_4g117980 32.292 288 168 7 214 477 197 481 8.34e-37 142
MS.gene86102.t1 MTR_5g029800 26.411 496 302 15 13 477 14 477 8.99e-37 141
MS.gene86102.t1 MTR_2g046750 25.956 497 307 13 8 477 3 465 1.99e-36 140
MS.gene86102.t1 MTR_4g485640 26.931 479 294 19 20 475 219 664 3.15e-36 142
MS.gene86102.t1 MTR_4g082820 28.163 490 295 17 10 476 7 462 6.29e-36 139
MS.gene86102.t1 MTR_7g070870 26.829 492 290 20 7 477 16 458 1.42e-35 138
MS.gene86102.t1 MTR_2g046820 28.010 382 223 9 119 477 110 462 1.92e-35 137
MS.gene86102.t1 MTR_2g098430 26.471 510 297 20 7 474 3 476 3.91e-35 137
MS.gene86102.t1 MTR_5g090600 25.553 497 301 19 7 478 2 454 4.15e-35 136
MS.gene86102.t1 MTR_5g019580 26.181 508 283 16 3 476 52 501 6.62e-35 137
MS.gene86102.t1 MTR_5g090610 24.756 513 290 17 7 477 2 460 1.02e-34 135
MS.gene86102.t1 MTR_6g035265 26.016 492 305 16 13 477 14 473 1.74e-34 135
MS.gene86102.t1 MTR_2g059240 25.205 488 325 14 6 479 9 470 1.90e-34 135
MS.gene86102.t1 MTR_8g007565 26.477 457 297 15 10 451 7 439 2.02e-34 135
MS.gene86102.t1 MTR_8g007650 26.477 457 297 15 10 451 7 439 3.98e-34 134
MS.gene86102.t1 MTR_7g067330 27.912 455 267 17 7 454 6 406 1.78e-33 131
MS.gene86102.t1 MTR_8g032950 29.293 297 182 6 206 477 187 480 1.81e-33 132
MS.gene86102.t1 MTR_7g039550 32.917 240 145 4 253 477 23 261 2.19e-33 127
MS.gene86102.t1 MTR_8g006220 26.600 500 265 18 7 453 3 453 1.36e-32 130
MS.gene86102.t1 MTR_7g067120 28.009 457 264 18 7 454 6 406 2.61e-32 128
MS.gene86102.t1 MTR_6g078320 24.644 491 323 15 10 476 11 478 3.97e-32 128
MS.gene86102.t1 MTR_4g485590 26.415 424 248 14 10 420 9 381 1.36e-31 125
MS.gene86102.t1 MTR_7g470610 33.990 203 121 5 230 424 76 273 2.67e-31 122
MS.gene86102.t1 MTR_7g070583 33.990 203 121 5 230 424 76 273 2.67e-31 122
MS.gene86102.t1 MTR_5g066410 27.152 453 278 16 13 451 1 415 3.16e-31 125
MS.gene86102.t1 MTR_4g082810 29.371 286 174 7 136 410 127 395 6.42e-31 124
MS.gene86102.t1 MTR_2g008226 27.158 475 299 17 1 455 1 448 7.10e-31 124
MS.gene86102.t1 MTR_5g072850 32.824 262 148 9 176 433 110 347 8.54e-31 123
MS.gene86102.t1 MTR_3g009490 36.413 184 97 4 312 475 3 186 2.17e-30 117
MS.gene86102.t1 MTR_0475s0030 80.000 65 13 0 370 434 11 75 5.22e-30 112
MS.gene86102.t1 MTR_8g009840 35.233 193 103 5 301 473 331 521 4.98e-29 120
MS.gene86102.t1 MTR_8g466240 25.673 483 311 18 8 477 6 453 6.07e-29 119
MS.gene86102.t1 MTR_6g042310 26.813 455 292 17 10 454 18 441 6.56e-29 119
MS.gene86102.t1 MTR_1g107325 41.860 129 69 1 355 477 224 352 1.71e-28 116
MS.gene86102.t1 MTR_5g027210 29.804 255 142 8 221 444 205 453 1.90e-28 118
MS.gene86102.t1 MTR_7g070995 38.298 141 72 3 352 477 4 144 3.80e-26 104
MS.gene86102.t1 MTR_8g068340 25.216 464 296 15 10 453 12 444 2.64e-25 108
MS.gene86102.t1 MTR_6g036650 24.204 471 306 15 3 454 10 448 6.66e-25 107
MS.gene86102.t1 MTR_8g068360 23.261 460 309 13 10 453 12 443 1.39e-23 103
MS.gene86102.t1 MTR_7g080960 29.245 212 103 4 267 478 307 471 5.38e-23 102
MS.gene86102.t1 MTR_7g070760 31.313 198 109 4 225 420 29 201 1.20e-22 96.3
MS.gene86102.t1 MTR_8g068330 24.731 465 297 17 10 453 8 440 1.78e-22 100
MS.gene86102.t1 MTR_4g123553 32.948 173 107 5 288 454 269 438 7.90e-21 95.5
MS.gene86102.t1 MTR_0536s0030 28.618 304 165 10 199 477 75 351 1.34e-20 93.6
MS.gene86102.t1 MTR_3g435310 31.214 173 110 4 288 454 228 397 1.52e-20 94.0
MS.gene86102.t1 MTR_5g090690 24.451 319 179 8 83 388 36 305 2.14e-20 93.2
MS.gene86102.t1 MTR_1g090270 23.673 490 281 21 3 454 8 442 2.68e-20 93.6
MS.gene86102.t1 MTR_2g008220 24.524 473 307 17 1 454 1 442 3.31e-20 93.6
MS.gene86102.t1 MTR_0078s0200 24.096 332 211 8 10 332 6 305 1.12e-19 90.1
MS.gene86102.t1 MTR_8g056740 35.461 141 82 3 284 420 166 301 2.10e-18 87.4
MS.gene86102.t1 MTR_2g008225 30.636 173 111 4 288 454 274 443 3.54e-18 87.4
MS.gene86102.t1 MTR_6g013970 54.878 82 28 3 127 203 38 115 3.81e-18 83.6
MS.gene86102.t1 MTR_4g059370 26.295 251 155 8 219 454 134 369 1.64e-17 84.7
MS.gene86102.t1 MTR_2g046620 29.480 173 113 4 288 454 270 439 5.07e-17 83.6
MS.gene86102.t1 MTR_4g077960 27.572 243 157 9 221 454 183 415 9.03e-17 82.8
MS.gene86102.t1 MTR_2g014900 29.167 168 110 4 288 446 258 425 1.49e-16 82.4
MS.gene86102.t1 MTR_4g079250 27.670 206 142 4 282 480 255 460 4.25e-16 80.9
MS.gene86102.t1 MTR_4g079270 29.534 193 119 6 233 421 217 396 1.08e-15 79.7
MS.gene86102.t1 MTR_8g006230 28.111 217 130 6 119 332 52 245 5.61e-14 72.8
MS.gene86102.t1 MTR_1g090280 29.012 162 102 5 306 454 131 292 1.75e-13 71.6
MS.gene86102.t1 MTR_2g083430 28.962 183 120 5 282 454 253 435 3.77e-12 68.6
MS.gene86102.t1 MTR_6g015160 49.057 53 26 1 372 423 30 82 6.54e-12 62.0
MS.gene86102.t1 MTR_8g028755 28.571 168 87 5 282 448 97 232 8.09e-12 65.5
MS.gene86102.t1 MTR_5g058330 57.407 54 22 1 212 264 11 64 1.20e-11 60.8
MS.gene86102.t1 MTR_2g083490 29.714 175 116 4 288 459 259 429 1.43e-11 66.6
MS.gene86102.t1 MTR_2g083480 27.368 190 128 5 286 465 257 446 2.01e-11 66.2
MS.gene86102.t1 MTR_1g107340 24.806 258 159 9 12 257 10 244 9.00e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene86102.t1 AT1G22360 55.094 481 212 3 1 479 1 479 0.0 568
MS.gene86102.t1 AT1G22380 55.368 475 208 3 7 479 10 482 0.0 563
MS.gene86102.t1 AT1G22340 55.136 477 209 4 7 480 10 484 0.0 562
MS.gene86102.t1 AT1G22400 53.669 477 216 4 6 479 9 483 0.0 554
MS.gene86102.t1 AT1G22360 53.222 481 209 4 1 479 1 467 0.0 542
MS.gene86102.t1 AT1G22370 55.115 479 202 5 5 479 8 477 0.0 533
MS.gene86102.t1 AT1G78270 50.830 482 227 6 2 478 5 481 0.0 518
MS.gene86102.t1 AT1G22370 55.116 303 130 3 181 479 7 307 1.97e-112 334
MS.gene86102.t1 AT5G59590 35.654 474 265 12 7 474 7 446 1.70e-85 270
MS.gene86102.t1 AT3G11340 33.895 475 274 11 8 478 7 445 3.66e-85 269
MS.gene86102.t1 AT3G46680 33.610 482 263 11 8 474 7 446 4.04e-82 261
MS.gene86102.t1 AT3G46690 34.672 473 272 10 8 475 7 447 4.41e-81 259
MS.gene86102.t1 AT3G46700 33.682 478 269 12 8 477 7 444 1.95e-80 257
MS.gene86102.t1 AT5G59580 34.382 477 264 13 8 474 7 444 3.52e-80 256
MS.gene86102.t1 AT3G46670 34.110 472 269 12 10 474 9 445 9.19e-80 255
MS.gene86102.t1 AT5G38010 34.086 487 273 13 1 475 1 451 1.57e-79 255
MS.gene86102.t1 AT3G46650 33.546 471 258 10 8 473 8 428 3.92e-78 251
MS.gene86102.t1 AT2G36970 31.174 494 299 12 1 477 1 470 2.42e-77 250
MS.gene86102.t1 AT5G38040 32.688 465 269 12 19 475 19 447 8.43e-77 248
MS.gene86102.t1 AT5G05860 32.842 475 280 9 10 479 9 449 2.49e-76 246
MS.gene86102.t1 AT3G55700 33.542 480 268 16 12 478 10 451 3.69e-76 246
MS.gene86102.t1 AT3G46660 33.544 474 267 13 12 474 16 452 2.20e-75 244
MS.gene86102.t1 AT5G05900 31.027 477 283 9 10 477 8 447 3.13e-75 243
MS.gene86102.t1 AT5G05870 31.513 476 289 7 10 477 8 454 2.09e-74 242
MS.gene86102.t1 AT3G46720 33.049 469 274 9 8 474 7 437 2.88e-74 241
MS.gene86102.t1 AT3G21560 31.855 496 283 14 9 480 11 475 1.92e-73 240
MS.gene86102.t1 AT5G05880 30.149 471 290 9 10 474 8 445 3.11e-72 236
MS.gene86102.t1 AT2G28080 32.150 479 287 14 14 480 22 474 3.57e-72 236
MS.gene86102.t1 AT5G05890 32.000 475 280 11 10 474 8 449 1.64e-70 231
MS.gene86102.t1 AT4G15490 31.237 493 294 15 6 480 4 469 1.36e-69 229
MS.gene86102.t1 AT2G26480 31.250 480 288 11 7 480 5 448 1.04e-68 226
MS.gene86102.t1 AT4G15500 30.658 486 291 12 9 478 8 463 3.86e-68 226
MS.gene86102.t1 AT4G15480 31.557 488 286 15 10 477 19 478 1.63e-66 222
MS.gene86102.t1 AT3G55710 31.106 479 285 15 12 478 10 455 7.75e-66 219
MS.gene86102.t1 AT1G05680 29.140 477 293 13 10 474 6 449 1.45e-63 213
MS.gene86102.t1 AT3G02100 29.218 486 302 15 1 474 1 456 1.59e-62 211
MS.gene86102.t1 AT1G05675 28.723 470 304 11 10 474 6 449 2.87e-62 209
MS.gene86102.t1 AT2G31750 28.125 480 306 11 8 478 6 455 7.78e-62 209
MS.gene86102.t1 AT2G31750 28.125 480 306 11 8 478 6 455 1.22e-61 209
MS.gene86102.t1 AT2G23260 29.508 488 302 14 1 479 1 455 8.74e-60 203
MS.gene86102.t1 AT2G43840 28.333 480 302 11 8 480 5 449 2.50e-59 202
MS.gene86102.t1 AT4G01070 31.288 489 280 13 6 470 4 460 4.87e-59 202
MS.gene86102.t1 AT2G31790 28.512 477 304 10 7 474 5 453 5.09e-59 201
MS.gene86102.t1 AT2G23250 31.158 475 277 18 13 477 1 435 5.28e-59 201
MS.gene86102.t1 AT2G43820 28.364 483 302 12 6 480 3 449 2.28e-58 199
MS.gene86102.t1 AT2G43840 28.125 480 303 11 8 480 5 449 2.78e-58 199
MS.gene86102.t1 AT2G36800 31.014 503 287 16 10 478 12 488 1.63e-56 196
MS.gene86102.t1 AT2G30140 30.328 488 279 15 6 477 9 451 5.49e-56 193
MS.gene86102.t1 AT2G36770 29.762 504 291 21 10 478 14 489 6.97e-56 194
MS.gene86102.t1 AT2G30140 30.328 488 278 15 6 477 9 450 8.41e-56 192
MS.gene86102.t1 AT2G36790 33.002 503 276 19 10 478 13 488 3.59e-55 192
MS.gene86102.t1 AT1G05560 27.515 487 296 14 9 477 4 451 3.12e-54 189
MS.gene86102.t1 AT1G05560 27.515 487 296 14 9 477 54 501 8.16e-54 189
MS.gene86102.t1 AT2G36760 29.400 500 298 18 10 478 14 489 1.05e-53 188
MS.gene86102.t1 AT2G15480 28.313 498 318 12 1 477 1 480 1.71e-53 187
MS.gene86102.t1 AT1G01420 31.377 494 272 17 9 473 7 462 5.41e-53 186
MS.gene86102.t1 AT1G01420 31.377 494 272 17 9 473 10 465 7.07e-53 186
MS.gene86102.t1 AT2G36780 30.219 503 290 18 10 478 14 489 1.42e-52 185
MS.gene86102.t1 AT4G15550 28.773 497 289 17 9 476 12 472 1.42e-52 184
MS.gene86102.t1 AT2G30150 29.668 482 283 14 10 477 13 452 1.63e-52 184
MS.gene86102.t1 AT3G53150 28.516 519 297 16 7 478 19 510 2.31e-52 185
MS.gene86102.t1 AT4G34131 28.169 497 317 12 1 476 1 478 2.95e-52 184
MS.gene86102.t1 AT2G15490 29.209 493 302 13 10 477 7 477 6.01e-52 183
MS.gene86102.t1 AT2G15480 27.953 508 317 13 1 477 1 490 9.07e-52 183
MS.gene86102.t1 AT1G10400 29.918 488 292 16 8 476 5 461 1.06e-51 182
MS.gene86102.t1 AT3G53160 30.693 505 285 18 10 478 8 483 1.13e-51 182
MS.gene86102.t1 AT2G15490 29.032 496 302 13 10 477 7 480 2.22e-51 181
MS.gene86102.t1 AT2G30150 29.498 478 281 14 14 477 1 436 3.72e-51 180
MS.gene86102.t1 AT4G14090 27.347 490 299 14 3 476 6 454 8.32e-51 179
MS.gene86102.t1 AT5G14860 30.297 505 278 19 10 477 8 475 1.64e-50 179
MS.gene86102.t1 AT5G66690 28.291 509 278 18 8 476 5 466 1.88e-50 179
MS.gene86102.t1 AT2G16890 28.773 497 287 18 10 477 9 467 1.14e-49 177
MS.gene86102.t1 AT5G17050 27.349 479 313 11 6 478 8 457 1.54e-49 176
MS.gene86102.t1 AT5G26310 27.505 509 282 16 8 476 5 466 2.87e-49 176
MS.gene86102.t1 AT2G36750 29.563 504 291 20 10 478 10 484 6.55e-49 175
MS.gene86102.t1 AT1G05530 26.069 491 305 15 8 478 3 455 5.73e-48 172
MS.gene86102.t1 AT3G16520 31.165 369 218 12 119 475 113 457 9.05e-48 171
MS.gene86102.t1 AT3G50740 27.432 514 282 16 8 476 5 472 1.25e-47 171
MS.gene86102.t1 AT1G01390 31.791 497 277 14 9 480 7 466 2.36e-47 171
MS.gene86102.t1 AT1G01390 31.791 497 277 14 9 480 24 483 2.99e-47 171
MS.gene86102.t1 AT1G30530 29.363 361 232 6 119 478 113 451 7.87e-47 169
MS.gene86102.t1 AT3G16520 31.624 351 204 12 119 457 113 439 1.83e-46 167
MS.gene86102.t1 AT3G16520 31.624 351 204 12 119 457 113 439 2.59e-46 167
MS.gene86102.t1 AT5G17030 26.230 488 306 12 6 478 8 456 9.21e-46 166
MS.gene86102.t1 AT5G17040 26.737 475 303 11 10 478 5 440 1.74e-45 164
MS.gene86102.t1 AT1G24100 27.551 490 295 15 8 477 9 458 4.57e-45 164
MS.gene86102.t1 AT4G34138 28.544 515 282 18 8 479 9 480 1.19e-44 163
MS.gene86102.t1 AT5G17040 29.032 310 207 3 170 478 41 338 1.25e-44 160
MS.gene86102.t1 AT4G36770 27.824 478 279 14 10 458 4 444 1.71e-43 159
MS.gene86102.t1 AT5G03490 29.485 485 290 18 6 476 15 461 9.51e-43 157
MS.gene86102.t1 AT4G34135 27.767 497 310 15 6 476 7 480 1.20e-42 158
MS.gene86102.t1 AT1G73880 28.485 495 304 16 3 478 4 467 1.83e-41 154
MS.gene86102.t1 AT3G21790 26.506 498 309 12 12 477 6 478 3.09e-41 154
MS.gene86102.t1 AT4G15280 27.309 498 302 13 12 478 6 474 9.75e-41 152
MS.gene86102.t1 AT4G15280 27.309 498 302 13 12 478 38 506 2.10e-40 152
MS.gene86102.t1 AT3G22250 25.732 478 280 13 7 450 5 441 7.77e-40 149
MS.gene86102.t1 AT2G16890 27.533 454 263 17 10 435 9 424 1.49e-39 148
MS.gene86102.t1 AT1G51210 28.728 456 273 17 8 452 18 432 7.55e-39 146
MS.gene86102.t1 AT5G37950 29.708 377 225 14 25 395 1 343 9.41e-39 144
MS.gene86102.t1 AT3G21800 25.852 499 307 13 12 477 7 475 1.50e-38 146
MS.gene86102.t1 AT3G21780 27.016 496 307 14 8 477 2 468 3.60e-38 145
MS.gene86102.t1 AT2G18560 28.496 379 214 13 120 470 20 369 4.18e-38 143
MS.gene86102.t1 AT5G37950 30.053 376 219 14 25 395 1 337 9.34e-38 141
MS.gene86102.t1 AT2G18570 25.355 493 302 19 8 470 3 459 3.11e-37 142
MS.gene86102.t1 AT2G29740 26.220 492 316 14 6 474 4 471 8.57e-37 141
MS.gene86102.t1 AT2G29710 25.600 500 306 18 7 478 2 463 2.79e-36 140
MS.gene86102.t1 AT3G21760 25.097 518 293 14 12 477 6 480 6.75e-36 139
MS.gene86102.t1 AT4G15260 26.862 376 229 7 127 478 2 355 1.02e-35 136
MS.gene86102.t1 AT2G29730 29.455 275 173 7 214 478 200 463 1.04e-35 138
MS.gene86102.t1 AT3G21750 25.737 509 299 14 8 478 2 469 6.56e-35 136
MS.gene86102.t1 AT2G29750 24.950 497 311 15 12 478 10 474 8.46e-35 136
MS.gene86102.t1 AT5G65550 27.542 472 292 16 8 461 7 446 1.24e-34 135
MS.gene86102.t1 AT5G49690 25.474 475 289 18 10 461 10 442 2.18e-34 134
MS.gene86102.t1 AT1G07250 30.545 275 167 6 217 478 210 473 2.53e-34 134
MS.gene86102.t1 AT1G07260 28.261 276 173 6 217 478 208 472 2.43e-33 132
MS.gene86102.t1 AT1G07240 29.032 279 172 7 216 478 208 476 7.00e-33 130
MS.gene86102.t1 AT5G12890 27.606 518 303 21 1 480 1 484 3.12e-28 117
MS.gene86102.t1 AT4G01070 28.824 340 191 11 6 332 4 305 8.70e-24 102
MS.gene86102.t1 AT2G22590 26.273 491 279 16 1 453 1 446 6.84e-23 101
MS.gene86102.t1 AT1G06000 28.622 283 173 10 215 479 164 435 1.09e-22 100
MS.gene86102.t1 AT4G34135 26.225 347 209 12 6 332 7 326 2.21e-18 86.7
MS.gene86102.t1 AT5G54010 26.180 466 279 22 8 459 4 418 1.37e-17 85.5
MS.gene86102.t1 AT5G53990 26.790 433 247 18 10 428 6 382 6.30e-17 83.6
MS.gene86102.t1 AT4G27570 23.788 433 269 15 8 428 5 388 9.91e-17 82.8
MS.gene86102.t1 AT1G64910 26.498 434 247 19 10 428 6 382 3.34e-16 81.3
MS.gene86102.t1 AT4G09500 28.652 178 115 5 287 454 243 418 8.04e-16 80.1
MS.gene86102.t1 AT4G09500 28.652 178 115 5 287 454 218 393 8.13e-16 79.7
MS.gene86102.t1 AT3G29630 23.711 485 307 17 8 477 4 440 8.94e-16 79.7
MS.gene86102.t1 AT4G27560 25.173 433 263 20 8 428 5 388 8.96e-16 79.7
MS.gene86102.t1 AT2G22930 26.820 261 159 8 229 477 197 437 1.10e-15 79.7
MS.gene86102.t1 AT2G23210 26.490 302 184 11 1 297 1 269 1.94e-14 74.3
MS.gene86102.t1 AT3G29630 28.358 201 127 5 288 477 220 414 2.98e-14 75.1
MS.gene86102.t1 AT5G54060 29.915 234 139 8 228 448 219 440 1.20e-13 73.6
MS.gene86102.t1 AT1G50580 29.861 144 95 3 287 428 244 383 3.27e-12 68.9
MS.gene86102.t1 AT1G64920 28.191 188 107 6 287 454 243 422 5.25e-12 68.2

Find 104 sgRNAs with CRISPR-Local

Find 219 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATCTAACAAATGGATATT+TGG 0.229612 6.3:-8766457 MS.gene86102:CDS
ATTGATCAATTTGTGGAGTT+TGG 0.264442 6.3:+8766190 None:intergenic
AACATGCACTGGCTGGAAAA+AGG 0.279272 6.3:+8767858 None:intergenic
TTACGTTCCTTTGTAGAAAA+AGG 0.284079 6.3:-8767815 MS.gene86102:CDS
GCAAAACTTCTTCACCTTAG+AGG 0.292624 6.3:-8768205 MS.gene86102:CDS
ATTGATCAATTGGATTCTTT+AGG 0.307043 6.3:-8766177 MS.gene86102:CDS
TTTCCTTCTCTTTACACCTT+TGG 0.312627 6.3:-8766234 MS.gene86102:CDS
ATTCTTTAGGTTCCAACATA+TGG 0.312880 6.3:-8766164 MS.gene86102:CDS
ATTTGTAATGAATGGGAGAT+TGG 0.315917 6.3:-8765751 MS.gene86102:CDS
GGAGTTTGGTTTAATAATAA+AGG 0.327599 6.3:+8766204 None:intergenic
AACTCCACAAATTGATCAAT+TGG 0.329261 6.3:-8766187 MS.gene86102:CDS
ACTAAAGTAGATTGGATTCC+AGG 0.336076 6.3:-8766432 MS.gene86102:CDS
AGGACATTGTTGACTATATC+AGG 0.339946 6.3:-8766389 MS.gene86102:CDS
GTTAGAGTTTGCTTGGGGTT+TGG 0.344193 6.3:-8766040 MS.gene86102:CDS
CAAATAAGTCTACAGTTTGT+TGG 0.355700 6.3:+8765769 None:intergenic
CTTGTAAGAAGTTCACAAAA+AGG 0.373692 6.3:+8767986 None:intergenic
TCAGAAAATAAGCAAGTAAC+TGG 0.379190 6.3:+8767938 None:intergenic
ATTTGGAAACTAAAGTAGAT+TGG 0.379465 6.3:-8766440 MS.gene86102:CDS
AGGTTATGTAAAAGCCTCTA+AGG 0.385615 6.3:+8768191 None:intergenic
GGATTTATATGTCCTTGAAA+TGG 0.391790 6.3:+8768241 None:intergenic
TCTATTGGTGTTAGACCATC+TGG 0.392456 6.3:+8768076 None:intergenic
TCAGTTGTTTATGTGAATTT+CGG 0.393015 6.3:-8766093 MS.gene86102:CDS
GTAGACTTATTTGTAATGAA+TGG 0.401455 6.3:-8765759 MS.gene86102:CDS
GCGGACACCAACTCACTATT+AGG 0.411800 6.3:+8765914 None:intergenic
AGAGGTGCAAATTCCTTAGA+TGG 0.415236 6.3:-8768127 MS.gene86102:CDS
GTTAATGAAATTTCAGATAG+AGG 0.417787 6.3:-8765937 MS.gene86102:CDS
AAAACCAGGGATACCATCTA+AGG 0.418415 6.3:+8768114 None:intergenic
TTCACATAAACAACTGATCT+TGG 0.421035 6.3:+8766099 None:intergenic
GAATGTAAAGAGAGAGGAGG+TGG 0.424697 6.3:-8765713 MS.gene86102:CDS
AAGTCTAACATAAAATCATT+TGG 0.425125 6.3:+8766357 None:intergenic
TTGATTCCAGCTCCATTTCA+AGG 0.427559 6.3:-8768253 MS.gene86102:CDS
GGTATCTTCTTTCCATATGT+TGG 0.428372 6.3:+8766152 None:intergenic
ACATCACCATCACCTTCTAT+TGG 0.429732 6.3:+8768061 None:intergenic
GAAACTGTTAGAGTTTGCTT+GGG 0.433505 6.3:-8766046 MS.gene86102:CDS
AGAAACTGTTAGAGTTTGCT+TGG 0.438481 6.3:-8766047 MS.gene86102:CDS
TAGACTTATTTGTAATGAAT+GGG 0.441983 6.3:-8765758 MS.gene86102:CDS
TGGTTTAATAATAAAGGTAA+AGG 0.452564 6.3:+8766210 None:intergenic
GATGAGAGTTATCTAACAAA+TGG 0.452799 6.3:-8766465 MS.gene86102:CDS
GGTTTAATAATAAAGGTAAA+GGG 0.454554 6.3:+8766211 None:intergenic
GAATCCAATTGATCAATTTG+TGG 0.457976 6.3:+8766183 None:intergenic
GAGCCACCAGTGACAAGATC+AGG 0.460149 6.3:+8765982 None:intergenic
TCTCTTCAGTCATAACTGTA+AGG 0.463036 6.3:+8766067 None:intergenic
AGGAAAGAAGATGAGGCAAA+AGG 0.473475 6.3:-8765656 MS.gene86102:CDS
TTTGTAATGAATGGGAGATT+GGG 0.482130 6.3:-8765750 MS.gene86102:CDS
TGGTGTTAGACCATCTGGTA+TGG 0.484791 6.3:+8768081 None:intergenic
AACAACTGATCTTGGTACCT+TGG 0.486959 6.3:+8766107 None:intergenic
AATAACAAACATGCACTGGC+TGG 0.491580 6.3:+8767851 None:intergenic
GCGGAGGAGAACACGAGACC+TGG 0.500888 6.3:-8765613 MS.gene86102:CDS
AATTCCTTAGATGGTATCCC+TGG 0.502536 6.3:-8768118 MS.gene86102:CDS
TTAAATCATCCTTCAGTTGG+TGG 0.509343 6.3:-8765880 MS.gene86102:CDS
GATGGTCTAACACCAATAGA+AGG 0.509410 6.3:-8768073 MS.gene86102:CDS
ACCGAGTGTCTTGAATGGCT+TGG 0.512661 6.3:-8766132 MS.gene86102:CDS
ATATGTCCTTGAAATGGAGC+TGG 0.513623 6.3:+8768247 None:intergenic
ACTCAATAACAAACATGCAC+TGG 0.517110 6.3:+8767847 None:intergenic
GAAGCTTGTCAATGAATTGA+TGG 0.517372 6.3:-8765689 MS.gene86102:CDS
TCTTGAATGGCTTGGATCCA+AGG 0.523717 6.3:-8766124 MS.gene86102:CDS
CTGGAGTTCCAATGTTGTGT+TGG 0.524933 6.3:-8765810 MS.gene86102:CDS
AATAGTGAGTTGGTGTCCGC+AGG 0.527162 6.3:-8765911 MS.gene86102:CDS
ACCACTGAAAGCATATGTGC+TGG 0.528505 6.3:-8765829 MS.gene86102:CDS
ATTAGGCCTGATCTTGTCAC+TGG 0.532084 6.3:-8765988 MS.gene86102:CDS
TTCATGTATGAACAACCTCC+AGG 0.539287 6.3:+8765595 None:intergenic
TTGAGCTTTACTATACAAGC+TGG 0.547927 6.3:-8767908 MS.gene86102:CDS
GAACTTGGACAAATTGATCA+AGG 0.549138 6.3:-8765575 MS.gene86102:CDS
TCTTATAGATTGAGCAAGAG+AGG 0.551944 6.3:+8768024 None:intergenic
GCAAGTAACTGGTGGAACAT+TGG 0.552903 6.3:+8767949 None:intergenic
CGAGTTGAAGAAGAAGGCGG+AGG 0.561557 6.3:-8765629 MS.gene86102:CDS
AGGCCTGATCTTGTCACTGG+TGG 0.562973 6.3:-8765985 MS.gene86102:CDS
GGGCCAAAGGTGTAAAGAGA+AGG 0.565444 6.3:+8766231 None:intergenic
GGTGGATTCTTGACTCATTG+TGG 0.565798 6.3:-8765862 MS.gene86102:CDS
AGGTTGTTCATACATGAACT+TGG 0.567337 6.3:-8765590 MS.gene86102:CDS
AGCTTTGAAACCATACCAGA+TGG 0.567356 6.3:-8768091 MS.gene86102:CDS
CTTATAGATTGAGCAAGAGA+GGG 0.567769 6.3:+8768025 None:intergenic
AAGATACCGAGTGTCTTGAA+TGG 0.570424 6.3:-8766137 MS.gene86102:CDS
GAAAATAAGCAAGTAACTGG+TGG 0.570636 6.3:+8767941 None:intergenic
GGCAATCGAGTTGAAGAAGA+AGG 0.570682 6.3:-8765635 MS.gene86102:CDS
GTAAAGAGAAGGAAACATAG+AGG 0.571836 6.3:+8766242 None:intergenic
GATTCTTGACTCATTGTGGA+TGG 0.573721 6.3:-8765858 MS.gene86102:CDS
TAATGAATGGGAGATTGGGA+TGG 0.580439 6.3:-8765746 MS.gene86102:CDS
TGATACGAATGTAAAGAGAG+AGG 0.582082 6.3:-8765719 MS.gene86102:CDS
TGATTTAAAACTTGCTCCTG+CGG 0.586588 6.3:+8765895 None:intergenic
AAAGGTCTCACGCCACTCAA+AGG 0.587766 6.3:-8767797 MS.gene86102:intron
TAATAAAGGTAAAGGGCCAA+AGG 0.596160 6.3:+8766218 None:intergenic
GTTAGACTTTGTAATTGATG+TGG 0.596354 6.3:-8766343 MS.gene86102:CDS
CTTAACTTAGTACCTTTGAG+TGG 0.597041 6.3:+8767785 None:intergenic
TCCAAGCCATTCAAGACACT+CGG 0.597867 6.3:+8766131 None:intergenic
ATTGTATTCAGTGTTGACAA+AGG 0.603382 6.3:+8768171 None:intergenic
ATGGTTTCAAAGCTAAAACC+AGG 0.604560 6.3:+8768100 None:intergenic
ATAGAGGCCTAATAGTGAGT+TGG 0.607238 6.3:-8765921 MS.gene86102:CDS
CTTGTCAATGAATTGATGGT+GGG 0.608074 6.3:-8765685 MS.gene86102:CDS
AAACGTTTGCTCAAATCAAG+AGG 0.611549 6.3:-8768145 MS.gene86102:CDS
GGGAGAAAGGAAAGAAGATG+AGG 0.617307 6.3:-8765663 MS.gene86102:CDS
GCTGGAATCAACACAGCATG+TGG 0.617848 6.3:+8768265 None:intergenic
TACGAATGTAAAGAGAGAGG+AGG 0.622959 6.3:-8765716 MS.gene86102:CDS
TCCAGCACATATGCTTTCAG+TGG 0.624115 6.3:+8765828 None:intergenic
GTCAAGAATCCACCAACTGA+AGG 0.638437 6.3:+8765871 None:intergenic
AAACTGTTAGAGTTTGCTTG+GGG 0.652785 6.3:-8766045 MS.gene86102:CDS
CTAACACCAATAGAAGGTGA+TGG 0.660471 6.3:-8768067 MS.gene86102:CDS
TGGTTTCAAAGCTAAAACCA+GGG 0.660700 6.3:+8768101 None:intergenic
GCTTGTCAATGAATTGATGG+TGG 0.664053 6.3:-8765686 MS.gene86102:CDS
TGTCAATGAATTGATGGTGG+GGG 0.672527 6.3:-8765683 MS.gene86102:CDS
AATCGAGTTGAAGAAGAAGG+CGG 0.693405 6.3:-8765632 MS.gene86102:CDS
TTGTCAATGAATTGATGGTG+GGG 0.702295 6.3:-8765684 MS.gene86102:CDS
GAGGAGAACACGAGACCTGG+AGG 0.702713 6.3:-8765610 MS.gene86102:CDS
CTTGGACAAATTGATCAAGG+AGG 0.753709 6.3:-8765572 MS.gene86102:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATAAGTTCAAAATTT+GGG + chr6.3:8767278-8767297 None:intergenic 10.0%
!!! AAATTTTGAACTTATTTTTT+CGG - chr6.3:8767278-8767297 MS.gene86102:intron 10.0%
!!! ATACATGTATTTTTTTTTTA+GGG - chr6.3:8766975-8766994 MS.gene86102:intron 10.0%
!!! ATATACATTTTAATTGAAAA+AGG + chr6.3:8767195-8767214 None:intergenic 10.0%
!!! TATACATGTATTTTTTTTTT+AGG - chr6.3:8766974-8766993 MS.gene86102:intron 10.0%
!!! TTTTATATACTTATTAGTTA+GGG + chr6.3:8767082-8767101 None:intergenic 10.0%
!!! TTTTTATATACTTATTAGTT+AGG + chr6.3:8767083-8767102 None:intergenic 10.0%
!!! TTTTTCAATTAAAATGTATA+TGG - chr6.3:8767194-8767213 MS.gene86102:intron 10.0%
!! GAAAAAATAAGTTCAAAATT+TGG + chr6.3:8767279-8767298 None:intergenic 15.0%
!!! AATAAGAGTTTTTAATTTGA+CGG + chr6.3:8766834-8766853 None:intergenic 15.0%
!!! AATTTTGAACTTATTTTTTC+GGG - chr6.3:8767279-8767298 MS.gene86102:intron 15.0%
!!! ATTAGGTAAAAAGTATATTA+GGG + chr6.3:8767230-8767249 None:intergenic 15.0%
!! AAGTCTAACATAAAATCATT+TGG + chr6.3:8767493-8767512 None:intergenic 20.0%
!! CAAAAAAGGTTTATTACAAT+TGG + chr6.3:8767833-8767852 None:intergenic 20.0%
!! GGTTTAATAATAAAGGTAAA+GGG + chr6.3:8767639-8767658 None:intergenic 20.0%
!! TAGACTTATTTGTAATGAAT+GGG - chr6.3:8768089-8768108 MS.gene86102:CDS 20.0%
!! TATAAAATTAGGAGTTCATT+AGG + chr6.3:8767247-8767266 None:intergenic 20.0%
!! TGGTTTAATAATAAAGGTAA+AGG + chr6.3:8767640-8767659 None:intergenic 20.0%
!! TTATCTAACAAATGGATATT+TGG - chr6.3:8767390-8767409 MS.gene86102:intron 20.0%
!!! ACTCCTAATTTTATATTTTG+CGG - chr6.3:8767252-8767271 MS.gene86102:intron 20.0%
!!! ATTGTAATAAACCTTTTTTG+TGG - chr6.3:8767833-8767852 MS.gene86102:CDS 20.0%
!!! CATTAGGTAAAAAGTATATT+AGG + chr6.3:8767231-8767250 None:intergenic 20.0%
!!! GAAAATTATTTTCACACTTT+AGG + chr6.3:8767117-8767136 None:intergenic 20.0%
!!! TCTAAAGTAAAACATATGAT+TGG + chr6.3:8766187-8766206 None:intergenic 20.0%
!!! TGTGAAAATAATTTTCTTGA+AGG - chr6.3:8767121-8767140 MS.gene86102:intron 20.0%
! AAGTTAATAGCTTGATTACA+TGG + chr6.3:8767344-8767363 None:intergenic 25.0%
! ATTGATCAATTGGATTCTTT+AGG - chr6.3:8767670-8767689 MS.gene86102:intron 25.0%
! ATTTGGAAACTAAAGTAGAT+TGG - chr6.3:8767407-8767426 MS.gene86102:intron 25.0%
! GAAAGAAACATACATGTATA+AGG + chr6.3:8766944-8766963 None:intergenic 25.0%
! GAACTAAAAAATTGTATTGG+AGG - chr6.3:8766515-8766534 MS.gene86102:intron 25.0%
! GAGGAACTAAAAAATTGTAT+TGG - chr6.3:8766512-8766531 MS.gene86102:intron 25.0%
! GTAGACTTATTTGTAATGAA+TGG - chr6.3:8768088-8768107 MS.gene86102:CDS 25.0%
! GTTAATGAAATTTCAGATAG+AGG - chr6.3:8767910-8767929 MS.gene86102:CDS 25.0%
! TAAAAAATTGTATTGGAGGA+GGG - chr6.3:8766519-8766538 MS.gene86102:intron 25.0%
! TAGAAGAAATAGAGGAAAAT+GGG - chr6.3:8766434-8766453 MS.gene86102:CDS 25.0%
! TCAGTTGTTTATGTGAATTT+CGG - chr6.3:8767754-8767773 MS.gene86102:intron 25.0%
!! GGAGTTTGGTTTAATAATAA+AGG + chr6.3:8767646-8767665 None:intergenic 25.0%
!! GTGATAGTTTTTATCATGTT+AGG - chr6.3:8767143-8767162 MS.gene86102:intron 25.0%
!!! AGTTTTATCGATCAAATTTG+TGG + chr6.3:8766870-8766889 None:intergenic 25.0%
AACTCCACAAATTGATCAAT+TGG - chr6.3:8767660-8767679 MS.gene86102:intron 30.0%
ATGTATGTATGACCTTCAAA+GGG - chr6.3:8767010-8767029 MS.gene86102:intron 30.0%
ATTGATCAATTTGTGGAGTT+TGG + chr6.3:8767660-8767679 None:intergenic 30.0%
ATTTGTAATGAATGGGAGAT+TGG - chr6.3:8768096-8768115 MS.gene86102:CDS 30.0%
CAAATAAGTCTACAGTTTGT+TGG + chr6.3:8768081-8768100 None:intergenic 30.0%
CTAAAAAATTGTATTGGAGG+AGG - chr6.3:8766518-8766537 MS.gene86102:intron 30.0%
CTGGAAAAAGGATAACATTT+GGG + chr6.3:8765980-8765999 None:intergenic 30.0%
CTTGTAAGAAGTTCACAAAA+AGG + chr6.3:8765864-8765883 None:intergenic 30.0%
GAAGTTCACAAAAAGGTTTA+AGG + chr6.3:8765857-8765876 None:intergenic 30.0%
GAATCCAATTGATCAATTTG+TGG + chr6.3:8767667-8767686 None:intergenic 30.0%
GATGAGAGTTATCTAACAAA+TGG - chr6.3:8767382-8767401 MS.gene86102:intron 30.0%
GGATTTATATGTCCTTGAAA+TGG + chr6.3:8765609-8765628 None:intergenic 30.0%
GTAGAAGAAATAGAGGAAAA+TGG - chr6.3:8766433-8766452 MS.gene86102:CDS 30.0%
GTTAGACTTTGTAATTGATG+TGG - chr6.3:8767504-8767523 MS.gene86102:intron 30.0%
TCAGAAAATAAGCAAGTAAC+TGG + chr6.3:8765912-8765931 None:intergenic 30.0%
TTACGTTCCTTTGTAGAAAA+AGG - chr6.3:8766032-8766051 MS.gene86102:CDS 30.0%
TTATATCGAGAGTTACTCTT+AGG + chr6.3:8766762-8766781 None:intergenic 30.0%
TTCACATAAACAACTGATCT+TGG + chr6.3:8767751-8767770 None:intergenic 30.0%
TTCCAGGTTTGAAAAACTTT+CGG - chr6.3:8767431-8767450 MS.gene86102:intron 30.0%
TTTATCGATCAAATTTGTGG+AGG + chr6.3:8766867-8766886 None:intergenic 30.0%
TTTGAAAAACTTTCGGTTGA+AGG - chr6.3:8767438-8767457 MS.gene86102:intron 30.0%
TTTGTAATGAATGGGAGATT+GGG - chr6.3:8768097-8768116 MS.gene86102:CDS 30.0%
! ATTCTTTAGGTTCCAACATA+TGG - chr6.3:8767683-8767702 MS.gene86102:intron 30.0%
!! AGTTTTGCTAGTTTGAACAA+TGG + chr6.3:8765630-8765649 None:intergenic 30.0%
!! ATTGTATTCAGTGTTGACAA+AGG + chr6.3:8765679-8765698 None:intergenic 30.0%
!! GTTTTAAATCATCCTTCAGT+TGG - chr6.3:8767964-8767983 MS.gene86102:CDS 30.0%
!!! AACCTTTTTTGTGGATCATT+AGG - chr6.3:8767842-8767861 MS.gene86102:CDS 30.0%
!!! TTTTTTAGTTCCTCCAAATG+AGG + chr6.3:8766506-8766525 None:intergenic 30.0%
AAAAATGGCCAACACAACAT+TGG + chr6.3:8768048-8768067 None:intergenic 35.0%
AAACGTTTGCTCAAATCAAG+AGG - chr6.3:8765702-8765721 MS.gene86102:CDS 35.0%
AAGGAAAGGAAAGACTTTGA+GGG + chr6.3:8766716-8766735 None:intergenic 35.0%
AATACAAAACCCTCCTCATT+TGG - chr6.3:8766490-8766509 MS.gene86102:intron 35.0%
ACTAAAGTAGATTGGATTCC+AGG - chr6.3:8767415-8767434 MS.gene86102:intron 35.0%
ACTCAATAACAAACATGCAC+TGG + chr6.3:8766003-8766022 None:intergenic 35.0%
AGAAATAGAGGAAAATGGGA+AGG - chr6.3:8766438-8766457 MS.gene86102:CDS 35.0%
AGGTTATGTAAAAGCCTCTA+AGG + chr6.3:8765659-8765678 None:intergenic 35.0%
AGGTTGTTCATACATGAACT+TGG - chr6.3:8768257-8768276 MS.gene86102:CDS 35.0%
ATGGTTTCAAAGCTAAAACC+AGG + chr6.3:8765750-8765769 None:intergenic 35.0%
CATGTATGTATGACCTTCAA+AGG - chr6.3:8767009-8767028 MS.gene86102:intron 35.0%
CTTAACTTAGTACCTTTGAG+TGG + chr6.3:8766065-8766084 None:intergenic 35.0%
CTTATAGATTGAGCAAGAGA+GGG + chr6.3:8765825-8765844 None:intergenic 35.0%
GAAAATAAGCAAGTAACTGG+TGG + chr6.3:8765909-8765928 None:intergenic 35.0%
GAACTTGGACAAATTGATCA+AGG - chr6.3:8768272-8768291 MS.gene86102:CDS 35.0%
GAAGCTTGTCAATGAATTGA+TGG - chr6.3:8768158-8768177 MS.gene86102:CDS 35.0%
GCTGGAAAAAGGATAACATT+TGG + chr6.3:8765981-8766000 None:intergenic 35.0%
GGGCCGCAAAATATAAAATT+AGG + chr6.3:8767258-8767277 None:intergenic 35.0%
GGTATCTTCTTTCCATATGT+TGG + chr6.3:8767698-8767717 None:intergenic 35.0%
GTAAAGAGAAGGAAACATAG+AGG + chr6.3:8767608-8767627 None:intergenic 35.0%
GTGATAATCAACTTACTCCA+AGG - chr6.3:8766360-8766379 MS.gene86102:CDS 35.0%
TAATAAAGGTAAAGGGCCAA+AGG + chr6.3:8767632-8767651 None:intergenic 35.0%
TCTCTTCAGTCATAACTGTA+AGG + chr6.3:8767783-8767802 None:intergenic 35.0%
TCTTATAGATTGAGCAAGAG+AGG + chr6.3:8765826-8765845 None:intergenic 35.0%
TGAGCAAGTAGAAGAAATAG+AGG - chr6.3:8766426-8766445 MS.gene86102:CDS 35.0%
TGATACGAATGTAAAGAGAG+AGG - chr6.3:8768128-8768147 MS.gene86102:CDS 35.0%
TGGTTTCAAAGCTAAAACCA+GGG + chr6.3:8765749-8765768 None:intergenic 35.0%
TTAAATCATCCTTCAGTTGG+TGG - chr6.3:8767967-8767986 MS.gene86102:CDS 35.0%
TTGAGCTTTACTATACAAGC+TGG - chr6.3:8765939-8765958 MS.gene86102:CDS 35.0%
TTTCCTTCTCTTTACACCTT+TGG - chr6.3:8767613-8767632 MS.gene86102:intron 35.0%
! AAACTGTTAGAGTTTGCTTG+GGG - chr6.3:8767802-8767821 MS.gene86102:CDS 35.0%
! AGAAACTGTTAGAGTTTGCT+TGG - chr6.3:8767800-8767819 MS.gene86102:CDS 35.0%
! AGGACATTGTTGACTATATC+AGG - chr6.3:8767458-8767477 MS.gene86102:intron 35.0%
! CTTGTCAATGAATTGATGGT+GGG - chr6.3:8768162-8768181 MS.gene86102:CDS 35.0%
! GAAACTGTTAGAGTTTGCTT+GGG - chr6.3:8767801-8767820 MS.gene86102:CDS 35.0%
! TGATTTAAAACTTGCTCCTG+CGG + chr6.3:8767955-8767974 None:intergenic 35.0%
!! AACCGAAAGTTTTTCAAACC+TGG + chr6.3:8767436-8767455 None:intergenic 35.0%
!! AGTTACTCTTAGGCTTTGTT+TGG + chr6.3:8766752-8766771 None:intergenic 35.0%
!! GTTACTCTTAGGCTTTGTTT+GGG + chr6.3:8766751-8766770 None:intergenic 35.0%
!! TGGCTCAAAAGTTTTGTCAT+CGG - chr6.3:8767882-8767901 MS.gene86102:CDS 35.0%
!! TTGTCAATGAATTGATGGTG+GGG - chr6.3:8768163-8768182 MS.gene86102:CDS 35.0%
AAAACCAGGGATACCATCTA+AGG + chr6.3:8765736-8765755 None:intergenic 40.0%
AACAACTGATCTTGGTACCT+TGG + chr6.3:8767743-8767762 None:intergenic 40.0%
AAGATACCGAGTGTCTTGAA+TGG - chr6.3:8767710-8767729 MS.gene86102:intron 40.0%
AATAGAGGAAAATGGGAAGG+AGG - chr6.3:8766441-8766460 MS.gene86102:CDS 40.0%
AATTCCTTAGATGGTATCCC+TGG - chr6.3:8765729-8765748 MS.gene86102:CDS 40.0%
ACATCACCATCACCTTCTAT+TGG + chr6.3:8765789-8765808 None:intergenic 40.0%
AGGAAAGAAGATGAGGCAAA+AGG - chr6.3:8768191-8768210 MS.gene86102:CDS 40.0%
AGGAAAGGAAAGACTTTGAG+GGG + chr6.3:8766715-8766734 None:intergenic 40.0%
ATAGAGGAAAATGGGAAGGA+GGG - chr6.3:8766442-8766461 MS.gene86102:CDS 40.0%
ATAGAGGCCTAATAGTGAGT+TGG - chr6.3:8767926-8767945 MS.gene86102:CDS 40.0%
ATATGTCCTTGAAATGGAGC+TGG + chr6.3:8765603-8765622 None:intergenic 40.0%
CTAACACCAATAGAAGGTGA+TGG - chr6.3:8765780-8765799 MS.gene86102:CDS 40.0%
CTTGGACAAATTGATCAAGG+AGG - chr6.3:8768275-8768294 MS.gene86102:CDS 40.0%
GAAGGAAAGGAAAGACTTTG+AGG + chr6.3:8766717-8766736 None:intergenic 40.0%
GATGGTCTAACACCAATAGA+AGG - chr6.3:8765774-8765793 MS.gene86102:CDS 40.0%
GATTCTTGACTCATTGTGGA+TGG - chr6.3:8767989-8768008 MS.gene86102:CDS 40.0%
GCAAAACTTCTTCACCTTAG+AGG - chr6.3:8765642-8765661 MS.gene86102:CDS 40.0%
GCTTGTCAATGAATTGATGG+TGG - chr6.3:8768161-8768180 MS.gene86102:CDS 40.0%
GGCCTAATGATCCACAAAAA+AGG + chr6.3:8767847-8767866 None:intergenic 40.0%
GTTGGCTGATCAGTGAAAAA+TGG + chr6.3:8768063-8768082 None:intergenic 40.0%
TAATGAATGGGAGATTGGGA+TGG - chr6.3:8768101-8768120 MS.gene86102:CDS 40.0%
TACGAATGTAAAGAGAGAGG+AGG - chr6.3:8768131-8768150 MS.gene86102:CDS 40.0%
TTAGTTAGGGCCCAAACTAT+AGG + chr6.3:8767069-8767088 None:intergenic 40.0%
TTAGTTCCTCCAAATGAGGA+GGG + chr6.3:8766502-8766521 None:intergenic 40.0%
TTCATGTATGAACAACCTCC+AGG + chr6.3:8768255-8768274 None:intergenic 40.0%
TTGATTCCAGCTCCATTTCA+AGG - chr6.3:8765594-8765613 MS.gene86102:CDS 40.0%
! AATAACAAACATGCACTGGC+TGG + chr6.3:8765999-8766018 None:intergenic 40.0%
! AGAGGTGCAAATTCCTTAGA+TGG - chr6.3:8765720-8765739 MS.gene86102:CDS 40.0%
! ATTGTATTGGAGGAGGGTTT+TGG - chr6.3:8766525-8766544 MS.gene86102:intron 40.0%
! CGTGAGACCTTTTTCTACAA+AGG + chr6.3:8766042-8766061 None:intergenic 40.0%
! TTGTATTGGAGGAGGGTTTT+GGG - chr6.3:8766526-8766545 MS.gene86102:intron 40.0%
! TTTAGTTCCTCCAAATGAGG+AGG + chr6.3:8766503-8766522 None:intergenic 40.0%
!! AATCGAGTTGAAGAAGAAGG+CGG - chr6.3:8768215-8768234 MS.gene86102:CDS 40.0%
!! AGCTTTGAAACCATACCAGA+TGG - chr6.3:8765756-8765775 MS.gene86102:CDS 40.0%
!! TCTATTGGTGTTAGACCATC+TGG + chr6.3:8765774-8765793 None:intergenic 40.0%
!! TGTCAATGAATTGATGGTGG+GGG - chr6.3:8768164-8768183 MS.gene86102:CDS 40.0%
!! TTAGGCTTTGTTTGGGAGTT+TGG + chr6.3:8766744-8766763 None:intergenic 40.0%
!!! GAACTTATTTTTTCGGGCCT+AGG - chr6.3:8767285-8767304 MS.gene86102:intron 40.0%
!!! TTATTTTTTCGGGCCTAGGA+CGG - chr6.3:8767289-8767308 MS.gene86102:intron 40.0%
AAAATGGGAAGGAGGGCTTT+GGG - chr6.3:8766449-8766468 MS.gene86102:CDS 45.0%
ACAAAACCCTCCTCATTTGG+AGG - chr6.3:8766493-8766512 MS.gene86102:intron 45.0%
ATTAGGCCTGATCTTGTCAC+TGG - chr6.3:8767859-8767878 MS.gene86102:CDS 45.0%
CAAACTCGCAAACAAAGCCT+TGG + chr6.3:8766380-8766399 None:intergenic 45.0%
CTGGAGTTCCAATGTTGTGT+TGG - chr6.3:8768037-8768056 MS.gene86102:CDS 45.0%
GAATGTAAAGAGAGAGGAGG+TGG - chr6.3:8768134-8768153 MS.gene86102:CDS 45.0%
GCAAGTAACTGGTGGAACAT+TGG + chr6.3:8765901-8765920 None:intergenic 45.0%
GGGAGAAAGGAAAGAAGATG+AGG - chr6.3:8768184-8768203 MS.gene86102:CDS 45.0%
GTCAAGAATCCACCAACTGA+AGG + chr6.3:8767979-8767998 None:intergenic 45.0%
TACGGGCGAACCTATAGTTT+GGG - chr6.3:8767056-8767075 MS.gene86102:intron 45.0%
TCCAAGCCATTCAAGACACT+CGG + chr6.3:8767719-8767738 None:intergenic 45.0%
TCCAGCACATATGCTTTCAG+TGG + chr6.3:8768022-8768041 None:intergenic 45.0%
TGATTACATGGCCGTATCTG+AGG + chr6.3:8767332-8767351 None:intergenic 45.0%
! ACCACTGAAAGCATATGTGC+TGG - chr6.3:8768018-8768037 MS.gene86102:CDS 45.0%
! CTTTGTTTGCGAGTTTGGAG+GGG - chr6.3:8766383-8766402 MS.gene86102:CDS 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG + chr6.3:8766739-8766758 None:intergenic 45.0%
! GGTGGATTCTTGACTCATTG+TGG - chr6.3:8767985-8768004 MS.gene86102:CDS 45.0%
! GTTAGAGTTTGCTTGGGGTT+TGG - chr6.3:8767807-8767826 MS.gene86102:CDS 45.0%
! TCTTGAATGGCTTGGATCCA+AGG - chr6.3:8767723-8767742 MS.gene86102:intron 45.0%
! TGGTGTTAGACCATCTGGTA+TGG + chr6.3:8765769-8765788 None:intergenic 45.0%
! TGTATTGGAGGAGGGTTTTG+GGG - chr6.3:8766527-8766546 MS.gene86102:intron 45.0%
!! AACATGCACTGGCTGGAAAA+AGG + chr6.3:8765992-8766011 None:intergenic 45.0%
!! CAAGGCTTTGTTTGCGAGTT+TGG - chr6.3:8766378-8766397 MS.gene86102:CDS 45.0%
!! GCTTTGTTTGCGAGTTTGGA+GGG - chr6.3:8766382-8766401 MS.gene86102:CDS 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG + chr6.3:8766740-8766759 None:intergenic 45.0%
!! GGCAATCGAGTTGAAGAAGA+AGG - chr6.3:8768212-8768231 MS.gene86102:CDS 45.0%
!! TATATATATATATATATACA+CGG + chr6.3:8766289-8766308 None:intergenic 5.0%
AAAGGTCTCACGCCACTCAA+AGG - chr6.3:8766050-8766069 MS.gene86102:CDS 50.0%
AAATGGGAAGGAGGGCTTTG+GGG - chr6.3:8766450-8766469 MS.gene86102:CDS 50.0%
ACCGAGTGTCTTGAATGGCT+TGG - chr6.3:8767715-8767734 MS.gene86102:intron 50.0%
AGGGGAAGGCTTGGGAAAAA+AGG - chr6.3:8766401-8766420 MS.gene86102:CDS 50.0%
CAAACTATAGGTTCGCCCGT+AGG + chr6.3:8767057-8767076 None:intergenic 50.0%
CTACGGGCGAACCTATAGTT+TGG - chr6.3:8767055-8767074 MS.gene86102:intron 50.0%
GAAAATGGGAAGGAGGGCTT+TGG - chr6.3:8766448-8766467 MS.gene86102:CDS 50.0%
GCGGACACCAACTCACTATT+AGG + chr6.3:8767936-8767955 None:intergenic 50.0%
GCTGGAATCAACACAGCATG+TGG + chr6.3:8765585-8765604 None:intergenic 50.0%
GGCCACCAGAATCTCAGAAA+CGG + chr6.3:8767036-8767055 None:intergenic 50.0%
TCTCAGAAACGGCCCTTTGA+AGG + chr6.3:8767025-8767044 None:intergenic 50.0%
! GGGCCAAAGGTGTAAAGAGA+AGG + chr6.3:8767619-8767638 None:intergenic 50.0%
! TCTGAGATTCTGGTGGCCTA+CGG - chr6.3:8767038-8767057 MS.gene86102:intron 50.0%
!! AAGGGCCGTTTCTGAGATTC+TGG - chr6.3:8767028-8767047 MS.gene86102:intron 50.0%
!! AATAGTGAGTTGGTGTCCGC+AGG - chr6.3:8767936-8767955 MS.gene86102:CDS 50.0%
!! GAATTGATGGTGGGGGAGAA+AGG - chr6.3:8768171-8768190 MS.gene86102:CDS 50.0%
!! GGCTTTGTTTGCGAGTTTGG+AGG - chr6.3:8766381-8766400 MS.gene86102:CDS 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG + chr6.3:8766741-8766760 None:intergenic 50.0%
!! GTATTGGAGGAGGGTTTTGG+GGG - chr6.3:8766528-8766547 MS.gene86102:intron 50.0%
!!! TATTGGAGGAGGGTTTTGGG+GGG - chr6.3:8766529-8766548 MS.gene86102:intron 50.0%
AGGCCTGATCTTGTCACTGG+TGG - chr6.3:8767862-8767881 MS.gene86102:CDS 55.0%
CTGAGATTCTGGTGGCCTAC+GGG - chr6.3:8767039-8767058 MS.gene86102:intron 55.0%
GAGCCACCAGTGACAAGATC+AGG + chr6.3:8767868-8767887 None:intergenic 55.0%
GAGTTTGGAGGGGAAGGCTT+GGG - chr6.3:8766393-8766412 MS.gene86102:CDS 55.0%
GGAGTTTGGAGGGGAAGGAA+AGG + chr6.3:8766730-8766749 None:intergenic 55.0%
GTTTGCGAGTTTGGAGGGGA+AGG - chr6.3:8766387-8766406 MS.gene86102:CDS 55.0%
GTTTGGGAGTTTGGAGGGGA+AGG + chr6.3:8766735-8766754 None:intergenic 55.0%
! AATGGGAAGGAGGGCTTTGG+GGG - chr6.3:8766451-8766470 MS.gene86102:CDS 55.0%
! ACATGGCCGTATCTGAGGCA+GGG + chr6.3:8767327-8767346 None:intergenic 55.0%
! CGAGTTGAAGAAGAAGGCGG+AGG - chr6.3:8768218-8768237 MS.gene86102:CDS 55.0%
! TACATGGCCGTATCTGAGGC+AGG + chr6.3:8767328-8767347 None:intergenic 55.0%
!! GGCCGTTTCTGAGATTCTGG+TGG - chr6.3:8767031-8767050 MS.gene86102:intron 55.0%
!!! ATTGGAGGAGGGTTTTGGGG+GGG - chr6.3:8766530-8766549 MS.gene86102:intron 55.0%
!!! GGTTTTGGGGGGGTTTTGGA+GGG - chr6.3:8766540-8766559 MS.gene86102:intron 55.0%
CGAGTTTGGAGGGGAAGGCT+TGG - chr6.3:8766392-8766411 MS.gene86102:CDS 60.0%
GAGGAGAACACGAGACCTGG+AGG - chr6.3:8768237-8768256 MS.gene86102:CDS 60.0%
TCCTCGCCCTGCCTCAGATA+CGG - chr6.3:8767318-8767337 MS.gene86102:intron 60.0%
! TATCTGAGGCAGGGCGAGGA+GGG + chr6.3:8767318-8767337 None:intergenic 60.0%
!! ATGGGAAGGAGGGCTTTGGG+GGG - chr6.3:8766452-8766471 MS.gene86102:CDS 60.0%
!!! GGAGGGTTTTGGGGGGGTTT+TGG - chr6.3:8766536-8766555 MS.gene86102:intron 60.0%
!!! GGGTTTTGGGGGGGTTTTGG+AGG - chr6.3:8766539-8766558 MS.gene86102:intron 60.0%
GCGGAGGAGAACACGAGACC+TGG - chr6.3:8768234-8768253 MS.gene86102:CDS 65.0%
! GTATCTGAGGCAGGGCGAGG+AGG + chr6.3:8767319-8767338 None:intergenic 65.0%
! GCCGTATCTGAGGCAGGGCG+AGG + chr6.3:8767322-8767341 None:intergenic 70.0%
GCGAGGAGGGCGACCGTCCT+AGG + chr6.3:8767305-8767324 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr6.3 gene 8765558 8768311 8765558 ID=MS.gene86102
chr6.3 mRNA 8765558 8768311 8765558 ID=MS.gene86102.t1;Parent=MS.gene86102
chr6.3 exon 8767798 8768311 8767798 ID=MS.gene86102.t1.exon1;Parent=MS.gene86102.t1
chr6.3 CDS 8767798 8768311 8767798 ID=cds.MS.gene86102.t1;Parent=MS.gene86102.t1
chr6.3 exon 8765558 8766486 8765558 ID=MS.gene86102.t1.exon2;Parent=MS.gene86102.t1
chr6.3 CDS 8765558 8766486 8765558 ID=cds.MS.gene86102.t1;Parent=MS.gene86102.t1
Gene Sequence

>MS.gene86102

ATGGGAAACTTTGCAAACAGAAAACCACATGCTGTGTTGATTCCAGCTCCATTTCAAGGACATATAAATCCATTGTTCAAACTAGCAAAACTTCTTCACCTTAGAGGCTTTTACATAACCTTTGTCAACACTGAATACAATCATAAACGTTTGCTCAAATCAAGAGGTGCAAATTCCTTAGATGGTATCCCTGGTTTTAGCTTTGAAACCATACCAGATGGTCTAACACCAATAGAAGGTGATGGTGATGTTAGTCAAGACATACCCTCTCTTGCTCAATCTATAAGAAAGAACTTCCTTAAACCTTTTTGTGAACTTCTTACAAGACTTAATCACTCTGCCAATGTTCCACCAGTTACTTGCTTATTTTCTGATTATTTTTTGAGCTTTACTATACAAGCTGGTGAAGAATTTGCAATCCCAAATGTTATCCTTTTTCCAGCCAGTGCATGTTTGTTATTGAGTATTCTTCACTTACGTTCCTTTGTAGAAAAAGGTCTCACGCCACTCAAAGGTACTAAGTTAAGTTTTTTTCATCACAAAGTATATATTTATAGAGAGATTAATTAATATTAACTTTGATACACTACTAGTGTAAAATGTTTTACAGTGTCAGCAAATCACAACCAATCATATGTTTTACTTTAGAAGTAGTTACGATTAAAGTTGATATTTTCTATGATCTGACAATTATGATTTATTGAAAATGTAAAAAATCTTTACATTGACCGTGTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTTCGTGTGTGTGATAATCAACTTACTCCAAGGCTTTGTTTGCGAGTTTGGAGGGGAAGGCTTGGGAAAAAAGGAATGAGCAAGTAGAAGAAATAGAGGAAAATGGGAAGGAGGGCTTTGGGGGGTTAACTTTTCTTCATAATACAAAACCCTCCTCATTTGGAGGAACTAAAAAATTGTATTGGAGGAGGGTTTTGGGGGGGTTTTGGAGGGTTAATAAGAATTCTTCAAATTTAATCTATGTTGTTATAATATTTTTAAAATTAAAAATAAAGTAATCATATGCATTAATTTATCACTCTCTAAAAAACTACTCTTTTAAAAAATTTGAAAAATTTCTCAATTTTTCTTCATATTTTACACCCCTCAAAGTCTTTCCTTTCCTTCCCCTCCAAACTCCCAAACAAAGCCTAAGAGTAACTCTCGATATAATTTCAGTTAATATATAGCTCAATGTAGACGCTAAATTTCAATAAAGCAACCGTCAAATTAAAAACTCTTATTGAATAGATGACCTCCACAAATTTGATCGATAAAACTTCAAAACTAAAATTTATGCTTCAATAAATGATTTCTATTCAATTTATAATACCTTATACATGTATGTTTCTTTCGAAAACAAAATATACATGTATTTTTTTTTTAGGGAACAAAATTTACATGTATGTATGACCTTCAAAGGGCCGTTTCTGAGATTCTGGTGGCCTACGGGCGAACCTATAGTTTGGGCCCTAACTAATAAGTATATAAAAAAAAATTGAATTCCTAAAGTGTGAAAATAATTTTCTTGAAGGTGATAGTTTTTATCATGTTAGGAAATGTACATTCAATTCTTGATATGTCCTTTTTCAATTAAAATGTATATGGTTTTAGCATTCCCTAATATACTTTTTACCTAATGAACTCCTAATTTTATATTTTGCGGCCCAAATTTTGAACTTATTTTTTCGGGCCTAGGACGGTCGCCCTCCTCGCCCTGCCTCAGATACGGCCATGTAATCAAGCTATTAACTTTGCTACTTTTGATATGCAGATGAGAGTTATCTAACAAATGGATATTTGGAAACTAAAGTAGATTGGATTCCAGGTTTGAAAAACTTTCGGTTGAAGGACATTGTTGACTATATCAGGACAACAGATCCAAATGATTTTATGTTAGACTTTGTAATTGATGTGGCTGATAAAGTTCATAAAAACTCTACTATTATTTTGAATACTTTCAATGAACTTGAGAGTGATGTAATAAATGCTCTCTCCTCTATGTTTCCTTCTCTTTACACCTTTGGCCCTTTACCTTTATTATTAAACCAAACTCCACAAATTGATCAATTGGATTCTTTAGGTTCCAACATATGGAAAGAAGATACCGAGTGTCTTGAATGGCTTGGATCCAAGGTACCAAGATCAGTTGTTTATGTGAATTTCGGCAGCCTTACAGTTATGACTGAAGAGAAACTGTTAGAGTTTGCTTGGGGTTTGGCCAATTGTAATAAACCTTTTTTGTGGATCATTAGGCCTGATCTTGTCACTGGTGGCTCAAAAGTTTTGTCATCGGAGTTTGTTAATGAAATTTCAGATAGAGGCCTAATAGTGAGTTGGTGTCCGCAGGAGCAAGTTTTAAATCATCCTTCAGTTGGTGGATTCTTGACTCATTGTGGATGGAACTCAACCACTGAAAGCATATGTGCTGGAGTTCCAATGTTGTGTTGGCCATTTTTCACTGATCAGCCAACAAACTGTAGACTTATTTGTAATGAATGGGAGATTGGGATGGAAATTGATACGAATGTAAAGAGAGAGGAGGTGGAGAAGCTTGTCAATGAATTGATGGTGGGGGAGAAAGGAAAGAAGATGAGGCAAAAGGCAATCGAGTTGAAGAAGAAGGCGGAGGAGAACACGAGACCTGGAGGTTGTTCATACATGAACTTGGACAAATTGATCAAGGAGGTGTTGCTTAAATAA

Protein sequence

>MS.gene86102.t1

MGNFANRKPHAVLIPAPFQGHINPLFKLAKLLHLRGFYITFVNTEYNHKRLLKSRGANSLDGIPGFSFETIPDGLTPIEGDGDVSQDIPSLAQSIRKNFLKPFCELLTRLNHSANVPPVTCLFSDYFLSFTIQAGEEFAIPNVILFPASACLLLSILHLRSFVEKGLTPLKDESYLTNGYLETKVDWIPGLKNFRLKDIVDYIRTTDPNDFMLDFVIDVADKVHKNSTIILNTFNELESDVINALSSMFPSLYTFGPLPLLLNQTPQIDQLDSLGSNIWKEDTECLEWLGSKVPRSVVYVNFGSLTVMTEEKLLEFAWGLANCNKPFLWIIRPDLVTGGSKVLSSEFVNEISDRGLIVSWCPQEQVLNHPSVGGFLTHCGWNSTTESICAGVPMLCWPFFTDQPTNCRLICNEWEIGMEIDTNVKREEVEKLVNELMVGEKGKKMRQKAIELKKKAEENTRPGGCSYMNLDKLIKEVLLK