AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene058365


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058365.t1 MTR_3g008010 87.552 482 13 1 1 435 1 482 0.0 844
MS.gene058365.t1 MTR_6g014290 78.838 482 55 1 1 435 1 482 0.0 771
MS.gene058365.t1 MTR_6g014250 75.519 482 71 1 1 435 1 482 0.0 724
MS.gene058365.t1 MTR_6g014220 72.083 480 87 1 1 433 1 480 0.0 701
MS.gene058365.t1 MTR_6g014170 70.747 482 78 2 1 435 1 466 0.0 671
MS.gene058365.t1 MTR_6g014040 64.609 486 120 4 1 435 1 485 0.0 631
MS.gene058365.t1 MTR_6g013440 65.361 485 116 4 1 434 1 484 0.0 629
MS.gene058365.t1 MTR_6g014020 64.124 485 123 3 1 435 1 484 0.0 628
MS.gene058365.t1 MTR_6g014186 68.326 442 127 3 4 433 1 441 0.0 625
MS.gene058365.t1 MTR_6g014310 66.186 485 112 4 1 434 1 484 0.0 614
MS.gene058365.t1 MTR_6g014050 66.667 486 110 4 1 435 1 485 0.0 608
MS.gene058365.t1 MTR_6g014270 63.017 484 126 4 4 435 1 483 0.0 605
MS.gene058365.t1 MTR_6g014200 64.167 480 121 3 4 433 1 479 0.0 595
MS.gene058365.t1 MTR_8g059425 63.299 485 125 5 1 435 1 482 0.0 595
MS.gene058365.t1 MTR_0288s0020 63.093 485 107 4 1 434 1 464 0.0 595
MS.gene058365.t1 MTR_6g014150 63.278 482 126 3 4 435 1 481 0.0 591
MS.gene058365.t1 MTR_6g013450 61.443 485 135 4 1 434 1 484 0.0 590
MS.gene058365.t1 MTR_6g014300 61.523 486 118 5 1 434 1 469 0.0 585
MS.gene058365.t1 MTR_6g011340 62.810 484 129 3 1 434 1 483 0.0 581
MS.gene058365.t1 MTR_6g014187 61.443 485 136 3 1 435 1 484 0.0 580
MS.gene058365.t1 MTR_6g013960 60.206 485 142 3 1 435 1 484 0.0 577
MS.gene058365.t1 MTR_6g013900 60.000 485 142 4 1 435 1 483 0.0 550
MS.gene058365.t1 MTR_6g013920 59.711 484 143 4 1 434 1 482 0.0 545
MS.gene058365.t1 MTR_5g058320 58.921 482 136 5 1 434 1 468 0.0 545
MS.gene058365.t1 MTR_7g011470 59.917 484 129 4 1 434 1 469 0.0 535
MS.gene058365.t1 MTR_6g013990 60.041 483 140 4 1 433 1 480 0.0 534
MS.gene058365.t1 MTR_6g014240 58.038 479 126 4 4 435 1 451 0.0 529
MS.gene058365.t1 MTR_7g011470 59.298 484 128 4 1 434 1 465 0.0 528
MS.gene058365.t1 MTR_6g013680 67.358 386 111 5 55 434 2 378 0.0 517
MS.gene058365.t1 MTR_5g464810 51.163 473 178 6 10 433 12 480 5.13e-166 476
MS.gene058365.t1 MTR_5g064240 51.163 473 178 6 10 433 12 480 5.13e-166 476
MS.gene058365.t1 MTR_5g464760 50.210 476 182 7 8 432 10 481 1.53e-161 464
MS.gene058365.t1 MTR_0036s0220 48.033 483 196 7 1 432 1 479 6.32e-159 457
MS.gene058365.t1 MTR_2g008210 48.632 475 189 5 8 432 9 478 1.51e-158 456
MS.gene058365.t1 MTR_8g007585 55.835 437 150 8 1 435 1 396 1.36e-151 436
MS.gene058365.t1 MTR_0199s0010 75.357 280 63 2 1 275 1 279 3.69e-151 430
MS.gene058365.t1 MTR_3g479490 43.789 475 216 4 6 431 2 474 4.77e-143 417
MS.gene058365.t1 MTR_8g043470 51.179 424 110 3 59 435 9 382 7.90e-139 403
MS.gene058365.t1 MTR_3g079480 43.552 473 216 4 8 431 19 489 1.03e-138 406
MS.gene058365.t1 MTR_3g479520 42.495 473 221 4 8 431 13 483 3.41e-136 400
MS.gene058365.t1 MTR_6g013435 64.856 313 101 5 128 434 1 310 2.02e-135 391
MS.gene058365.t1 MTR_4g094220 43.038 474 215 5 7 427 4 475 6.57e-134 394
MS.gene058365.t1 MTR_6g014160 50.790 443 164 9 1 435 1 397 4.31e-129 379
MS.gene058365.t1 MTR_3g479470 42.283 473 223 3 6 430 9 479 6.00e-126 374
MS.gene058365.t1 MTR_0477s0010 53.803 355 81 3 128 434 1 320 1.95e-119 351
MS.gene058365.t1 MTR_6g014190 57.877 292 75 2 191 435 1 291 2.77e-114 337
MS.gene058365.t1 MTR_6g014195 68.718 195 58 1 1 192 1 195 8.20e-94 281
MS.gene058365.t1 MTR_6g013890 56.432 241 72 6 170 397 21 241 2.68e-84 259
MS.gene058365.t1 MTR_6g014185 42.263 433 94 11 47 431 21 345 2.83e-83 260
MS.gene058365.t1 MTR_3g479610 41.801 311 132 3 170 431 3 313 1.26e-77 244
MS.gene058365.t1 MTR_0891s0010 37.931 290 131 3 191 431 1 290 2.02e-64 209
MS.gene058365.t1 MTR_0475s0020 74.242 132 30 2 1 128 1 132 4.47e-61 197
MS.gene058365.t1 MTR_3g069710 29.536 474 245 14 12 431 14 452 6.27e-54 186
MS.gene058365.t1 MTR_3g479620 48.795 166 83 1 6 171 2 165 3.19e-53 176
MS.gene058365.t1 MTR_5g066390 56.790 162 23 1 321 435 58 219 1.75e-50 170
MS.gene058365.t1 MTR_3g069690 27.966 472 257 13 12 431 10 450 5.34e-49 173
MS.gene058365.t1 MTR_5g031860 28.151 476 271 13 9 430 11 469 5.25e-48 171
MS.gene058365.t1 MTR_5g031830 27.197 478 278 12 7 430 9 470 3.42e-46 166
MS.gene058365.t1 MTR_5g031840 26.105 475 281 12 9 430 4 461 2.36e-45 164
MS.gene058365.t1 MTR_4g064987 27.564 468 248 13 12 422 10 443 1.91e-43 158
MS.gene058365.t1 MTR_1g107380 24.845 483 282 12 10 432 13 474 1.44e-42 156
MS.gene058365.t1 MTR_4g064987 27.331 472 238 14 12 422 10 437 4.08e-40 149
MS.gene058365.t1 MTR_6g038240 24.580 476 288 13 6 434 7 458 5.56e-40 149
MS.gene058365.t1 MTR_7g013240 25.316 474 257 13 9 427 5 436 1.10e-39 148
MS.gene058365.t1 MTR_7g013260 26.891 476 248 14 9 427 5 437 1.35e-39 147
MS.gene058365.t1 MTR_5g035580 26.250 480 258 13 6 427 9 450 1.80e-39 147
MS.gene058365.t1 MTR_6g038230 26.186 485 255 16 6 427 7 451 1.07e-38 145
MS.gene058365.t1 MTR_1g107350 25.051 491 268 16 10 430 8 468 1.57e-38 145
MS.gene058365.t1 MTR_7g080935 25.800 469 261 14 8 422 9 444 1.98e-38 145
MS.gene058365.t1 MTR_7g013200 27.195 467 258 14 9 427 4 436 1.36e-36 139
MS.gene058365.t1 MTR_7g080940 25.745 470 260 17 8 422 9 444 2.12e-36 139
MS.gene058365.t1 MTR_3g049970 23.554 484 284 11 10 430 9 469 8.45e-36 138
MS.gene058365.t1 MTR_6g038300 24.788 472 283 13 9 432 10 457 1.17e-35 137
MS.gene058365.t1 MTR_5g035560 25.207 484 266 14 6 431 7 452 2.67e-35 137
MS.gene058365.t1 MTR_4g095008 24.435 487 285 14 7 435 8 469 2.75e-35 137
MS.gene058365.t1 MTR_7g013220 26.115 471 261 14 9 423 4 443 3.16e-35 135
MS.gene058365.t1 MTR_8g064870 25.506 494 260 17 12 430 13 473 3.24e-35 136
MS.gene058365.t1 MTR_8g088560 25.263 475 274 16 10 430 10 457 8.07e-35 135
MS.gene058365.t1 MTR_7g013180 25.261 479 264 15 9 429 4 446 9.66e-35 134
MS.gene058365.t1 MTR_1g032490 24.224 483 282 11 10 430 10 470 1.25e-34 134
MS.gene058365.t1 MTR_7g080950 24.160 476 270 15 8 427 4 444 1.34e-34 134
MS.gene058365.t1 MTR_2086s0010 39.535 172 56 2 308 431 1 172 6.42e-34 125
MS.gene058365.t1 MTR_1996s0010 39.535 172 56 2 308 431 1 172 6.42e-34 125
MS.gene058365.t1 MTR_1g107315 25.714 490 282 13 1 430 1 468 1.17e-33 132
MS.gene058365.t1 MTR_6g038200 25.103 486 259 17 6 427 7 451 1.44e-33 131
MS.gene058365.t1 MTR_5g072860 25.949 474 274 17 10 431 18 466 1.62e-32 128
MS.gene058365.t1 MTR_6g038220 24.116 481 269 16 6 427 7 450 1.88e-32 128
MS.gene058365.t1 MTR_4g094920 24.341 493 284 16 5 435 19 484 5.13e-32 127
MS.gene058365.t1 MTR_5g075440 24.274 482 270 18 10 431 10 456 1.10e-31 126
MS.gene058365.t1 MTR_8g083290 25.403 496 264 19 9 431 2 464 1.40e-30 123
MS.gene058365.t1 MTR_1g107365 24.843 479 281 15 5 430 39 491 2.21e-30 123
MS.gene058365.t1 MTR_1g107285 23.944 497 257 17 12 430 10 463 4.17e-30 122
MS.gene058365.t1 MTR_7g070610 23.800 500 276 14 10 430 13 486 3.33e-29 119
MS.gene058365.t1 MTR_3g084520 25.100 498 265 19 10 430 6 472 5.61e-29 119
MS.gene058365.t1 MTR_5g072810 23.673 490 267 17 5 430 7 453 3.64e-28 116
MS.gene058365.t1 MTR_8g064880 26.039 361 232 11 12 358 11 350 4.08e-28 116
MS.gene058365.t1 MTR_1g107375 22.851 477 281 13 10 430 8 453 5.52e-28 115
MS.gene058365.t1 MTR_3g031450 25.678 479 265 16 5 431 13 452 5.86e-28 115
MS.gene058365.t1 MTR_1g107360 24.236 491 260 16 12 430 11 461 6.03e-28 115
MS.gene058365.t1 MTR_7g071040 25.245 511 265 15 5 430 12 490 1.08e-27 115
MS.gene058365.t1 MTR_3g084540 24.000 500 269 17 10 430 6 473 1.09e-27 115
MS.gene058365.t1 MTR_3g084530 23.647 499 271 16 10 430 6 472 2.92e-27 114
MS.gene058365.t1 MTR_7g070910 24.303 502 281 15 5 430 6 484 3.55e-27 114
MS.gene058365.t1 MTR_5g072830 23.431 478 270 14 10 430 10 448 1.13e-26 112
MS.gene058365.t1 MTR_3g031400 24.738 477 266 18 7 431 15 450 1.27e-26 112
MS.gene058365.t1 MTR_7g055710 23.611 504 269 14 10 429 11 482 1.88e-26 111
MS.gene058365.t1 MTR_5g072840 24.051 474 274 15 10 431 10 449 2.34e-26 110
MS.gene058365.t1 MTR_7g070860 24.536 485 273 18 10 430 7 462 3.76e-26 110
MS.gene058365.t1 MTR_4g485630 23.139 497 282 13 6 430 5 473 4.68e-26 110
MS.gene058365.t1 MTR_7g070800 22.938 497 280 15 10 430 6 475 5.84e-26 110
MS.gene058365.t1 MTR_5g098960 26.300 327 215 9 8 332 5 307 8.99e-26 109
MS.gene058365.t1 MTR_5g072820 24.524 473 271 18 10 430 10 448 3.01e-25 107
MS.gene058365.t1 MTR_8g027870 24.551 501 256 18 9 433 17 471 7.81e-25 106
MS.gene058365.t1 MTR_8g083280 24.689 482 273 16 12 431 9 462 1.44e-24 105
MS.gene058365.t1 MTR_4g008630 23.517 489 262 17 12 430 16 462 5.23e-24 104
MS.gene058365.t1 MTR_7g080900 25.070 359 225 12 10 360 12 334 8.97e-24 103
MS.gene058365.t1 MTR_7g070930 27.066 351 203 10 5 334 9 327 1.18e-23 103
MS.gene058365.t1 MTR_5g016480 27.394 376 227 17 11 369 9 355 2.29e-23 102
MS.gene058365.t1 MTR_4g108250 22.397 509 285 15 5 430 6 487 4.72e-23 101
MS.gene058365.t1 MTR_8g009073 23.400 500 265 15 10 433 6 463 5.00e-23 101
MS.gene058365.t1 MTR_6g014000 63.014 73 27 0 359 431 84 156 6.33e-23 101
MS.gene058365.t1 MTR_7g070660 25.146 342 201 9 10 332 11 316 2.29e-22 99.8
MS.gene058365.t1 MTR_7g070780 23.340 497 281 17 10 430 11 483 3.28e-22 99.4
MS.gene058365.t1 MTR_8g066610 23.625 491 283 18 10 430 9 477 3.56e-22 99.0
MS.gene058365.t1 MTR_8g008970 22.200 500 271 15 10 433 6 463 8.58e-22 98.6
MS.gene058365.t1 MTR_8g027885 23.742 497 265 16 9 433 17 471 1.20e-21 97.4
MS.gene058365.t1 MTR_6g033725 22.746 488 268 15 12 426 6 457 1.41e-21 97.1
MS.gene058365.t1 MTR_0078s0200 25.602 332 206 8 10 332 6 305 1.87e-21 94.7
MS.gene058365.t1 MTR_7g070740 24.706 340 220 10 5 332 6 321 2.13e-21 96.7
MS.gene058365.t1 MTR_0184s0030 25.602 332 206 8 10 332 6 305 2.57e-21 96.3
MS.gene058365.t1 MTR_6g033625 23.518 506 261 15 12 435 6 467 5.44e-21 95.5
MS.gene058365.t1 MTR_6g033615 23.431 478 270 14 12 428 6 448 1.93e-20 93.6
MS.gene058365.t1 MTR_1g107325 22.791 430 238 14 10 430 8 352 2.65e-20 92.4
MS.gene058365.t1 MTR_7g070810 22.800 500 268 20 13 430 12 475 3.19e-20 93.2
MS.gene058365.t1 MTR_8g006710 23.494 498 252 20 6 419 2 454 4.21e-20 92.8
MS.gene058365.t1 MTR_7g046490 24.722 360 180 11 135 427 125 460 5.45e-20 92.4
MS.gene058365.t1 MTR_6g042310 27.762 353 219 14 10 357 18 339 5.63e-20 92.4
MS.gene058365.t1 MTR_8g465670 27.729 339 182 12 12 332 9 302 5.77e-20 92.4
MS.gene058365.t1 MTR_7g070940 23.828 512 259 19 6 430 5 472 7.63e-20 92.0
MS.gene058365.t1 MTR_7g117405 27.586 348 196 14 6 332 8 320 8.14e-20 92.0
MS.gene058365.t1 MTR_5g045960 24.798 371 237 13 4 357 3 348 9.43e-20 91.7
MS.gene058365.t1 MTR_5g087620 25.496 353 222 17 1 333 1 332 1.04e-19 91.7
MS.gene058365.t1 MTR_7g102450 25.833 360 221 11 9 357 10 334 2.12e-19 90.5
MS.gene058365.t1 MTR_7g102490 23.587 513 275 17 8 433 7 489 3.13e-19 90.1
MS.gene058365.t1 MTR_6g013970 56.098 82 27 3 127 203 38 115 3.19e-19 86.3
MS.gene058365.t1 MTR_5g045970 26.400 375 213 16 10 357 16 354 3.69e-19 90.1
MS.gene058365.t1 MTR_4g024020 27.034 381 211 16 8 357 7 351 4.82e-19 89.7
MS.gene058365.t1 MTR_8g006730 26.801 347 190 14 6 332 2 304 2.48e-18 87.4
MS.gene058365.t1 MTR_8g009063 23.615 343 211 12 3 332 6 310 6.54e-18 86.3
MS.gene058365.t1 MTR_8g006260 24.425 348 201 14 7 333 3 309 8.24e-18 85.9
MS.gene058365.t1 MTR_1g019510 26.934 349 204 12 10 346 6 315 8.75e-18 85.9
MS.gene058365.t1 MTR_8g009067 20.850 494 277 14 10 427 6 461 8.77e-18 85.9
MS.gene058365.t1 MTR_6g033675 21.932 497 264 16 12 426 6 460 9.16e-18 85.9
MS.gene058365.t1 MTR_6g033660 23.204 362 201 11 122 426 118 459 1.29e-17 85.1
MS.gene058365.t1 MTR_5g090620 23.822 382 237 13 8 373 3 346 1.63e-17 85.1
MS.gene058365.t1 MTR_8g009050 28.440 218 131 7 118 332 108 303 1.96e-17 84.7
MS.gene058365.t1 MTR_5g067170 25.538 325 207 10 13 330 14 310 3.82e-17 84.0
MS.gene058365.t1 MTR_7g117170 23.108 489 260 18 9 419 14 464 3.88e-17 84.0
MS.gene058365.t1 MTR_0009s0240 25.344 363 232 14 5 357 2 335 5.22e-17 83.2
MS.gene058365.t1 MTR_8g006220 27.596 337 183 13 13 332 9 301 5.95e-17 83.2
MS.gene058365.t1 MTR_2g034990 24.138 493 274 19 13 430 14 481 9.24e-17 82.8
MS.gene058365.t1 MTR_4g117950 23.374 492 265 18 13 430 9 462 9.74e-17 82.4
MS.gene058365.t1 MTR_6g023665 25.904 332 198 12 12 332 15 309 1.08e-16 82.4
MS.gene058365.t1 MTR_8g007565 25.269 372 243 15 10 373 7 351 1.17e-16 82.4
MS.gene058365.t1 MTR_4g031800 24.233 326 214 9 13 332 12 310 1.93e-16 81.6
MS.gene058365.t1 MTR_5g016660 22.485 507 284 20 6 430 4 483 1.95e-16 81.6
MS.gene058365.t1 MTR_5g040030 21.600 500 283 14 12 430 16 487 2.57e-16 81.3
MS.gene058365.t1 MTR_4g485620 21.830 481 273 16 24 430 3 454 3.04e-16 80.9
MS.gene058365.t1 MTR_0184s0040 24.852 338 200 10 10 332 21 319 3.49e-16 80.9
MS.gene058365.t1 MTR_0078s0190 24.852 338 200 10 10 332 21 319 3.49e-16 80.9
MS.gene058365.t1 MTR_5g090630 26.385 379 221 15 8 373 3 336 3.65e-16 80.9
MS.gene058365.t1 MTR_7g070870 24.713 348 198 14 7 332 13 318 3.73e-16 80.9
MS.gene058365.t1 MTR_4g117960 25.982 331 198 15 13 330 14 310 4.71e-16 80.5
MS.gene058365.t1 MTR_8g012745 27.203 261 149 7 78 332 81 306 4.74e-16 80.5
MS.gene058365.t1 MTR_7g067330 23.297 455 239 16 8 407 7 406 4.78e-16 80.1
MS.gene058365.t1 MTR_8g077590 29.075 227 128 7 113 332 106 306 5.98e-16 80.1
MS.gene058365.t1 MTR_8g009073 24.438 356 177 10 144 433 5 334 6.99e-16 79.0
MS.gene058365.t1 MTR_8g009067 22.284 359 191 9 135 427 7 343 8.33e-16 79.0
MS.gene058365.t1 MTR_8g074550 25.073 343 200 15 8 332 5 308 8.73e-16 79.7
MS.gene058365.t1 MTR_8g007650 25.000 372 244 15 10 373 7 351 9.52e-16 79.3
MS.gene058365.t1 MTR_5g090670 25.469 373 237 14 8 370 3 344 9.65e-16 79.3
MS.gene058365.t1 MTR_6g005600 26.393 341 198 14 7 333 3 304 1.55e-15 79.0
MS.gene058365.t1 MTR_0536s0020 25.538 325 201 8 13 331 21 310 1.57e-15 79.0
MS.gene058365.t1 MTR_5g066410 23.224 366 237 11 13 373 1 327 2.12e-15 78.2
MS.gene058365.t1 MTR_6g488280 24.096 332 204 12 12 332 8 302 2.43e-15 78.2
MS.gene058365.t1 MTR_0428s0010 24.096 332 204 12 12 332 8 302 2.43e-15 78.2
MS.gene058365.t1 MTR_7g102520 26.377 345 201 15 10 332 12 325 2.50e-15 78.2
MS.gene058365.t1 MTR_5g090660 25.439 342 199 15 8 332 3 305 4.27e-15 77.8
MS.gene058365.t1 MTR_8g006230 28.571 217 129 6 119 332 52 245 6.18e-15 75.5
MS.gene058365.t1 MTR_8g009055 24.850 334 204 12 10 332 6 303 6.53e-15 77.0
MS.gene058365.t1 MTR_6g035265 26.380 326 196 14 13 330 14 303 8.36e-15 76.6
MS.gene058365.t1 MTR_2g035020 25.982 331 200 14 13 330 14 312 9.88e-15 76.3
MS.gene058365.t1 MTR_7g047030 23.077 338 206 10 10 332 6 304 1.24e-14 75.9
MS.gene058365.t1 MTR_7g047270 23.077 338 206 10 10 332 6 304 1.24e-14 75.9
MS.gene058365.t1 MTR_5g004940 26.754 228 128 6 242 430 150 377 1.81e-14 75.1
MS.gene058365.t1 MTR_5g004940 29.032 155 96 5 10 159 17 162 3.30e-11 65.1
MS.gene058365.t1 MTR_7g067120 23.230 452 243 16 8 407 7 406 1.88e-14 75.5
MS.gene058365.t1 MTR_8g006270 26.765 340 191 13 8 332 4 300 2.07e-14 75.5
MS.gene058365.t1 MTR_8g071070 25.135 370 236 11 4 357 1 345 2.12e-14 75.5
MS.gene058365.t1 MTR_0078s0060 22.177 487 259 15 10 416 6 452 8.28e-14 73.6
MS.gene058365.t1 MTR_4g123553 23.491 464 260 19 5 407 9 438 8.46e-14 73.6
MS.gene058365.t1 MTR_6g035295 23.460 341 210 13 12 332 14 323 9.19e-14 73.6
MS.gene058365.t1 MTR_2g098430 24.412 340 214 12 8 333 4 314 9.52e-14 73.6
MS.gene058365.t1 MTR_6g035185 22.892 332 209 12 13 330 14 312 1.15e-13 73.2
MS.gene058365.t1 MTR_8g008990 24.251 334 206 12 10 332 6 303 1.39e-13 72.8
MS.gene058365.t1 MTR_5g058330 55.932 59 25 1 212 269 11 69 1.43e-13 66.2
MS.gene058365.t1 MTR_0078s0010 23.529 340 202 10 10 332 6 304 2.49e-13 72.0
MS.gene058365.t1 MTR_5g090580 22.849 337 216 10 8 332 3 307 5.96e-13 70.9
MS.gene058365.t1 MTR_4g128690 21.941 474 281 15 10 430 15 452 8.51e-13 70.5
MS.gene058365.t1 MTR_1g107340 24.111 253 167 6 12 257 10 244 1.09e-12 68.2
MS.gene058365.t1 MTR_8g012635 27.734 256 142 9 84 332 87 306 2.62e-12 68.9
MS.gene058365.t1 MTR_7g106850 72.973 37 9 1 15 50 144 180 4.01e-12 65.1
MS.gene058365.t1 MTR_7g102560 21.687 498 292 18 10 431 9 484 8.19e-12 67.4
MS.gene058365.t1 MTR_5g090600 23.810 336 210 12 8 332 3 303 9.48e-12 67.0
MS.gene058365.t1 MTR_4g082810 24.800 250 160 7 120 358 110 342 1.15e-11 66.6
MS.gene058365.t1 MTR_7g012120 24.277 346 211 15 1 331 6 315 1.59e-11 66.6
MS.gene058365.t1 MTR_8g012650 27.434 226 133 7 114 332 105 306 1.92e-11 66.2
MS.gene058365.t1 MTR_5g029800 25.153 326 205 11 13 330 14 308 3.01e-11 65.5
MS.gene058365.t1 MTR_4g117980 24.412 340 194 12 13 330 14 312 4.72e-11 65.1
MS.gene058365.t1 MTR_5g098930 23.684 342 200 13 8 332 3 300 7.92e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058365.t1 AT1G22340 48.319 476 194 5 8 433 11 484 2.65e-164 471
MS.gene058365.t1 AT1G22360 47.826 483 201 4 1 434 1 481 2.13e-158 456
MS.gene058365.t1 AT1G22400 47.500 480 200 5 6 435 9 486 3.39e-158 456
MS.gene058365.t1 AT1G22380 47.059 476 201 4 8 434 11 484 6.63e-155 447
MS.gene058365.t1 AT1G22370 48.852 479 189 5 5 434 8 479 2.27e-153 443
MS.gene058365.t1 AT1G22360 46.584 483 195 5 1 434 1 469 2.89e-150 435
MS.gene058365.t1 AT1G78270 43.396 477 217 5 5 431 8 481 4.57e-139 407
MS.gene058365.t1 AT1G22370 44.884 303 118 3 181 434 7 309 1.85e-75 238
MS.gene058365.t1 AT5G59590 28.875 471 244 13 12 427 12 446 1.21e-51 180
MS.gene058365.t1 AT3G46670 28.358 469 249 13 12 427 11 445 2.93e-49 174
MS.gene058365.t1 AT5G59580 28.601 479 246 15 6 427 5 444 1.58e-48 172
MS.gene058365.t1 AT3G11340 26.681 476 262 13 7 431 6 445 7.06e-46 165
MS.gene058365.t1 AT3G46660 28.602 472 246 17 12 427 16 452 8.44e-46 165
MS.gene058365.t1 AT3G46690 28.243 478 249 14 8 428 7 447 9.46e-45 162
MS.gene058365.t1 AT2G36970 26.749 486 270 14 8 430 8 470 1.44e-44 162
MS.gene058365.t1 AT5G38010 27.542 472 255 15 12 428 12 451 1.90e-44 161
MS.gene058365.t1 AT3G21560 26.735 490 269 15 9 433 11 475 1.42e-43 159
MS.gene058365.t1 AT3G46650 26.350 463 239 14 7 417 7 419 2.26e-43 157
MS.gene058365.t1 AT5G05860 26.737 475 262 12 10 432 9 449 1.27e-42 156
MS.gene058365.t1 AT3G02100 26.496 468 274 15 8 427 11 456 3.61e-42 155
MS.gene058365.t1 AT3G46680 27.178 482 247 14 8 427 7 446 9.76e-42 154
MS.gene058365.t1 AT5G05870 25.523 478 268 12 10 430 8 454 1.81e-40 150
MS.gene058365.t1 AT3G46700 26.598 485 247 18 8 430 7 444 2.26e-40 150
MS.gene058365.t1 AT3G46720 28.092 477 240 16 8 427 7 437 2.29e-39 147
MS.gene058365.t1 AT5G38040 25.322 466 257 13 18 428 18 447 1.22e-38 145
MS.gene058365.t1 AT5G05900 25.316 474 259 12 11 427 9 444 1.77e-38 145
MS.gene058365.t1 AT2G28080 26.096 479 269 13 14 433 22 474 2.00e-37 142
MS.gene058365.t1 AT4G15500 25.462 487 268 13 9 431 8 463 2.42e-37 142
MS.gene058365.t1 AT4G15490 25.806 496 264 19 10 434 8 470 1.67e-36 140
MS.gene058365.t1 AT3G55700 25.833 480 258 18 12 431 10 451 2.95e-36 139
MS.gene058365.t1 AT4G15480 23.760 484 282 14 10 430 19 478 1.02e-35 138
MS.gene058365.t1 AT5G05890 26.050 476 260 14 10 427 8 449 9.59e-34 132
MS.gene058365.t1 AT5G05880 25.053 475 262 14 10 427 8 445 4.27e-33 130
MS.gene058365.t1 AT1G05675 24.313 473 274 11 10 427 6 449 9.04e-33 129
MS.gene058365.t1 AT2G26480 25.000 480 261 16 12 433 10 448 2.33e-32 128
MS.gene058365.t1 AT1G05680 23.789 475 274 12 10 429 6 447 2.34e-32 128
MS.gene058365.t1 AT2G43840 29.394 330 193 12 8 332 5 299 3.51e-31 124
MS.gene058365.t1 AT4G34131 24.547 497 278 16 6 429 6 478 1.72e-30 123
MS.gene058365.t1 AT2G31750 24.174 484 275 14 7 431 5 455 2.77e-30 122
MS.gene058365.t1 AT2G43840 29.091 330 194 12 8 332 5 299 3.49e-30 122
MS.gene058365.t1 AT2G31750 24.174 484 275 14 7 431 5 455 4.65e-30 122
MS.gene058365.t1 AT3G55710 26.151 478 263 18 12 431 10 455 4.29e-29 119
MS.gene058365.t1 AT2G23250 25.966 466 254 19 19 430 7 435 4.38e-29 118
MS.gene058365.t1 AT2G43820 28.399 331 199 13 6 332 3 299 2.94e-28 116
MS.gene058365.t1 AT2G31790 23.810 483 270 12 8 427 6 453 4.26e-27 113
MS.gene058365.t1 AT2G15480 25.358 489 279 14 10 430 10 480 5.47e-27 113
MS.gene058365.t1 AT4G01070 30.114 352 191 12 9 345 7 318 6.00e-27 111
MS.gene058365.t1 AT4G01070 30.383 339 181 12 9 332 7 305 7.68e-27 112
MS.gene058365.t1 AT2G15490 24.744 489 282 14 10 430 7 477 4.48e-26 110
MS.gene058365.t1 AT2G15480 24.850 499 279 14 10 430 10 490 1.13e-25 109
MS.gene058365.t1 AT2G30140 23.941 472 275 16 10 430 13 451 1.41e-25 108
MS.gene058365.t1 AT2G15490 24.593 492 282 15 10 430 7 480 1.92e-25 108
MS.gene058365.t1 AT2G30140 23.941 472 274 16 10 430 13 450 2.06e-25 108
MS.gene058365.t1 AT2G36770 27.371 369 217 16 10 357 14 352 3.16e-25 108
MS.gene058365.t1 AT4G15550 23.422 491 280 14 7 429 10 472 5.01e-25 107
MS.gene058365.t1 AT1G10400 24.792 480 280 19 8 429 5 461 2.61e-24 105
MS.gene058365.t1 AT2G36800 28.338 367 217 14 10 357 12 351 3.63e-24 105
MS.gene058365.t1 AT5G37950 27.729 339 205 14 25 357 1 305 4.99e-24 102
MS.gene058365.t1 AT4G34135 27.299 348 204 12 6 332 7 326 5.35e-24 102
MS.gene058365.t1 AT2G23260 25.000 480 269 17 10 432 10 455 7.17e-24 103
MS.gene058365.t1 AT1G30530 23.126 467 284 11 11 431 14 451 8.07e-24 103
MS.gene058365.t1 AT4G14090 22.449 490 278 16 2 429 5 454 9.34e-24 103
MS.gene058365.t1 AT2G36790 26.772 508 254 21 10 431 13 488 1.05e-23 103
MS.gene058365.t1 AT4G34135 27.479 353 197 13 6 332 7 326 1.41e-23 103
MS.gene058365.t1 AT3G53150 24.865 370 228 12 10 357 22 363 6.47e-23 101
MS.gene058365.t1 AT1G05560 26.220 328 198 11 9 330 4 293 8.74e-23 100
MS.gene058365.t1 AT2G36760 24.200 500 277 19 10 431 14 489 1.06e-22 100
MS.gene058365.t1 AT2G36780 27.123 365 223 11 10 357 14 352 1.07e-22 100
MS.gene058365.t1 AT1G05560 26.220 328 198 11 9 330 54 343 1.23e-22 100
MS.gene058365.t1 AT2G16890 24.449 499 259 20 10 430 9 467 2.16e-22 99.8
MS.gene058365.t1 AT3G53160 27.548 363 224 14 10 357 8 346 3.35e-22 99.4
MS.gene058365.t1 AT1G01420 26.186 485 262 17 9 426 7 462 3.70e-22 99.0
MS.gene058365.t1 AT2G30150 22.081 471 286 14 10 430 13 452 3.79e-22 99.0
MS.gene058365.t1 AT1G01420 26.186 485 262 17 9 426 10 465 4.02e-22 99.0
MS.gene058365.t1 AT5G37950 27.515 338 201 13 25 357 1 299 5.18e-22 97.1
MS.gene058365.t1 AT5G66690 22.530 506 266 16 7 429 4 466 6.46e-22 98.2
MS.gene058365.t1 AT1G05530 22.607 491 277 16 7 431 2 455 9.14e-22 97.8
MS.gene058365.t1 AT5G26310 22.376 505 268 16 7 429 4 466 1.42e-21 97.4
MS.gene058365.t1 AT2G36750 26.027 365 226 16 10 357 10 347 6.68e-21 95.5
MS.gene058365.t1 AT5G14860 25.000 504 259 23 10 430 8 475 7.77e-21 95.1
MS.gene058365.t1 AT2G30150 21.842 467 284 14 14 430 1 436 8.67e-21 94.7
MS.gene058365.t1 AT1G01390 28.531 354 212 13 5 353 4 321 9.08e-21 94.7
MS.gene058365.t1 AT1G01390 28.531 354 212 13 5 353 21 338 1.12e-20 94.7
MS.gene058365.t1 AT1G51210 27.072 362 212 15 5 357 15 333 3.10e-20 92.8
MS.gene058365.t1 AT5G03490 24.948 485 266 19 6 429 14 461 3.89e-20 92.8
MS.gene058365.t1 AT5G17050 21.895 475 289 12 10 431 12 457 3.89e-20 92.8
MS.gene058365.t1 AT1G24100 22.840 486 276 17 8 430 9 458 6.65e-20 92.0
MS.gene058365.t1 AT3G22250 22.727 462 265 13 8 403 6 441 5.80e-19 89.4
MS.gene058365.t1 AT5G17040 21.474 475 281 11 10 431 5 440 1.46e-18 87.8
MS.gene058365.t1 AT3G21780 28.097 331 203 11 8 332 2 303 3.11e-17 84.0
MS.gene058365.t1 AT5G17030 22.059 476 286 16 10 431 12 456 3.31e-17 84.0
MS.gene058365.t1 AT2G16890 25.916 382 219 18 10 369 9 348 6.09e-17 82.8
MS.gene058365.t1 AT1G73880 25.050 499 271 21 2 431 3 467 6.52e-17 83.2
MS.gene058365.t1 AT3G50740 24.412 340 207 10 7 333 4 306 1.13e-16 82.4
MS.gene058365.t1 AT5G49690 23.691 363 238 12 1 357 1 330 1.34e-16 82.0
MS.gene058365.t1 AT5G17040 23.000 300 179 6 176 431 47 338 1.82e-16 80.9
MS.gene058365.t1 AT3G16520 25.610 246 155 8 119 357 113 337 1.97e-16 81.6
MS.gene058365.t1 AT3G16520 25.403 248 157 8 119 359 113 339 2.05e-16 81.6
MS.gene058365.t1 AT3G16520 25.403 248 157 8 119 359 113 339 2.31e-16 81.3
MS.gene058365.t1 AT3G21790 25.526 333 210 9 12 332 6 312 5.52e-16 80.5
MS.gene058365.t1 AT5G65550 24.793 363 238 12 4 357 1 337 1.17e-15 79.3
MS.gene058365.t1 AT3G21800 25.455 330 210 10 12 332 7 309 1.78e-15 78.6
MS.gene058365.t1 AT2G18560 24.595 309 142 11 188 423 79 369 5.08e-14 73.6
MS.gene058365.t1 AT2G23210 25.743 303 188 13 1 299 1 270 2.01e-13 70.9
MS.gene058365.t1 AT4G15280 26.727 333 202 12 12 332 6 308 1.47e-11 66.6
MS.gene058365.t1 AT4G15280 26.727 333 202 12 12 332 38 340 1.98e-11 66.2
MS.gene058365.t1 AT3G21760 24.496 347 199 10 12 332 6 315 5.78e-11 64.7
MS.gene058365.t1 AT4G15260 26.087 207 128 6 129 332 4 188 6.73e-11 63.9

Find 85 sgRNAs with CRISPR-Local

Find 122 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATCTAACAAATGGATATT+TGG 0.229612 3.2:+2423682 MS.gene058365:CDS
TAAGTTCACAGTAGGGTTTA+AGG 0.267569 3.2:-2423036 None:intergenic
GAACTTCGACAAAGTTATTA+AGG 0.274968 3.2:+2424564 MS.gene058365:CDS
TCTAGTGATGTTAGACCATC+TGG 0.321083 3.2:-2422953 None:intergenic
CGCCTTCTTCTTCAATTCCA+TGG 0.324635 3.2:-2424506 None:intergenic
GCAAAACTACTTCACCTTAG+AGG 0.327381 3.2:+2422824 MS.gene058365:CDS
ATTGATGAATTTGTGGAGTT+TGG 0.329616 3.2:-2423949 None:intergenic
ACAAAAGTAGATTGGATTCC+AGG 0.332750 3.2:+2423707 MS.gene058365:CDS
AACTCCACAAATTCATCAAT+TGG 0.344444 3.2:+2423952 MS.gene058365:CDS
AATAAAGAACATGCACTTGA+TGG 0.347416 3.2:-2423178 None:intergenic
AATTCTAACATAATATCGTT+TGG 0.350657 3.2:-2423782 None:intergenic
TATGACTCCGGAGCAACTTC+AGG 0.353198 3.2:+2424081 MS.gene058365:CDS
TCTGTTGTTTATGTGAATTT+TGG 0.355712 3.2:+2424046 MS.gene058365:CDS
GTGGACACCAACTTGCTATT+AGG 0.356812 3.2:-2424225 None:intergenic
GCAACTTCAGGAATTTGCTT+GGG 0.357943 3.2:+2424093 MS.gene058365:CDS
ATTTGTAATGAATGGAAGAT+TGG 0.360252 3.2:+2424388 MS.gene058365:CDS
ATATGGCCTTGAGCTGGATA+TGG 0.361172 3.2:-2422782 None:intergenic
ATTCTTTAGATTCCAACCTT+TGG 0.362742 3.2:+2423975 MS.gene058365:CDS
TTCACATAAACAACAGATCT+TGG 0.367861 3.2:-2424040 None:intergenic
ATTTGGAAACAAAAGTAGAT+TGG 0.372644 3.2:+2423699 MS.gene058365:CDS
GCGAATGAAATTTCAGATAG+AGG 0.373882 3.2:+2424202 MS.gene058365:CDS
GTGAAACAATCTAAGGCATT+TGG 0.376724 3.2:-2422908 None:intergenic
AGGTTATGTAAAAGCCTCTA+AGG 0.385615 3.2:-2422838 None:intergenic
TCAGGAATTTGCTTGGGGCT+TGG 0.391060 3.2:+2424099 MS.gene058365:CDS
TCAGAAACTAAGCAAGTAAC+TGG 0.402772 3.2:-2423091 None:intergenic
AAAATCAGTGAAACAATCTA+AGG 0.408184 3.2:-2422915 None:intergenic
GCTTGAACAATGGATTGATA+TGG 0.418364 3.2:-2422799 None:intergenic
CATATTCTTTCCTTCATCTC+CGG 0.426958 3.2:-2424473 None:intergenic
AGCAACTTCAGGAATTTGCT+TGG 0.434954 3.2:+2424092 MS.gene058365:CDS
GAATCCAATTGATGAATTTG+TGG 0.435101 3.2:-2423956 None:intergenic
GTAGATTTATTTGTAATGAA+TGG 0.436882 3.2:+2424380 MS.gene058365:CDS
GATATCTTCTTTCCAAAGGT+TGG 0.437371 3.2:-2423987 None:intergenic
GGTTCAATAATGAAGGTAAA+GGG 0.439407 3.2:-2423928 None:intergenic
GGAGTTTGGTTCAATAATGA+AGG 0.439737 3.2:-2423935 None:intergenic
TTTCGTTCCTTTGTAGAAAG+AGG 0.447329 3.2:+2423214 MS.gene058365:CDS
GATGAGAGTTATCTAACAAA+TGG 0.452799 3.2:+2423674 MS.gene058365:intron
GGCGGAGGAGAACACTAAAC+CGG 0.455237 3.2:+2424525 MS.gene058365:CDS
ATTCCTTATGTTTACCCGAT+TGG 0.455975 3.2:+2423905 MS.gene058365:CDS
AATGAAGGTAAAGGGCCAAT+CGG 0.457592 3.2:-2423920 None:intergenic
AGGAAAGAATATGAGAGAAA+AGG 0.470738 3.2:+2424483 MS.gene058365:CDS
TGGTTCAATAATGAAGGTAA+AGG 0.485974 3.2:-2423929 None:intergenic
GACTTAGCAGTACCTTTGAA+TGG 0.487769 3.2:-2423244 None:intergenic
GGGCCAATCGGGTAAACATA+AGG 0.490912 3.2:-2423908 None:intergenic
ATGAAGGTAAAGGGCCAATC+GGG 0.500209 3.2:-2423919 None:intergenic
CAACTTCAGGAATTTGCTTG+GGG 0.503520 3.2:+2424094 MS.gene058365:CDS
ACTAGGCCCGATCTTGTCAT+TGG 0.504474 3.2:+2424151 MS.gene058365:CDS
GATGGTCTAACATCACTAGA+AGG 0.505360 3.2:+2422956 MS.gene058365:CDS
GAGCCACCAATGACAAGATC+GGG 0.506628 3.2:-2424157 None:intergenic
TCTAGTAATAAGTTCACAGT+AGG 0.506695 3.2:-2423044 None:intergenic
GAATTGATAGCCGGAGATGA+AGG 0.510756 3.2:+2424463 MS.gene058365:CDS
TAATGAATGGAAGATTGGTA+TGG 0.522438 3.2:+2424393 MS.gene058365:CDS
GCAAATTCCTGAAGTTGCTC+CGG 0.524094 3.2:-2424088 None:intergenic
TGAGCCACCAATGACAAGAT+CGG 0.532905 3.2:-2424158 None:intergenic
TCTTCAATGGCTTGAATCGA+AGG 0.535713 3.2:+2424015 MS.gene058365:CDS
AGGCCCGATCTTGTCATTGG+TGG 0.537931 3.2:+2424154 MS.gene058365:CDS
CTTATAGATTGACAAAGAGA+AGG 0.544169 3.2:-2423004 None:intergenic
GGCCATGGAATTGAAGAAGA+AGG 0.544327 3.2:+2424504 MS.gene058365:CDS
AAGATATCGAGTGTCTTCAA+TGG 0.554080 3.2:+2424002 MS.gene058365:CDS
GGATTGATATGGCCTTGAGC+TGG 0.560144 3.2:-2422788 None:intergenic
GAATGTGAAGAGAGAGGAGG+TGG 0.563109 3.2:+2424426 MS.gene058365:CDS
ACTCGATATCTTCTTTCCAA+AGG 0.563526 3.2:-2423991 None:intergenic
CTGATCAATGAATTGATAGC+CGG 0.567126 3.2:+2424454 MS.gene058365:CDS
AGCTTTGAAACCATCCCAGA+TGG 0.571170 3.2:+2422938 MS.gene058365:CDS
GAATATGAGAGAAAAGGCCA+TGG 0.574029 3.2:+2424489 MS.gene058365:CDS
GTAAACATAAGGAATTATAG+AGG 0.579325 3.2:-2423897 None:intergenic
TTGATTCCATATCCAGCTCA+AGG 0.594605 3.2:+2422776 MS.gene058365:CDS
CTAGTGATGTTAGACCATCT+GGG 0.609090 3.2:-2422952 None:intergenic
TTCATGTATGAACAACCACC+CGG 0.610555 3.2:-2424544 None:intergenic
AAACGCTTGCTCAAATCAAG+AGG 0.611360 3.2:+2422884 MS.gene058365:CDS
GGAATTGAAGAAGAAGGCGG+AGG 0.613364 3.2:+2424510 MS.gene058365:CDS
AGAGGCATCACACCATTCAA+AGG 0.614365 3.2:+2423232 MS.gene058365:CDS
TATGGAATCAACACAGCATG+TGG 0.616639 3.2:-2422764 None:intergenic
TGATGTTAGACCATCTGGGA+TGG 0.618549 3.2:-2422948 None:intergenic
CTAGTAATAAGTTCACAGTA+GGG 0.625306 3.2:-2423043 None:intergenic
GAAACTAAGCAAGTAACTGG+TGG 0.626441 3.2:-2423088 None:intergenic
AAGCATTACAGTTATGACTC+CGG 0.627386 3.2:+2424069 MS.gene058365:CDS
TGTGATGCCTCTTTCTACAA+AGG 0.638539 3.2:-2423221 None:intergenic
CTAACATCACTAGAAGGTGA+TGG 0.647205 3.2:+2422962 MS.gene058365:CDS
CGATACGAATGTGAAGAGAG+AGG 0.648365 3.2:+2424420 MS.gene058365:CDS
GCAAGTAACTGGTGGAACAG+TGG 0.651625 3.2:-2423080 None:intergenic
GCGGAGGAGAACACTAAACC+GGG 0.664155 3.2:+2424526 MS.gene058365:CDS
ATTGTATTCAGTGTTGACAA+AGG 0.675767 3.2:-2422858 None:intergenic
CATGGAATTGAAGAAGAAGG+CGG 0.693462 3.2:+2424507 MS.gene058365:CDS
TACGAATGTGAAGAGAGAGG+AGG 0.708664 3.2:+2424423 MS.gene058365:CDS
GAGGAGAACACTAAACCGGG+TGG 0.750852 3.2:+2424529 MS.gene058365:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAGTTTTTGAAAAATAAAA+TGG - chr3.2:2423383-2423402 None:intergenic 10.0%
!!! ATTTTTCAAAAACTATTGAA+GGG + chr3.2:2423387-2423406 MS.gene058365:intron 15.0%
!!! TAATGATAGATAATTTTACA+AGG + chr3.2:2423423-2423442 MS.gene058365:intron 15.0%
!!! TATTTTTCAAAAACTATTGA+AGG + chr3.2:2423386-2423405 MS.gene058365:intron 15.0%
!! AATTCTAACATAATATCGTT+TGG - chr3.2:2423785-2423804 None:intergenic 20.0%
!! GTAGATTTATTTGTAATGAA+TGG + chr3.2:2424380-2424399 MS.gene058365:CDS 20.0%
!! TACAAAAGTTAATAGTTTGA+AGG - chr3.2:2423641-2423660 None:intergenic 20.0%
!! TTATCTAACAAATGGATATT+TGG + chr3.2:2423682-2423701 MS.gene058365:CDS 20.0%
!!! TTTTTCAAAAACTATTGAAG+GGG + chr3.2:2423388-2423407 MS.gene058365:intron 20.0%
! AAAATCAGTGAAACAATCTA+AGG - chr3.2:2422918-2422937 None:intergenic 25.0%
! ATGGAAAAAAGAGAACATTA+GGG - chr3.2:2423162-2423181 None:intergenic 25.0%
! ATTTGGAAACAAAAGTAGAT+TGG + chr3.2:2423699-2423718 MS.gene058365:CDS 25.0%
! ATTTGTAATGAATGGAAGAT+TGG + chr3.2:2424388-2424407 MS.gene058365:CDS 25.0%
! CAAATAAATCTACAATCTGT+TGG - chr3.2:2424373-2424392 None:intergenic 25.0%
! GTAAACATAAGGAATTATAG+AGG - chr3.2:2423900-2423919 None:intergenic 25.0%
! TATATGTCAAGAGTTAATCT+TGG - chr3.2:2423348-2423367 None:intergenic 25.0%
!! TTCCAGGTTTGAAAAATTTT+CGG + chr3.2:2423723-2423742 MS.gene058365:CDS 25.0%
!! TTTGAAAAATTTTCGGTTGA+AGG + chr3.2:2423730-2423749 MS.gene058365:CDS 25.0%
!! TTTTCAAAAACTATTGAAGG+GGG + chr3.2:2423389-2423408 MS.gene058365:intron 25.0%
!!! TCTGTTGTTTATGTGAATTT+TGG + chr3.2:2424046-2424065 MS.gene058365:CDS 25.0%
AAAAATGGCCAACATAACAT+TGG - chr3.2:2424340-2424359 None:intergenic 30.0%
AACTCCACAAATTCATCAAT+TGG + chr3.2:2423952-2423971 MS.gene058365:CDS 30.0%
AATAAAGAACATGCACTTGA+TGG - chr3.2:2423181-2423200 None:intergenic 30.0%
ACTCGATTAACGAATCTATA+AGG - chr3.2:2423474-2423493 None:intergenic 30.0%
AGGAAAGAATATGAGAGAAA+AGG + chr3.2:2424483-2424502 MS.gene058365:CDS 30.0%
ATTCTTTAGATTCCAACCTT+TGG + chr3.2:2423975-2423994 MS.gene058365:CDS 30.0%
ATTGATGAATTTGTGGAGTT+TGG - chr3.2:2423952-2423971 None:intergenic 30.0%
CTAGTAATAAGTTCACAGTA+GGG - chr3.2:2423046-2423065 None:intergenic 30.0%
CTTATAGATTGACAAAGAGA+AGG - chr3.2:2423007-2423026 None:intergenic 30.0%
GAACTTCGACAAAGTTATTA+AGG + chr3.2:2424564-2424583 MS.gene058365:CDS 30.0%
GAATCCAATTGATGAATTTG+TGG - chr3.2:2423959-2423978 None:intergenic 30.0%
GATGAGAGTTATCTAACAAA+TGG + chr3.2:2423674-2423693 MS.gene058365:intron 30.0%
GATGGAAAAAAGAGAACATT+AGG - chr3.2:2423163-2423182 None:intergenic 30.0%
GGTTCAATAATGAAGGTAAA+GGG - chr3.2:2423931-2423950 None:intergenic 30.0%
TAATGAATGGAAGATTGGTA+TGG + chr3.2:2424393-2424412 MS.gene058365:CDS 30.0%
TCTAGTAATAAGTTCACAGT+AGG - chr3.2:2423047-2423066 None:intergenic 30.0%
TGGTTCAATAATGAAGGTAA+AGG - chr3.2:2423932-2423951 None:intergenic 30.0%
TTCACATAAACAACAGATCT+TGG - chr3.2:2424043-2424062 None:intergenic 30.0%
TTCATATACACACACATATG+AGG - chr3.2:2423618-2423637 None:intergenic 30.0%
TTTCAAAAACTATTGAAGGG+GGG + chr3.2:2423390-2423409 MS.gene058365:intron 30.0%
!! AACCGAAAATTTTTCAAACC+TGG - chr3.2:2423728-2423747 None:intergenic 30.0%
!! ATTGTATTCAGTGTTGACAA+AGG - chr3.2:2422861-2422880 None:intergenic 30.0%
!!! AGAGTTTTTAATTTGACGGT+TGG - chr3.2:2423507-2423526 None:intergenic 30.0%
!!! AGCGAGAGTTTTTAATTTGA+CGG - chr3.2:2423511-2423530 None:intergenic 30.0%
!!! ATAGCAAGACACTATTTTTG+TGG + chr3.2:2424125-2424144 MS.gene058365:CDS 30.0%
AAGATATCGAGTGTCTTCAA+TGG + chr3.2:2424002-2424021 MS.gene058365:CDS 35.0%
AAGCATTACAGTTATGACTC+CGG + chr3.2:2424069-2424088 MS.gene058365:CDS 35.0%
ACAAAAGTAGATTGGATTCC+AGG + chr3.2:2423707-2423726 MS.gene058365:CDS 35.0%
ACTCGATATCTTCTTTCCAA+AGG - chr3.2:2423994-2424013 None:intergenic 35.0%
AGGTTATGTAAAAGCCTCTA+AGG - chr3.2:2422841-2422860 None:intergenic 35.0%
ATTCCTTATGTTTACCCGAT+TGG + chr3.2:2423905-2423924 MS.gene058365:CDS 35.0%
CATATTCTTTCCTTCATCTC+CGG - chr3.2:2424476-2424495 None:intergenic 35.0%
GATATCTTCTTTCCAAAGGT+TGG - chr3.2:2423990-2424009 None:intergenic 35.0%
GCGAATGAAATTTCAGATAG+AGG + chr3.2:2424202-2424221 MS.gene058365:CDS 35.0%
TAAGTTCACAGTAGGGTTTA+AGG - chr3.2:2423039-2423058 None:intergenic 35.0%
TCAGAAACTAAGCAAGTAAC+TGG - chr3.2:2423094-2423113 None:intergenic 35.0%
TTTCGTTCCTTTGTAGAAAG+AGG + chr3.2:2423214-2423233 MS.gene058365:CDS 35.0%
! CTGATCAATGAATTGATAGC+CGG + chr3.2:2424454-2424473 MS.gene058365:CDS 35.0%
! GGAGTTTGGTTCAATAATGA+AGG - chr3.2:2423938-2423957 None:intergenic 35.0%
! GTGAAACAATCTAAGGCATT+TGG - chr3.2:2422911-2422930 None:intergenic 35.0%
!! AGTTTTGCTAGCTTGAACAA+TGG - chr3.2:2422812-2422831 None:intergenic 35.0%
!! GCTTGAACAATGGATTGATA+TGG - chr3.2:2422802-2422821 None:intergenic 35.0%
!!! CACTATTTTTGTGGATCACT+AGG + chr3.2:2424134-2424153 MS.gene058365:CDS 35.0%
AAACGCTTGCTCAAATCAAG+AGG + chr3.2:2422884-2422903 MS.gene058365:CDS 40.0%
AATGAAGGTAAAGGGCCAAT+CGG - chr3.2:2423923-2423942 None:intergenic 40.0%
ATAGAGGCCTAATAGCAAGT+TGG + chr3.2:2424218-2424237 MS.gene058365:intron 40.0%
CATGGAATTGAAGAAGAAGG+CGG + chr3.2:2424507-2424526 MS.gene058365:CDS 40.0%
CTAACATCACTAGAAGGTGA+TGG + chr3.2:2422962-2422981 MS.gene058365:CDS 40.0%
CTAGTGATGTTAGACCATCT+GGG - chr3.2:2422955-2422974 None:intergenic 40.0%
GAAACTAAGCAAGTAACTGG+TGG - chr3.2:2423091-2423110 None:intergenic 40.0%
GAATATGAGAGAAAAGGCCA+TGG + chr3.2:2424489-2424508 MS.gene058365:CDS 40.0%
GACTTAGCAGTACCTTTGAA+TGG - chr3.2:2423247-2423266 None:intergenic 40.0%
GATGGTCTAACATCACTAGA+AGG + chr3.2:2422956-2422975 MS.gene058365:CDS 40.0%
GCAAAACTACTTCACCTTAG+AGG + chr3.2:2422824-2422843 MS.gene058365:CDS 40.0%
TATGGAATCAACACAGCATG+TGG - chr3.2:2422767-2422786 None:intergenic 40.0%
TCTAGTGATGTTAGACCATC+TGG - chr3.2:2422956-2422975 None:intergenic 40.0%
TCTTCAATGGCTTGAATCGA+AGG + chr3.2:2424015-2424034 MS.gene058365:CDS 40.0%
TGGTTCAACACTTTCTCTTG+TGG - chr3.2:2424247-2424266 None:intergenic 40.0%
TGTGATGCCTCTTTCTACAA+AGG - chr3.2:2423224-2423243 None:intergenic 40.0%
TTCATGTATGAACAACCACC+CGG - chr3.2:2424547-2424566 None:intergenic 40.0%
TTGATTCCATATCCAGCTCA+AGG + chr3.2:2422776-2422795 MS.gene058365:CDS 40.0%
! AGCAACTTCAGGAATTTGCT+TGG + chr3.2:2424092-2424111 MS.gene058365:CDS 40.0%
! CAACTTCAGGAATTTGCTTG+GGG + chr3.2:2424094-2424113 MS.gene058365:CDS 40.0%
! GCAACTTCAGGAATTTGCTT+GGG + chr3.2:2424093-2424112 MS.gene058365:CDS 40.0%
! TCAAGAATCCACCGATTGAA+GGG - chr3.2:2424270-2424289 None:intergenic 40.0%
! TCTACAATCTGTTGGCTGAT+CGG - chr3.2:2424365-2424384 None:intergenic 40.0%
ATGAAGGTAAAGGGCCAATC+GGG - chr3.2:2423922-2423941 None:intergenic 45.0%
CGATACGAATGTGAAGAGAG+AGG + chr3.2:2424420-2424439 MS.gene058365:CDS 45.0%
CGCCTTCTTCTTCAATTCCA+TGG - chr3.2:2424509-2424528 None:intergenic 45.0%
GATTCTTGACTCATTGCGGA+TGG + chr3.2:2424281-2424300 MS.gene058365:intron 45.0%
GCAAATTCCTGAAGTTGCTC+CGG - chr3.2:2424091-2424110 None:intergenic 45.0%
GGCCATGGAATTGAAGAAGA+AGG + chr3.2:2424504-2424523 MS.gene058365:CDS 45.0%
GTGTTGAACCACCCTTCAAT+CGG + chr3.2:2424256-2424275 MS.gene058365:intron 45.0%
GTTGGCTGATCGGCAAAAAA+TGG - chr3.2:2424355-2424374 None:intergenic 45.0%
TACGAATGTGAAGAGAGAGG+AGG + chr3.2:2424423-2424442 MS.gene058365:CDS 45.0%
TCCAGCACATATGCTTTCAG+TGG - chr3.2:2424314-2424333 None:intergenic 45.0%
TGAGCCACCAATGACAAGAT+CGG - chr3.2:2424161-2424180 None:intergenic 45.0%
TGATGTTAGACCATCTGGGA+TGG - chr3.2:2422951-2422970 None:intergenic 45.0%
! ACCACTGAAAGCATATGTGC+TGG + chr3.2:2424310-2424329 MS.gene058365:intron 45.0%
! ATATGGCCTTGAGCTGGATA+TGG - chr3.2:2422785-2422804 None:intergenic 45.0%
! CTGGAGTGCCAATGTTATGT+TGG + chr3.2:2424329-2424348 MS.gene058365:intron 45.0%
! GAATTGATAGCCGGAGATGA+AGG + chr3.2:2424463-2424482 MS.gene058365:CDS 45.0%
! GGTGGATTCTTGACTCATTG+CGG + chr3.2:2424277-2424296 MS.gene058365:intron 45.0%
! GTCAAGAATCCACCGATTGA+AGG - chr3.2:2424271-2424290 None:intergenic 45.0%
!! AGAGGCATCACACCATTCAA+AGG + chr3.2:2423232-2423251 MS.gene058365:CDS 45.0%
!! AGCTTTGAAACCATCCCAGA+TGG + chr3.2:2422938-2422957 MS.gene058365:CDS 45.0%
!! GTGGACACCAACTTGCTATT+AGG - chr3.2:2424228-2424247 None:intergenic 45.0%
ACTAGGCCCGATCTTGTCAT+TGG + chr3.2:2424151-2424170 MS.gene058365:CDS 50.0%
GAATGTGAAGAGAGAGGAGG+TGG + chr3.2:2424426-2424445 MS.gene058365:CDS 50.0%
GAGCCACCAATGACAAGATC+GGG - chr3.2:2424160-2424179 None:intergenic 50.0%
GCAAGTAACTGGTGGAACAG+TGG - chr3.2:2423083-2423102 None:intergenic 50.0%
GGAATTGAAGAAGAAGGCGG+AGG + chr3.2:2424510-2424529 MS.gene058365:CDS 50.0%
GGGCCAATCGGGTAAACATA+AGG - chr3.2:2423911-2423930 None:intergenic 50.0%
TATGACTCCGGAGCAACTTC+AGG + chr3.2:2424081-2424100 MS.gene058365:CDS 50.0%
TTGAACCACCCTTCAATCGG+TGG + chr3.2:2424259-2424278 MS.gene058365:intron 50.0%
! AGAATCCACCGATTGAAGGG+TGG - chr3.2:2424267-2424286 None:intergenic 50.0%
! GGATTGATATGGCCTTGAGC+TGG - chr3.2:2422791-2422810 None:intergenic 50.0%
! TCAGGAATTTGCTTGGGGCT+TGG + chr3.2:2424099-2424118 MS.gene058365:CDS 50.0%
AGGCCCGATCTTGTCATTGG+TGG + chr3.2:2424154-2424173 MS.gene058365:CDS 55.0%
GAGGAGAACACTAAACCGGG+TGG + chr3.2:2424529-2424548 MS.gene058365:CDS 55.0%
GCGGAGGAGAACACTAAACC+GGG + chr3.2:2424526-2424545 MS.gene058365:CDS 55.0%
GGCGGAGGAGAACACTAAAC+CGG + chr3.2:2424525-2424544 MS.gene058365:CDS 55.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 2422740 2424609 2422740 ID=MS.gene058365
chr3.2 mRNA 2422740 2424609 2422740 ID=MS.gene058365.t1;Parent=MS.gene058365
chr3.2 exon 2422740 2423253 2422740 ID=MS.gene058365.t1.exon1;Parent=MS.gene058365.t1
chr3.2 CDS 2422740 2423253 2422740 ID=cds.MS.gene058365.t1;Parent=MS.gene058365.t1
chr3.2 exon 2423675 2424235 2423675 ID=MS.gene058365.t1.exon2;Parent=MS.gene058365.t1
chr3.2 CDS 2423675 2424235 2423675 ID=cds.MS.gene058365.t1;Parent=MS.gene058365.t1
chr3.2 exon 2424377 2424609 2424377 ID=MS.gene058365.t1.exon3;Parent=MS.gene058365.t1
chr3.2 CDS 2424377 2424609 2424377 ID=cds.MS.gene058365.t1;Parent=MS.gene058365.t1
Gene Sequence

>MS.gene058365

ATGGTAAACTTTGCAAACACAAAACCACATGCTGTGTTGATTCCATATCCAGCTCAAGGCCATATCAATCCATTGTTCAAGCTAGCAAAACTACTTCACCTTAGAGGCTTTTACATAACCTTTGTCAACACTGAATACAATCACAAACGCTTGCTCAAATCAAGAGGTCCAAATGCCTTAGATTGTTTCACTGATTTTAGCTTTGAAACCATCCCAGATGGTCTAACATCACTAGAAGGTGATGGTGATGTTAGTCAACATGTGCCTTCTCTTTGTCAATCTATAAGAAAGAATTTCCTTAAACCCTACTGTGAACTTATTACTAGACTTAATCACTCTACCACTGTTCCACCAGTTACTTGCTTAGTTTCTGATTGTTTGATGAGCTTTACTATACAAGCTGCTGAAGAATTTGCACTCCCTAATGTTCTCTTTTTTCCATCAAGTGCATGTTCTTTATTGAATGTTATGCACTTTCGTTCCTTTGTAGAAAGAGGCATCACACCATTCAAAGGTACTGCTAAGTCTATTTTCTTGATAGATGATGATAGTATGTGTACTCTATATATATAGTGTGTATGCGCGCGCGTGAAATTCAACTTACTCCAAGATTAACTCTTGACATATATATATAGTTATTCCATTTTATTTTTCAAAAACTATTGAAGGGGGGAAATTATTTCTAATGATAGATAATTTTACAAGGTTAAACTCTTACTACTGAGCTGACACCTTATAGATTCGTTAATCGAGTTAATAACAAGCCAACCGTCAAATTAAAAACTCTCGCTGAGAAGATGACATGCACAAAATTTTATAAAACTTCAAAACTAAAATTCATATTTCAACAAATAACTCTCATTGAATGTATAATACCTCATATGTGTGTGTATATGAACCTTCAAACTATTAACTTTTGTACTTATGATATGCAGATGAGAGTTATCTAACAAATGGATATTTGGAAACAAAAGTAGATTGGATTCCAGGTTTGAAAAATTTTCGGTTGAAGGATATTGTTGACTTTATCAGAACAACAAATCCAAACGATATTATGTTAGAATTCTTTATTGAAATTGCAGATAGAGTTAATAGAGACTCTACTATTCTTTTGAATACTTTCAATGAACTTGAGAGTGATGTAATAAATGCTCTCTCCTCTATAATTCCTTATGTTTACCCGATTGGCCCTTTACCTTCATTATTGAACCAAACTCCACAAATTCATCAATTGGATTCTTTAGATTCCAACCTTTGGAAAGAAGATATCGAGTGTCTTCAATGGCTTGAATCGAAGGAACCAAGATCTGTTGTTTATGTGAATTTTGGAAGCATTACAGTTATGACTCCGGAGCAACTTCAGGAATTTGCTTGGGGCTTGGCAAATAGCAAGACACTATTTTTGTGGATCACTAGGCCCGATCTTGTCATTGGTGGCTCAGTGATTTTGTCATCTGACTTTGCGAATGAAATTTCAGATAGAGGCCTAATAGCAAGTTGGTGTCCACAAGAGAAAGTGTTGAACCACCCTTCAATCGGTGGATTCTTGACTCATTGCGGATGGAACTCAACCACTGAAAGCATATGTGCTGGAGTGCCAATGTTATGTTGGCCATTTTTTGCCGATCAGCCAACAGATTGTAGATTTATTTGTAATGAATGGAAGATTGGTATGGAAATCGATACGAATGTGAAGAGAGAGGAGGTGGCGAAGCTGATCAATGAATTGATAGCCGGAGATGAAGGAAAGAATATGAGAGAAAAGGCCATGGAATTGAAGAAGAAGGCGGAGGAGAACACTAAACCGGGTGGTTGTTCATACATGAACTTCGACAAAGTTATTAAGGAAGTGTTGCTTAAACAAAATTAG

Protein sequence

>MS.gene058365.t1

MVNFANTKPHAVLIPYPAQGHINPLFKLAKLLHLRGFYITFVNTEYNHKRLLKSRGPNALDCFTDFSFETIPDGLTSLEGDGDVSQHVPSLCQSIRKNFLKPYCELITRLNHSTTVPPVTCLVSDCLMSFTIQAAEEFALPNVLFFPSSACSLLNVMHFRSFVERGITPFKDESYLTNGYLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEIADRVNRDSTILLNTFNELESDVINALSSIIPYVYPIGPLPSLLNQTPQIHQLDSLDSNLWKEDIECLQWLESKEPRSVVYVNFGSITVMTPEQLQEFAWGLANSKTLFLWITRPDLVIGGSVILSSDFANEISDRGLIANCRFICNEWKIGMEIDTNVKREEVAKLINELIAGDEGKNMREKAMELKKKAEENTKPGGCSYMNFDKVIKEVLLKQN