AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene86114


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene86114.t1 MTR_6g014290 91.909 482 38 1 1 481 1 482 0.0 928
MS.gene86114.t1 MTR_3g008010 88.797 482 53 1 1 481 1 482 0.0 889
MS.gene86114.t1 MTR_6g014250 86.929 482 62 1 1 481 1 482 0.0 879
MS.gene86114.t1 MTR_6g014220 82.083 480 85 1 1 479 1 480 0.0 836
MS.gene86114.t1 MTR_6g014170 80.913 482 75 2 1 481 1 466 0.0 806
MS.gene86114.t1 MTR_6g014040 74.486 486 118 4 1 481 1 485 0.0 758
MS.gene86114.t1 MTR_6g014020 73.402 485 124 3 1 481 1 484 0.0 753
MS.gene86114.t1 MTR_6g013440 73.196 485 124 4 1 480 1 484 0.0 741
MS.gene86114.t1 MTR_6g014050 76.132 486 110 4 1 481 1 485 0.0 739
MS.gene86114.t1 MTR_0288s0020 73.814 485 101 3 1 480 1 464 0.0 734
MS.gene86114.t1 MTR_8g059425 72.521 484 128 3 1 481 1 482 0.0 729
MS.gene86114.t1 MTR_6g014310 73.814 485 121 4 1 480 1 484 0.0 728
MS.gene86114.t1 MTR_6g014270 72.107 484 128 3 4 481 1 483 0.0 726
MS.gene86114.t1 MTR_6g014200 73.542 480 122 3 4 479 1 479 0.0 714
MS.gene86114.t1 MTR_6g013450 70.722 485 136 4 1 480 1 484 0.0 713
MS.gene86114.t1 MTR_6g014150 71.784 482 131 3 4 481 1 481 0.0 705
MS.gene86114.t1 MTR_6g013960 68.660 485 147 3 1 481 1 484 0.0 700
MS.gene86114.t1 MTR_6g011340 71.694 484 132 3 1 480 1 483 0.0 699
MS.gene86114.t1 MTR_6g014300 69.136 486 127 5 1 480 1 469 0.0 693
MS.gene86114.t1 MTR_6g014187 69.072 485 145 3 1 481 1 484 0.0 692
MS.gene86114.t1 MTR_6g013900 68.595 484 148 2 1 481 1 483 0.0 675
MS.gene86114.t1 MTR_6g013990 70.393 483 136 4 1 479 1 480 0.0 671
MS.gene86114.t1 MTR_5g058320 67.427 482 141 4 1 480 1 468 0.0 665
MS.gene86114.t1 MTR_6g013920 66.874 483 156 2 1 480 1 482 0.0 659
MS.gene86114.t1 MTR_7g011470 68.595 484 133 5 1 480 1 469 0.0 658
MS.gene86114.t1 MTR_7g011470 67.769 484 133 4 1 480 1 465 0.0 651
MS.gene86114.t1 MTR_6g014240 65.762 479 135 4 4 481 1 451 0.0 634
MS.gene86114.t1 MTR_6g014186 63.542 480 132 4 4 479 1 441 0.0 624
MS.gene86114.t1 MTR_5g464810 59.746 472 185 5 10 479 12 480 0.0 590
MS.gene86114.t1 MTR_5g064240 59.746 472 185 5 10 479 12 480 0.0 590
MS.gene86114.t1 MTR_5g464760 57.851 484 195 7 1 478 1 481 0.0 577
MS.gene86114.t1 MTR_0036s0220 56.568 472 200 5 9 478 11 479 0.0 564
MS.gene86114.t1 MTR_6g013680 64.884 430 94 6 55 480 2 378 0.0 546
MS.gene86114.t1 MTR_2g008210 53.669 477 214 3 5 478 6 478 0.0 543
MS.gene86114.t1 MTR_8g043470 61.557 424 112 3 59 481 9 382 0.0 518
MS.gene86114.t1 MTR_3g079480 51.368 475 226 5 6 477 17 489 0.0 516
MS.gene86114.t1 MTR_3g479490 50.211 474 233 3 6 477 2 474 7.10e-180 513
MS.gene86114.t1 MTR_3g479520 49.789 474 235 3 6 477 11 483 1.11e-176 505
MS.gene86114.t1 MTR_4g094220 51.271 472 223 4 8 473 5 475 5.25e-173 495
MS.gene86114.t1 MTR_0477s0010 66.479 355 83 2 127 480 1 320 2.03e-168 477
MS.gene86114.t1 MTR_6g014160 54.227 485 130 8 1 481 1 397 1.67e-166 476
MS.gene86114.t1 MTR_3g479470 48.093 472 243 2 6 476 9 479 3.04e-160 463
MS.gene86114.t1 MTR_6g014190 71.575 292 82 1 190 481 1 291 1.38e-158 451
MS.gene86114.t1 MTR_0199s0010 78.491 265 55 2 1 264 1 264 1.10e-149 428
MS.gene86114.t1 MTR_8g007585 87.923 207 25 0 275 481 190 396 8.59e-134 392
MS.gene86114.t1 MTR_8g007585 85.263 190 26 2 1 189 1 189 2.23e-113 340
MS.gene86114.t1 MTR_6g014185 52.083 432 99 10 47 477 21 345 3.11e-131 384
MS.gene86114.t1 MTR_6g013435 57.746 355 104 6 127 480 1 310 6.59e-129 377
MS.gene86114.t1 MTR_3g479610 52.229 314 146 4 167 477 1 313 2.34e-115 342
MS.gene86114.t1 MTR_0891s0010 48.966 290 146 2 190 477 1 290 2.93e-102 308
MS.gene86114.t1 MTR_5g066390 84.568 162 25 0 320 481 58 219 4.57e-99 297
MS.gene86114.t1 MTR_6g013890 54.110 292 74 6 167 453 19 255 3.44e-96 291
MS.gene86114.t1 MTR_6g014195 67.179 195 60 2 1 191 1 195 5.07e-91 276
MS.gene86114.t1 MTR_3g069710 35.518 473 264 14 12 477 14 452 2.62e-90 283
MS.gene86114.t1 MTR_5g031840 33.403 476 291 13 9 476 4 461 1.55e-84 268
MS.gene86114.t1 MTR_5g031860 34.100 478 286 12 9 476 11 469 9.03e-83 264
MS.gene86114.t1 MTR_3g069690 33.966 474 272 13 12 477 10 450 2.35e-80 257
MS.gene86114.t1 MTR_5g031830 33.264 478 291 11 9 476 11 470 1.04e-78 253
MS.gene86114.t1 MTR_1g107380 31.967 488 287 13 10 478 13 474 1.03e-77 251
MS.gene86114.t1 MTR_4g064987 32.479 468 271 12 12 468 10 443 1.89e-76 247
MS.gene86114.t1 MTR_7g013200 33.262 469 273 11 9 473 4 436 3.71e-75 243
MS.gene86114.t1 MTR_7g013240 32.278 474 270 12 9 473 5 436 1.31e-74 241
MS.gene86114.t1 MTR_7g013180 32.165 485 273 14 1 473 1 441 6.78e-74 240
MS.gene86114.t1 MTR_6g038240 31.405 484 291 15 6 480 7 458 1.62e-73 239
MS.gene86114.t1 MTR_7g013260 33.049 469 274 9 9 473 5 437 3.45e-73 238
MS.gene86114.t1 MTR_4g064987 31.838 468 268 12 12 468 10 437 3.68e-72 235
MS.gene86114.t1 MTR_7g013220 32.203 472 277 12 9 469 4 443 4.62e-72 235
MS.gene86114.t1 MTR_2086s0010 57.558 172 72 1 307 477 1 172 7.65e-71 223
MS.gene86114.t1 MTR_1996s0010 57.558 172 72 1 307 477 1 172 7.65e-71 223
MS.gene86114.t1 MTR_7g080935 31.158 475 292 12 8 477 9 453 9.47e-71 232
MS.gene86114.t1 MTR_5g035580 31.447 477 283 12 6 473 9 450 2.13e-70 231
MS.gene86114.t1 MTR_1g107350 29.817 493 288 14 10 476 8 468 7.01e-70 230
MS.gene86114.t1 MTR_4g094920 31.301 492 297 15 5 481 19 484 2.01e-69 230
MS.gene86114.t1 MTR_4g095008 30.515 485 294 14 12 481 13 469 2.12e-69 231
MS.gene86114.t1 MTR_8g064870 31.098 492 281 16 12 476 13 473 5.09e-69 228
MS.gene86114.t1 MTR_7g080940 31.263 467 286 14 8 469 9 445 8.68e-69 227
MS.gene86114.t1 MTR_3g049970 29.979 487 295 11 10 476 9 469 1.35e-68 227
MS.gene86114.t1 MTR_8g083290 31.911 492 283 17 9 477 2 464 2.66e-68 226
MS.gene86114.t1 MTR_7g080950 29.916 478 294 12 8 477 4 448 3.35e-68 225
MS.gene86114.t1 MTR_6g038230 30.444 473 296 14 6 473 7 451 3.15e-66 220
MS.gene86114.t1 MTR_6g038300 31.315 479 289 15 9 478 10 457 6.69e-66 219
MS.gene86114.t1 MTR_5g035560 30.353 481 291 13 6 477 7 452 8.48e-66 220
MS.gene86114.t1 MTR_0475s0020 76.515 132 26 2 1 127 1 132 1.87e-65 210
MS.gene86114.t1 MTR_1g107360 30.675 489 292 14 5 476 3 461 1.31e-64 216
MS.gene86114.t1 MTR_6g014000 73.077 130 35 0 348 477 27 156 2.10e-64 216
MS.gene86114.t1 MTR_1g032490 30.642 483 297 12 10 476 10 470 2.47e-64 216
MS.gene86114.t1 MTR_1g107375 29.897 485 283 16 10 476 8 453 3.28e-64 215
MS.gene86114.t1 MTR_1g107315 31.600 500 286 14 1 476 1 468 6.47e-64 215
MS.gene86114.t1 MTR_1g107365 30.505 495 279 17 5 476 39 491 2.64e-63 214
MS.gene86114.t1 MTR_8g088560 30.380 474 297 14 10 476 10 457 5.75e-63 212
MS.gene86114.t1 MTR_3g084540 32.311 489 288 16 10 476 6 473 8.72e-63 212
MS.gene86114.t1 MTR_5g016480 31.200 500 297 19 4 481 1 475 1.58e-62 211
MS.gene86114.t1 MTR_6g038200 29.958 474 297 16 6 473 7 451 2.46e-62 210
MS.gene86114.t1 MTR_6g038220 30.353 481 285 17 6 473 7 450 2.39e-61 207
MS.gene86114.t1 MTR_3g084520 31.504 492 287 18 10 476 6 472 1.92e-60 206
MS.gene86114.t1 MTR_3g084530 31.546 485 296 14 10 476 6 472 2.60e-60 205
MS.gene86114.t1 MTR_8g064880 30.388 464 273 15 12 450 11 449 2.98e-60 205
MS.gene86114.t1 MTR_7g070610 28.257 499 301 12 10 476 13 486 3.67e-59 202
MS.gene86114.t1 MTR_8g083280 31.098 492 275 15 12 477 9 462 1.12e-58 201
MS.gene86114.t1 MTR_1g107285 28.542 480 302 10 12 476 10 463 1.15e-58 201
MS.gene86114.t1 MTR_5g075440 29.652 489 281 15 10 477 10 456 3.75e-58 199
MS.gene86114.t1 MTR_7g071040 28.486 502 306 12 5 476 12 490 2.13e-57 198
MS.gene86114.t1 MTR_7g080900 28.782 476 294 16 5 469 7 448 5.73e-57 196
MS.gene86114.t1 MTR_3g479620 50.303 165 81 1 6 170 2 165 7.62e-56 184
MS.gene86114.t1 MTR_7g055710 27.689 502 297 11 10 475 11 482 1.17e-55 193
MS.gene86114.t1 MTR_7g070800 27.419 496 305 14 10 476 6 475 2.94e-55 192
MS.gene86114.t1 MTR_3g031450 31.250 480 273 15 10 477 18 452 4.82e-55 191
MS.gene86114.t1 MTR_5g072810 28.986 483 286 14 10 476 12 453 1.12e-54 189
MS.gene86114.t1 MTR_7g102450 28.858 499 297 14 9 481 10 476 2.82e-54 189
MS.gene86114.t1 MTR_3g031400 30.208 480 276 15 10 477 18 450 1.20e-53 187
MS.gene86114.t1 MTR_7g070660 26.923 494 309 12 10 476 11 479 1.63e-53 187
MS.gene86114.t1 MTR_5g072860 29.461 482 293 16 10 477 18 466 2.21e-53 186
MS.gene86114.t1 MTR_7g070860 26.923 494 304 14 6 476 3 462 2.21e-53 187
MS.gene86114.t1 MTR_7g070910 27.944 501 310 14 5 476 6 484 4.25e-53 186
MS.gene86114.t1 MTR_4g485630 25.873 487 327 9 6 476 5 473 2.91e-52 184
MS.gene86114.t1 MTR_6g033725 30.659 349 217 8 132 472 126 457 4.09e-52 183
MS.gene86114.t1 MTR_5g045960 27.135 527 296 17 4 481 3 490 5.29e-52 183
MS.gene86114.t1 MTR_7g070930 27.490 502 311 14 5 476 9 487 6.06e-52 183
MS.gene86114.t1 MTR_8g027870 28.629 496 288 15 9 479 17 471 6.18e-52 183
MS.gene86114.t1 MTR_5g098960 27.646 463 281 14 7 452 4 429 2.14e-51 181
MS.gene86114.t1 MTR_7g070740 26.693 502 314 14 5 476 6 483 2.23e-51 182
MS.gene86114.t1 MTR_4g008630 28.221 489 285 16 12 476 16 462 2.45e-51 181
MS.gene86114.t1 MTR_7g102490 28.713 505 305 13 8 479 7 489 2.57e-51 182
MS.gene86114.t1 MTR_5g072830 27.235 481 294 13 10 476 10 448 2.91e-51 180
MS.gene86114.t1 MTR_0184s0030 27.310 487 295 12 10 469 6 460 3.77e-51 181
MS.gene86114.t1 MTR_8g027885 28.169 497 289 15 9 479 17 471 1.22e-50 179
MS.gene86114.t1 MTR_7g117405 30.196 510 282 20 6 477 8 481 2.52e-50 179
MS.gene86114.t1 MTR_7g070780 27.218 496 309 15 10 476 11 483 3.13e-50 179
MS.gene86114.t1 MTR_4g108250 27.734 512 300 16 5 476 6 487 3.27e-50 179
MS.gene86114.t1 MTR_5g072840 27.386 482 294 13 10 477 10 449 3.55e-50 177
MS.gene86114.t1 MTR_7g117170 28.862 492 274 17 9 465 14 464 6.23e-50 177
MS.gene86114.t1 MTR_8g009050 30.688 378 217 9 117 472 108 462 8.67e-50 177
MS.gene86114.t1 MTR_8g009063 27.129 505 302 14 3 479 6 472 8.75e-50 177
MS.gene86114.t1 MTR_0184s0040 28.169 497 288 14 10 475 21 479 1.04e-49 177
MS.gene86114.t1 MTR_0078s0190 28.169 497 288 14 10 475 21 479 1.04e-49 177
MS.gene86114.t1 MTR_8g009055 29.150 494 292 16 10 479 6 465 1.05e-49 177
MS.gene86114.t1 MTR_6g033660 29.972 357 208 9 132 472 129 459 1.49e-49 176
MS.gene86114.t1 MTR_6g033625 32.778 360 211 12 132 481 129 467 1.98e-49 176
MS.gene86114.t1 MTR_6g033615 31.897 348 201 9 136 474 128 448 3.50e-49 175
MS.gene86114.t1 MTR_8g009073 28.257 499 288 15 10 479 6 463 6.94e-49 174
MS.gene86114.t1 MTR_6g005600 29.150 494 281 18 8 469 4 460 1.52e-48 174
MS.gene86114.t1 MTR_1g019510 28.916 498 285 15 10 479 6 462 1.56e-48 173
MS.gene86114.t1 MTR_8g006710 28.884 502 280 20 6 472 2 461 1.84e-48 173
MS.gene86114.t1 MTR_5g072820 27.651 481 292 14 10 476 10 448 2.27e-48 172
MS.gene86114.t1 MTR_8g008990 29.032 496 292 15 10 479 6 467 5.66e-48 172
MS.gene86114.t1 MTR_4g024020 28.571 518 294 13 8 481 7 492 2.76e-47 171
MS.gene86114.t1 MTR_8g009067 29.787 376 223 9 117 473 108 461 2.88e-47 170
MS.gene86114.t1 MTR_8g009067 30.084 359 210 9 134 473 7 343 1.51e-46 165
MS.gene86114.t1 MTR_8g008970 27.902 491 290 16 10 472 6 460 1.86e-46 172
MS.gene86114.t1 MTR_8g008970 33.333 273 155 7 215 479 534 787 1.03e-34 138
MS.gene86114.t1 MTR_7g070940 27.613 507 292 19 6 476 5 472 3.42e-46 167
MS.gene86114.t1 MTR_5g045970 27.219 507 301 17 10 477 16 493 3.96e-46 167
MS.gene86114.t1 MTR_5g087620 26.834 518 314 20 1 477 1 494 4.17e-46 167
MS.gene86114.t1 MTR_7g046490 31.593 364 205 10 130 473 121 460 5.84e-46 166
MS.gene86114.t1 MTR_6g023665 27.677 495 292 15 7 472 10 467 9.43e-46 166
MS.gene86114.t1 MTR_8g009073 32.584 356 195 11 143 479 5 334 1.10e-45 162
MS.gene86114.t1 MTR_7g102560 28.000 500 304 18 10 477 9 484 1.39e-45 166
MS.gene86114.t1 MTR_1g062380 26.214 515 297 18 10 477 16 494 2.76e-45 165
MS.gene86114.t1 MTR_1g029540 26.804 485 288 18 15 476 19 459 4.05e-45 164
MS.gene86114.t1 MTR_8g006730 27.655 499 291 20 6 472 2 462 4.74e-45 164
MS.gene86114.t1 MTR_7g102460 27.789 511 300 17 8 479 7 487 4.81e-45 165
MS.gene86114.t1 MTR_8g066610 26.680 491 314 13 10 476 9 477 6.56e-45 164
MS.gene86114.t1 MTR_0078s0010 27.083 480 281 15 7 455 3 444 9.71e-45 163
MS.gene86114.t1 MTR_7g102550 27.485 513 309 15 1 477 1 486 9.94e-45 164
MS.gene86114.t1 MTR_8g006260 27.479 484 276 16 8 455 4 448 1.35e-44 163
MS.gene86114.t1 MTR_7g070810 26.052 499 297 16 14 476 13 475 1.36e-44 163
MS.gene86114.t1 MTR_6g488280 26.166 493 292 16 12 472 8 460 1.84e-44 162
MS.gene86114.t1 MTR_0428s0010 26.166 493 292 16 12 472 8 460 1.84e-44 162
MS.gene86114.t1 MTR_7g047030 27.122 483 277 15 7 455 3 444 2.74e-44 162
MS.gene86114.t1 MTR_7g047270 27.122 483 277 15 7 455 3 444 2.74e-44 162
MS.gene86114.t1 MTR_6g033675 25.726 482 310 13 12 472 6 460 5.53e-44 161
MS.gene86114.t1 MTR_4g031800 26.210 496 293 14 13 473 12 469 6.21e-44 161
MS.gene86114.t1 MTR_5g090670 26.706 513 301 15 7 479 2 479 6.61e-44 161
MS.gene86114.t1 MTR_5g090700 26.719 509 302 16 7 477 2 477 1.94e-43 160
MS.gene86114.t1 MTR_5g067170 27.642 492 300 15 14 476 15 479 2.28e-43 160
MS.gene86114.t1 MTR_8g090095 26.186 485 300 15 15 476 30 479 2.65e-42 157
MS.gene86114.t1 MTR_8g077590 29.250 400 234 11 75 452 70 442 5.84e-42 155
MS.gene86114.t1 MTR_5g090660 25.697 502 312 16 7 477 2 473 6.23e-42 157
MS.gene86114.t1 MTR_8g465670 28.200 500 290 17 7 473 4 467 1.10e-41 155
MS.gene86114.t1 MTR_2g035020 26.962 497 299 18 14 476 15 481 1.11e-41 155
MS.gene86114.t1 MTR_4g128720 25.773 485 304 12 7 476 12 455 1.91e-41 154
MS.gene86114.t1 MTR_5g070090 26.955 486 309 14 6 476 7 461 2.04e-41 154
MS.gene86114.t1 MTR_8g012650 31.507 365 201 10 117 455 109 450 3.56e-41 154
MS.gene86114.t1 MTR_5g090630 26.253 499 306 14 7 477 2 466 5.47e-41 153
MS.gene86114.t1 MTR_5g040030 24.145 497 320 11 12 476 16 487 6.22e-41 153
MS.gene86114.t1 MTR_8g012745 28.398 412 235 12 83 470 87 462 1.14e-40 152
MS.gene86114.t1 MTR_8g006270 26.613 496 301 15 7 475 3 462 2.00e-40 151
MS.gene86114.t1 MTR_7g071050 25.358 489 251 14 5 456 8 419 2.06e-40 150
MS.gene86114.t1 MTR_4g117890 26.518 494 290 14 14 473 17 471 2.06e-40 152
MS.gene86114.t1 MTR_4g128690 28.033 478 293 14 10 476 15 452 3.75e-40 150
MS.gene86114.t1 MTR_5g090620 24.704 506 307 15 7 473 2 472 4.99e-40 150
MS.gene86114.t1 MTR_0009s0240 26.899 487 305 19 5 473 2 455 5.35e-40 150
MS.gene86114.t1 MTR_2g034990 26.869 495 302 17 14 476 15 481 6.98e-40 150
MS.gene86114.t1 MTR_0078s0060 26.722 479 277 14 10 455 6 443 9.53e-40 149
MS.gene86114.t1 MTR_8g012635 30.151 398 219 12 83 455 87 450 9.61e-40 149
MS.gene86114.t1 MTR_5g019580 25.882 510 307 19 4 475 1 477 1.30e-39 149
MS.gene86114.t1 MTR_4g485620 26.294 483 295 17 24 476 3 454 1.69e-39 149
MS.gene86114.t1 MTR_8g007565 28.009 457 289 16 10 450 7 439 2.01e-39 149
MS.gene86114.t1 MTR_5g016660 24.752 505 315 16 8 476 8 483 2.27e-39 149
MS.gene86114.t1 MTR_8g007650 28.009 457 289 16 10 450 7 439 3.49e-39 148
MS.gene86114.t1 MTR_0536s0020 26.230 488 305 11 14 476 22 479 1.64e-38 146
MS.gene86114.t1 MTR_6g042310 28.884 457 279 18 10 453 18 441 3.32e-38 145
MS.gene86114.t1 MTR_8g071070 26.337 505 309 18 4 480 1 470 3.46e-38 145
MS.gene86114.t1 MTR_5g090580 24.852 507 312 15 7 477 2 475 3.58e-38 145
MS.gene86114.t1 MTR_5g004940 34.454 238 137 5 243 476 155 377 3.60e-38 144
MS.gene86114.t1 MTR_4g117960 26.337 505 301 19 14 481 15 485 3.71e-38 145
MS.gene86114.t1 MTR_4g118000 26.680 491 292 15 14 476 16 466 3.90e-38 145
MS.gene86114.t1 MTR_3g009510 26.008 496 306 13 12 474 7 474 4.10e-38 145
MS.gene86114.t1 MTR_5g070040 28.866 485 298 18 7 473 8 463 4.78e-38 145
MS.gene86114.t1 MTR_8g074550 25.977 512 299 17 10 474 8 486 6.14e-38 145
MS.gene86114.t1 MTR_5g098930 25.049 507 304 14 7 477 2 468 8.83e-38 144
MS.gene86114.t1 MTR_7g102520 26.786 504 307 20 10 477 12 489 8.88e-38 145
MS.gene86114.t1 MTR_7g012120 26.613 496 299 19 14 476 20 483 1.02e-37 144
MS.gene86114.t1 MTR_5g066410 26.786 448 285 12 13 450 1 415 1.04e-37 143
MS.gene86114.t1 MTR_5g090600 26.369 493 301 15 7 477 2 454 1.08e-37 144
MS.gene86114.t1 MTR_5g039900 24.694 490 323 15 12 476 15 483 3.20e-37 143
MS.gene86114.t1 MTR_1g040310 25.971 489 318 16 11 476 16 483 4.74e-37 142
MS.gene86114.t1 MTR_2g098430 25.458 491 297 15 7 462 3 459 4.78e-37 142
MS.gene86114.t1 MTR_8g012630 39.062 192 97 4 284 455 203 394 5.07e-37 141
MS.gene86114.t1 MTR_5g019580 31.034 290 160 10 215 475 223 501 1.19e-36 142
MS.gene86114.t1 MTR_5g029800 27.273 495 296 17 14 476 15 477 1.48e-36 141
MS.gene86114.t1 MTR_8g012730 39.683 189 94 4 287 455 99 287 2.54e-36 136
MS.gene86114.t1 MTR_5g090610 25.349 501 295 17 7 473 2 457 2.59e-36 140
MS.gene86114.t1 MTR_4g117950 27.381 504 276 20 13 476 9 462 2.65e-36 140
MS.gene86114.t1 MTR_7g067120 28.200 461 257 18 7 453 6 406 5.55e-36 138
MS.gene86114.t1 MTR_7g067330 27.826 460 260 17 7 453 6 406 5.77e-36 138
MS.gene86114.t1 MTR_2g008226 27.389 471 302 17 1 454 1 448 5.78e-36 139
MS.gene86114.t1 MTR_1g019520 36.715 207 114 4 283 472 2 208 6.10e-36 133
MS.gene86114.t1 MTR_6g035295 25.100 498 313 17 12 476 14 484 8.16e-36 139
MS.gene86114.t1 MTR_7g470610 30.100 299 175 7 129 423 5 273 3.51e-35 133
MS.gene86114.t1 MTR_7g070583 30.100 299 175 7 129 423 5 273 3.51e-35 133
MS.gene86114.t1 MTR_2g035040 26.410 390 237 11 120 481 24 391 4.21e-35 135
MS.gene86114.t1 MTR_6g035185 24.498 498 313 16 13 476 14 482 4.40e-35 137
MS.gene86114.t1 MTR_8g006220 27.992 493 266 20 7 452 3 453 6.91e-35 136
MS.gene86114.t1 MTR_4g485640 29.487 312 185 11 187 474 364 664 1.42e-34 137
MS.gene86114.t1 MTR_4g123553 26.998 463 291 19 5 453 9 438 5.10e-34 134
MS.gene86114.t1 MTR_8g044140 27.132 387 226 13 121 476 87 448 5.11e-34 133
MS.gene86114.t1 MTR_4g082820 27.551 490 297 17 10 475 7 462 7.78e-34 133
MS.gene86114.t1 MTR_7g070870 25.410 488 287 18 14 476 23 458 7.96e-34 133
MS.gene86114.t1 MTR_2g046820 27.749 382 224 10 118 476 110 462 8.11e-34 133
MS.gene86114.t1 MTR_6g035265 25.502 498 297 18 14 476 15 473 1.98e-33 132
MS.gene86114.t1 MTR_2g046750 24.798 496 313 12 8 476 3 465 2.25e-33 132
MS.gene86114.t1 MTR_4g117980 24.900 502 303 17 14 476 15 481 4.51e-33 131
MS.gene86114.t1 MTR_2g059240 25.257 487 325 15 6 478 9 470 6.35e-33 130
MS.gene86114.t1 MTR_4g485590 27.059 425 243 17 10 419 9 381 1.44e-32 128
MS.gene86114.t1 MTR_6g078320 25.506 494 314 16 10 475 11 478 5.28e-32 128
MS.gene86114.t1 MTR_2g040530 26.455 378 234 9 118 476 112 464 4.14e-31 125
MS.gene86114.t1 MTR_4g082810 27.961 304 188 9 119 409 110 395 5.62e-31 124
MS.gene86114.t1 MTR_5g072850 30.851 282 165 9 157 432 90 347 1.79e-30 122
MS.gene86114.t1 MTR_0536s0010 25.948 501 292 17 13 480 24 478 2.54e-30 123
MS.gene86114.t1 MTR_8g466240 25.558 493 298 18 8 476 6 453 1.11e-29 121
MS.gene86114.t1 MTR_8g032950 23.553 501 313 16 12 476 14 480 1.32e-29 121
MS.gene86114.t1 MTR_2g008225 25.532 470 293 17 5 453 10 443 4.08e-29 119
MS.gene86114.t1 MTR_7g039550 30.833 240 150 4 252 476 23 261 4.49e-29 115
MS.gene86114.t1 MTR_2g046620 25.157 477 282 17 5 453 10 439 4.69e-29 119
MS.gene86114.t1 MTR_8g068340 24.726 457 306 14 10 452 12 444 1.18e-28 118
MS.gene86114.t1 MTR_6g036650 25.424 472 298 17 3 453 10 448 1.43e-28 118
MS.gene86114.t1 MTR_1g107325 41.085 129 70 1 354 476 224 352 2.02e-28 116
MS.gene86114.t1 MTR_7g080960 23.725 510 307 19 5 477 7 471 6.22e-28 116
MS.gene86114.t1 MTR_5g027210 30.242 248 148 7 220 442 205 452 6.76e-28 116
MS.gene86114.t1 MTR_0475s0030 72.308 65 18 0 369 433 11 75 1.46e-27 106
MS.gene86114.t1 MTR_8g068360 24.894 470 288 18 10 452 12 443 1.71e-27 115
MS.gene86114.t1 MTR_8g009840 35.000 200 104 6 300 479 331 524 4.91e-27 114
MS.gene86114.t1 MTR_2g008220 25.636 472 302 19 1 453 1 442 6.76e-27 113
MS.gene86114.t1 MTR_3g009490 31.892 185 104 5 311 474 3 186 3.72e-26 105
MS.gene86114.t1 MTR_8g068330 24.681 470 290 17 10 452 8 440 6.14e-26 110
MS.gene86114.t1 MTR_7g070760 30.964 197 101 4 229 419 34 201 1.48e-25 104
MS.gene86114.t1 MTR_3g435310 34.286 175 102 5 287 453 228 397 1.51e-25 108
MS.gene86114.t1 MTR_7g070995 35.294 136 74 2 355 476 9 144 1.66e-23 97.1
MS.gene86114.t1 MTR_5g090690 27.273 319 170 10 82 387 36 305 1.52e-22 99.8
MS.gene86114.t1 MTR_4g077960 24.944 445 292 17 20 453 2 415 5.20e-22 98.6
MS.gene86114.t1 MTR_1g090270 23.237 482 286 17 6 453 11 442 1.50e-20 94.4
MS.gene86114.t1 MTR_8g056740 30.460 174 110 4 283 450 166 334 1.53e-18 87.8
MS.gene86114.t1 MTR_0078s0200 24.699 332 208 8 10 331 6 305 1.60e-18 86.7
MS.gene86114.t1 MTR_0536s0030 33.088 136 77 2 355 476 216 351 2.51e-18 86.7
MS.gene86114.t1 MTR_6g013970 55.556 81 27 3 127 202 39 115 3.17e-17 80.9
MS.gene86114.t1 MTR_4g079250 27.350 234 152 8 259 481 236 462 9.45e-17 82.8
MS.gene86114.t1 MTR_4g059370 28.889 180 115 5 287 453 190 369 1.01e-15 79.3
MS.gene86114.t1 MTR_4g079270 28.272 191 125 5 273 453 247 435 1.86e-15 79.0
MS.gene86114.t1 MTR_8g006230 27.686 242 146 8 118 354 52 269 8.63e-14 72.0
MS.gene86114.t1 MTR_1g090280 28.395 162 103 5 305 453 131 292 2.38e-13 71.2
MS.gene86114.t1 MTR_6g015160 50.943 53 25 1 371 422 30 82 7.31e-13 64.7
MS.gene86114.t1 MTR_2g014900 26.163 172 114 5 287 447 258 427 1.09e-12 70.1
MS.gene86114.t1 MTR_2g083480 29.050 179 116 5 285 458 257 429 1.95e-12 69.3
MS.gene86114.t1 MTR_2g083430 27.869 183 122 5 281 453 253 435 3.66e-12 68.6
MS.gene86114.t1 MTR_7g106850 72.973 37 9 1 15 50 144 180 3.74e-12 65.5
MS.gene86114.t1 MTR_5g058330 54.237 59 26 1 211 268 11 69 1.46e-11 60.8
MS.gene86114.t1 MTR_8g028755 28.916 166 85 5 281 445 97 230 1.98e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene86114.t1 AT1G22360 57.261 482 203 3 1 480 1 481 0.0 590
MS.gene86114.t1 AT1G22340 55.672 476 207 4 7 479 10 484 0.0 575
MS.gene86114.t1 AT1G22360 56.224 482 196 4 1 480 1 469 0.0 571
MS.gene86114.t1 AT1G22380 54.832 476 212 3 7 480 10 484 0.0 565
MS.gene86114.t1 AT1G22400 53.862 479 217 4 6 481 9 486 0.0 559
MS.gene86114.t1 AT1G22370 56.067 478 202 4 5 480 8 479 0.0 556
MS.gene86114.t1 AT1G78270 52.610 479 222 5 2 477 5 481 0.0 528
MS.gene86114.t1 AT1G22370 55.446 303 133 2 180 480 7 309 4.85e-117 346
MS.gene86114.t1 AT5G59590 33.613 476 271 11 7 473 7 446 5.93e-86 271
MS.gene86114.t1 AT5G59580 34.034 476 266 14 8 473 7 444 2.75e-84 267
MS.gene86114.t1 AT3G46670 32.979 470 276 11 10 473 9 445 7.39e-83 263
MS.gene86114.t1 AT5G38010 32.790 491 273 14 1 474 1 451 9.45e-81 258
MS.gene86114.t1 AT3G46660 34.110 472 266 15 12 473 16 452 1.77e-80 257
MS.gene86114.t1 AT3G11340 31.013 474 288 11 8 477 7 445 1.21e-77 249
MS.gene86114.t1 AT2G36970 31.124 498 293 14 1 476 1 470 3.97e-77 249
MS.gene86114.t1 AT3G55700 33.193 476 274 15 12 477 10 451 2.18e-76 247
MS.gene86114.t1 AT3G21560 31.313 495 286 14 9 479 11 475 1.96e-75 245
MS.gene86114.t1 AT5G05900 31.501 473 279 11 10 473 8 444 1.49e-74 242
MS.gene86114.t1 AT3G46680 31.381 478 278 12 8 473 7 446 1.50e-74 242
MS.gene86114.t1 AT3G46690 32.558 473 283 13 7 474 6 447 2.14e-74 241
MS.gene86114.t1 AT5G38040 31.545 466 274 12 18 474 18 447 9.62e-74 239
MS.gene86114.t1 AT3G46650 30.573 471 269 12 8 471 8 427 2.67e-73 238
MS.gene86114.t1 AT5G05860 31.368 475 286 11 10 478 9 449 2.08e-72 236
MS.gene86114.t1 AT3G46720 32.495 477 265 14 8 473 7 437 3.27e-72 236
MS.gene86114.t1 AT4G15490 30.707 495 295 14 6 480 4 470 4.82e-72 236
MS.gene86114.t1 AT5G05870 31.303 476 289 9 10 476 8 454 5.36e-72 236
MS.gene86114.t1 AT2G28080 32.427 478 286 13 14 479 22 474 1.81e-71 234
MS.gene86114.t1 AT4G15500 31.762 488 282 14 9 477 8 463 4.52e-71 233
MS.gene86114.t1 AT3G46700 31.198 484 272 17 8 476 7 444 7.40e-71 232
MS.gene86114.t1 AT5G05880 30.085 472 288 12 10 473 8 445 2.66e-68 225
MS.gene86114.t1 AT5G05890 31.224 474 284 12 10 473 8 449 8.85e-68 224
MS.gene86114.t1 AT3G02100 30.675 489 290 16 1 473 1 456 2.50e-67 223
MS.gene86114.t1 AT4G15480 30.579 484 295 13 10 476 19 478 6.04e-67 223
MS.gene86114.t1 AT1G05680 30.380 474 294 11 10 477 6 449 9.26e-67 221
MS.gene86114.t1 AT1G05675 30.252 476 288 11 10 473 6 449 2.55e-66 220
MS.gene86114.t1 AT3G55710 32.917 480 274 18 12 477 10 455 6.30e-66 219
MS.gene86114.t1 AT2G31750 29.498 478 301 12 8 477 6 455 1.80e-65 218
MS.gene86114.t1 AT2G31750 29.498 478 301 12 8 477 6 455 3.54e-65 218
MS.gene86114.t1 AT2G26480 28.866 485 292 14 7 479 5 448 9.68e-65 216
MS.gene86114.t1 AT2G43840 29.167 480 297 12 8 479 5 449 6.05e-64 214
MS.gene86114.t1 AT2G43840 28.958 480 298 12 8 479 5 449 6.14e-63 211
MS.gene86114.t1 AT2G23250 32.558 473 272 17 13 476 1 435 1.29e-62 210
MS.gene86114.t1 AT2G23260 31.762 488 290 17 1 478 1 455 4.43e-62 209
MS.gene86114.t1 AT2G43820 29.461 482 297 14 6 479 3 449 1.03e-61 208
MS.gene86114.t1 AT2G31790 29.959 484 287 13 7 473 5 453 1.60e-59 202
MS.gene86114.t1 AT1G05560 27.721 487 294 15 9 476 4 451 4.61e-59 202
MS.gene86114.t1 AT1G05560 27.721 487 294 15 9 476 54 501 1.08e-58 202
MS.gene86114.t1 AT4G01070 31.463 499 271 16 6 472 4 463 2.04e-58 200
MS.gene86114.t1 AT2G36790 32.277 505 276 18 10 477 13 488 9.87e-58 199
MS.gene86114.t1 AT2G36800 30.297 505 287 17 10 477 12 488 4.32e-57 197
MS.gene86114.t1 AT1G05530 28.425 489 295 17 8 477 3 455 1.96e-56 194
MS.gene86114.t1 AT2G15480 28.858 499 313 13 1 476 1 480 1.95e-55 192
MS.gene86114.t1 AT2G15490 29.293 495 298 13 10 476 7 477 3.67e-55 191
MS.gene86114.t1 AT2G15480 29.077 509 309 14 1 476 1 490 4.20e-55 192
MS.gene86114.t1 AT4G15550 29.532 491 292 16 9 475 12 472 1.13e-54 190
MS.gene86114.t1 AT2G15490 29.116 498 298 13 10 476 7 480 1.14e-54 190
MS.gene86114.t1 AT2G36780 28.427 496 307 15 10 477 14 489 4.42e-53 186
MS.gene86114.t1 AT2G36770 27.668 506 298 19 10 477 14 489 4.42e-53 186
MS.gene86114.t1 AT4G14090 28.660 485 298 17 3 475 6 454 5.44e-53 185
MS.gene86114.t1 AT4G34131 26.892 502 316 12 1 475 1 478 6.26e-53 186
MS.gene86114.t1 AT2G30140 29.046 482 292 15 6 476 9 451 1.25e-52 184
MS.gene86114.t1 AT2G30140 29.046 482 291 15 6 476 9 450 1.40e-52 184
MS.gene86114.t1 AT1G01420 31.034 493 274 16 9 472 7 462 6.21e-52 183
MS.gene86114.t1 AT1G01420 31.034 493 274 16 9 472 10 465 7.08e-52 183
MS.gene86114.t1 AT3G53150 26.419 511 317 12 7 477 19 510 8.70e-52 183
MS.gene86114.t1 AT3G53160 29.472 492 307 14 10 477 8 483 3.01e-51 181
MS.gene86114.t1 AT5G17050 26.987 478 315 12 6 477 8 457 3.54e-51 180
MS.gene86114.t1 AT1G24100 29.314 481 297 14 8 476 9 458 4.26e-51 180
MS.gene86114.t1 AT2G36760 28.350 515 283 20 10 477 14 489 8.03e-51 180
MS.gene86114.t1 AT5G26310 27.129 505 288 15 8 475 5 466 9.44e-51 180
MS.gene86114.t1 AT2G36750 27.634 503 301 21 10 477 10 484 4.94e-50 178
MS.gene86114.t1 AT1G30530 27.579 475 308 13 7 477 9 451 6.18e-50 177
MS.gene86114.t1 AT5G66690 27.006 511 281 18 8 475 5 466 4.24e-49 175
MS.gene86114.t1 AT2G16890 29.783 507 268 22 10 476 9 467 4.44e-49 175
MS.gene86114.t1 AT1G10400 29.278 485 298 16 8 475 5 461 7.20e-49 174
MS.gene86114.t1 AT2G30150 28.033 478 295 14 10 476 13 452 9.57e-49 174
MS.gene86114.t1 AT5G17030 25.887 479 318 11 6 477 8 456 4.33e-48 172
MS.gene86114.t1 AT3G50740 26.482 506 296 17 8 475 5 472 1.39e-47 171
MS.gene86114.t1 AT5G14860 29.762 504 281 21 10 476 8 475 1.71e-47 171
MS.gene86114.t1 AT1G01390 30.862 499 278 17 9 479 24 483 2.37e-47 171
MS.gene86114.t1 AT1G01390 30.862 499 278 17 9 479 7 466 3.01e-47 170
MS.gene86114.t1 AT2G30150 27.848 474 293 14 14 476 1 436 3.99e-47 169
MS.gene86114.t1 AT5G17040 26.371 474 305 11 10 477 5 440 5.20e-47 169
MS.gene86114.t1 AT5G17040 28.947 304 203 3 175 477 47 338 1.85e-45 162
MS.gene86114.t1 AT5G37950 30.769 377 220 14 25 394 1 343 1.45e-44 160
MS.gene86114.t1 AT4G34138 26.614 511 296 17 8 478 9 480 2.11e-44 162
MS.gene86114.t1 AT3G16520 28.997 369 226 12 118 474 113 457 3.39e-44 162
MS.gene86114.t1 AT5G03490 28.926 484 293 18 6 475 15 461 1.06e-43 160
MS.gene86114.t1 AT4G34135 27.711 498 308 13 6 475 7 480 2.09e-43 160
MS.gene86114.t1 AT3G16520 29.630 351 211 12 118 456 113 439 2.18e-43 159
MS.gene86114.t1 AT1G73880 30.539 501 285 21 3 477 4 467 2.92e-43 159
MS.gene86114.t1 AT3G16520 29.630 351 211 12 118 456 113 439 3.02e-43 159
MS.gene86114.t1 AT3G22250 27.368 475 275 15 7 449 5 441 5.55e-43 158
MS.gene86114.t1 AT4G36770 27.708 480 276 15 10 457 4 444 8.00e-43 158
MS.gene86114.t1 AT5G37950 30.851 376 215 14 25 394 1 337 4.24e-42 153
MS.gene86114.t1 AT5G65550 27.991 468 294 14 8 460 7 446 1.64e-41 154
MS.gene86114.t1 AT2G29710 26.411 496 306 18 7 477 2 463 2.77e-40 151
MS.gene86114.t1 AT1G51210 28.289 456 274 17 8 451 18 432 2.16e-39 148
MS.gene86114.t1 AT3G21790 27.112 509 291 13 12 476 6 478 7.11e-39 147
MS.gene86114.t1 AT3G21780 27.856 499 298 16 8 476 2 468 1.72e-38 146
MS.gene86114.t1 AT3G21800 26.210 496 308 13 12 476 7 475 2.04e-38 146
MS.gene86114.t1 AT3G21760 26.172 512 294 12 12 476 6 480 7.87e-38 144
MS.gene86114.t1 AT2G29740 27.218 496 305 16 6 473 4 471 2.30e-37 143
MS.gene86114.t1 AT1G07250 27.902 491 304 18 12 477 8 473 3.64e-37 142
MS.gene86114.t1 AT2G18560 30.744 309 170 10 187 469 79 369 5.66e-37 140
MS.gene86114.t1 AT1G07260 28.278 389 239 12 105 477 108 472 2.12e-36 140
MS.gene86114.t1 AT2G16890 27.646 463 250 20 10 434 9 424 2.91e-36 139
MS.gene86114.t1 AT5G49690 25.708 459 288 16 10 452 10 431 4.15e-36 139
MS.gene86114.t1 AT4G15280 28.088 502 300 16 8 477 2 474 7.75e-36 139
MS.gene86114.t1 AT4G15280 28.112 498 297 16 12 477 38 506 1.05e-35 139
MS.gene86114.t1 AT2G29730 24.802 504 304 17 7 477 2 463 1.95e-35 137
MS.gene86114.t1 AT2G18570 25.000 496 299 19 8 469 3 459 5.97e-35 136
MS.gene86114.t1 AT4G15260 31.250 288 165 7 212 477 79 355 6.81e-34 131
MS.gene86114.t1 AT3G21750 26.667 510 292 16 8 477 2 469 5.05e-33 131
MS.gene86114.t1 AT2G29750 25.755 497 306 17 12 477 10 474 4.14e-32 128
MS.gene86114.t1 AT1G07240 29.286 280 170 7 215 477 208 476 8.41e-31 124
MS.gene86114.t1 AT5G12890 26.654 529 295 22 1 480 1 485 1.13e-30 124
MS.gene86114.t1 AT2G22590 26.782 463 292 13 8 452 13 446 5.97e-29 119
MS.gene86114.t1 AT4G01070 29.912 341 185 13 6 331 4 305 2.17e-25 107
MS.gene86114.t1 AT4G34135 27.697 343 208 10 6 331 7 326 4.10e-22 97.4
MS.gene86114.t1 AT1G64910 26.840 462 271 20 10 453 6 418 3.31e-21 96.3
MS.gene86114.t1 AT1G06000 32.683 205 123 5 287 478 233 435 3.93e-21 95.9
MS.gene86114.t1 AT4G27570 23.696 460 297 18 8 453 5 424 6.57e-20 92.4
MS.gene86114.t1 AT4G27560 24.048 420 271 16 8 419 5 384 8.85e-19 89.0
MS.gene86114.t1 AT2G22930 23.859 482 302 15 10 476 6 437 2.62e-17 84.7
MS.gene86114.t1 AT3G29630 24.744 489 296 19 8 476 4 440 9.39e-17 82.8
MS.gene86114.t1 AT2G23210 26.174 298 189 11 1 296 1 269 1.04e-16 80.9
MS.gene86114.t1 AT5G53990 29.379 177 113 5 287 453 244 418 1.06e-16 82.8
MS.gene86114.t1 AT5G54010 23.913 460 296 18 8 458 4 418 4.60e-16 80.9
MS.gene86114.t1 AT4G09500 29.944 177 112 5 287 453 244 418 6.75e-16 80.1
MS.gene86114.t1 AT4G09500 29.944 177 112 5 287 453 219 393 7.20e-16 80.1
MS.gene86114.t1 AT3G29630 29.208 202 126 5 286 476 219 414 2.74e-15 78.2
MS.gene86114.t1 AT1G50580 24.464 466 282 19 8 453 4 419 4.81e-15 77.8
MS.gene86114.t1 AT5G54060 24.480 433 263 16 1 409 1 393 4.86e-14 74.7
MS.gene86114.t1 AT1G64920 29.282 181 112 6 287 453 244 422 7.35e-13 70.9

Find 105 sgRNAs with CRISPR-Local

Find 178 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGATGAATTTGTGGATTT+TGG 0.148483 6.3:+8965644 None:intergenic
TAAGTTCACAATAGGGTTTA+AGG 0.228983 6.3:+8967237 None:intergenic
AAGACATTGTTGACTTTATC+AGG 0.230929 6.3:-8965843 MS.gene86114:CDS
GCAAAGCTTCTTCACCTTAG+AGG 0.280905 6.3:-8967446 MS.gene86114:CDS
CCTAGTAATAAGTTCACAAT+AGG 0.312390 6.3:+8967229 None:intergenic
GAACTTGGACAAAGTGATTA+AGG 0.324980 6.3:-8965029 MS.gene86114:CDS
AGCTTTGCTAGTTTGAATAA+TGG 0.325197 6.3:+8967461 None:intergenic
ACAAAAGTAGATTGGATTCC+AGG 0.332750 6.3:-8965886 MS.gene86114:CDS
ATATGGCCTTGAACTGGATA+TGG 0.341554 6.3:+8967488 None:intergenic
AAATTCAACATAATATCATT+TGG 0.341744 6.3:+8965811 None:intergenic
AAAATCAGTCAAACCGTCTA+AGG 0.352517 6.3:+8967355 None:intergenic
GTGGACACCAACTTGCTATT+AGG 0.356812 6.3:+8965368 None:intergenic
ATTTGTAATGAATGGGAGAT+TGG 0.359619 6.3:-8965205 MS.gene86114:CDS
CCTATTGTGAACTTATTACT+AGG 0.362659 6.3:-8967229 MS.gene86114:CDS
TTATCTTACAAATGGATGTT+TGG 0.366166 6.3:-8965911 MS.gene86114:CDS
CCTAGTGGTGTTAGACCATC+TGG 0.366909 6.3:+8967317 None:intergenic
GTTTGAATAATGGATTGATA+TGG 0.370528 6.3:+8967471 None:intergenic
GTTTGGAAACAAAAGTAGAT+TGG 0.372644 6.3:-8965894 MS.gene86114:CDS
GCAAATGTTGGAATTTGCTT+GGG 0.375617 6.3:-8965500 MS.gene86114:CDS
TCCGTTGTTTATGTTAATTT+CGG 0.379062 6.3:-8965547 MS.gene86114:CDS
GTAGATTTATTTGTAATGAA+TGG 0.382641 6.3:-8965213 MS.gene86114:CDS
AGGTTATGTGAAAGCCTCTA+AGG 0.390826 6.3:+8967432 None:intergenic
AAATCCACAAATTCATCAAT+TGG 0.393774 6.3:-8965641 MS.gene86114:CDS
ACTCTTTAGATTCCAACCTT+TGG 0.394855 6.3:-8965618 MS.gene86114:CDS
GGTGTTGCTTAAACAAAATT+AGG 0.402028 6.3:-8965005 None:intergenic
TCAGAAACTAAGCAAGTAAC+TGG 0.402772 6.3:+8967182 None:intergenic
GTTGGAATTTGCTTGGGGTT+TGG 0.405650 6.3:-8965494 MS.gene86114:CDS
TAGATTTATTTGTAATGAAT+GGG 0.407079 6.3:-8965212 MS.gene86114:CDS
GAGTCCAATTGATGAATTTG+TGG 0.412904 6.3:+8965637 None:intergenic
AGTATCTTCTTTCCAAAGGT+TGG 0.414296 6.3:+8965606 None:intergenic
AGCAAATGTTGGAATTTGCT+TGG 0.422319 6.3:-8965501 MS.gene86114:CDS
GGTTTAATAATGAAGGTAAA+GGG 0.432184 6.3:+8965665 None:intergenic
CTAGTAATAAGTTCACAATA+GGG 0.446275 6.3:+8967230 None:intergenic
ATTAGGCCGGACCTTGTCAT+TGG 0.452933 6.3:-8965442 MS.gene86114:CDS
AGCAAATTCCAACATTTGCT+CGG 0.454558 6.3:+8965504 None:intergenic
GATGAGAGTTATCTTACAAA+TGG 0.462382 6.3:-8965919 MS.gene86114:CDS
TGGTTTAATAATGAAGGTAA+AGG 0.468725 6.3:+8965664 None:intergenic
GAATTGATGGTGGGAGAGAA+AGG 0.475632 6.3:-8965130 MS.gene86114:CDS
GGATTGATATGGCCTTGAAC+TGG 0.479128 6.3:+8967482 None:intergenic
AAGATACTGAGTGTCTTGAT+TGG 0.480832 6.3:-8965591 MS.gene86114:CDS
CAAATAAATCTACAGTCTGT+TGG 0.481604 6.3:+8965223 None:intergenic
ATGATTCCATATCCAGTTCA+AGG 0.483373 6.3:-8967494 MS.gene86114:CDS
AGGCCGGACCTTGTCATTGG+TGG 0.483422 6.3:-8965439 MS.gene86114:CDS
AACAACGGATCCCGGCTCCT+TGG 0.486045 6.3:+8965561 None:intergenic
GTCAAACCGTCTAAGGCATT+CGG 0.488489 6.3:+8967362 None:intergenic
CAAGCTGATCAATGAATTGA+TGG 0.489788 6.3:-8965143 MS.gene86114:CDS
GTGCAAATTCTTCAGCAGCT+TGG 0.489819 6.3:+8967138 None:intergenic
CTTACTGATTTACAAAGAGT+TGG 0.491674 6.3:+8967269 None:intergenic
TCTTGATTGGCTTGAATCCA+AGG 0.492781 6.3:-8965578 MS.gene86114:CDS
CATCAATTCATTGATCAGCT+TGG 0.495941 6.3:+8965144 None:intergenic
TGGTTCAACACTTTCTCTTG+TGG 0.496098 6.3:+8965349 None:intergenic
GAGCCACCAATGACAAGGTC+CGG 0.497625 6.3:+8965436 None:intergenic
GTAAACTTAGTACCTTTGAA+TGG 0.497967 6.3:+8967029 None:intergenic
TCCAGCGCATATGCTTTCAA+TGG 0.498870 6.3:+8965282 None:intergenic
GTCAAGAATCCGCCGATTGA+AGG 0.503038 6.3:+8965325 None:intergenic
TTGGCTTGAATCCAAGGAGC+CGG 0.504128 6.3:-8965572 MS.gene86114:CDS
GCAAATTCCAACATTTGCTC+GGG 0.504999 6.3:+8965505 None:intergenic
GCAAGTAACTGGTGGGACAT+TGG 0.523788 6.3:+8967193 None:intergenic
TAATGAATGGGAGATTGGTA+TGG 0.527344 6.3:-8965200 MS.gene86114:CDS
AATGAAGGTAAAGGGCCGAT+AGG 0.530778 6.3:+8965673 None:intergenic
GAATGTGAAGAGAGGGGAGT+TGG 0.531204 6.3:-8965167 MS.gene86114:CDS
GTGTTGAACCACCCTTCAAT+CGG 0.531273 6.3:-8965337 MS.gene86114:CDS
TTGATACGAATGTGAAGAGA+GGG 0.537755 6.3:-8965174 MS.gene86114:CDS
GATTCTTGACTCATTGTGGA+TGG 0.539523 6.3:-8965312 MS.gene86114:CDS
ATGAAGGTAAAGGGCCGATA+GGG 0.540303 6.3:+8965674 None:intergenic
ACCATTGAAAGCATATGCGC+TGG 0.543602 6.3:-8965283 MS.gene86114:CDS
TCAAGAATCCGCCGATTGAA+GGG 0.546732 6.3:+8965326 None:intergenic
TATGACACCCGAGCAAATGT+TGG 0.552021 6.3:-8965512 MS.gene86114:CDS
TGGCTTGAATCCAAGGAGCC+GGG 0.553822 6.3:-8965571 MS.gene86114:CDS
TGCAATGGAGTTGAAGAAGA+AGG 0.554838 6.3:-8965089 MS.gene86114:CDS
TTAACATAAACAACGGATCC+CGG 0.555991 6.3:+8965553 None:intergenic
GACGTTGAGGCAAAATGCAA+TGG 0.557209 6.3:-8965104 MS.gene86114:CDS
CTGGAGTGCCGATGTTGTGT+TGG 0.557220 6.3:-8965264 MS.gene86114:CDS
GGCGGATTCTTGACTCATTG+TGG 0.560659 6.3:-8965316 MS.gene86114:CDS
ACTCAGTATCTTCTTTCCAA+AGG 0.563526 6.3:+8965602 None:intergenic
TGGTTGTTCATACATGAACT+TGG 0.565181 6.3:-8965044 MS.gene86114:CDS
AGCTTTGAAACCATCCCAGA+TGG 0.571170 6.3:-8967332 MS.gene86114:CDS
CAAATGTTGGAATTTGCTTG+GGG 0.573887 6.3:-8965499 MS.gene86114:CDS
TGGTGTTAGACCATCTGGGA+TGG 0.585226 6.3:+8967322 None:intergenic
CCAGATGGTCTAACACCACT+AGG 0.586590 6.3:-8967317 MS.gene86114:CDS
ATTGATACGAATGTGAAGAG+AGG 0.589229 6.3:-8965175 MS.gene86114:CDS
AGAGGTCCGAATGCCTTAGA+CGG 0.593754 6.3:-8967368 MS.gene86114:CDS
ATTGTATTCAGTGTTAACAA+AGG 0.597303 6.3:+8967412 None:intergenic
AAACTAAGCAAGTAACTGGT+GGG 0.599605 6.3:+8967186 None:intergenic
AGAGGTATCATACCATTCAA+AGG 0.605847 6.3:-8967041 MS.gene86114:intron
AAACGCTTGCTCAAATCAAG+AGG 0.611360 6.3:-8967386 MS.gene86114:CDS
TTGAACCACCCTTCAATCGG+CGG 0.615937 6.3:-8965334 MS.gene86114:CDS
ATCGAGGCCTAATAGCAAGT+TGG 0.616022 6.3:-8965375 MS.gene86114:CDS
GCCGAAATTAACATAAACAA+CGG 0.626922 6.3:+8965546 None:intergenic
GAAACTAAGCAAGTAACTGG+TGG 0.629351 6.3:+8967185 None:intergenic
ACGAATGAAATTGCAGATCG+AGG 0.631021 6.3:-8965391 MS.gene86114:CDS
TGATACGAATGTGAAGAGAG+GGG 0.638426 6.3:-8965173 MS.gene86114:CDS
CTAGTGGTGTTAGACCATCT+GGG 0.639019 6.3:+8967318 None:intergenic
CTGATCAATGAATTGATGGT+GGG 0.642727 6.3:-8965139 MS.gene86114:CDS
TCACTGAGCCACCAATGACA+AGG 0.642748 6.3:+8965431 None:intergenic
GCACAAGAGAACACTAGACC+AGG 0.646679 6.3:-8965067 MS.gene86114:CDS
GCTGATCAATGAATTGATGG+TGG 0.656580 6.3:-8965140 MS.gene86114:CDS
GGTCTAACACCACTAGGTGA+TGG 0.656884 6.3:-8967311 MS.gene86114:CDS
TATGGAATCATCACAGCATG+TGG 0.657258 6.3:+8967506 None:intergenic
TTCATGTATGAACAACCACC+TGG 0.668591 6.3:+8965049 None:intergenic
AGAATCCGCCGATTGAAGGG+TGG 0.673563 6.3:+8965329 None:intergenic
CTAACATCACCATCACCTAG+TGG 0.680677 6.3:+8967302 None:intergenic
GAGAGAAAGGAAAGACGTTG+AGG 0.691399 6.3:-8965117 MS.gene86114:CDS
CTTGGACAAAGTGATTAAGG+AGG 0.711231 6.3:-8965026 MS.gene86114:CDS
CAAGAGAACACTAGACCAGG+TGG 0.735241 6.3:-8965064 MS.gene86114:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATATTATAATATTAAA+AGG + chr6.3:8965718-8965737 None:intergenic 0.0%
!! AAAATATTATAATATTAAAA+GGG + chr6.3:8965717-8965736 None:intergenic 0.0%
!! ATATATATATATATATATAT+AGG - chr6.3:8965608-8965627 MS.gene86114:CDS 0.0%
!! TATATATATATATATATATA+GGG - chr6.3:8965609-8965628 MS.gene86114:CDS 0.0%
!! TAATTAGAATATAAACAAAA+GGG + chr6.3:8965940-8965959 None:intergenic 10.0%
!! TATATATATATATATATAGG+GGG - chr6.3:8965839-8965858 MS.gene86114:CDS 10.0%
!! TTAATTAGAATATAAACAAA+AGG + chr6.3:8965941-8965960 None:intergenic 10.0%
!!! CATTTTTATAAGTATTATTA+AGG + chr6.3:8966137-8966156 None:intergenic 10.0%
!!! TATTTTTTAAAATTTAGGAA+GGG - chr6.3:8966363-8966382 MS.gene86114:intron 10.0%
!!! TTATTTTTTAAAATTTAGGA+AGG - chr6.3:8966362-8966381 MS.gene86114:intron 10.0%
!! AAATTCAACATAATATCATT+TGG + chr6.3:8966728-8966747 None:intergenic 15.0%
!! TAGATTTATTTGTAATGAAT+GGG - chr6.3:8967324-8967343 MS.gene86114:CDS 15.0%
!!! AATGAAAGTTTTTAATTTGA+CGG + chr6.3:8966524-8966543 None:intergenic 15.0%
!!! ATTTTTTAAAATTTAGGAAG+GGG - chr6.3:8966364-8966383 MS.gene86114:intron 15.0%
!!! TGTTTTAGTAAATTATAAGT+GGG + chr6.3:8965917-8965936 None:intergenic 15.0%
!! ATGAAAAATAGAGAACATTT+GGG + chr6.3:8965425-8965444 None:intergenic 20.0%
!! GTAGATTTATTTGTAATGAA+TGG - chr6.3:8967323-8967342 MS.gene86114:CDS 20.0%
!!! ACTTTTAAGGAAACAATATT+TGG - chr6.3:8966067-8966086 MS.gene86114:intron 20.0%
!!! GTAATAAAGACAAACTTTTA+AGG - chr6.3:8966054-8966073 MS.gene86114:intron 20.0%
!!! GTGTTTTAGTAAATTATAAG+TGG + chr6.3:8965918-8965937 None:intergenic 20.0%
! AAAAGAGAATGACATGTTTA+AGG - chr6.3:8966021-8966040 MS.gene86114:intron 25.0%
! AAATCCACAAATTCATCAAT+TGG - chr6.3:8966895-8966914 MS.gene86114:intron 25.0%
! AATATGTCAATACTTACTCT+TGG + chr6.3:8966331-8966350 None:intergenic 25.0%
! AATGAGTGTAAATAATCAAG+TGG - chr6.3:8966153-8966172 MS.gene86114:intron 25.0%
! ATGAGTGTAAATAATCAAGT+GGG - chr6.3:8966154-8966173 MS.gene86114:intron 25.0%
! ATTGTATTCAGTGTTAACAA+AGG + chr6.3:8965127-8965146 None:intergenic 25.0%
! CTAGTAATAAGTTCACAATA+GGG + chr6.3:8965309-8965328 None:intergenic 25.0%
! GATGAAAAATAGAGAACATT+TGG + chr6.3:8965426-8965445 None:intergenic 25.0%
! GCATATAGTTGAAATACTTT+CGG + chr6.3:8966424-8966443 None:intergenic 25.0%
! GGTTTAATAATGAAGGTAAA+GGG + chr6.3:8966874-8966893 None:intergenic 25.0%
! GTAAAAAGAAGGAATTATAG+AGG + chr6.3:8966843-8966862 None:intergenic 25.0%
! TCCGTTGTTTATGTTAATTT+CGG - chr6.3:8966989-8967008 MS.gene86114:intron 25.0%
! TGGTTTAATAATGAAGGTAA+AGG + chr6.3:8966875-8966894 None:intergenic 25.0%
! TTATCTTACAAATGGATGTT+TGG - chr6.3:8966625-8966644 MS.gene86114:intron 25.0%
! TTCATACACACACATATATA+AGG + chr6.3:8966559-8966578 None:intergenic 25.0%
!! AATATTTGGAATGATGAAAG+TGG - chr6.3:8966081-8966100 MS.gene86114:intron 25.0%
!! ACAATTTTATTGTTTCATCC+AGG + chr6.3:8965693-8965712 None:intergenic 25.0%
!! ACTTGCACCTTAATAATTTT+AGG - chr6.3:8966189-8966208 MS.gene86114:intron 25.0%
!! ATATTTGGAATGATGAAAGT+GGG - chr6.3:8966082-8966101 MS.gene86114:intron 25.0%
!! ATTGATGAATTTGTGGATTT+TGG + chr6.3:8966895-8966914 None:intergenic 25.0%
!! GATTTTTACACACATACTTT+CGG + chr6.3:8966300-8966319 None:intergenic 25.0%
!!! GGATTTTGGTTTAATAATGA+AGG + chr6.3:8966881-8966900 None:intergenic 25.0%
!!! GTTTGAATAATGGATTGATA+TGG + chr6.3:8965068-8965087 None:intergenic 25.0%
AACGAAAGTTAATTGCTTGA+AGG + chr6.3:8966582-8966601 None:intergenic 30.0%
AACTGTCAATACTTACTCTT+GGG + chr6.3:8966273-8966292 None:intergenic 30.0%
ACACCCACCTAAAATTATTA+AGG + chr6.3:8966199-8966218 None:intergenic 30.0%
ATTTGTAATGAATGGGAGAT+TGG - chr6.3:8967331-8967350 MS.gene86114:CDS 30.0%
CAAAAATGGTTTCTTGCAAT+TGG + chr6.3:8967068-8967087 None:intergenic 30.0%
CAAATAAATCTACAGTCTGT+TGG + chr6.3:8967316-8967335 None:intergenic 30.0%
CCTAGTAATAAGTTCACAAT+AGG + chr6.3:8965310-8965329 None:intergenic 30.0%
CCTATTGTGAACTTATTACT+AGG - chr6.3:8965307-8965326 MS.gene86114:CDS 30.0%
GACACCAAAAATCTTAAAAC+CGG + chr6.3:8965671-8965690 None:intergenic 30.0%
GATGAGAGTTATCTTACAAA+TGG - chr6.3:8966617-8966636 MS.gene86114:intron 30.0%
GCCGAAATTAACATAAACAA+CGG + chr6.3:8966993-8967012 None:intergenic 30.0%
GTAAACTTAGTACCTTTGAA+TGG + chr6.3:8965510-8965529 None:intergenic 30.0%
GTTTGGAAACAAAAGTAGAT+TGG - chr6.3:8966642-8966661 MS.gene86114:intron 30.0%
TAAGTTCACAATAGGGTTTA+AGG + chr6.3:8965302-8965321 None:intergenic 30.0%
TATATATATATCCACTGAGC+CGG - chr6.3:8965649-8965668 MS.gene86114:CDS 30.0%
TTCCAGGTTTGAAAAACTTT+CGG - chr6.3:8966666-8966685 MS.gene86114:intron 30.0%
! AGCTTTGCTAGTTTGAATAA+TGG + chr6.3:8965078-8965097 None:intergenic 30.0%
! ATTCCTTCTTTTTACCCTAT+CGG - chr6.3:8966848-8966867 MS.gene86114:intron 30.0%
! TGCACCTTAATAATTTTAGG+TGG - chr6.3:8966192-8966211 MS.gene86114:intron 30.0%
! TTTCGATCTTTTGTAGAAAG+AGG - chr6.3:8965477-8965496 MS.gene86114:CDS 30.0%
!! AACCATTTTTGTGGATCATT+AGG - chr6.3:8967077-8967096 MS.gene86114:CDS 30.0%
!! AAGACATTGTTGACTTTATC+AGG - chr6.3:8966693-8966712 MS.gene86114:intron 30.0%
!! ATTGCAAGAAACCATTTTTG+TGG - chr6.3:8967068-8967087 MS.gene86114:CDS 30.0%
!! CTTACTGATTTACAAAGAGT+TGG + chr6.3:8965270-8965289 None:intergenic 30.0%
!! GCACCTTAATAATTTTAGGT+GGG - chr6.3:8966193-8966212 MS.gene86114:intron 30.0%
!!! TTTTAAGATTTTTGGTGTCC+TGG - chr6.3:8965672-8965691 MS.gene86114:CDS 30.0%
AAAAATGGCCAACACAACAT+CGG + chr6.3:8967283-8967302 None:intergenic 35.0%
AAAATCAGTCAAACCGTCTA+AGG + chr6.3:8965184-8965203 None:intergenic 35.0%
AAACTAAGCAAGTAACTGGT+GGG + chr6.3:8965353-8965372 None:intergenic 35.0%
AAGATACTGAGTGTCTTGAT+TGG - chr6.3:8966945-8966964 MS.gene86114:intron 35.0%
ACAAAAGTAGATTGGATTCC+AGG - chr6.3:8966650-8966669 MS.gene86114:intron 35.0%
ACTCAGTATCTTCTTTCCAA+AGG + chr6.3:8966937-8966956 None:intergenic 35.0%
ACTCTTTAGATTCCAACCTT+TGG - chr6.3:8966918-8966937 MS.gene86114:intron 35.0%
ACTGTCAATACTTACTCTTG+GGG + chr6.3:8966272-8966291 None:intergenic 35.0%
AGCAAATTCCAACATTTGCT+CGG + chr6.3:8967035-8967054 None:intergenic 35.0%
AGTATCTTCTTTCCAAAGGT+TGG + chr6.3:8966933-8966952 None:intergenic 35.0%
ATGATTCCATATCCAGTTCA+AGG - chr6.3:8965042-8965061 MS.gene86114:CDS 35.0%
ATTGATACGAATGTGAAGAG+AGG - chr6.3:8967361-8967380 MS.gene86114:CDS 35.0%
CAACTGTCAATACTTACTCT+TGG + chr6.3:8966274-8966293 None:intergenic 35.0%
CAAGCTGATCAATGAATTGA+TGG - chr6.3:8967393-8967412 MS.gene86114:CDS 35.0%
CATCAATTCATTGATCAGCT+TGG + chr6.3:8967395-8967414 None:intergenic 35.0%
GAACTTGGACAAAGTGATTA+AGG - chr6.3:8967507-8967526 MS.gene86114:CDS 35.0%
GAGTCCAATTGATGAATTTG+TGG + chr6.3:8966902-8966921 None:intergenic 35.0%
GTAAATAATCAAGTGGGTGT+AGG - chr6.3:8966160-8966179 MS.gene86114:intron 35.0%
TAATGAATGGGAGATTGGTA+TGG - chr6.3:8967336-8967355 MS.gene86114:CDS 35.0%
TCAGAAACTAAGCAAGTAAC+TGG + chr6.3:8965357-8965376 None:intergenic 35.0%
TGGTTGTTCATACATGAACT+TGG - chr6.3:8967492-8967511 MS.gene86114:CDS 35.0%
TTAACATAAACAACGGATCC+CGG + chr6.3:8966986-8967005 None:intergenic 35.0%
TTGATACGAATGTGAAGAGA+GGG - chr6.3:8967362-8967381 MS.gene86114:CDS 35.0%
! ACTTGCACCTTAGTGTTTTT+AGG - chr6.3:8966228-8966247 MS.gene86114:intron 35.0%
! ACTTGCACCTTAGTGTTTTT+AGG + chr6.3:8966247-8966228 None:intergenic 35.0%
! AGCAAATGTTGGAATTTGCT+TGG - chr6.3:8967035-8967054 MS.gene86114:intron 35.0%
! ATTTTTGTGGATCATTAGGC+CGG - chr6.3:8967081-8967100 MS.gene86114:CDS 35.0%
! CAAATGTTGGAATTTGCTTG+GGG - chr6.3:8967037-8967056 MS.gene86114:intron 35.0%
! CTGATCAATGAATTGATGGT+GGG - chr6.3:8967397-8967416 MS.gene86114:CDS 35.0%
! GCAAATGTTGGAATTTGCTT+GGG - chr6.3:8967036-8967055 MS.gene86114:intron 35.0%
!! AACCGAAAGTTTTTCAAACC+TGG + chr6.3:8966671-8966690 None:intergenic 35.0%
!! AGAGGTATCATACCATTCAA+AGG - chr6.3:8965495-8965514 MS.gene86114:CDS 35.0%
!! ATATGCACTTTGAGACTACA+AGG - chr6.3:8966438-8966457 MS.gene86114:intron 35.0%
!!! TGAGCCGGTTTTAAGATTTT+TGG - chr6.3:8965664-8965683 MS.gene86114:CDS 35.0%
AAACGCTTGCTCAAATCAAG+AGG - chr6.3:8965150-8965169 MS.gene86114:CDS 40.0%
ACACCCACCTAAAAACACTA+AGG - chr6.3:8965872-8965891 MS.gene86114:CDS 40.0%
ACACCCACCTAAAAACACTA+AGG + chr6.3:8965891-8965872 None:intergenic 40.0%
ACGAATGAAATTGCAGATCG+AGG - chr6.3:8967145-8967164 MS.gene86114:CDS 40.0%
AGGTTATGTGAAAGCCTCTA+AGG + chr6.3:8965107-8965126 None:intergenic 40.0%
CTACAAGGTCAAACTCTTAC+TGG - chr6.3:8966453-8966472 MS.gene86114:intron 40.0%
CTGTCAATACTTACTCTTGG+GGG + chr6.3:8966271-8966290 None:intergenic 40.0%
CTTGGACAAAGTGATTAAGG+AGG - chr6.3:8967510-8967529 MS.gene86114:CDS 40.0%
GAAACTAAGCAAGTAACTGG+TGG + chr6.3:8965354-8965373 None:intergenic 40.0%
GATTCTTGACTCATTGTGGA+TGG - chr6.3:8967224-8967243 MS.gene86114:CDS 40.0%
GCAAATTCCAACATTTGCTC+GGG + chr6.3:8967034-8967053 None:intergenic 40.0%
GCTGATCAATGAATTGATGG+TGG - chr6.3:8967396-8967415 MS.gene86114:CDS 40.0%
GGCCTAATGATCCACAAAAA+TGG + chr6.3:8967082-8967101 None:intergenic 40.0%
GTTGGCTGATCAGCAAAAAA+TGG + chr6.3:8967298-8967317 None:intergenic 40.0%
TATGGAATCATCACAGCATG+TGG + chr6.3:8965033-8965052 None:intergenic 40.0%
TGATACGAATGTGAAGAGAG+GGG - chr6.3:8967363-8967382 MS.gene86114:CDS 40.0%
TGCAATGGAGTTGAAGAAGA+AGG - chr6.3:8967447-8967466 MS.gene86114:CDS 40.0%
TGGTTCAACACTTTCTCTTG+TGG + chr6.3:8967190-8967209 None:intergenic 40.0%
TTCATGTATGAACAACCACC+TGG + chr6.3:8967490-8967509 None:intergenic 40.0%
! AAATCTTAAAACCGGCTCAG+TGG + chr6.3:8965663-8965682 None:intergenic 40.0%
! ATATGGCCTTGAACTGGATA+TGG + chr6.3:8965051-8965070 None:intergenic 40.0%
!! TCTTGATTGGCTTGAATCCA+AGG - chr6.3:8966958-8966977 MS.gene86114:intron 40.0%
!!! GCACCTTAGTGTTTTTAGGT+GGG - chr6.3:8966232-8966251 MS.gene86114:intron 40.0%
!!! GCACCTTAGTGTTTTTAGGT+GGG + chr6.3:8966251-8966232 None:intergenic 40.0%
!!! TGCACCTTAGTGTTTTTAGG+TGG - chr6.3:8966231-8966250 MS.gene86114:intron 40.0%
!!! TGCACCTTAGTGTTTTTAGG+TGG + chr6.3:8966250-8966231 None:intergenic 40.0%
AATGAAGGTAAAGGGCCGAT+AGG + chr6.3:8966866-8966885 None:intergenic 45.0%
ATCGAGGCCTAATAGCAAGT+TGG - chr6.3:8967161-8967180 MS.gene86114:CDS 45.0%
ATGAAGGTAAAGGGCCGATA+GGG + chr6.3:8966865-8966884 None:intergenic 45.0%
CTAACATCACCATCACCTAG+TGG + chr6.3:8965237-8965256 None:intergenic 45.0%
GACGTTGAGGCAAAATGCAA+TGG - chr6.3:8967432-8967451 MS.gene86114:CDS 45.0%
GAGAGAAAGGAAAGACGTTG+AGG - chr6.3:8967419-8967438 MS.gene86114:CDS 45.0%
GCAAAGCTTCTTCACCTTAG+AGG - chr6.3:8965090-8965109 MS.gene86114:CDS 45.0%
GTGCAAATTCTTCAGCAGCT+TGG + chr6.3:8965401-8965420 None:intergenic 45.0%
GTGTTGAACCACCCTTCAAT+CGG - chr6.3:8967199-8967218 MS.gene86114:CDS 45.0%
TATGACACCCGAGCAAATGT+TGG - chr6.3:8967024-8967043 MS.gene86114:intron 45.0%
TCCAGCGCATATGCTTTCAA+TGG + chr6.3:8967257-8967276 None:intergenic 45.0%
! ACCATTGAAAGCATATGCGC+TGG - chr6.3:8967253-8967272 MS.gene86114:CDS 45.0%
! CTAGTGGTGTTAGACCATCT+GGG + chr6.3:8965221-8965240 None:intergenic 45.0%
! GGATTGATATGGCCTTGAAC+TGG + chr6.3:8965057-8965076 None:intergenic 45.0%
! GTCAAACCGTCTAAGGCATT+CGG + chr6.3:8965177-8965196 None:intergenic 45.0%
! GTTGGAATTTGCTTGGGGTT+TGG - chr6.3:8967042-8967061 MS.gene86114:CDS 45.0%
! TCAAGAATCCGCCGATTGAA+GGG + chr6.3:8967213-8967232 None:intergenic 45.0%
!! AGCTTTGAAACCATCCCAGA+TGG - chr6.3:8965204-8965223 MS.gene86114:CDS 45.0%
!! GAATTGATGGTGGGAGAGAA+AGG - chr6.3:8967406-8967425 MS.gene86114:CDS 45.0%
!! GTGGACACCAACTTGCTATT+AGG + chr6.3:8967171-8967190 None:intergenic 45.0%
!! ATATATATATATAATATAGA+GGG + chr6.3:8965822-8965841 None:intergenic 5.0%
!! ATATATATATATATATATAG+GGG - chr6.3:8965838-8965857 MS.gene86114:CDS 5.0%
!! TATATATATATATAATATAG+AGG + chr6.3:8965823-8965842 None:intergenic 5.0%
!!! CATTTTATTTTTTAAAATTT+AGG - chr6.3:8966358-8966377 MS.gene86114:intron 5.0%
!!! CTAAATTTTAAAAAATAAAA+TGG + chr6.3:8966360-8966379 None:intergenic 5.0%
!!! CTAATTAATTTTAAATAAAA+GGG - chr6.3:8965953-8965972 MS.gene86114:intron 5.0%
!!! TCTAATTAATTTTAAATAAA+AGG - chr6.3:8965952-8965971 MS.gene86114:intron 5.0%
AGAGGTCCGAATGCCTTAGA+CGG - chr6.3:8965168-8965187 MS.gene86114:CDS 50.0%
ATTAGGCCGGACCTTGTCAT+TGG - chr6.3:8967094-8967113 MS.gene86114:CDS 50.0%
CAAGAGAACACTAGACCAGG+TGG - chr6.3:8967472-8967491 MS.gene86114:CDS 50.0%
CCAGATGGTCTAACACCACT+AGG - chr6.3:8965219-8965238 MS.gene86114:CDS 50.0%
GAATGTGAAGAGAGGGGAGT+TGG - chr6.3:8967369-8967388 MS.gene86114:CDS 50.0%
GCAAGTAACTGGTGGGACAT+TGG + chr6.3:8965346-8965365 None:intergenic 50.0%
GCACAAGAGAACACTAGACC+AGG - chr6.3:8967469-8967488 MS.gene86114:CDS 50.0%
GGGCCGATAGGGTAAAAAGA+AGG + chr6.3:8966854-8966873 None:intergenic 50.0%
GGTCTAACACCACTAGGTGA+TGG - chr6.3:8965225-8965244 MS.gene86114:CDS 50.0%
TCACTGAGCCACCAATGACA+AGG + chr6.3:8967108-8967127 None:intergenic 50.0%
TTGAACCACCCTTCAATCGG+CGG - chr6.3:8967202-8967221 MS.gene86114:CDS 50.0%
! CCTAGTGGTGTTAGACCATC+TGG + chr6.3:8965222-8965241 None:intergenic 50.0%
! GGCGGATTCTTGACTCATTG+TGG - chr6.3:8967220-8967239 MS.gene86114:CDS 50.0%
! GTCAAGAATCCGCCGATTGA+AGG + chr6.3:8967214-8967233 None:intergenic 50.0%
! TGGTGTTAGACCATCTGGGA+TGG + chr6.3:8965217-8965236 None:intergenic 50.0%
! TTGGCTTGAATCCAAGGAGC+CGG - chr6.3:8966964-8966983 MS.gene86114:intron 50.0%
GAGCCACCAATGACAAGGTC+CGG + chr6.3:8967103-8967122 None:intergenic 55.0%
TGGCTTGAATCCAAGGAGCC+GGG - chr6.3:8966965-8966984 MS.gene86114:intron 55.0%
! AGAATCCGCCGATTGAAGGG+TGG + chr6.3:8967210-8967229 None:intergenic 55.0%
!! CTGGAGTGCCGATGTTGTGT+TGG - chr6.3:8967272-8967291 MS.gene86114:CDS 55.0%
AACAACGGATCCCGGCTCCT+TGG + chr6.3:8966978-8966997 None:intergenic 60.0%
AGGCCGGACCTTGTCATTGG+TGG - chr6.3:8967097-8967116 MS.gene86114:CDS 60.0%


Chromosome Type Strat End Strand Name
chr6.3 gene 8965006 8967552 8965006 ID=MS.gene86114
chr6.3 mRNA 8965006 8967552 8965006 ID=MS.gene86114.t1;Parent=MS.gene86114
chr6.3 exon 8967042 8967552 8967042 ID=MS.gene86114.t1.exon1;Parent=MS.gene86114.t1
chr6.3 CDS 8967042 8967552 8967042 ID=cds.MS.gene86114.t1;Parent=MS.gene86114.t1
chr6.3 exon 8965006 8965940 8965006 ID=MS.gene86114.t1.exon2;Parent=MS.gene86114.t1
chr6.3 CDS 8965006 8965940 8965006 ID=cds.MS.gene86114.t1;Parent=MS.gene86114.t1
Gene Sequence

>MS.gene86114

ATGGGAAACTTTGCAAACAGAAAACCACATGCTGTGATGATTCCATATCCAGTTCAAGGCCATATCAATCCATTATTCAAACTAGCAAAGCTTCTTCACCTTAGAGGCTTTCACATAACCTTTGTTAACACTGAATACAATCACAAACGCTTGCTCAAATCAAGAGGTCCGAATGCCTTAGACGGTTTGACTGATTTTAGCTTTGAAACCATCCCAGATGGTCTAACACCACTAGGTGATGGTGATGTTAGTCAAGATGTACCAACTCTTTGTAAATCAGTAAGAAAGAATTTCCTTAAACCCTATTGTGAACTTATTACTAGGCTTAATCACTCTGCCAATGTCCCACCAGTTACTTGCTTAGTTTCTGATTGTTGTATGAGCTTTACTATCCAAGCTGCTGAAGAATTTGCACTCCCAAATGTTCTCTATTTTTCATCTAGTGCATGTTCTTTATTGAATGTGATGTACTTTCGATCTTTTGTAGAAAGAGGTATCATACCATTCAAAGGTACTAAGTTTACTCTCTCTCTCACACACACACATACACATACACATACATATACATAAACATATACACATACACATACAGATACATATACATATATATATATATATATATATATATATATATATATATATATATATATATATCCACTGAGCCGGTTTTAAGATTTTTGGTGTCCTGGATGAAACAATAAAATTGTGCCCTTTTAATATTATAATATTTTTCTTCTTGTATTTGTTTTAAAAGATTCATTTATTTTCAAAGTTTTCTAAAAATTTATTTTCAATATAATTAATCAAACAGAACCCTCTATATTATATATATATATATATATATATATATAGGGGGCTGCTAACTTACACCCACCTAAAAACACTAAGGTGCAAGTTAGCAAGCTGCACCCACTTATAATTTACTAAAACACCCTTTTGTTTATATTCTAATTAATTTTAAATAAAAGGGCAATTTTGTAACTAACTTAAGAAAGATTCTTAAAAAAAGAAACAAAAAAGAGAATGACATGTTTAAGGTACAAAACATGTAATAAAGACAAACTTTTAAGGAAACAATATTTGGAATGATGAAAGTGGGTGTAAATTAGTGAAAGTTGCTAACTTGCACCTTAATAATACTTATAAAAATGAGTGTAAATAATCAAGTGGGTGTAGGTTGCTAACTTGCACCTTAATAATTTTAGGTGGGTGTAGCTTGCTAACTTGCACCTTAGTGTTTTTAGGTGGGTGTAAGTTAGCAGCCCCCAAGAGTAAGTATTGACAGTTGTTTCCGAAAGTATGTGTGTAAAAATCAACTTACTCCAAGAGTAAGTATTGACATATTGCTATTCCATTTTATTTTTTAAAATTTAGGAAGGGGAAAATTATTACTAATCATAATTTTACAATTGTTTCCGAAAGTATTTCAACTATATGCACTTTGAGACTACAAGGTCAAACTCTTACTGGAGTTTATAACTCATAGAGTAGTTAACACAATTAATAACAATTCAACCGTCAAATTAAAAACTTTCATTGAATGTGTAACACCTTATATATGTGTGTGTATGAACCTTCAAGCAATTAACTTTCGTTCTTATGATATGCGCAGATGAGAGTTATCTTACAAATGGATGTTTGGAAACAAAAGTAGATTGGATTCCAGGTTTGAAAAACTTTCGGTTGAAAGACATTGTTGACTTTATCAGGACAACAAATCCAAATGATATTATGTTGAATTTCTTTATTGAAATTGCAGATAGAGTTAATAGTGACTCTACTATTCTTTTGAATACTTTCAATGAACTTGAGAGTGATGTAATAAATGCTCTCTCCTCTATAATTCCTTCTTTTTACCCTATCGGCCCTTTACCTTCATTATTAAACCAAAATCCACAAATTCATCAATTGGACTCTTTAGATTCCAACCTTTGGAAAGAAGATACTGAGTGTCTTGATTGGCTTGAATCCAAGGAGCCGGGATCCGTTGTTTATGTTAATTTCGGCAGCATTACAGTTATGACACCCGAGCAAATGTTGGAATTTGCTTGGGGTTTGGCCAATTGCAAGAAACCATTTTTGTGGATCATTAGGCCGGACCTTGTCATTGGTGGCTCAGTGATTTTGTCAACTGAGTTTACGAATGAAATTGCAGATCGAGGCCTAATAGCAAGTTGGTGTCCACAAGAGAAAGTGTTGAACCACCCTTCAATCGGCGGATTCTTGACTCATTGTGGATGGAATTCAACCATTGAAAGCATATGCGCTGGAGTGCCGATGTTGTGTTGGCCATTTTTTGCTGATCAGCCAACAGACTGTAGATTTATTTGTAATGAATGGGAGATTGGTATGGAAATTGATACGAATGTGAAGAGAGGGGAGTTGGCCAAGCTGATCAATGAATTGATGGTGGGAGAGAAAGGAAAGACGTTGAGGCAAAATGCAATGGAGTTGAAGAAGAAGGCACAAGAGAACACTAGACCAGGTGGTTGTTCATACATGAACTTGGACAAAGTGATTAAGGAGGTGTTGCTTAAACAAAATTAG

Protein sequence

>MS.gene86114.t1

MGNFANRKPHAVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPNALDGLTDFSFETIPDGLTPLGDGDVSQDVPTLCKSVRKNFLKPYCELITRLNHSANVPPVTCLVSDCCMSFTIQAAEEFALPNVLYFSSSACSLLNVMYFRSFVERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLNFFIEIADRVNSDSTILLNTFNELESDVINALSSIIPSFYPIGPLPSLLNQNPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSITVMTPEQMLEFAWGLANCKKPFLWIIRPDLVIGGSVILSTEFTNEIADRGLIASWCPQEKVLNHPSIGGFLTHCGWNSTIESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTNVKRGELAKLINELMVGEKGKTLRQNAMELKKKAQENTRPGGCSYMNLDKVIKEVLLKQN