Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009405.t1 | XP_003598165.1 | 87.6 | 482 | 13 | 1 | 1 | 435 | 1 | 482 | 1.50E-238 | 835.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009405.t1 | F8WKW1 | 52.5 | 476 | 173 | 5 | 8 | 433 | 9 | 481 | 6.3e-137 | 488.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009405.t1 | G7IVJ7 | 87.6 | 482 | 13 | 1 | 1 | 435 | 1 | 482 | 1.1e-238 | 835.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009405.t1 | MTR_3g008010 | 87.552 | 482 | 13 | 1 | 1 | 435 | 1 | 482 | 0.0 | 844 |
MS.gene009405.t1 | MTR_6g014290 | 78.838 | 482 | 55 | 1 | 1 | 435 | 1 | 482 | 0.0 | 771 |
MS.gene009405.t1 | MTR_6g014250 | 75.519 | 482 | 71 | 1 | 1 | 435 | 1 | 482 | 0.0 | 724 |
MS.gene009405.t1 | MTR_6g014220 | 72.083 | 480 | 87 | 1 | 1 | 433 | 1 | 480 | 0.0 | 701 |
MS.gene009405.t1 | MTR_6g014170 | 70.747 | 482 | 78 | 2 | 1 | 435 | 1 | 466 | 0.0 | 671 |
MS.gene009405.t1 | MTR_6g014040 | 64.609 | 486 | 120 | 4 | 1 | 435 | 1 | 485 | 0.0 | 631 |
MS.gene009405.t1 | MTR_6g013440 | 65.361 | 485 | 116 | 4 | 1 | 434 | 1 | 484 | 0.0 | 629 |
MS.gene009405.t1 | MTR_6g014020 | 64.124 | 485 | 123 | 3 | 1 | 435 | 1 | 484 | 0.0 | 628 |
MS.gene009405.t1 | MTR_6g014186 | 68.326 | 442 | 127 | 3 | 4 | 433 | 1 | 441 | 0.0 | 625 |
MS.gene009405.t1 | MTR_6g014310 | 66.186 | 485 | 112 | 4 | 1 | 434 | 1 | 484 | 0.0 | 614 |
MS.gene009405.t1 | MTR_6g014050 | 66.667 | 486 | 110 | 4 | 1 | 435 | 1 | 485 | 0.0 | 608 |
MS.gene009405.t1 | MTR_6g014270 | 63.017 | 484 | 126 | 4 | 4 | 435 | 1 | 483 | 0.0 | 605 |
MS.gene009405.t1 | MTR_6g014200 | 64.167 | 480 | 121 | 3 | 4 | 433 | 1 | 479 | 0.0 | 595 |
MS.gene009405.t1 | MTR_8g059425 | 63.299 | 485 | 125 | 5 | 1 | 435 | 1 | 482 | 0.0 | 595 |
MS.gene009405.t1 | MTR_0288s0020 | 63.093 | 485 | 107 | 4 | 1 | 434 | 1 | 464 | 0.0 | 595 |
MS.gene009405.t1 | MTR_6g014150 | 63.278 | 482 | 126 | 3 | 4 | 435 | 1 | 481 | 0.0 | 591 |
MS.gene009405.t1 | MTR_6g013450 | 61.443 | 485 | 135 | 4 | 1 | 434 | 1 | 484 | 0.0 | 590 |
MS.gene009405.t1 | MTR_6g014300 | 61.523 | 486 | 118 | 5 | 1 | 434 | 1 | 469 | 0.0 | 585 |
MS.gene009405.t1 | MTR_6g011340 | 62.810 | 484 | 129 | 3 | 1 | 434 | 1 | 483 | 0.0 | 581 |
MS.gene009405.t1 | MTR_6g014187 | 61.443 | 485 | 136 | 3 | 1 | 435 | 1 | 484 | 0.0 | 580 |
MS.gene009405.t1 | MTR_6g013960 | 60.206 | 485 | 142 | 3 | 1 | 435 | 1 | 484 | 0.0 | 577 |
MS.gene009405.t1 | MTR_6g013900 | 60.000 | 485 | 142 | 4 | 1 | 435 | 1 | 483 | 0.0 | 550 |
MS.gene009405.t1 | MTR_6g013920 | 59.711 | 484 | 143 | 4 | 1 | 434 | 1 | 482 | 0.0 | 545 |
MS.gene009405.t1 | MTR_5g058320 | 58.921 | 482 | 136 | 5 | 1 | 434 | 1 | 468 | 0.0 | 545 |
MS.gene009405.t1 | MTR_7g011470 | 59.917 | 484 | 129 | 4 | 1 | 434 | 1 | 469 | 0.0 | 535 |
MS.gene009405.t1 | MTR_6g013990 | 60.041 | 483 | 140 | 4 | 1 | 433 | 1 | 480 | 0.0 | 534 |
MS.gene009405.t1 | MTR_6g014240 | 58.038 | 479 | 126 | 4 | 4 | 435 | 1 | 451 | 0.0 | 529 |
MS.gene009405.t1 | MTR_7g011470 | 59.298 | 484 | 128 | 4 | 1 | 434 | 1 | 465 | 0.0 | 528 |
MS.gene009405.t1 | MTR_6g013680 | 67.358 | 386 | 111 | 5 | 55 | 434 | 2 | 378 | 0.0 | 517 |
MS.gene009405.t1 | MTR_5g464810 | 51.163 | 473 | 178 | 6 | 10 | 433 | 12 | 480 | 5.13e-166 | 476 |
MS.gene009405.t1 | MTR_5g064240 | 51.163 | 473 | 178 | 6 | 10 | 433 | 12 | 480 | 5.13e-166 | 476 |
MS.gene009405.t1 | MTR_5g464760 | 50.210 | 476 | 182 | 7 | 8 | 432 | 10 | 481 | 1.53e-161 | 464 |
MS.gene009405.t1 | MTR_0036s0220 | 48.033 | 483 | 196 | 7 | 1 | 432 | 1 | 479 | 6.32e-159 | 457 |
MS.gene009405.t1 | MTR_2g008210 | 48.632 | 475 | 189 | 5 | 8 | 432 | 9 | 478 | 1.51e-158 | 456 |
MS.gene009405.t1 | MTR_8g007585 | 55.835 | 437 | 150 | 8 | 1 | 435 | 1 | 396 | 1.36e-151 | 436 |
MS.gene009405.t1 | MTR_0199s0010 | 75.357 | 280 | 63 | 2 | 1 | 275 | 1 | 279 | 3.69e-151 | 430 |
MS.gene009405.t1 | MTR_3g479490 | 43.789 | 475 | 216 | 4 | 6 | 431 | 2 | 474 | 4.77e-143 | 417 |
MS.gene009405.t1 | MTR_8g043470 | 51.179 | 424 | 110 | 3 | 59 | 435 | 9 | 382 | 7.90e-139 | 403 |
MS.gene009405.t1 | MTR_3g079480 | 43.552 | 473 | 216 | 4 | 8 | 431 | 19 | 489 | 1.03e-138 | 406 |
MS.gene009405.t1 | MTR_3g479520 | 42.495 | 473 | 221 | 4 | 8 | 431 | 13 | 483 | 3.41e-136 | 400 |
MS.gene009405.t1 | MTR_6g013435 | 64.856 | 313 | 101 | 5 | 128 | 434 | 1 | 310 | 2.02e-135 | 391 |
MS.gene009405.t1 | MTR_4g094220 | 43.038 | 474 | 215 | 5 | 7 | 427 | 4 | 475 | 6.57e-134 | 394 |
MS.gene009405.t1 | MTR_6g014160 | 50.790 | 443 | 164 | 9 | 1 | 435 | 1 | 397 | 4.31e-129 | 379 |
MS.gene009405.t1 | MTR_3g479470 | 42.283 | 473 | 223 | 3 | 6 | 430 | 9 | 479 | 6.00e-126 | 374 |
MS.gene009405.t1 | MTR_0477s0010 | 53.803 | 355 | 81 | 3 | 128 | 434 | 1 | 320 | 1.95e-119 | 351 |
MS.gene009405.t1 | MTR_6g014190 | 57.877 | 292 | 75 | 2 | 191 | 435 | 1 | 291 | 2.77e-114 | 337 |
MS.gene009405.t1 | MTR_6g014195 | 68.718 | 195 | 58 | 1 | 1 | 192 | 1 | 195 | 8.20e-94 | 281 |
MS.gene009405.t1 | MTR_6g013890 | 56.432 | 241 | 72 | 6 | 170 | 397 | 21 | 241 | 2.68e-84 | 259 |
MS.gene009405.t1 | MTR_6g014185 | 42.263 | 433 | 94 | 11 | 47 | 431 | 21 | 345 | 2.83e-83 | 260 |
MS.gene009405.t1 | MTR_3g479610 | 41.801 | 311 | 132 | 3 | 170 | 431 | 3 | 313 | 1.26e-77 | 244 |
MS.gene009405.t1 | MTR_0891s0010 | 37.931 | 290 | 131 | 3 | 191 | 431 | 1 | 290 | 2.02e-64 | 209 |
MS.gene009405.t1 | MTR_0475s0020 | 74.242 | 132 | 30 | 2 | 1 | 128 | 1 | 132 | 4.47e-61 | 197 |
MS.gene009405.t1 | MTR_3g069710 | 29.536 | 474 | 245 | 14 | 12 | 431 | 14 | 452 | 6.27e-54 | 186 |
MS.gene009405.t1 | MTR_3g479620 | 48.795 | 166 | 83 | 1 | 6 | 171 | 2 | 165 | 3.19e-53 | 176 |
MS.gene009405.t1 | MTR_5g066390 | 56.790 | 162 | 23 | 1 | 321 | 435 | 58 | 219 | 1.75e-50 | 170 |
MS.gene009405.t1 | MTR_3g069690 | 27.966 | 472 | 257 | 13 | 12 | 431 | 10 | 450 | 5.34e-49 | 173 |
MS.gene009405.t1 | MTR_5g031860 | 28.151 | 476 | 271 | 13 | 9 | 430 | 11 | 469 | 5.25e-48 | 171 |
MS.gene009405.t1 | MTR_5g031830 | 27.197 | 478 | 278 | 12 | 7 | 430 | 9 | 470 | 3.42e-46 | 166 |
MS.gene009405.t1 | MTR_5g031840 | 26.105 | 475 | 281 | 12 | 9 | 430 | 4 | 461 | 2.36e-45 | 164 |
MS.gene009405.t1 | MTR_4g064987 | 27.564 | 468 | 248 | 13 | 12 | 422 | 10 | 443 | 1.91e-43 | 158 |
MS.gene009405.t1 | MTR_1g107380 | 24.845 | 483 | 282 | 12 | 10 | 432 | 13 | 474 | 1.44e-42 | 156 |
MS.gene009405.t1 | MTR_4g064987 | 27.331 | 472 | 238 | 14 | 12 | 422 | 10 | 437 | 4.08e-40 | 149 |
MS.gene009405.t1 | MTR_6g038240 | 24.580 | 476 | 288 | 13 | 6 | 434 | 7 | 458 | 5.56e-40 | 149 |
MS.gene009405.t1 | MTR_7g013240 | 25.316 | 474 | 257 | 13 | 9 | 427 | 5 | 436 | 1.10e-39 | 148 |
MS.gene009405.t1 | MTR_7g013260 | 26.891 | 476 | 248 | 14 | 9 | 427 | 5 | 437 | 1.35e-39 | 147 |
MS.gene009405.t1 | MTR_5g035580 | 26.250 | 480 | 258 | 13 | 6 | 427 | 9 | 450 | 1.80e-39 | 147 |
MS.gene009405.t1 | MTR_6g038230 | 26.186 | 485 | 255 | 16 | 6 | 427 | 7 | 451 | 1.07e-38 | 145 |
MS.gene009405.t1 | MTR_1g107350 | 25.051 | 491 | 268 | 16 | 10 | 430 | 8 | 468 | 1.57e-38 | 145 |
MS.gene009405.t1 | MTR_7g080935 | 25.800 | 469 | 261 | 14 | 8 | 422 | 9 | 444 | 1.98e-38 | 145 |
MS.gene009405.t1 | MTR_7g013200 | 27.195 | 467 | 258 | 14 | 9 | 427 | 4 | 436 | 1.36e-36 | 139 |
MS.gene009405.t1 | MTR_7g080940 | 25.745 | 470 | 260 | 17 | 8 | 422 | 9 | 444 | 2.12e-36 | 139 |
MS.gene009405.t1 | MTR_3g049970 | 23.554 | 484 | 284 | 11 | 10 | 430 | 9 | 469 | 8.45e-36 | 138 |
MS.gene009405.t1 | MTR_6g038300 | 24.788 | 472 | 283 | 13 | 9 | 432 | 10 | 457 | 1.17e-35 | 137 |
MS.gene009405.t1 | MTR_5g035560 | 25.207 | 484 | 266 | 14 | 6 | 431 | 7 | 452 | 2.67e-35 | 137 |
MS.gene009405.t1 | MTR_4g095008 | 24.435 | 487 | 285 | 14 | 7 | 435 | 8 | 469 | 2.75e-35 | 137 |
MS.gene009405.t1 | MTR_7g013220 | 26.115 | 471 | 261 | 14 | 9 | 423 | 4 | 443 | 3.16e-35 | 135 |
MS.gene009405.t1 | MTR_8g064870 | 25.506 | 494 | 260 | 17 | 12 | 430 | 13 | 473 | 3.24e-35 | 136 |
MS.gene009405.t1 | MTR_8g088560 | 25.263 | 475 | 274 | 16 | 10 | 430 | 10 | 457 | 8.07e-35 | 135 |
MS.gene009405.t1 | MTR_7g013180 | 25.261 | 479 | 264 | 15 | 9 | 429 | 4 | 446 | 9.66e-35 | 134 |
MS.gene009405.t1 | MTR_1g032490 | 24.224 | 483 | 282 | 11 | 10 | 430 | 10 | 470 | 1.25e-34 | 134 |
MS.gene009405.t1 | MTR_7g080950 | 24.160 | 476 | 270 | 15 | 8 | 427 | 4 | 444 | 1.34e-34 | 134 |
MS.gene009405.t1 | MTR_2086s0010 | 39.535 | 172 | 56 | 2 | 308 | 431 | 1 | 172 | 6.42e-34 | 125 |
MS.gene009405.t1 | MTR_1996s0010 | 39.535 | 172 | 56 | 2 | 308 | 431 | 1 | 172 | 6.42e-34 | 125 |
MS.gene009405.t1 | MTR_1g107315 | 25.714 | 490 | 282 | 13 | 1 | 430 | 1 | 468 | 1.17e-33 | 132 |
MS.gene009405.t1 | MTR_6g038200 | 25.103 | 486 | 259 | 17 | 6 | 427 | 7 | 451 | 1.44e-33 | 131 |
MS.gene009405.t1 | MTR_5g072860 | 25.949 | 474 | 274 | 17 | 10 | 431 | 18 | 466 | 1.62e-32 | 128 |
MS.gene009405.t1 | MTR_6g038220 | 24.116 | 481 | 269 | 16 | 6 | 427 | 7 | 450 | 1.88e-32 | 128 |
MS.gene009405.t1 | MTR_4g094920 | 24.341 | 493 | 284 | 16 | 5 | 435 | 19 | 484 | 5.13e-32 | 127 |
MS.gene009405.t1 | MTR_5g075440 | 24.274 | 482 | 270 | 18 | 10 | 431 | 10 | 456 | 1.10e-31 | 126 |
MS.gene009405.t1 | MTR_8g083290 | 25.403 | 496 | 264 | 19 | 9 | 431 | 2 | 464 | 1.40e-30 | 123 |
MS.gene009405.t1 | MTR_1g107365 | 24.843 | 479 | 281 | 15 | 5 | 430 | 39 | 491 | 2.21e-30 | 123 |
MS.gene009405.t1 | MTR_1g107285 | 23.944 | 497 | 257 | 17 | 12 | 430 | 10 | 463 | 4.17e-30 | 122 |
MS.gene009405.t1 | MTR_7g070610 | 23.800 | 500 | 276 | 14 | 10 | 430 | 13 | 486 | 3.33e-29 | 119 |
MS.gene009405.t1 | MTR_3g084520 | 25.100 | 498 | 265 | 19 | 10 | 430 | 6 | 472 | 5.61e-29 | 119 |
MS.gene009405.t1 | MTR_5g072810 | 23.673 | 490 | 267 | 17 | 5 | 430 | 7 | 453 | 3.64e-28 | 116 |
MS.gene009405.t1 | MTR_8g064880 | 26.039 | 361 | 232 | 11 | 12 | 358 | 11 | 350 | 4.08e-28 | 116 |
MS.gene009405.t1 | MTR_1g107375 | 22.851 | 477 | 281 | 13 | 10 | 430 | 8 | 453 | 5.52e-28 | 115 |
MS.gene009405.t1 | MTR_3g031450 | 25.678 | 479 | 265 | 16 | 5 | 431 | 13 | 452 | 5.86e-28 | 115 |
MS.gene009405.t1 | MTR_1g107360 | 24.236 | 491 | 260 | 16 | 12 | 430 | 11 | 461 | 6.03e-28 | 115 |
MS.gene009405.t1 | MTR_7g071040 | 25.245 | 511 | 265 | 15 | 5 | 430 | 12 | 490 | 1.08e-27 | 115 |
MS.gene009405.t1 | MTR_3g084540 | 24.000 | 500 | 269 | 17 | 10 | 430 | 6 | 473 | 1.09e-27 | 115 |
MS.gene009405.t1 | MTR_3g084530 | 23.647 | 499 | 271 | 16 | 10 | 430 | 6 | 472 | 2.92e-27 | 114 |
MS.gene009405.t1 | MTR_7g070910 | 24.303 | 502 | 281 | 15 | 5 | 430 | 6 | 484 | 3.55e-27 | 114 |
MS.gene009405.t1 | MTR_5g072830 | 23.431 | 478 | 270 | 14 | 10 | 430 | 10 | 448 | 1.13e-26 | 112 |
MS.gene009405.t1 | MTR_3g031400 | 24.738 | 477 | 266 | 18 | 7 | 431 | 15 | 450 | 1.27e-26 | 112 |
MS.gene009405.t1 | MTR_7g055710 | 23.611 | 504 | 269 | 14 | 10 | 429 | 11 | 482 | 1.88e-26 | 111 |
MS.gene009405.t1 | MTR_5g072840 | 24.051 | 474 | 274 | 15 | 10 | 431 | 10 | 449 | 2.34e-26 | 110 |
MS.gene009405.t1 | MTR_7g070860 | 24.536 | 485 | 273 | 18 | 10 | 430 | 7 | 462 | 3.76e-26 | 110 |
MS.gene009405.t1 | MTR_4g485630 | 23.139 | 497 | 282 | 13 | 6 | 430 | 5 | 473 | 4.68e-26 | 110 |
MS.gene009405.t1 | MTR_7g070800 | 22.938 | 497 | 280 | 15 | 10 | 430 | 6 | 475 | 5.84e-26 | 110 |
MS.gene009405.t1 | MTR_5g098960 | 26.300 | 327 | 215 | 9 | 8 | 332 | 5 | 307 | 8.99e-26 | 109 |
MS.gene009405.t1 | MTR_5g072820 | 24.524 | 473 | 271 | 18 | 10 | 430 | 10 | 448 | 3.01e-25 | 107 |
MS.gene009405.t1 | MTR_8g027870 | 24.551 | 501 | 256 | 18 | 9 | 433 | 17 | 471 | 7.81e-25 | 106 |
MS.gene009405.t1 | MTR_8g083280 | 24.689 | 482 | 273 | 16 | 12 | 431 | 9 | 462 | 1.44e-24 | 105 |
MS.gene009405.t1 | MTR_4g008630 | 23.517 | 489 | 262 | 17 | 12 | 430 | 16 | 462 | 5.23e-24 | 104 |
MS.gene009405.t1 | MTR_7g080900 | 25.070 | 359 | 225 | 12 | 10 | 360 | 12 | 334 | 8.97e-24 | 103 |
MS.gene009405.t1 | MTR_7g070930 | 27.066 | 351 | 203 | 10 | 5 | 334 | 9 | 327 | 1.18e-23 | 103 |
MS.gene009405.t1 | MTR_5g016480 | 27.394 | 376 | 227 | 17 | 11 | 369 | 9 | 355 | 2.29e-23 | 102 |
MS.gene009405.t1 | MTR_4g108250 | 22.397 | 509 | 285 | 15 | 5 | 430 | 6 | 487 | 4.72e-23 | 101 |
MS.gene009405.t1 | MTR_8g009073 | 23.400 | 500 | 265 | 15 | 10 | 433 | 6 | 463 | 5.00e-23 | 101 |
MS.gene009405.t1 | MTR_6g014000 | 63.014 | 73 | 27 | 0 | 359 | 431 | 84 | 156 | 6.33e-23 | 101 |
MS.gene009405.t1 | MTR_7g070660 | 25.146 | 342 | 201 | 9 | 10 | 332 | 11 | 316 | 2.29e-22 | 99.8 |
MS.gene009405.t1 | MTR_7g070780 | 23.340 | 497 | 281 | 17 | 10 | 430 | 11 | 483 | 3.28e-22 | 99.4 |
MS.gene009405.t1 | MTR_8g066610 | 23.625 | 491 | 283 | 18 | 10 | 430 | 9 | 477 | 3.56e-22 | 99.0 |
MS.gene009405.t1 | MTR_8g008970 | 22.200 | 500 | 271 | 15 | 10 | 433 | 6 | 463 | 8.58e-22 | 98.6 |
MS.gene009405.t1 | MTR_8g027885 | 23.742 | 497 | 265 | 16 | 9 | 433 | 17 | 471 | 1.20e-21 | 97.4 |
MS.gene009405.t1 | MTR_6g033725 | 22.746 | 488 | 268 | 15 | 12 | 426 | 6 | 457 | 1.41e-21 | 97.1 |
MS.gene009405.t1 | MTR_0078s0200 | 25.602 | 332 | 206 | 8 | 10 | 332 | 6 | 305 | 1.87e-21 | 94.7 |
MS.gene009405.t1 | MTR_7g070740 | 24.706 | 340 | 220 | 10 | 5 | 332 | 6 | 321 | 2.13e-21 | 96.7 |
MS.gene009405.t1 | MTR_0184s0030 | 25.602 | 332 | 206 | 8 | 10 | 332 | 6 | 305 | 2.57e-21 | 96.3 |
MS.gene009405.t1 | MTR_6g033625 | 23.518 | 506 | 261 | 15 | 12 | 435 | 6 | 467 | 5.44e-21 | 95.5 |
MS.gene009405.t1 | MTR_6g033615 | 23.431 | 478 | 270 | 14 | 12 | 428 | 6 | 448 | 1.93e-20 | 93.6 |
MS.gene009405.t1 | MTR_1g107325 | 22.791 | 430 | 238 | 14 | 10 | 430 | 8 | 352 | 2.65e-20 | 92.4 |
MS.gene009405.t1 | MTR_7g070810 | 22.800 | 500 | 268 | 20 | 13 | 430 | 12 | 475 | 3.19e-20 | 93.2 |
MS.gene009405.t1 | MTR_8g006710 | 23.494 | 498 | 252 | 20 | 6 | 419 | 2 | 454 | 4.21e-20 | 92.8 |
MS.gene009405.t1 | MTR_7g046490 | 24.722 | 360 | 180 | 11 | 135 | 427 | 125 | 460 | 5.45e-20 | 92.4 |
MS.gene009405.t1 | MTR_6g042310 | 27.762 | 353 | 219 | 14 | 10 | 357 | 18 | 339 | 5.63e-20 | 92.4 |
MS.gene009405.t1 | MTR_8g465670 | 27.729 | 339 | 182 | 12 | 12 | 332 | 9 | 302 | 5.77e-20 | 92.4 |
MS.gene009405.t1 | MTR_7g070940 | 23.828 | 512 | 259 | 19 | 6 | 430 | 5 | 472 | 7.63e-20 | 92.0 |
MS.gene009405.t1 | MTR_7g117405 | 27.586 | 348 | 196 | 14 | 6 | 332 | 8 | 320 | 8.14e-20 | 92.0 |
MS.gene009405.t1 | MTR_5g045960 | 24.798 | 371 | 237 | 13 | 4 | 357 | 3 | 348 | 9.43e-20 | 91.7 |
MS.gene009405.t1 | MTR_5g087620 | 25.496 | 353 | 222 | 17 | 1 | 333 | 1 | 332 | 1.04e-19 | 91.7 |
MS.gene009405.t1 | MTR_7g102450 | 25.833 | 360 | 221 | 11 | 9 | 357 | 10 | 334 | 2.12e-19 | 90.5 |
MS.gene009405.t1 | MTR_7g102490 | 23.587 | 513 | 275 | 17 | 8 | 433 | 7 | 489 | 3.13e-19 | 90.1 |
MS.gene009405.t1 | MTR_6g013970 | 56.098 | 82 | 27 | 3 | 127 | 203 | 38 | 115 | 3.19e-19 | 86.3 |
MS.gene009405.t1 | MTR_5g045970 | 26.400 | 375 | 213 | 16 | 10 | 357 | 16 | 354 | 3.69e-19 | 90.1 |
MS.gene009405.t1 | MTR_4g024020 | 27.034 | 381 | 211 | 16 | 8 | 357 | 7 | 351 | 4.82e-19 | 89.7 |
MS.gene009405.t1 | MTR_8g006730 | 26.801 | 347 | 190 | 14 | 6 | 332 | 2 | 304 | 2.48e-18 | 87.4 |
MS.gene009405.t1 | MTR_8g009063 | 23.615 | 343 | 211 | 12 | 3 | 332 | 6 | 310 | 6.54e-18 | 86.3 |
MS.gene009405.t1 | MTR_8g006260 | 24.425 | 348 | 201 | 14 | 7 | 333 | 3 | 309 | 8.24e-18 | 85.9 |
MS.gene009405.t1 | MTR_1g019510 | 26.934 | 349 | 204 | 12 | 10 | 346 | 6 | 315 | 8.75e-18 | 85.9 |
MS.gene009405.t1 | MTR_8g009067 | 20.850 | 494 | 277 | 14 | 10 | 427 | 6 | 461 | 8.77e-18 | 85.9 |
MS.gene009405.t1 | MTR_6g033675 | 21.932 | 497 | 264 | 16 | 12 | 426 | 6 | 460 | 9.16e-18 | 85.9 |
MS.gene009405.t1 | MTR_6g033660 | 23.204 | 362 | 201 | 11 | 122 | 426 | 118 | 459 | 1.29e-17 | 85.1 |
MS.gene009405.t1 | MTR_5g090620 | 23.822 | 382 | 237 | 13 | 8 | 373 | 3 | 346 | 1.63e-17 | 85.1 |
MS.gene009405.t1 | MTR_8g009050 | 28.440 | 218 | 131 | 7 | 118 | 332 | 108 | 303 | 1.96e-17 | 84.7 |
MS.gene009405.t1 | MTR_5g067170 | 25.538 | 325 | 207 | 10 | 13 | 330 | 14 | 310 | 3.82e-17 | 84.0 |
MS.gene009405.t1 | MTR_7g117170 | 23.108 | 489 | 260 | 18 | 9 | 419 | 14 | 464 | 3.88e-17 | 84.0 |
MS.gene009405.t1 | MTR_0009s0240 | 25.344 | 363 | 232 | 14 | 5 | 357 | 2 | 335 | 5.22e-17 | 83.2 |
MS.gene009405.t1 | MTR_8g006220 | 27.596 | 337 | 183 | 13 | 13 | 332 | 9 | 301 | 5.95e-17 | 83.2 |
MS.gene009405.t1 | MTR_2g034990 | 24.138 | 493 | 274 | 19 | 13 | 430 | 14 | 481 | 9.24e-17 | 82.8 |
MS.gene009405.t1 | MTR_4g117950 | 23.374 | 492 | 265 | 18 | 13 | 430 | 9 | 462 | 9.74e-17 | 82.4 |
MS.gene009405.t1 | MTR_6g023665 | 25.904 | 332 | 198 | 12 | 12 | 332 | 15 | 309 | 1.08e-16 | 82.4 |
MS.gene009405.t1 | MTR_8g007565 | 25.269 | 372 | 243 | 15 | 10 | 373 | 7 | 351 | 1.17e-16 | 82.4 |
MS.gene009405.t1 | MTR_4g031800 | 24.233 | 326 | 214 | 9 | 13 | 332 | 12 | 310 | 1.93e-16 | 81.6 |
MS.gene009405.t1 | MTR_5g016660 | 22.485 | 507 | 284 | 20 | 6 | 430 | 4 | 483 | 1.95e-16 | 81.6 |
MS.gene009405.t1 | MTR_5g040030 | 21.600 | 500 | 283 | 14 | 12 | 430 | 16 | 487 | 2.57e-16 | 81.3 |
MS.gene009405.t1 | MTR_4g485620 | 21.830 | 481 | 273 | 16 | 24 | 430 | 3 | 454 | 3.04e-16 | 80.9 |
MS.gene009405.t1 | MTR_0184s0040 | 24.852 | 338 | 200 | 10 | 10 | 332 | 21 | 319 | 3.49e-16 | 80.9 |
MS.gene009405.t1 | MTR_0078s0190 | 24.852 | 338 | 200 | 10 | 10 | 332 | 21 | 319 | 3.49e-16 | 80.9 |
MS.gene009405.t1 | MTR_5g090630 | 26.385 | 379 | 221 | 15 | 8 | 373 | 3 | 336 | 3.65e-16 | 80.9 |
MS.gene009405.t1 | MTR_7g070870 | 24.713 | 348 | 198 | 14 | 7 | 332 | 13 | 318 | 3.73e-16 | 80.9 |
MS.gene009405.t1 | MTR_4g117960 | 25.982 | 331 | 198 | 15 | 13 | 330 | 14 | 310 | 4.71e-16 | 80.5 |
MS.gene009405.t1 | MTR_8g012745 | 27.203 | 261 | 149 | 7 | 78 | 332 | 81 | 306 | 4.74e-16 | 80.5 |
MS.gene009405.t1 | MTR_7g067330 | 23.297 | 455 | 239 | 16 | 8 | 407 | 7 | 406 | 4.78e-16 | 80.1 |
MS.gene009405.t1 | MTR_8g077590 | 29.075 | 227 | 128 | 7 | 113 | 332 | 106 | 306 | 5.98e-16 | 80.1 |
MS.gene009405.t1 | MTR_8g009073 | 24.438 | 356 | 177 | 10 | 144 | 433 | 5 | 334 | 6.99e-16 | 79.0 |
MS.gene009405.t1 | MTR_8g009067 | 22.284 | 359 | 191 | 9 | 135 | 427 | 7 | 343 | 8.33e-16 | 79.0 |
MS.gene009405.t1 | MTR_8g074550 | 25.073 | 343 | 200 | 15 | 8 | 332 | 5 | 308 | 8.73e-16 | 79.7 |
MS.gene009405.t1 | MTR_8g007650 | 25.000 | 372 | 244 | 15 | 10 | 373 | 7 | 351 | 9.52e-16 | 79.3 |
MS.gene009405.t1 | MTR_5g090670 | 25.469 | 373 | 237 | 14 | 8 | 370 | 3 | 344 | 9.65e-16 | 79.3 |
MS.gene009405.t1 | MTR_6g005600 | 26.393 | 341 | 198 | 14 | 7 | 333 | 3 | 304 | 1.55e-15 | 79.0 |
MS.gene009405.t1 | MTR_0536s0020 | 25.538 | 325 | 201 | 8 | 13 | 331 | 21 | 310 | 1.57e-15 | 79.0 |
MS.gene009405.t1 | MTR_5g066410 | 23.224 | 366 | 237 | 11 | 13 | 373 | 1 | 327 | 2.12e-15 | 78.2 |
MS.gene009405.t1 | MTR_6g488280 | 24.096 | 332 | 204 | 12 | 12 | 332 | 8 | 302 | 2.43e-15 | 78.2 |
MS.gene009405.t1 | MTR_0428s0010 | 24.096 | 332 | 204 | 12 | 12 | 332 | 8 | 302 | 2.43e-15 | 78.2 |
MS.gene009405.t1 | MTR_7g102520 | 26.377 | 345 | 201 | 15 | 10 | 332 | 12 | 325 | 2.50e-15 | 78.2 |
MS.gene009405.t1 | MTR_5g090660 | 25.439 | 342 | 199 | 15 | 8 | 332 | 3 | 305 | 4.27e-15 | 77.8 |
MS.gene009405.t1 | MTR_8g006230 | 28.571 | 217 | 129 | 6 | 119 | 332 | 52 | 245 | 6.18e-15 | 75.5 |
MS.gene009405.t1 | MTR_8g009055 | 24.850 | 334 | 204 | 12 | 10 | 332 | 6 | 303 | 6.53e-15 | 77.0 |
MS.gene009405.t1 | MTR_6g035265 | 26.380 | 326 | 196 | 14 | 13 | 330 | 14 | 303 | 8.36e-15 | 76.6 |
MS.gene009405.t1 | MTR_2g035020 | 25.982 | 331 | 200 | 14 | 13 | 330 | 14 | 312 | 9.88e-15 | 76.3 |
MS.gene009405.t1 | MTR_7g047030 | 23.077 | 338 | 206 | 10 | 10 | 332 | 6 | 304 | 1.24e-14 | 75.9 |
MS.gene009405.t1 | MTR_7g047270 | 23.077 | 338 | 206 | 10 | 10 | 332 | 6 | 304 | 1.24e-14 | 75.9 |
MS.gene009405.t1 | MTR_5g004940 | 26.754 | 228 | 128 | 6 | 242 | 430 | 150 | 377 | 1.81e-14 | 75.1 |
MS.gene009405.t1 | MTR_5g004940 | 29.032 | 155 | 96 | 5 | 10 | 159 | 17 | 162 | 3.30e-11 | 65.1 |
MS.gene009405.t1 | MTR_7g067120 | 23.230 | 452 | 243 | 16 | 8 | 407 | 7 | 406 | 1.88e-14 | 75.5 |
MS.gene009405.t1 | MTR_8g006270 | 26.765 | 340 | 191 | 13 | 8 | 332 | 4 | 300 | 2.07e-14 | 75.5 |
MS.gene009405.t1 | MTR_8g071070 | 25.135 | 370 | 236 | 11 | 4 | 357 | 1 | 345 | 2.12e-14 | 75.5 |
MS.gene009405.t1 | MTR_0078s0060 | 22.177 | 487 | 259 | 15 | 10 | 416 | 6 | 452 | 8.28e-14 | 73.6 |
MS.gene009405.t1 | MTR_4g123553 | 23.491 | 464 | 260 | 19 | 5 | 407 | 9 | 438 | 8.46e-14 | 73.6 |
MS.gene009405.t1 | MTR_6g035295 | 23.460 | 341 | 210 | 13 | 12 | 332 | 14 | 323 | 9.19e-14 | 73.6 |
MS.gene009405.t1 | MTR_2g098430 | 24.412 | 340 | 214 | 12 | 8 | 333 | 4 | 314 | 9.52e-14 | 73.6 |
MS.gene009405.t1 | MTR_6g035185 | 22.892 | 332 | 209 | 12 | 13 | 330 | 14 | 312 | 1.15e-13 | 73.2 |
MS.gene009405.t1 | MTR_8g008990 | 24.251 | 334 | 206 | 12 | 10 | 332 | 6 | 303 | 1.39e-13 | 72.8 |
MS.gene009405.t1 | MTR_5g058330 | 55.932 | 59 | 25 | 1 | 212 | 269 | 11 | 69 | 1.43e-13 | 66.2 |
MS.gene009405.t1 | MTR_0078s0010 | 23.529 | 340 | 202 | 10 | 10 | 332 | 6 | 304 | 2.49e-13 | 72.0 |
MS.gene009405.t1 | MTR_5g090580 | 22.849 | 337 | 216 | 10 | 8 | 332 | 3 | 307 | 5.96e-13 | 70.9 |
MS.gene009405.t1 | MTR_4g128690 | 21.941 | 474 | 281 | 15 | 10 | 430 | 15 | 452 | 8.51e-13 | 70.5 |
MS.gene009405.t1 | MTR_1g107340 | 24.111 | 253 | 167 | 6 | 12 | 257 | 10 | 244 | 1.09e-12 | 68.2 |
MS.gene009405.t1 | MTR_8g012635 | 27.734 | 256 | 142 | 9 | 84 | 332 | 87 | 306 | 2.62e-12 | 68.9 |
MS.gene009405.t1 | MTR_7g106850 | 72.973 | 37 | 9 | 1 | 15 | 50 | 144 | 180 | 4.01e-12 | 65.1 |
MS.gene009405.t1 | MTR_7g102560 | 21.687 | 498 | 292 | 18 | 10 | 431 | 9 | 484 | 8.19e-12 | 67.4 |
MS.gene009405.t1 | MTR_5g090600 | 23.810 | 336 | 210 | 12 | 8 | 332 | 3 | 303 | 9.48e-12 | 67.0 |
MS.gene009405.t1 | MTR_4g082810 | 24.800 | 250 | 160 | 7 | 120 | 358 | 110 | 342 | 1.15e-11 | 66.6 |
MS.gene009405.t1 | MTR_7g012120 | 24.277 | 346 | 211 | 15 | 1 | 331 | 6 | 315 | 1.59e-11 | 66.6 |
MS.gene009405.t1 | MTR_8g012650 | 27.434 | 226 | 133 | 7 | 114 | 332 | 105 | 306 | 1.92e-11 | 66.2 |
MS.gene009405.t1 | MTR_5g029800 | 25.153 | 326 | 205 | 11 | 13 | 330 | 14 | 308 | 3.01e-11 | 65.5 |
MS.gene009405.t1 | MTR_4g117980 | 24.412 | 340 | 194 | 12 | 13 | 330 | 14 | 312 | 4.72e-11 | 65.1 |
MS.gene009405.t1 | MTR_5g098930 | 23.684 | 342 | 200 | 13 | 8 | 332 | 3 | 300 | 7.92e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009405.t1 | AT1G22340 | 48.319 | 476 | 194 | 5 | 8 | 433 | 11 | 484 | 2.65e-164 | 471 |
MS.gene009405.t1 | AT1G22360 | 47.826 | 483 | 201 | 4 | 1 | 434 | 1 | 481 | 2.13e-158 | 456 |
MS.gene009405.t1 | AT1G22400 | 47.500 | 480 | 200 | 5 | 6 | 435 | 9 | 486 | 3.39e-158 | 456 |
MS.gene009405.t1 | AT1G22380 | 47.059 | 476 | 201 | 4 | 8 | 434 | 11 | 484 | 6.63e-155 | 447 |
MS.gene009405.t1 | AT1G22370 | 48.852 | 479 | 189 | 5 | 5 | 434 | 8 | 479 | 2.27e-153 | 443 |
MS.gene009405.t1 | AT1G22360 | 46.584 | 483 | 195 | 5 | 1 | 434 | 1 | 469 | 2.89e-150 | 435 |
MS.gene009405.t1 | AT1G78270 | 43.396 | 477 | 217 | 5 | 5 | 431 | 8 | 481 | 4.57e-139 | 407 |
MS.gene009405.t1 | AT1G22370 | 44.884 | 303 | 118 | 3 | 181 | 434 | 7 | 309 | 1.85e-75 | 238 |
MS.gene009405.t1 | AT5G59590 | 28.875 | 471 | 244 | 13 | 12 | 427 | 12 | 446 | 1.21e-51 | 180 |
MS.gene009405.t1 | AT3G46670 | 28.358 | 469 | 249 | 13 | 12 | 427 | 11 | 445 | 2.93e-49 | 174 |
MS.gene009405.t1 | AT5G59580 | 28.601 | 479 | 246 | 15 | 6 | 427 | 5 | 444 | 1.58e-48 | 172 |
MS.gene009405.t1 | AT3G11340 | 26.681 | 476 | 262 | 13 | 7 | 431 | 6 | 445 | 7.06e-46 | 165 |
MS.gene009405.t1 | AT3G46660 | 28.602 | 472 | 246 | 17 | 12 | 427 | 16 | 452 | 8.44e-46 | 165 |
MS.gene009405.t1 | AT3G46690 | 28.243 | 478 | 249 | 14 | 8 | 428 | 7 | 447 | 9.46e-45 | 162 |
MS.gene009405.t1 | AT2G36970 | 26.749 | 486 | 270 | 14 | 8 | 430 | 8 | 470 | 1.44e-44 | 162 |
MS.gene009405.t1 | AT5G38010 | 27.542 | 472 | 255 | 15 | 12 | 428 | 12 | 451 | 1.90e-44 | 161 |
MS.gene009405.t1 | AT3G21560 | 26.735 | 490 | 269 | 15 | 9 | 433 | 11 | 475 | 1.42e-43 | 159 |
MS.gene009405.t1 | AT3G46650 | 26.350 | 463 | 239 | 14 | 7 | 417 | 7 | 419 | 2.26e-43 | 157 |
MS.gene009405.t1 | AT5G05860 | 26.737 | 475 | 262 | 12 | 10 | 432 | 9 | 449 | 1.27e-42 | 156 |
MS.gene009405.t1 | AT3G02100 | 26.496 | 468 | 274 | 15 | 8 | 427 | 11 | 456 | 3.61e-42 | 155 |
MS.gene009405.t1 | AT3G46680 | 27.178 | 482 | 247 | 14 | 8 | 427 | 7 | 446 | 9.76e-42 | 154 |
MS.gene009405.t1 | AT5G05870 | 25.523 | 478 | 268 | 12 | 10 | 430 | 8 | 454 | 1.81e-40 | 150 |
MS.gene009405.t1 | AT3G46700 | 26.598 | 485 | 247 | 18 | 8 | 430 | 7 | 444 | 2.26e-40 | 150 |
MS.gene009405.t1 | AT3G46720 | 28.092 | 477 | 240 | 16 | 8 | 427 | 7 | 437 | 2.29e-39 | 147 |
MS.gene009405.t1 | AT5G38040 | 25.322 | 466 | 257 | 13 | 18 | 428 | 18 | 447 | 1.22e-38 | 145 |
MS.gene009405.t1 | AT5G05900 | 25.316 | 474 | 259 | 12 | 11 | 427 | 9 | 444 | 1.77e-38 | 145 |
MS.gene009405.t1 | AT2G28080 | 26.096 | 479 | 269 | 13 | 14 | 433 | 22 | 474 | 2.00e-37 | 142 |
MS.gene009405.t1 | AT4G15500 | 25.462 | 487 | 268 | 13 | 9 | 431 | 8 | 463 | 2.42e-37 | 142 |
MS.gene009405.t1 | AT4G15490 | 25.806 | 496 | 264 | 19 | 10 | 434 | 8 | 470 | 1.67e-36 | 140 |
MS.gene009405.t1 | AT3G55700 | 25.833 | 480 | 258 | 18 | 12 | 431 | 10 | 451 | 2.95e-36 | 139 |
MS.gene009405.t1 | AT4G15480 | 23.760 | 484 | 282 | 14 | 10 | 430 | 19 | 478 | 1.02e-35 | 138 |
MS.gene009405.t1 | AT5G05890 | 26.050 | 476 | 260 | 14 | 10 | 427 | 8 | 449 | 9.59e-34 | 132 |
MS.gene009405.t1 | AT5G05880 | 25.053 | 475 | 262 | 14 | 10 | 427 | 8 | 445 | 4.27e-33 | 130 |
MS.gene009405.t1 | AT1G05675 | 24.313 | 473 | 274 | 11 | 10 | 427 | 6 | 449 | 9.04e-33 | 129 |
MS.gene009405.t1 | AT2G26480 | 25.000 | 480 | 261 | 16 | 12 | 433 | 10 | 448 | 2.33e-32 | 128 |
MS.gene009405.t1 | AT1G05680 | 23.789 | 475 | 274 | 12 | 10 | 429 | 6 | 447 | 2.34e-32 | 128 |
MS.gene009405.t1 | AT2G43840 | 29.394 | 330 | 193 | 12 | 8 | 332 | 5 | 299 | 3.51e-31 | 124 |
MS.gene009405.t1 | AT4G34131 | 24.547 | 497 | 278 | 16 | 6 | 429 | 6 | 478 | 1.72e-30 | 123 |
MS.gene009405.t1 | AT2G31750 | 24.174 | 484 | 275 | 14 | 7 | 431 | 5 | 455 | 2.77e-30 | 122 |
MS.gene009405.t1 | AT2G43840 | 29.091 | 330 | 194 | 12 | 8 | 332 | 5 | 299 | 3.49e-30 | 122 |
MS.gene009405.t1 | AT2G31750 | 24.174 | 484 | 275 | 14 | 7 | 431 | 5 | 455 | 4.65e-30 | 122 |
MS.gene009405.t1 | AT3G55710 | 26.151 | 478 | 263 | 18 | 12 | 431 | 10 | 455 | 4.29e-29 | 119 |
MS.gene009405.t1 | AT2G23250 | 25.966 | 466 | 254 | 19 | 19 | 430 | 7 | 435 | 4.38e-29 | 118 |
MS.gene009405.t1 | AT2G43820 | 28.399 | 331 | 199 | 13 | 6 | 332 | 3 | 299 | 2.94e-28 | 116 |
MS.gene009405.t1 | AT2G31790 | 23.810 | 483 | 270 | 12 | 8 | 427 | 6 | 453 | 4.26e-27 | 113 |
MS.gene009405.t1 | AT2G15480 | 25.358 | 489 | 279 | 14 | 10 | 430 | 10 | 480 | 5.47e-27 | 113 |
MS.gene009405.t1 | AT4G01070 | 30.114 | 352 | 191 | 12 | 9 | 345 | 7 | 318 | 6.00e-27 | 111 |
MS.gene009405.t1 | AT4G01070 | 30.383 | 339 | 181 | 12 | 9 | 332 | 7 | 305 | 7.68e-27 | 112 |
MS.gene009405.t1 | AT2G15490 | 24.744 | 489 | 282 | 14 | 10 | 430 | 7 | 477 | 4.48e-26 | 110 |
MS.gene009405.t1 | AT2G15480 | 24.850 | 499 | 279 | 14 | 10 | 430 | 10 | 490 | 1.13e-25 | 109 |
MS.gene009405.t1 | AT2G30140 | 23.941 | 472 | 275 | 16 | 10 | 430 | 13 | 451 | 1.41e-25 | 108 |
MS.gene009405.t1 | AT2G15490 | 24.593 | 492 | 282 | 15 | 10 | 430 | 7 | 480 | 1.92e-25 | 108 |
MS.gene009405.t1 | AT2G30140 | 23.941 | 472 | 274 | 16 | 10 | 430 | 13 | 450 | 2.06e-25 | 108 |
MS.gene009405.t1 | AT2G36770 | 27.371 | 369 | 217 | 16 | 10 | 357 | 14 | 352 | 3.16e-25 | 108 |
MS.gene009405.t1 | AT4G15550 | 23.422 | 491 | 280 | 14 | 7 | 429 | 10 | 472 | 5.01e-25 | 107 |
MS.gene009405.t1 | AT1G10400 | 24.792 | 480 | 280 | 19 | 8 | 429 | 5 | 461 | 2.61e-24 | 105 |
MS.gene009405.t1 | AT2G36800 | 28.338 | 367 | 217 | 14 | 10 | 357 | 12 | 351 | 3.63e-24 | 105 |
MS.gene009405.t1 | AT5G37950 | 27.729 | 339 | 205 | 14 | 25 | 357 | 1 | 305 | 4.99e-24 | 102 |
MS.gene009405.t1 | AT4G34135 | 27.299 | 348 | 204 | 12 | 6 | 332 | 7 | 326 | 5.35e-24 | 102 |
MS.gene009405.t1 | AT2G23260 | 25.000 | 480 | 269 | 17 | 10 | 432 | 10 | 455 | 7.17e-24 | 103 |
MS.gene009405.t1 | AT1G30530 | 23.126 | 467 | 284 | 11 | 11 | 431 | 14 | 451 | 8.07e-24 | 103 |
MS.gene009405.t1 | AT4G14090 | 22.449 | 490 | 278 | 16 | 2 | 429 | 5 | 454 | 9.34e-24 | 103 |
MS.gene009405.t1 | AT2G36790 | 26.772 | 508 | 254 | 21 | 10 | 431 | 13 | 488 | 1.05e-23 | 103 |
MS.gene009405.t1 | AT4G34135 | 27.479 | 353 | 197 | 13 | 6 | 332 | 7 | 326 | 1.41e-23 | 103 |
MS.gene009405.t1 | AT3G53150 | 24.865 | 370 | 228 | 12 | 10 | 357 | 22 | 363 | 6.47e-23 | 101 |
MS.gene009405.t1 | AT1G05560 | 26.220 | 328 | 198 | 11 | 9 | 330 | 4 | 293 | 8.74e-23 | 100 |
MS.gene009405.t1 | AT2G36760 | 24.200 | 500 | 277 | 19 | 10 | 431 | 14 | 489 | 1.06e-22 | 100 |
MS.gene009405.t1 | AT2G36780 | 27.123 | 365 | 223 | 11 | 10 | 357 | 14 | 352 | 1.07e-22 | 100 |
MS.gene009405.t1 | AT1G05560 | 26.220 | 328 | 198 | 11 | 9 | 330 | 54 | 343 | 1.23e-22 | 100 |
MS.gene009405.t1 | AT2G16890 | 24.449 | 499 | 259 | 20 | 10 | 430 | 9 | 467 | 2.16e-22 | 99.8 |
MS.gene009405.t1 | AT3G53160 | 27.548 | 363 | 224 | 14 | 10 | 357 | 8 | 346 | 3.35e-22 | 99.4 |
MS.gene009405.t1 | AT1G01420 | 26.186 | 485 | 262 | 17 | 9 | 426 | 7 | 462 | 3.70e-22 | 99.0 |
MS.gene009405.t1 | AT2G30150 | 22.081 | 471 | 286 | 14 | 10 | 430 | 13 | 452 | 3.79e-22 | 99.0 |
MS.gene009405.t1 | AT1G01420 | 26.186 | 485 | 262 | 17 | 9 | 426 | 10 | 465 | 4.02e-22 | 99.0 |
MS.gene009405.t1 | AT5G37950 | 27.515 | 338 | 201 | 13 | 25 | 357 | 1 | 299 | 5.18e-22 | 97.1 |
MS.gene009405.t1 | AT5G66690 | 22.530 | 506 | 266 | 16 | 7 | 429 | 4 | 466 | 6.46e-22 | 98.2 |
MS.gene009405.t1 | AT1G05530 | 22.607 | 491 | 277 | 16 | 7 | 431 | 2 | 455 | 9.14e-22 | 97.8 |
MS.gene009405.t1 | AT5G26310 | 22.376 | 505 | 268 | 16 | 7 | 429 | 4 | 466 | 1.42e-21 | 97.4 |
MS.gene009405.t1 | AT2G36750 | 26.027 | 365 | 226 | 16 | 10 | 357 | 10 | 347 | 6.68e-21 | 95.5 |
MS.gene009405.t1 | AT5G14860 | 25.000 | 504 | 259 | 23 | 10 | 430 | 8 | 475 | 7.77e-21 | 95.1 |
MS.gene009405.t1 | AT2G30150 | 21.842 | 467 | 284 | 14 | 14 | 430 | 1 | 436 | 8.67e-21 | 94.7 |
MS.gene009405.t1 | AT1G01390 | 28.531 | 354 | 212 | 13 | 5 | 353 | 4 | 321 | 9.08e-21 | 94.7 |
MS.gene009405.t1 | AT1G01390 | 28.531 | 354 | 212 | 13 | 5 | 353 | 21 | 338 | 1.12e-20 | 94.7 |
MS.gene009405.t1 | AT1G51210 | 27.072 | 362 | 212 | 15 | 5 | 357 | 15 | 333 | 3.10e-20 | 92.8 |
MS.gene009405.t1 | AT5G03490 | 24.948 | 485 | 266 | 19 | 6 | 429 | 14 | 461 | 3.89e-20 | 92.8 |
MS.gene009405.t1 | AT5G17050 | 21.895 | 475 | 289 | 12 | 10 | 431 | 12 | 457 | 3.89e-20 | 92.8 |
MS.gene009405.t1 | AT1G24100 | 22.840 | 486 | 276 | 17 | 8 | 430 | 9 | 458 | 6.65e-20 | 92.0 |
MS.gene009405.t1 | AT3G22250 | 22.727 | 462 | 265 | 13 | 8 | 403 | 6 | 441 | 5.80e-19 | 89.4 |
MS.gene009405.t1 | AT5G17040 | 21.474 | 475 | 281 | 11 | 10 | 431 | 5 | 440 | 1.46e-18 | 87.8 |
MS.gene009405.t1 | AT3G21780 | 28.097 | 331 | 203 | 11 | 8 | 332 | 2 | 303 | 3.11e-17 | 84.0 |
MS.gene009405.t1 | AT5G17030 | 22.059 | 476 | 286 | 16 | 10 | 431 | 12 | 456 | 3.31e-17 | 84.0 |
MS.gene009405.t1 | AT2G16890 | 25.916 | 382 | 219 | 18 | 10 | 369 | 9 | 348 | 6.09e-17 | 82.8 |
MS.gene009405.t1 | AT1G73880 | 25.050 | 499 | 271 | 21 | 2 | 431 | 3 | 467 | 6.52e-17 | 83.2 |
MS.gene009405.t1 | AT3G50740 | 24.412 | 340 | 207 | 10 | 7 | 333 | 4 | 306 | 1.13e-16 | 82.4 |
MS.gene009405.t1 | AT5G49690 | 23.691 | 363 | 238 | 12 | 1 | 357 | 1 | 330 | 1.34e-16 | 82.0 |
MS.gene009405.t1 | AT5G17040 | 23.000 | 300 | 179 | 6 | 176 | 431 | 47 | 338 | 1.82e-16 | 80.9 |
MS.gene009405.t1 | AT3G16520 | 25.610 | 246 | 155 | 8 | 119 | 357 | 113 | 337 | 1.97e-16 | 81.6 |
MS.gene009405.t1 | AT3G16520 | 25.403 | 248 | 157 | 8 | 119 | 359 | 113 | 339 | 2.05e-16 | 81.6 |
MS.gene009405.t1 | AT3G16520 | 25.403 | 248 | 157 | 8 | 119 | 359 | 113 | 339 | 2.31e-16 | 81.3 |
MS.gene009405.t1 | AT3G21790 | 25.526 | 333 | 210 | 9 | 12 | 332 | 6 | 312 | 5.52e-16 | 80.5 |
MS.gene009405.t1 | AT5G65550 | 24.793 | 363 | 238 | 12 | 4 | 357 | 1 | 337 | 1.17e-15 | 79.3 |
MS.gene009405.t1 | AT3G21800 | 25.455 | 330 | 210 | 10 | 12 | 332 | 7 | 309 | 1.78e-15 | 78.6 |
MS.gene009405.t1 | AT2G18560 | 24.595 | 309 | 142 | 11 | 188 | 423 | 79 | 369 | 5.08e-14 | 73.6 |
MS.gene009405.t1 | AT2G23210 | 25.743 | 303 | 188 | 13 | 1 | 299 | 1 | 270 | 2.01e-13 | 70.9 |
MS.gene009405.t1 | AT4G15280 | 26.727 | 333 | 202 | 12 | 12 | 332 | 6 | 308 | 1.47e-11 | 66.6 |
MS.gene009405.t1 | AT4G15280 | 26.727 | 333 | 202 | 12 | 12 | 332 | 38 | 340 | 1.98e-11 | 66.2 |
MS.gene009405.t1 | AT3G21760 | 24.496 | 347 | 199 | 10 | 12 | 332 | 6 | 315 | 5.78e-11 | 64.7 |
MS.gene009405.t1 | AT4G15260 | 26.087 | 207 | 128 | 6 | 129 | 332 | 4 | 188 | 6.73e-11 | 63.9 |
Find 85 sgRNAs with CRISPR-Local
Find 122 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTATCTAACAAATGGATATT+TGG | 0.229612 | 3.4:+3398478 | MS.gene009405:CDS |
TAAGTTCACAGTAGGGTTTA+AGG | 0.267569 | 3.4:-3397830 | None:intergenic |
GAACTTCGACAAAGTTATTA+AGG | 0.274968 | 3.4:+3399360 | MS.gene009405:CDS |
TCTAGTGATGTTAGACCATC+TGG | 0.321083 | 3.4:-3397747 | None:intergenic |
CGCCTTCTTCTTCAATTCCA+TGG | 0.324635 | 3.4:-3399302 | None:intergenic |
GCAAAACTACTTCACCTTAG+AGG | 0.327381 | 3.4:+3397618 | MS.gene009405:CDS |
ATTGATGAATTTGTGGAGTT+TGG | 0.329616 | 3.4:-3398745 | None:intergenic |
ACAAAAGTAGATTGGATTCC+AGG | 0.332750 | 3.4:+3398503 | MS.gene009405:CDS |
AACTCCACAAATTCATCAAT+TGG | 0.344444 | 3.4:+3398748 | MS.gene009405:CDS |
AATAAAGAACATGCACTTGA+TGG | 0.347416 | 3.4:-3397972 | None:intergenic |
AATTCTAACATAATATCGTT+TGG | 0.350657 | 3.4:-3398578 | None:intergenic |
TATGACTCCGGAGCAACTTC+AGG | 0.353198 | 3.4:+3398877 | MS.gene009405:CDS |
TCTGTTGTTTATGTGAATTT+TGG | 0.355712 | 3.4:+3398842 | MS.gene009405:CDS |
GTGGACACCAACTTGCTATT+AGG | 0.356812 | 3.4:-3399021 | None:intergenic |
GCAACTTCAGGAATTTGCTT+GGG | 0.357943 | 3.4:+3398889 | MS.gene009405:CDS |
ATTTGTAATGAATGGAAGAT+TGG | 0.360252 | 3.4:+3399184 | MS.gene009405:CDS |
ATATGGCCTTGAGCTGGATA+TGG | 0.361172 | 3.4:-3397576 | None:intergenic |
ATTCTTTAGATTCCAACCTT+TGG | 0.362742 | 3.4:+3398771 | MS.gene009405:CDS |
TTCACATAAACAACAGATCT+TGG | 0.367861 | 3.4:-3398836 | None:intergenic |
ATTTGGAAACAAAAGTAGAT+TGG | 0.372644 | 3.4:+3398495 | MS.gene009405:CDS |
GCGAATGAAATTTCAGATAG+AGG | 0.373882 | 3.4:+3398998 | MS.gene009405:CDS |
GTGAAACAATCTAAGGCATT+TGG | 0.376724 | 3.4:-3397702 | None:intergenic |
AGGTTATGTAAAAGCCTCTA+AGG | 0.385615 | 3.4:-3397632 | None:intergenic |
TCAGGAATTTGCTTGGGGCT+TGG | 0.391060 | 3.4:+3398895 | MS.gene009405:CDS |
TCAGAAACTAAGCAAGTAAC+TGG | 0.402772 | 3.4:-3397885 | None:intergenic |
AAAATCAGTGAAACAATCTA+AGG | 0.408184 | 3.4:-3397709 | None:intergenic |
GTAGATTTATTTGTAATGAA+TGG | 0.414788 | 3.4:+3399176 | MS.gene009405:CDS |
GCTTGAACAATGGATTGATA+TGG | 0.418364 | 3.4:-3397593 | None:intergenic |
CATATTCTTTCCTTCATCTC+CGG | 0.426958 | 3.4:-3399269 | None:intergenic |
AGCAACTTCAGGAATTTGCT+TGG | 0.434954 | 3.4:+3398888 | MS.gene009405:CDS |
GAATCCAATTGATGAATTTG+TGG | 0.435101 | 3.4:-3398752 | None:intergenic |
GATATCTTCTTTCCAAAGGT+TGG | 0.437371 | 3.4:-3398783 | None:intergenic |
GGTTCAATAATGAAGGTAAA+GGG | 0.439407 | 3.4:-3398724 | None:intergenic |
GGAGTTTGGTTCAATAATGA+AGG | 0.439737 | 3.4:-3398731 | None:intergenic |
TTTCGTTCCTTTGTAGAAAG+AGG | 0.447329 | 3.4:+3398008 | MS.gene009405:CDS |
GATGAGAGTTATCTAACAAA+TGG | 0.452799 | 3.4:+3398470 | MS.gene009405:intron |
GGCGGAGGAGAACACTAAAC+CGG | 0.455237 | 3.4:+3399321 | MS.gene009405:CDS |
ATTCCTTATGTTTACCCGAT+TGG | 0.455975 | 3.4:+3398701 | MS.gene009405:CDS |
AATGAAGGTAAAGGGCCAAT+CGG | 0.457592 | 3.4:-3398716 | None:intergenic |
AGGAAAGAATATGAGAGAAA+AGG | 0.470738 | 3.4:+3399279 | MS.gene009405:CDS |
TGGTTCAATAATGAAGGTAA+AGG | 0.485974 | 3.4:-3398725 | None:intergenic |
GACTTAGCAGTACCTTTGAA+TGG | 0.487769 | 3.4:-3398038 | None:intergenic |
GGGCCAATCGGGTAAACATA+AGG | 0.490912 | 3.4:-3398704 | None:intergenic |
ATGAAGGTAAAGGGCCAATC+GGG | 0.500209 | 3.4:-3398715 | None:intergenic |
CAACTTCAGGAATTTGCTTG+GGG | 0.503520 | 3.4:+3398890 | MS.gene009405:CDS |
ACTAGGCCCGATCTTGTCAT+TGG | 0.504474 | 3.4:+3398947 | MS.gene009405:CDS |
GATGGTCTAACATCACTAGA+AGG | 0.505360 | 3.4:+3397750 | MS.gene009405:CDS |
GAGCCACCAATGACAAGATC+GGG | 0.506628 | 3.4:-3398953 | None:intergenic |
TCTAGTAATAAGTTCACAGT+AGG | 0.506695 | 3.4:-3397838 | None:intergenic |
GAATTGATAGCCGGAGATGA+AGG | 0.510756 | 3.4:+3399259 | MS.gene009405:CDS |
TAATGAATGGAAGATTGGTA+TGG | 0.522438 | 3.4:+3399189 | MS.gene009405:CDS |
GCAAATTCCTGAAGTTGCTC+CGG | 0.524094 | 3.4:-3398884 | None:intergenic |
TGAGCCACCAATGACAAGAT+CGG | 0.532905 | 3.4:-3398954 | None:intergenic |
TCTTCAATGGCTTGAATCGA+AGG | 0.535713 | 3.4:+3398811 | MS.gene009405:CDS |
AGGCCCGATCTTGTCATTGG+TGG | 0.537931 | 3.4:+3398950 | MS.gene009405:CDS |
CTTATAGATTGACAAAGAGA+AGG | 0.544169 | 3.4:-3397798 | None:intergenic |
GGCCATGGAATTGAAGAAGA+AGG | 0.544327 | 3.4:+3399300 | MS.gene009405:CDS |
AAGATATCGAGTGTCTTCAA+TGG | 0.554080 | 3.4:+3398798 | MS.gene009405:CDS |
GGATTGATATGGCCTTGAGC+TGG | 0.560144 | 3.4:-3397582 | None:intergenic |
GAATGTGAAGAGAGAGGAGG+TGG | 0.563109 | 3.4:+3399222 | MS.gene009405:CDS |
ACTCGATATCTTCTTTCCAA+AGG | 0.563526 | 3.4:-3398787 | None:intergenic |
CTGATCAATGAATTGATAGC+CGG | 0.567126 | 3.4:+3399250 | MS.gene009405:CDS |
AGCTTTGAAACCATCCCAGA+TGG | 0.571170 | 3.4:+3397732 | MS.gene009405:CDS |
GAATATGAGAGAAAAGGCCA+TGG | 0.574029 | 3.4:+3399285 | MS.gene009405:CDS |
GTAAACATAAGGAATTATAG+AGG | 0.579325 | 3.4:-3398693 | None:intergenic |
TTGATTCCATATCCAGCTCA+AGG | 0.594605 | 3.4:+3397570 | MS.gene009405:CDS |
CTAGTGATGTTAGACCATCT+GGG | 0.609090 | 3.4:-3397746 | None:intergenic |
TTCATGTATGAACAACCACC+CGG | 0.610555 | 3.4:-3399340 | None:intergenic |
AAACGCTTGCTCAAATCAAG+AGG | 0.611360 | 3.4:+3397678 | MS.gene009405:CDS |
GGAATTGAAGAAGAAGGCGG+AGG | 0.613364 | 3.4:+3399306 | MS.gene009405:CDS |
AGAGGCATCACACCATTCAA+AGG | 0.614365 | 3.4:+3398026 | MS.gene009405:CDS |
TATGGAATCAACACAGCATG+TGG | 0.616639 | 3.4:-3397558 | None:intergenic |
TGATGTTAGACCATCTGGGA+TGG | 0.618549 | 3.4:-3397742 | None:intergenic |
CTAGTAATAAGTTCACAGTA+GGG | 0.625306 | 3.4:-3397837 | None:intergenic |
GAAACTAAGCAAGTAACTGG+TGG | 0.626441 | 3.4:-3397882 | None:intergenic |
AAGCATTACAGTTATGACTC+CGG | 0.627386 | 3.4:+3398865 | MS.gene009405:CDS |
TGTGATGCCTCTTTCTACAA+AGG | 0.638539 | 3.4:-3398015 | None:intergenic |
CTAACATCACTAGAAGGTGA+TGG | 0.647205 | 3.4:+3397756 | MS.gene009405:CDS |
CGATACGAATGTGAAGAGAG+AGG | 0.648365 | 3.4:+3399216 | MS.gene009405:CDS |
GCAAGTAACTGGTGGAACAG+TGG | 0.651625 | 3.4:-3397874 | None:intergenic |
GCGGAGGAGAACACTAAACC+GGG | 0.664155 | 3.4:+3399322 | MS.gene009405:CDS |
ATTGTATTCAGTGTTGACAA+AGG | 0.675767 | 3.4:-3397652 | None:intergenic |
CATGGAATTGAAGAAGAAGG+CGG | 0.693462 | 3.4:+3399303 | MS.gene009405:CDS |
TACGAATGTGAAGAGAGAGG+AGG | 0.708664 | 3.4:+3399219 | MS.gene009405:CDS |
GAGGAGAACACTAAACCGGG+TGG | 0.750852 | 3.4:+3399325 | MS.gene009405:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATAGTTTTAGAAAAATAAAA+TGG | - | chr3.4:3398179-3398198 | None:intergenic | 10.0% |
!!! | ATTTTTCTAAAACTATTGAA+GGG | + | chr3.4:3398183-3398202 | MS.gene009405:intron | 15.0% |
!!! | TAATGATAGATAATTTTACA+AGG | + | chr3.4:3398219-3398238 | MS.gene009405:intron | 15.0% |
!!! | TATTTTTCTAAAACTATTGA+AGG | + | chr3.4:3398182-3398201 | MS.gene009405:intron | 15.0% |
!! | AATTCTAACATAATATCGTT+TGG | - | chr3.4:3398581-3398600 | None:intergenic | 20.0% |
!! | GTAGATTTATTTGTAATGAA+TGG | + | chr3.4:3399176-3399195 | MS.gene009405:CDS | 20.0% |
!! | TACAAAAGTTAATAGTTTGA+AGG | - | chr3.4:3398437-3398456 | None:intergenic | 20.0% |
!! | TTATCTAACAAATGGATATT+TGG | + | chr3.4:3398478-3398497 | MS.gene009405:CDS | 20.0% |
!!! | TTTTTCTAAAACTATTGAAG+GGG | + | chr3.4:3398184-3398203 | MS.gene009405:intron | 20.0% |
! | AAAATCAGTGAAACAATCTA+AGG | - | chr3.4:3397712-3397731 | None:intergenic | 25.0% |
! | ATGGAAAAAAGAGAACATTA+GGG | - | chr3.4:3397956-3397975 | None:intergenic | 25.0% |
! | ATTTGGAAACAAAAGTAGAT+TGG | + | chr3.4:3398495-3398514 | MS.gene009405:CDS | 25.0% |
! | ATTTGTAATGAATGGAAGAT+TGG | + | chr3.4:3399184-3399203 | MS.gene009405:CDS | 25.0% |
! | GTAAACATAAGGAATTATAG+AGG | - | chr3.4:3398696-3398715 | None:intergenic | 25.0% |
! | TATATGTCAAGAGTTAATCT+TGG | - | chr3.4:3398142-3398161 | None:intergenic | 25.0% |
!! | TTCCAGGTTTGAAAAATTTT+CGG | + | chr3.4:3398519-3398538 | MS.gene009405:CDS | 25.0% |
!! | TTTGAAAAATTTTCGGTTGA+AGG | + | chr3.4:3398526-3398545 | MS.gene009405:CDS | 25.0% |
!!! | TCTGTTGTTTATGTGAATTT+TGG | + | chr3.4:3398842-3398861 | MS.gene009405:CDS | 25.0% |
!!! | TTTTCTAAAACTATTGAAGG+GGG | + | chr3.4:3398185-3398204 | MS.gene009405:intron | 25.0% |
AAAAATGGCCAACATAACAT+TGG | - | chr3.4:3399136-3399155 | None:intergenic | 30.0% | |
AACTCCACAAATTCATCAAT+TGG | + | chr3.4:3398748-3398767 | MS.gene009405:CDS | 30.0% | |
AATAAAGAACATGCACTTGA+TGG | - | chr3.4:3397975-3397994 | None:intergenic | 30.0% | |
ACTCGATTAACGAATCTATA+AGG | - | chr3.4:3398270-3398289 | None:intergenic | 30.0% | |
AGGAAAGAATATGAGAGAAA+AGG | + | chr3.4:3399279-3399298 | MS.gene009405:CDS | 30.0% | |
ATTCTTTAGATTCCAACCTT+TGG | + | chr3.4:3398771-3398790 | MS.gene009405:CDS | 30.0% | |
ATTGATGAATTTGTGGAGTT+TGG | - | chr3.4:3398748-3398767 | None:intergenic | 30.0% | |
CAAATAAATCTACAGTCTGT+TGG | - | chr3.4:3399169-3399188 | None:intergenic | 30.0% | |
CTAGTAATAAGTTCACAGTA+GGG | - | chr3.4:3397840-3397859 | None:intergenic | 30.0% | |
CTTATAGATTGACAAAGAGA+AGG | - | chr3.4:3397801-3397820 | None:intergenic | 30.0% | |
GAACTTCGACAAAGTTATTA+AGG | + | chr3.4:3399360-3399379 | MS.gene009405:CDS | 30.0% | |
GAATCCAATTGATGAATTTG+TGG | - | chr3.4:3398755-3398774 | None:intergenic | 30.0% | |
GATGAGAGTTATCTAACAAA+TGG | + | chr3.4:3398470-3398489 | MS.gene009405:intron | 30.0% | |
GATGGAAAAAAGAGAACATT+AGG | - | chr3.4:3397957-3397976 | None:intergenic | 30.0% | |
GGTTCAATAATGAAGGTAAA+GGG | - | chr3.4:3398727-3398746 | None:intergenic | 30.0% | |
TAATGAATGGAAGATTGGTA+TGG | + | chr3.4:3399189-3399208 | MS.gene009405:CDS | 30.0% | |
TCTAGTAATAAGTTCACAGT+AGG | - | chr3.4:3397841-3397860 | None:intergenic | 30.0% | |
TGGTTCAATAATGAAGGTAA+AGG | - | chr3.4:3398728-3398747 | None:intergenic | 30.0% | |
TTCACATAAACAACAGATCT+TGG | - | chr3.4:3398839-3398858 | None:intergenic | 30.0% | |
TTCATATACACACACATATG+AGG | - | chr3.4:3398414-3398433 | None:intergenic | 30.0% | |
!! | AACCGAAAATTTTTCAAACC+TGG | - | chr3.4:3398524-3398543 | None:intergenic | 30.0% |
!! | ATTGTATTCAGTGTTGACAA+AGG | - | chr3.4:3397655-3397674 | None:intergenic | 30.0% |
!! | TTTCTAAAACTATTGAAGGG+GGG | + | chr3.4:3398186-3398205 | MS.gene009405:intron | 30.0% |
!!! | AGAGTTTTTAATTTGACGGT+TGG | - | chr3.4:3398303-3398322 | None:intergenic | 30.0% |
!!! | AGCGAGAGTTTTTAATTTGA+CGG | - | chr3.4:3398307-3398326 | None:intergenic | 30.0% |
!!! | ATAGCAAGACACTATTTTTG+TGG | + | chr3.4:3398921-3398940 | MS.gene009405:CDS | 30.0% |
AAGATATCGAGTGTCTTCAA+TGG | + | chr3.4:3398798-3398817 | MS.gene009405:CDS | 35.0% | |
AAGCATTACAGTTATGACTC+CGG | + | chr3.4:3398865-3398884 | MS.gene009405:CDS | 35.0% | |
ACAAAAGTAGATTGGATTCC+AGG | + | chr3.4:3398503-3398522 | MS.gene009405:CDS | 35.0% | |
ACTCGATATCTTCTTTCCAA+AGG | - | chr3.4:3398790-3398809 | None:intergenic | 35.0% | |
AGGTTATGTAAAAGCCTCTA+AGG | - | chr3.4:3397635-3397654 | None:intergenic | 35.0% | |
ATTCCTTATGTTTACCCGAT+TGG | + | chr3.4:3398701-3398720 | MS.gene009405:CDS | 35.0% | |
CATATTCTTTCCTTCATCTC+CGG | - | chr3.4:3399272-3399291 | None:intergenic | 35.0% | |
GATATCTTCTTTCCAAAGGT+TGG | - | chr3.4:3398786-3398805 | None:intergenic | 35.0% | |
GCGAATGAAATTTCAGATAG+AGG | + | chr3.4:3398998-3399017 | MS.gene009405:CDS | 35.0% | |
TAAGTTCACAGTAGGGTTTA+AGG | - | chr3.4:3397833-3397852 | None:intergenic | 35.0% | |
TCAGAAACTAAGCAAGTAAC+TGG | - | chr3.4:3397888-3397907 | None:intergenic | 35.0% | |
TTTCGTTCCTTTGTAGAAAG+AGG | + | chr3.4:3398008-3398027 | MS.gene009405:CDS | 35.0% | |
! | CTGATCAATGAATTGATAGC+CGG | + | chr3.4:3399250-3399269 | MS.gene009405:CDS | 35.0% |
! | GGAGTTTGGTTCAATAATGA+AGG | - | chr3.4:3398734-3398753 | None:intergenic | 35.0% |
! | GTGAAACAATCTAAGGCATT+TGG | - | chr3.4:3397705-3397724 | None:intergenic | 35.0% |
!! | AGTTTTGCTAGCTTGAACAA+TGG | - | chr3.4:3397606-3397625 | None:intergenic | 35.0% |
!! | GCTTGAACAATGGATTGATA+TGG | - | chr3.4:3397596-3397615 | None:intergenic | 35.0% |
!!! | CACTATTTTTGTGGATCACT+AGG | + | chr3.4:3398930-3398949 | MS.gene009405:CDS | 35.0% |
AAACGCTTGCTCAAATCAAG+AGG | + | chr3.4:3397678-3397697 | MS.gene009405:CDS | 40.0% | |
AATGAAGGTAAAGGGCCAAT+CGG | - | chr3.4:3398719-3398738 | None:intergenic | 40.0% | |
ATAGAGGCCTAATAGCAAGT+TGG | + | chr3.4:3399014-3399033 | MS.gene009405:intron | 40.0% | |
CATGGAATTGAAGAAGAAGG+CGG | + | chr3.4:3399303-3399322 | MS.gene009405:CDS | 40.0% | |
CTAACATCACTAGAAGGTGA+TGG | + | chr3.4:3397756-3397775 | MS.gene009405:CDS | 40.0% | |
CTAGTGATGTTAGACCATCT+GGG | - | chr3.4:3397749-3397768 | None:intergenic | 40.0% | |
GAAACTAAGCAAGTAACTGG+TGG | - | chr3.4:3397885-3397904 | None:intergenic | 40.0% | |
GAATATGAGAGAAAAGGCCA+TGG | + | chr3.4:3399285-3399304 | MS.gene009405:CDS | 40.0% | |
GACTTAGCAGTACCTTTGAA+TGG | - | chr3.4:3398041-3398060 | None:intergenic | 40.0% | |
GATGGTCTAACATCACTAGA+AGG | + | chr3.4:3397750-3397769 | MS.gene009405:CDS | 40.0% | |
GCAAAACTACTTCACCTTAG+AGG | + | chr3.4:3397618-3397637 | MS.gene009405:CDS | 40.0% | |
TATGGAATCAACACAGCATG+TGG | - | chr3.4:3397561-3397580 | None:intergenic | 40.0% | |
TCTAGTGATGTTAGACCATC+TGG | - | chr3.4:3397750-3397769 | None:intergenic | 40.0% | |
TCTTCAATGGCTTGAATCGA+AGG | + | chr3.4:3398811-3398830 | MS.gene009405:CDS | 40.0% | |
TGGTTCAACACTTTCTCTTG+TGG | - | chr3.4:3399043-3399062 | None:intergenic | 40.0% | |
TGTGATGCCTCTTTCTACAA+AGG | - | chr3.4:3398018-3398037 | None:intergenic | 40.0% | |
TTCATGTATGAACAACCACC+CGG | - | chr3.4:3399343-3399362 | None:intergenic | 40.0% | |
TTGATTCCATATCCAGCTCA+AGG | + | chr3.4:3397570-3397589 | MS.gene009405:CDS | 40.0% | |
! | AGCAACTTCAGGAATTTGCT+TGG | + | chr3.4:3398888-3398907 | MS.gene009405:CDS | 40.0% |
! | CAACTTCAGGAATTTGCTTG+GGG | + | chr3.4:3398890-3398909 | MS.gene009405:CDS | 40.0% |
! | GCAACTTCAGGAATTTGCTT+GGG | + | chr3.4:3398889-3398908 | MS.gene009405:CDS | 40.0% |
! | TCAAGAATCCACCGATTGAA+GGG | - | chr3.4:3399066-3399085 | None:intergenic | 40.0% |
ATGAAGGTAAAGGGCCAATC+GGG | - | chr3.4:3398718-3398737 | None:intergenic | 45.0% | |
CGATACGAATGTGAAGAGAG+AGG | + | chr3.4:3399216-3399235 | MS.gene009405:CDS | 45.0% | |
CGCCTTCTTCTTCAATTCCA+TGG | - | chr3.4:3399305-3399324 | None:intergenic | 45.0% | |
GATTCTTGACTCATTGCGGA+TGG | + | chr3.4:3399077-3399096 | MS.gene009405:intron | 45.0% | |
GCAAATTCCTGAAGTTGCTC+CGG | - | chr3.4:3398887-3398906 | None:intergenic | 45.0% | |
GGCCATGGAATTGAAGAAGA+AGG | + | chr3.4:3399300-3399319 | MS.gene009405:CDS | 45.0% | |
GTGTTGAACCACCCTTCAAT+CGG | + | chr3.4:3399052-3399071 | MS.gene009405:intron | 45.0% | |
GTTGGCTGATCGGCAAAAAA+TGG | - | chr3.4:3399151-3399170 | None:intergenic | 45.0% | |
TACGAATGTGAAGAGAGAGG+AGG | + | chr3.4:3399219-3399238 | MS.gene009405:CDS | 45.0% | |
TCCAGCACATATGCTTTCAG+TGG | - | chr3.4:3399110-3399129 | None:intergenic | 45.0% | |
TGAGCCACCAATGACAAGAT+CGG | - | chr3.4:3398957-3398976 | None:intergenic | 45.0% | |
TGATGTTAGACCATCTGGGA+TGG | - | chr3.4:3397745-3397764 | None:intergenic | 45.0% | |
! | ACCACTGAAAGCATATGTGC+TGG | + | chr3.4:3399106-3399125 | MS.gene009405:intron | 45.0% |
! | ATATGGCCTTGAGCTGGATA+TGG | - | chr3.4:3397579-3397598 | None:intergenic | 45.0% |
! | CTGGAGTGCCAATGTTATGT+TGG | + | chr3.4:3399125-3399144 | MS.gene009405:intron | 45.0% |
! | GAATTGATAGCCGGAGATGA+AGG | + | chr3.4:3399259-3399278 | MS.gene009405:CDS | 45.0% |
! | GGTGGATTCTTGACTCATTG+CGG | + | chr3.4:3399073-3399092 | MS.gene009405:intron | 45.0% |
! | GTCAAGAATCCACCGATTGA+AGG | - | chr3.4:3399067-3399086 | None:intergenic | 45.0% |
! | TCTACAGTCTGTTGGCTGAT+CGG | - | chr3.4:3399161-3399180 | None:intergenic | 45.0% |
!! | AGAGGCATCACACCATTCAA+AGG | + | chr3.4:3398026-3398045 | MS.gene009405:CDS | 45.0% |
!! | AGCTTTGAAACCATCCCAGA+TGG | + | chr3.4:3397732-3397751 | MS.gene009405:CDS | 45.0% |
!! | GTGGACACCAACTTGCTATT+AGG | - | chr3.4:3399024-3399043 | None:intergenic | 45.0% |
ACTAGGCCCGATCTTGTCAT+TGG | + | chr3.4:3398947-3398966 | MS.gene009405:CDS | 50.0% | |
GAATGTGAAGAGAGAGGAGG+TGG | + | chr3.4:3399222-3399241 | MS.gene009405:CDS | 50.0% | |
GAGCCACCAATGACAAGATC+GGG | - | chr3.4:3398956-3398975 | None:intergenic | 50.0% | |
GCAAGTAACTGGTGGAACAG+TGG | - | chr3.4:3397877-3397896 | None:intergenic | 50.0% | |
GGAATTGAAGAAGAAGGCGG+AGG | + | chr3.4:3399306-3399325 | MS.gene009405:CDS | 50.0% | |
GGGCCAATCGGGTAAACATA+AGG | - | chr3.4:3398707-3398726 | None:intergenic | 50.0% | |
TATGACTCCGGAGCAACTTC+AGG | + | chr3.4:3398877-3398896 | MS.gene009405:CDS | 50.0% | |
TTGAACCACCCTTCAATCGG+TGG | + | chr3.4:3399055-3399074 | MS.gene009405:intron | 50.0% | |
! | AGAATCCACCGATTGAAGGG+TGG | - | chr3.4:3399063-3399082 | None:intergenic | 50.0% |
! | GGATTGATATGGCCTTGAGC+TGG | - | chr3.4:3397585-3397604 | None:intergenic | 50.0% |
! | TCAGGAATTTGCTTGGGGCT+TGG | + | chr3.4:3398895-3398914 | MS.gene009405:CDS | 50.0% |
AGGCCCGATCTTGTCATTGG+TGG | + | chr3.4:3398950-3398969 | MS.gene009405:CDS | 55.0% | |
GAGGAGAACACTAAACCGGG+TGG | + | chr3.4:3399325-3399344 | MS.gene009405:CDS | 55.0% | |
GCGGAGGAGAACACTAAACC+GGG | + | chr3.4:3399322-3399341 | MS.gene009405:CDS | 55.0% | |
GGCGGAGGAGAACACTAAAC+CGG | + | chr3.4:3399321-3399340 | MS.gene009405:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.4 | gene | 3397534 | 3399405 | 3397534 | ID=MS.gene009405 |
chr3.4 | mRNA | 3397534 | 3399405 | 3397534 | ID=MS.gene009405.t1;Parent=MS.gene009405 |
chr3.4 | exon | 3397534 | 3398047 | 3397534 | ID=MS.gene009405.t1.exon1;Parent=MS.gene009405.t1 |
chr3.4 | CDS | 3397534 | 3398047 | 3397534 | ID=cds.MS.gene009405.t1;Parent=MS.gene009405.t1 |
chr3.4 | exon | 3398471 | 3399031 | 3398471 | ID=MS.gene009405.t1.exon2;Parent=MS.gene009405.t1 |
chr3.4 | CDS | 3398471 | 3399031 | 3398471 | ID=cds.MS.gene009405.t1;Parent=MS.gene009405.t1 |
chr3.4 | exon | 3399173 | 3399405 | 3399173 | ID=MS.gene009405.t1.exon3;Parent=MS.gene009405.t1 |
chr3.4 | CDS | 3399173 | 3399405 | 3399173 | ID=cds.MS.gene009405.t1;Parent=MS.gene009405.t1 |
Gene Sequence |
Protein sequence |