AlfalfaGEDB | MS.gene78850

M. sativa cultivar XinJiangDaYe / MS.gene78850

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene78850.t1	XP_003598165.1	81.3	482	12	2	1	404	1	482	6.00E-218	766.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene78850.t1	F8WKW1	49.4	476	157	6	8	402	9	481	1.4e-122	441.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene78850.t1	G7IVJ7	81.3	482	12	2	1	404	1	482	4.3e-218	766.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050301	MS.gene78850	0.804667	1.94E-49	-1.69E-46
MS.gene056314	MS.gene78850	0.810796	9.64E-51	-1.69E-46
MS.gene058293	MS.gene78850	0.808019	3.80E-50	-1.69E-46
MS.gene058365	MS.gene78850	0.841	6.20E-58	-1.69E-46
MS.gene059692	MS.gene78850	0.810879	9.25E-51	-1.69E-46
MS.gene059695	MS.gene78850	0.800345	1.51E-48	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene78852	MS.gene78850	PPI
MS.gene78850	MS.gene031149	PPI
MS.gene010467	MS.gene78850	PPI
MS.gene78850	MS.gene031133	PPI
MS.gene78850	MS.gene017258	PPI
MS.gene010469	MS.gene78850	PPI
MS.gene78850	MS.gene029597	PPI
MS.gene78850	MS.gene009076	PPI
MS.gene031165	MS.gene78850	PPI
MS.gene78850	MS.gene86093	PPI
MS.gene78850	MS.gene98981	PPI
MS.gene78850	MS.gene95161	PPI
MS.gene78850	MS.gene56827	PPI
MS.gene070166	MS.gene78850	PPI
MS.gene029600	MS.gene78850	PPI
MS.gene41289	MS.gene78850	PPI
MS.gene78850	MS.gene016847	PPI
MS.gene78850	MS.gene026523	PPI
MS.gene78850	MS.gene37295	PPI
MS.gene78850	MS.gene37297	PPI
MS.gene78850	MS.gene031141	PPI
MS.gene78850	MS.gene86118	PPI
MS.gene78850	MS.gene031171	PPI
MS.gene78850	MS.gene86081	PPI
MS.gene78850	MS.gene84770	PPI
MS.gene78850	MS.gene78851	PPI
MS.gene78850	MS.gene22310	PPI
MS.gene031143	MS.gene78850	PPI
MS.gene78850	MS.gene86101	PPI
MS.gene78850	MS.gene032316	PPI
MS.gene78850	MS.gene26235	PPI
MS.gene86089	MS.gene78850	PPI
MS.gene78850	MS.gene065702	PPI
MS.gene78850	MS.gene86109	PPI
MS.gene047862	MS.gene78850	PPI
MS.gene78850	MS.gene86102	PPI
MS.gene009405	MS.gene78850	PPI
MS.gene78850	MS.gene029606	PPI
MS.gene78850	MS.gene82630	PPI
MS.gene71670	MS.gene78850	PPI
MS.gene21993	MS.gene78850	PPI
MS.gene78850	MS.gene89850	PPI
MS.gene021240	MS.gene78850	PPI
MS.gene78850	MS.gene37296	PPI
MS.gene78850	MS.gene027192	PPI
MS.gene031151	MS.gene78850	PPI
MS.gene78850	MS.gene59333	PPI
MS.gene009637	MS.gene78850	PPI
MS.gene59335	MS.gene78850	PPI
MS.gene78850	MS.gene56204	PPI
MS.gene78850	MS.gene25177	PPI
MS.gene78850	MS.gene031152	PPI
MS.gene031157	MS.gene78850	PPI
MS.gene78850	MS.gene029604	PPI
MS.gene86114	MS.gene78850	PPI
MS.gene78850	MS.gene86099	PPI
MS.gene78850	MS.gene029598	PPI
MS.gene78850	MS.gene031167	PPI
MS.gene89852	MS.gene78850	PPI
MS.gene78850	MS.gene031160	PPI
MS.gene78850	MS.gene86120	PPI
MS.gene78850	MS.gene025918	PPI
MS.gene65560	MS.gene78850	PPI
MS.gene78850	MS.gene031158	PPI
MS.gene78850	MS.gene050638	PPI
MS.gene031158	MS.gene78850	PPI
MS.gene058365	MS.gene78850	PPI
MS.gene26235	MS.gene78850	PPI
MS.gene78850	MS.gene031153	PPI
MS.gene37842	MS.gene78850	PPI
MS.gene031159	MS.gene78850	PPI
MS.gene78850	MS.gene32233	PPI
MS.gene031154	MS.gene78850	PPI
MS.gene78851	MS.gene78850	PPI
MS.gene78850	MS.gene031156	PPI
MS.gene78850	MS.gene024453	PPI
MS.gene78850	MS.gene83058	PPI
MS.gene78850	MS.gene39834	PPI
MS.gene78850	MS.gene031164	PPI
MS.gene71667	MS.gene78850	PPI
MS.gene78850	MS.gene029599	PPI
MS.gene78850	MS.gene99403	PPI
MS.gene78850	MS.gene031165	PPI
MS.gene86117	MS.gene78850	PPI
MS.gene78850	MS.gene86089	PPI
MS.gene047750	MS.gene78850	PPI
MS.gene22805	MS.gene78850	PPI
MS.gene78850	MS.gene029608	PPI
MS.gene78850	MS.gene71671	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene78850.t1	MTR_3g008010	81.328	482	12	2	1	404	1	482	0.0	773
MS.gene78850.t1	MTR_6g014290	73.029	482	52	2	1	404	1	482	0.0	699
MS.gene78850.t1	MTR_6g014250	70.747	482	63	2	1	404	1	482	0.0	661
MS.gene78850.t1	MTR_6g014220	67.500	480	78	2	1	402	1	480	0.0	641
MS.gene78850.t1	MTR_6g014170	70.386	466	76	4	1	404	1	466	0.0	631
MS.gene78850.t1	MTR_6g014040	60.905	486	107	5	1	404	1	485	0.0	577
MS.gene78850.t1	MTR_6g013440	61.856	485	102	5	1	403	1	484	0.0	576
MS.gene78850.t1	MTR_6g014020	60.412	485	110	4	1	404	1	484	0.0	576
MS.gene78850.t1	MTR_6g014186	64.480	442	113	4	4	402	1	441	0.0	575
MS.gene78850.t1	MTR_6g014270	60.124	484	109	5	4	404	1	483	0.0	560
MS.gene78850.t1	MTR_6g014310	62.062	485	101	5	1	403	1	484	0.0	555
MS.gene78850.t1	MTR_6g014050	62.551	486	99	5	1	404	1	485	0.0	551
MS.gene78850.t1	MTR_0288s0020	59.794	485	92	5	1	403	1	464	0.0	548
MS.gene78850.t1	MTR_8g007585	64.523	451	58	5	1	404	1	396	0.0	548
MS.gene78850.t1	MTR_8g059425	59.588	485	112	6	1	404	1	482	0.0	544
MS.gene78850.t1	MTR_6g013450	58.557	485	118	5	1	403	1	484	0.0	543
MS.gene78850.t1	MTR_6g014150	59.751	482	112	4	4	404	1	481	0.0	541
MS.gene78850.t1	MTR_6g014200	60.417	480	108	4	4	402	1	479	0.0	541
MS.gene78850.t1	MTR_6g011340	60.124	484	111	4	1	403	1	483	0.0	537
MS.gene78850.t1	MTR_6g013960	57.732	485	123	4	1	404	1	484	0.0	533
MS.gene78850.t1	MTR_6g014187	58.144	485	121	4	1	404	1	484	0.0	533
MS.gene78850.t1	MTR_6g014300	57.407	486	107	6	1	403	1	469	0.0	528
MS.gene78850.t1	MTR_6g013900	57.938	485	121	5	1	404	1	483	0.0	514
MS.gene78850.t1	MTR_7g011470	59.915	469	118	5	1	403	1	465	2.51e-179	508
MS.gene78850.t1	MTR_7g011470	60.000	470	120	5	1	403	1	469	3.11e-179	507
MS.gene78850.t1	MTR_6g013990	58.212	481	121	4	1	402	1	480	6.12e-179	507
MS.gene78850.t1	MTR_6g014240	57.883	463	121	6	4	404	1	451	1.09e-177	503
MS.gene78850.t1	MTR_6g013920	56.818	484	126	5	1	403	1	482	1.52e-177	504
MS.gene78850.t1	MTR_5g058320	55.602	482	121	6	1	403	1	468	1.08e-174	496
MS.gene78850.t1	MTR_6g013680	61.917	386	101	6	55	403	2	378	6.62e-161	457
MS.gene78850.t1	MTR_5g464810	47.146	473	166	7	10	402	12	480	1.28e-147	427
MS.gene78850.t1	MTR_5g064240	47.146	473	166	7	10	402	12	480	1.28e-147	427
MS.gene78850.t1	MTR_5g464760	46.639	476	168	8	8	401	10	481	1.24e-143	417
MS.gene78850.t1	MTR_0036s0220	44.928	483	180	8	1	401	1	479	1.07e-142	415
MS.gene78850.t1	MTR_2g008210	46.105	475	170	6	8	401	9	478	5.29e-142	413
MS.gene78850.t1	MTR_3g479490	41.263	475	197	6	6	400	2	474	8.16e-128	377
MS.gene78850.t1	MTR_0199s0010	67.143	280	55	3	1	244	1	279	5.40e-127	367
MS.gene78850.t1	MTR_3g079480	41.015	473	197	5	8	400	19	489	6.09e-125	370
MS.gene78850.t1	MTR_4g094220	41.561	474	191	7	7	396	4	475	2.44e-122	363
MS.gene78850.t1	MTR_3g479520	39.535	473	204	5	8	400	13	483	1.62e-121	361
MS.gene78850.t1	MTR_8g043470	46.698	424	98	4	59	404	9	382	3.90e-118	349
MS.gene78850.t1	MTR_3g479470	40.127	471	201	4	8	399	11	479	2.42e-114	343
MS.gene78850.t1	MTR_6g013435	58.466	313	90	6	128	403	1	310	3.53e-114	336
MS.gene78850.t1	MTR_6g014160	46.953	443	150	9	1	404	1	397	1.21e-111	333
MS.gene78850.t1	MTR_6g014190	60.153	261	56	2	191	404	32	291	4.44e-103	307
MS.gene78850.t1	MTR_0477s0010	52.226	337	83	7	128	403	1	320	2.24e-98	296
MS.gene78850.t1	MTR_6g014195	68.229	192	58	1	1	189	1	192	5.98e-93	278
MS.gene78850.t1	MTR_6g014185	46.287	404	88	11	47	400	21	345	2.82e-90	277
MS.gene78850.t1	MTR_0475s0020	75.758	132	28	2	1	128	1	132	1.14e-63	203
MS.gene78850.t1	MTR_3g479610	37.942	311	113	4	170	400	3	313	2.47e-63	206
MS.gene78850.t1	MTR_6g013890	48.770	244	61	7	170	369	21	244	8.89e-63	202
MS.gene78850.t1	MTR_0891s0010	39.062	256	107	3	194	400	35	290	2.26e-57	190
MS.gene78850.t1	MTR_3g479620	48.795	166	83	1	6	171	2	165	3.64e-54	177
MS.gene78850.t1	MTR_5g066390	59.259	162	19	1	290	404	58	219	4.34e-54	179
MS.gene78850.t1	MTR_3g069710	28.942	463	231	12	12	400	14	452	8.92e-52	180
MS.gene78850.t1	MTR_3g069690	27.706	462	240	13	12	400	10	450	1.47e-45	163
MS.gene78850.t1	MTR_7g013260	27.473	455	241	14	9	396	5	437	1.72e-41	152
MS.gene78850.t1	MTR_5g031860	26.652	469	256	10	9	399	11	469	2.51e-41	152
MS.gene78850.t1	MTR_4g064987	27.015	459	231	12	12	391	10	443	2.77e-41	152
MS.gene78850.t1	MTR_4g064987	27.815	453	229	14	12	391	10	437	3.72e-41	151
MS.gene78850.t1	MTR_1g107350	25.261	479	251	14	10	399	8	468	5.91e-39	145
MS.gene78850.t1	MTR_7g013240	26.638	458	240	13	9	396	5	436	1.97e-38	144
MS.gene78850.t1	MTR_5g031830	25.212	472	264	11	7	399	9	470	6.50e-38	143
MS.gene78850.t1	MTR_6g038240	24.301	465	272	12	6	403	7	458	6.59e-38	142
MS.gene78850.t1	MTR_5g031840	25.373	469	261	10	9	399	4	461	1.66e-37	141
MS.gene78850.t1	MTR_3g049970	24.842	475	258	11	10	399	9	469	2.44e-37	141
MS.gene78850.t1	MTR_7g013200	27.473	455	241	13	9	396	4	436	3.00e-37	140
MS.gene78850.t1	MTR_7g013180	25.806	465	248	13	9	398	4	446	1.12e-36	139
MS.gene78850.t1	MTR_5g035580	26.338	467	243	16	6	396	9	450	3.56e-36	138
MS.gene78850.t1	MTR_2086s0010	40.116	172	55	2	277	400	1	172	8.49e-36	129
MS.gene78850.t1	MTR_1996s0010	40.116	172	55	2	277	400	1	172	8.49e-36	129
MS.gene78850.t1	MTR_6g038300	26.190	462	258	16	9	401	10	457	1.55e-35	136
MS.gene78850.t1	MTR_8g064870	25.934	482	242	16	12	399	13	473	2.25e-35	136
MS.gene78850.t1	MTR_1g107380	24.000	475	265	13	10	401	13	474	1.04e-34	134
MS.gene78850.t1	MTR_6g038230	25.949	474	239	17	6	396	7	451	9.89e-34	131
MS.gene78850.t1	MTR_7g013220	26.623	462	239	15	9	392	4	443	3.06e-33	129
MS.gene78850.t1	MTR_5g035560	25.265	471	251	16	6	400	7	452	9.38e-33	129
MS.gene78850.t1	MTR_7g080935	24.619	459	248	14	8	391	9	444	2.75e-32	127
MS.gene78850.t1	MTR_8g088560	24.731	465	258	16	10	399	10	457	6.32e-32	126
MS.gene78850.t1	MTR_1g107315	26.205	477	257	14	5	399	5	468	8.25e-32	126
MS.gene78850.t1	MTR_7g080940	25.597	461	241	18	8	391	9	444	1.28e-31	125
MS.gene78850.t1	MTR_1g032490	24.473	474	261	12	10	399	10	470	2.44e-31	124
MS.gene78850.t1	MTR_1g107365	25.482	467	251	16	10	399	45	491	3.15e-31	124
MS.gene78850.t1	MTR_4g095008	23.480	477	271	13	7	404	8	469	8.61e-31	124
MS.gene78850.t1	MTR_6g038200	25.265	471	246	19	6	396	7	451	8.79e-31	123
MS.gene78850.t1	MTR_6g038220	24.416	471	249	17	6	396	7	450	9.31e-31	122
MS.gene78850.t1	MTR_1g107285	25.156	481	240	18	12	399	10	463	4.92e-30	121
MS.gene78850.t1	MTR_1g107375	23.617	470	255	15	10	399	8	453	8.32e-30	120
MS.gene78850.t1	MTR_8g083290	24.330	485	252	18	9	400	2	464	2.96e-29	119
MS.gene78850.t1	MTR_7g080950	24.421	475	247	18	8	400	4	448	3.28e-29	118
MS.gene78850.t1	MTR_5g004940	24.594	431	214	12	10	399	17	377	9.40e-29	116
MS.gene78850.t1	MTR_5g072860	24.947	469	254	16	10	400	18	466	2.04e-28	116
MS.gene78850.t1	MTR_8g064880	24.503	453	237	15	12	373	11	449	2.55e-28	116
MS.gene78850.t1	MTR_1g107360	25.572	481	235	15	12	399	11	461	3.66e-28	115
MS.gene78850.t1	MTR_4g094920	23.651	482	270	15	5	404	19	484	4.50e-28	115
MS.gene78850.t1	MTR_4g485630	24.431	483	262	15	6	399	5	473	1.05e-27	114
MS.gene78850.t1	MTR_7g070610	24.089	494	251	17	10	399	13	486	2.53e-27	113
MS.gene78850.t1	MTR_3g084520	24.590	488	249	20	10	399	6	472	3.42e-26	110
MS.gene78850.t1	MTR_7g055710	24.593	492	248	17	10	398	11	482	6.07e-24	103
MS.gene78850.t1	MTR_7g070860	25.826	484	237	18	10	399	7	462	6.60e-24	103
MS.gene78850.t1	MTR_3g031450	24.790	476	242	17	5	400	13	452	1.32e-23	102
MS.gene78850.t1	MTR_7g070800	24.644	491	248	19	10	399	6	475	1.52e-23	102
MS.gene78850.t1	MTR_6g014000	63.014	73	27	0	328	400	84	156	2.78e-23	102
MS.gene78850.t1	MTR_3g084540	23.457	486	258	16	10	399	6	473	3.41e-23	101
MS.gene78850.t1	MTR_7g070660	26.284	331	180	11	10	301	11	316	6.10e-23	100
MS.gene78850.t1	MTR_8g083280	24.684	474	252	15	12	400	9	462	6.20e-23	100
MS.gene78850.t1	MTR_3g031400	24.051	474	242	19	7	400	15	450	1.26e-22	99.8
MS.gene78850.t1	MTR_7g070930	26.706	337	191	11	5	303	9	327	5.84e-22	98.2
MS.gene78850.t1	MTR_5g098960	26.708	322	189	11	8	301	5	307	1.43e-21	96.7
MS.gene78850.t1	MTR_5g016480	26.703	367	210	16	11	338	9	355	3.18e-21	95.9
MS.gene78850.t1	MTR_4g008630	23.789	475	247	20	12	399	16	462	6.27e-21	94.7
MS.gene78850.t1	MTR_4g024020	27.548	363	201	16	8	326	7	351	1.95e-20	93.6
MS.gene78850.t1	MTR_7g080900	24.359	468	238	22	10	392	12	448	2.10e-20	93.2
MS.gene78850.t1	MTR_8g027885	23.251	486	250	16	9	402	17	471	6.10e-20	92.0
MS.gene78850.t1	MTR_7g070940	24.444	495	242	17	8	399	7	472	7.32e-20	91.7
MS.gene78850.t1	MTR_6g036650	25.843	356	213	13	3	326	10	346	9.39e-20	91.3
MS.gene78850.t1	MTR_7g070780	22.449	490	263	19	10	399	11	483	9.75e-20	91.3
MS.gene78850.t1	MTR_6g033625	23.752	501	243	15	8	404	2	467	1.08e-19	91.3
MS.gene78850.t1	MTR_7g102450	25.714	350	203	13	9	326	10	334	1.37e-19	90.9
MS.gene78850.t1	MTR_7g102490	23.232	495	268	16	8	402	7	489	2.23e-19	90.5
MS.gene78850.t1	MTR_8g027870	24.286	490	240	19	9	402	17	471	2.42e-19	90.1
MS.gene78850.t1	MTR_0078s0200	26.168	321	187	9	10	301	6	305	8.51e-19	86.7
MS.gene78850.t1	MTR_6g042310	24.661	442	240	16	10	376	18	441	9.24e-19	88.2
MS.gene78850.t1	MTR_7g102550	23.975	488	264	15	10	400	9	486	9.87e-19	88.2
MS.gene78850.t1	MTR_0184s0030	26.168	321	187	9	10	301	6	305	1.29e-18	87.8
MS.gene78850.t1	MTR_8g008970	22.336	488	254	14	10	402	6	463	2.36e-18	87.8
MS.gene78850.t1	MTR_7g067330	23.598	428	240	14	8	376	7	406	3.16e-18	86.7
MS.gene78850.t1	MTR_8g465670	27.077	325	169	11	13	301	10	302	3.76e-18	86.7
MS.gene78850.t1	MTR_1g107325	23.441	401	240	13	10	399	8	352	4.21e-18	85.5
MS.gene78850.t1	MTR_4g117950	22.851	477	255	16	13	399	9	462	4.84e-18	86.3
MS.gene78850.t1	MTR_7g070810	22.177	487	258	18	12	399	11	475	1.05e-17	85.1
MS.gene78850.t1	MTR_5g066410	24.566	346	226	11	13	342	1	327	1.86e-17	84.3
MS.gene78850.t1	MTR_1g029540	22.152	474	247	17	15	399	19	459	2.39e-17	84.0
MS.gene78850.t1	MTR_7g071050	24.675	462	201	17	5	374	8	414	3.15e-17	83.6
MS.gene78850.t1	MTR_6g033725	22.708	480	247	15	12	395	6	457	5.29e-17	83.2
MS.gene78850.t1	MTR_7g102460	27.654	358	205	17	8	326	7	349	6.21e-17	82.8
MS.gene78850.t1	MTR_7g046490	25.188	266	119	7	198	396	208	460	8.22e-17	82.4
MS.gene78850.t1	MTR_8g006220	27.108	332	160	12	13	301	9	301	1.20e-16	82.0
MS.gene78850.t1	MTR_4g031800	24.522	314	197	9	13	301	12	310	1.25e-16	82.0
MS.gene78850.t1	MTR_8g009073	26.235	324	181	10	10	301	6	303	1.42e-16	81.6
MS.gene78850.t1	MTR_7g102520	27.245	323	195	14	10	301	12	325	1.56e-16	81.6
MS.gene78850.t1	MTR_8g006710	23.722	489	231	21	6	388	2	454	1.58e-16	81.6
MS.gene78850.t1	MTR_5g067170	25.566	309	196	10	13	299	14	310	1.76e-16	81.6
MS.gene78850.t1	MTR_6g033615	21.748	469	266	12	8	397	2	448	2.02e-16	81.3
MS.gene78850.t1	MTR_0184s0040	27.607	326	175	12	10	301	21	319	2.38e-16	80.9
MS.gene78850.t1	MTR_0078s0190	27.607	326	175	12	10	301	21	319	2.38e-16	80.9
MS.gene78850.t1	MTR_7g117170	22.774	483	238	18	9	388	14	464	3.30e-16	80.5
MS.gene78850.t1	MTR_7g067120	24.235	425	241	15	8	376	7	406	3.46e-16	80.5
MS.gene78850.t1	MTR_6g013970	53.731	67	27	1	127	193	38	100	4.67e-16	77.0
MS.gene78850.t1	MTR_0536s0020	27.419	310	183	9	13	300	21	310	5.19e-16	80.1
MS.gene78850.t1	MTR_4g123553	24.561	456	234	19	5	376	9	438	5.46e-16	79.7
MS.gene78850.t1	MTR_5g040030	21.881	489	264	14	12	399	16	487	7.49e-16	79.7
MS.gene78850.t1	MTR_8g009067	21.605	486	252	13	10	396	6	461	8.31e-16	79.3
MS.gene78850.t1	MTR_4g118000	25.987	304	192	9	13	300	15	301	1.40e-15	78.6
MS.gene78850.t1	MTR_5g090700	25.076	331	187	11	8	301	3	309	1.62e-15	78.6
MS.gene78850.t1	MTR_1g019510	27.219	338	186	14	10	315	6	315	3.35e-15	77.4
MS.gene78850.t1	MTR_5g090660	24.699	332	183	12	8	301	3	305	5.58e-15	77.0
MS.gene78850.t1	MTR_8g006260	27.193	228	119	9	104	302	100	309	7.80e-15	76.3
MS.gene78850.t1	MTR_5g090630	25.936	374	198	16	8	342	3	336	1.06e-14	75.9
MS.gene78850.t1	MTR_4g117960	25.559	313	191	14	13	299	14	310	1.21e-14	75.9
MS.gene78850.t1	MTR_8g009067	23.295	352	165	9	135	396	7	343	1.55e-14	74.7
MS.gene78850.t1	MTR_8g009063	24.702	336	185	13	3	301	6	310	1.68e-14	75.5
MS.gene78850.t1	MTR_4g117890	27.152	302	192	10	13	299	16	304	1.77e-14	75.5
MS.gene78850.t1	MTR_7g047030	24.308	325	187	11	10	301	6	304	2.15e-14	75.1
MS.gene78850.t1	MTR_7g047270	24.308	325	187	11	10	301	6	304	2.15e-14	75.1
MS.gene78850.t1	MTR_7g070870	24.768	323	185	11	12	301	21	318	2.45e-14	74.7
MS.gene78850.t1	MTR_6g023665	25.697	323	179	12	12	301	15	309	3.08e-14	74.7
MS.gene78850.t1	MTR_2g098430	25.309	324	200	12	8	302	4	314	3.50e-14	74.3
MS.gene78850.t1	MTR_6g033660	22.535	355	181	11	122	395	118	459	4.32e-14	73.9
MS.gene78850.t1	MTR_6g005600	27.893	337	167	16	7	302	3	304	7.86e-14	73.2
MS.gene78850.t1	MTR_8g009050	27.053	207	117	6	118	301	108	303	1.08e-13	72.8
MS.gene78850.t1	MTR_8g077590	28.241	216	113	8	113	301	106	306	1.25e-13	72.8
MS.gene78850.t1	MTR_8g071070	25.613	367	207	13	4	326	1	345	1.35e-13	72.4
MS.gene78850.t1	MTR_8g009055	25.077	323	186	13	10	301	6	303	1.43e-13	72.4
MS.gene78850.t1	MTR_8g012745	25.703	249	137	6	78	301	81	306	2.01e-13	72.0
MS.gene78850.t1	MTR_6g488280	25.077	323	181	14	12	301	8	302	3.37e-13	71.2
MS.gene78850.t1	MTR_0428s0010	25.077	323	181	14	12	301	8	302	3.37e-13	71.2
MS.gene78850.t1	MTR_4g128690	21.720	465	262	13	10	399	15	452	1.38e-12	69.3
MS.gene78850.t1	MTR_8g006730	39.423	104	50	3	199	301	213	304	1.38e-12	69.3
MS.gene78850.t1	MTR_8g006230	30.097	206	109	6	119	301	52	245	1.80e-12	67.8
MS.gene78850.t1	MTR_5g070090	22.059	476	268	17	6	399	7	461	2.04e-12	68.9
MS.gene78850.t1	MTR_6g035185	23.197	319	193	12	13	299	14	312	2.19e-12	68.9
MS.gene78850.t1	MTR_0078s0060	23.176	466	233	17	10	378	6	443	2.21e-12	68.9
MS.gene78850.t1	MTR_8g006270	26.748	329	174	13	8	301	4	300	2.25e-12	68.9
MS.gene78850.t1	MTR_5g070040	25.228	329	202	10	1	301	2	314	2.61e-12	68.6
MS.gene78850.t1	MTR_5g090690	25.869	259	168	8	83	339	36	272	2.91e-12	68.2
MS.gene78850.t1	MTR_0078s0010	24.615	325	186	12	10	301	6	304	3.11e-12	68.2
MS.gene78850.t1	MTR_7g106850	72.973	37	9	1	15	50	144	180	3.72e-12	65.1
MS.gene78850.t1	MTR_5g090610	23.734	316	194	11	8	301	3	293	3.76e-12	68.2
MS.gene78850.t1	MTR_6g035265	26.623	308	187	14	13	299	14	303	3.91e-12	68.2
MS.gene78850.t1	MTR_2g008226	26.860	242	113	9	190	377	217	448	6.86e-12	67.4
MS.gene78850.t1	MTR_5g090600	24.545	330	184	13	8	301	3	303	1.32e-11	66.2
MS.gene78850.t1	MTR_7g470610	27.419	186	115	4	127	301	2	178	1.58e-11	65.1
MS.gene78850.t1	MTR_7g070583	27.419	186	115	4	127	301	2	178	1.58e-11	65.1
MS.gene78850.t1	MTR_8g008990	25.387	323	185	12	10	301	6	303	3.65e-11	65.1
MS.gene78850.t1	MTR_1g107340	24.898	245	144	8	12	226	10	244	4.30e-11	63.5
MS.gene78850.t1	MTR_8g009073	38.318	107	52	3	198	301	79	174	5.45e-11	63.9
MS.gene78850.t1	MTR_5g098930	23.006	326	191	11	8	301	3	300	8.19e-11	63.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene78850.t1	AT1G22340	44.748	476	180	6	8	402	11	484	6.54e-146	423
MS.gene78850.t1	AT1G22400	43.958	480	186	6	6	404	9	486	1.53e-139	407
MS.gene78850.t1	AT1G22380	43.067	476	189	5	8	403	11	484	2.29e-136	399
MS.gene78850.t1	AT1G22360	43.064	483	193	5	1	403	1	481	5.97e-136	398
MS.gene78850.t1	AT1G22370	44.885	479	177	6	5	403	8	479	6.97e-135	395
MS.gene78850.t1	AT1G22360	41.822	483	187	6	1	403	1	469	1.19e-127	376
MS.gene78850.t1	AT1G78270	40.671	477	199	6	5	400	8	481	1.57e-122	364
MS.gene78850.t1	AT1G22370	42.205	263	103	3	190	403	47	309	1.63e-56	188
MS.gene78850.t1	AT5G59590	29.565	460	224	12	12	396	12	446	1.54e-51	179
MS.gene78850.t1	AT5G59580	28.908	467	229	13	6	396	5	444	2.34e-48	171
MS.gene78850.t1	AT3G46670	28.540	459	230	12	12	396	11	445	1.40e-47	169
MS.gene78850.t1	AT3G46690	29.221	462	234	14	8	397	7	447	3.04e-47	167
MS.gene78850.t1	AT3G46650	27.064	436	239	12	7	386	7	419	1.42e-45	163
MS.gene78850.t1	AT3G46700	27.371	464	239	14	8	399	7	444	4.58e-45	162
MS.gene78850.t1	AT3G46660	28.755	466	222	18	12	396	16	452	1.50e-43	158
MS.gene78850.t1	AT3G11340	25.216	464	253	11	7	400	6	445	3.48e-42	154
MS.gene78850.t1	AT3G46720	28.913	460	227	15	8	396	7	437	1.10e-41	152
MS.gene78850.t1	AT5G05860	27.097	465	242	13	10	401	9	449	9.04e-41	150
MS.gene78850.t1	AT5G38010	26.522	460	244	14	12	397	12	451	1.14e-40	150
MS.gene78850.t1	AT3G46680	27.371	464	238	14	8	396	7	446	1.51e-40	149
MS.gene78850.t1	AT2G36970	26.722	479	248	13	8	399	8	470	5.68e-40	149
MS.gene78850.t1	AT3G02100	27.312	465	243	18	8	396	11	456	6.10e-39	145
MS.gene78850.t1	AT3G21560	25.678	479	257	13	9	402	11	475	1.60e-37	142
MS.gene78850.t1	AT5G05900	25.214	468	236	12	11	396	9	444	2.38e-37	141
MS.gene78850.t1	AT5G38040	25.219	456	239	12	18	397	18	447	2.10e-36	138
MS.gene78850.t1	AT4G15500	25.314	478	249	12	9	400	8	463	2.22e-36	139
MS.gene78850.t1	AT4G15490	25.361	485	249	16	10	403	8	470	2.12e-35	136
MS.gene78850.t1	AT5G05870	24.731	465	257	11	10	399	8	454	3.98e-33	129
MS.gene78850.t1	AT3G55700	25.586	469	242	17	12	400	10	451	4.35e-33	129
MS.gene78850.t1	AT4G15480	22.661	481	260	13	10	399	19	478	4.82e-33	129
MS.gene78850.t1	AT2G28080	26.652	469	248	14	14	402	22	474	5.21e-33	129
MS.gene78850.t1	AT1G05680	25.373	469	247	13	10	400	6	449	5.07e-32	126
MS.gene78850.t1	AT2G26480	25.319	470	241	14	12	402	10	448	1.03e-31	125
MS.gene78850.t1	AT5G05880	24.197	467	245	13	10	396	8	445	3.39e-31	124
MS.gene78850.t1	AT1G05675	25.376	465	248	12	10	396	6	449	6.28e-31	123
MS.gene78850.t1	AT2G31750	24.786	468	261	15	7	400	5	455	3.31e-30	121
MS.gene78850.t1	AT5G05890	25.212	472	238	13	10	396	8	449	4.23e-30	121
MS.gene78850.t1	AT2G31750	24.786	468	261	15	7	400	5	455	4.24e-30	121
MS.gene78850.t1	AT2G43840	29.393	313	184	12	8	301	5	299	1.83e-27	113
MS.gene78850.t1	AT3G55710	25.696	467	248	17	12	400	10	455	2.47e-27	113
MS.gene78850.t1	AT4G34131	23.800	479	273	12	6	398	6	478	8.29e-27	112
MS.gene78850.t1	AT2G43840	29.073	313	185	12	8	301	5	299	1.77e-26	110
MS.gene78850.t1	AT4G01070	29.283	321	177	11	9	301	7	305	1.28e-25	107
MS.gene78850.t1	AT4G01070	30.488	328	164	13	9	301	7	305	1.68e-25	108
MS.gene78850.t1	AT2G15490	24.895	474	269	13	10	399	7	477	2.61e-25	107
MS.gene78850.t1	AT2G15480	25.210	476	265	14	10	399	10	480	2.99e-25	107
MS.gene78850.t1	AT2G23250	24.561	456	242	16	19	399	7	435	3.45e-25	107
MS.gene78850.t1	AT2G31790	25.054	467	253	14	8	396	6	453	3.77e-25	107
MS.gene78850.t1	AT2G36760	28.612	353	202	17	10	326	14	352	4.06e-25	107
MS.gene78850.t1	AT2G36790	27.419	496	235	23	10	400	13	488	4.12e-25	107
MS.gene78850.t1	AT2G36800	28.693	352	204	11	10	326	12	351	4.24e-25	107
MS.gene78850.t1	AT2G36770	26.912	353	208	13	10	326	14	352	1.18e-24	105
MS.gene78850.t1	AT2G15490	24.738	477	269	14	10	399	7	480	4.15e-24	104
MS.gene78850.t1	AT3G53150	26.235	324	201	11	10	303	22	337	4.60e-24	104
MS.gene78850.t1	AT2G15480	24.691	486	265	14	10	399	10	490	5.48e-24	103
MS.gene78850.t1	AT2G43820	29.114	316	185	16	6	301	3	299	1.96e-23	102
MS.gene78850.t1	AT2G36780	28.775	351	204	15	10	326	14	352	6.34e-23	100
MS.gene78850.t1	AT2G30140	23.427	461	259	16	10	399	13	450	2.57e-22	99.0
MS.gene78850.t1	AT4G34135	27.190	331	195	11	6	301	7	326	4.16e-22	96.7
MS.gene78850.t1	AT3G53160	26.912	353	208	13	10	326	8	346	7.48e-22	97.8
MS.gene78850.t1	AT2G23260	24.512	461	264	16	10	401	10	455	8.06e-22	97.4
MS.gene78850.t1	AT4G34135	27.190	331	195	11	6	301	7	326	1.09e-21	97.1
MS.gene78850.t1	AT2G30140	23.377	462	259	16	10	399	13	451	1.28e-21	96.7
MS.gene78850.t1	AT5G37950	26.586	331	192	12	25	328	1	307	3.24e-21	94.4
MS.gene78850.t1	AT2G36750	27.714	350	208	16	10	326	10	347	3.66e-21	95.5
MS.gene78850.t1	AT4G15550	25.758	330	182	11	7	299	10	313	3.67e-21	95.5
MS.gene78850.t1	AT1G24100	22.766	470	265	17	8	399	9	458	9.16e-21	94.4
MS.gene78850.t1	AT5G37950	26.769	325	193	13	25	328	1	301	2.27e-20	92.0
MS.gene78850.t1	AT1G01420	25.820	488	229	19	9	395	7	462	4.37e-20	92.4
MS.gene78850.t1	AT1G01420	25.820	488	229	19	9	395	10	465	6.12e-20	92.0
MS.gene78850.t1	AT1G05560	26.214	309	191	10	9	299	4	293	1.31e-19	90.9
MS.gene78850.t1	AT1G05560	26.214	309	191	10	9	299	54	343	2.09e-19	90.5
MS.gene78850.t1	AT1G05530	23.256	473	265	18	7	400	2	455	2.17e-19	90.1
MS.gene78850.t1	AT1G51210	27.746	346	199	16	5	326	15	333	4.57e-19	89.0
MS.gene78850.t1	AT5G03490	24.380	484	239	18	6	398	14	461	7.35e-19	88.6
MS.gene78850.t1	AT5G66690	22.754	501	240	19	7	398	4	466	3.23e-18	86.7
MS.gene78850.t1	AT1G30530	23.210	461	260	13	11	400	14	451	4.05e-18	86.3
MS.gene78850.t1	AT5G26310	22.672	494	249	21	7	398	4	466	4.32e-18	86.3
MS.gene78850.t1	AT3G21800	27.019	322	184	11	12	301	7	309	4.59e-17	83.2
MS.gene78850.t1	AT1G01390	27.762	353	185	15	5	322	21	338	1.53e-16	81.6
MS.gene78850.t1	AT1G01390	27.762	353	185	15	5	322	4	321	1.57e-16	81.6
MS.gene78850.t1	AT4G34138	23.780	492	259	19	7	401	8	480	2.25e-16	81.3
MS.gene78850.t1	AT1G73880	23.878	490	257	20	2	400	3	467	2.21e-15	78.2
MS.gene78850.t1	AT3G21790	26.606	327	183	11	12	301	6	312	2.59e-15	77.8
MS.gene78850.t1	AT3G21780	26.235	324	187	10	8	301	2	303	1.36e-13	72.8
MS.gene78850.t1	AT3G50740	24.149	323	198	11	7	302	4	306	1.70e-13	72.4
MS.gene78850.t1	AT3G16520	25.941	239	136	10	119	328	113	339	5.31e-13	70.9
MS.gene78850.t1	AT3G16520	25.941	239	136	10	119	328	113	339	5.48e-13	70.9
MS.gene78850.t1	AT3G16520	25.941	239	136	10	119	328	113	339	6.81e-13	70.5
MS.gene78850.t1	AT3G21760	26.393	341	202	14	12	318	6	331	2.08e-11	65.9
MS.gene78850.t1	AT4G15280	25.767	326	183	13	12	301	6	308	3.18e-11	65.5
MS.gene78850.t1	AT4G15280	25.767	326	183	13	12	301	38	340	3.33e-11	65.5

Find 80 sgRNAs with CRISPR-Local

Find 119 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTATCTAACAAATGGATATT+TGG	0.229612	3.1:+3650478	MS.gene78850:CDS
TAAGTTGACAATAGGGTTTA+AGG	0.241067	3.1:-3649837	None:intergenic
GAACTTCGACAAAGTAATTA+AGG	0.318326	3.1:+3651360	MS.gene78850:CDS
TCTAGTGATGTTAGACCATC+TGG	0.321083	3.1:-3649754	None:intergenic
TCTAGTAATAAGTTGACAAT+AGG	0.324799	3.1:-3649845	None:intergenic
GCAAAACTACTTCACCTTAG+AGG	0.327381	3.1:+3649625	MS.gene78850:CDS
ATTGATGAATTTGTGGAGTT+TGG	0.329616	3.1:-3650745	None:intergenic
ACAAAAGTAGATTGGATTCC+AGG	0.332750	3.1:+3650503	MS.gene78850:CDS
AACTCCACAAATTCATCAAT+TGG	0.344444	3.1:+3650748	MS.gene78850:CDS
AATAAAGAACATGCACTTGA+TGG	0.347416	3.1:-3649979	None:intergenic
GTGGACACCAACTTGCTATT+AGG	0.356812	3.1:-3651021	None:intergenic
ATTTGTAATGAATGGAAGAT+TGG	0.360252	3.1:+3651184	MS.gene78850:CDS
ATATGGCCTTGAGCTGGATA+TGG	0.361172	3.1:-3649583	None:intergenic
ATTCTTTAGATTCCAACCTT+TGG	0.362742	3.1:+3650771	MS.gene78850:CDS
TCAGGAATTTGCTTGGGGTT+TGG	0.363964	3.1:+3650895	MS.gene78850:CDS
ATTTGGAAACAAAAGTAGAT+TGG	0.372644	3.1:+3650495	MS.gene78850:CDS
GCTTAAACAATGGATTGATA+TGG	0.375758	3.1:-3649600	None:intergenic
AGAGGTCCAAATGCCTTAGA+TGG	0.381340	3.1:+3649703	MS.gene78850:CDS
TGCCTTCTTCTTCAATTCCA+TGG	0.384688	3.1:-3651302	None:intergenic
AGGTTATGTAAAAGCCTCTA+AGG	0.385615	3.1:-3649639	None:intergenic
TCTGTTGTTTATGTGAATTT+CGG	0.393015	3.1:+3650842	MS.gene78850:CDS
GCAACTTCAGGAATTTGCTT+GGG	0.396180	3.1:+3650889	MS.gene78850:CDS
TCAGAAACTAAGCAAGTAAC+TGG	0.402772	3.1:-3649892	None:intergenic
AAAATCAGTGAAACCATCTA+AGG	0.408184	3.1:-3649716	None:intergenic
GTGAAACCATCTAAGGCATT+TGG	0.409795	3.1:-3649709	None:intergenic
GTAGATTTATTTGTAATGAA+TGG	0.414788	3.1:+3651176	MS.gene78850:CDS
TATGACTCCAGAGCAACTTC+AGG	0.417251	3.1:+3650877	MS.gene78850:CDS
GCGAATGAAATTTCAGATAG+AGG	0.428205	3.1:+3650998	MS.gene78850:CDS
CTAGTAATAAGTTGACAATA+GGG	0.428652	3.1:-3649844	None:intergenic
GAATCCAATTGATGAATTTG+TGG	0.435101	3.1:-3650752	None:intergenic
GATATCTTCTTTCCAAAGGT+TGG	0.437371	3.1:-3650783	None:intergenic
GGTTCAATAATGAAGGTAAA+GGG	0.439407	3.1:-3650724	None:intergenic
GGAGTTTGGTTCAATAATGA+AGG	0.439737	3.1:-3650731	None:intergenic
GCAAATTCCTGAAGTTGCTC+TGG	0.444834	3.1:-3650884	None:intergenic
TTTCGTTCCTTTGTAGAAAG+AGG	0.447329	3.1:+3650015	MS.gene78850:CDS
GATGAGAGTTATCTAACAAA+TGG	0.452799	3.1:+3650470	MS.gene78850:intron
ATTCCTTATGTTTACCCGAT+TGG	0.455975	3.1:+3650701	MS.gene78850:CDS
AATGAAGGTAAAGGGCCAAT+CGG	0.457592	3.1:-3650716	None:intergenic
AGCAACTTCAGGAATTTGCT+TGG	0.464349	3.1:+3650888	MS.gene78850:CDS
ACTAGGCCTGATCTTGTCAT+TGG	0.485644	3.1:+3650947	MS.gene78850:CDS
TGGTTCAATAATGAAGGTAA+AGG	0.485974	3.1:-3650725	None:intergenic
GACTTAGCAGTACCTTTGAA+TGG	0.487769	3.1:-3650045	None:intergenic
GAACTAATAGCCGGAGATGA+AGG	0.488655	3.1:+3651259	MS.gene78850:CDS
GGGCCAATCGGGTAAACATA+AGG	0.490912	3.1:-3650704	None:intergenic
AGGCCTGATCTTGTCATTGG+TGG	0.495086	3.1:+3650950	MS.gene78850:CDS
GAGCCACCAATGACAAGATC+AGG	0.496376	3.1:-3650953	None:intergenic
ATGAAGGTAAAGGGCCAATC+GGG	0.500209	3.1:-3650715	None:intergenic
GATGGTCTAACATCACTAGA+AGG	0.505360	3.1:+3649757	MS.gene78850:CDS
TAATGAATGGAAGATTGGTA+TGG	0.522438	3.1:+3651189	MS.gene78850:CDS
TGCCATGGAATTGAAGAAGA+AGG	0.528484	3.1:+3651300	MS.gene78850:CDS
TTCACATAAACAACAGATCT+CGG	0.534231	3.1:-3650836	None:intergenic
TCTTCAATGGCTTGAATCGA+AGG	0.535713	3.1:+3650811	MS.gene78850:CDS
CAACTTCAGGAATTTGCTTG+GGG	0.542313	3.1:+3650890	MS.gene78850:CDS
CTTATAGATTGACAAAGAGA+AGG	0.549311	3.1:-3649805	None:intergenic
AAGATATCGAGTGTCTTCAA+TGG	0.554080	3.1:+3650798	MS.gene78850:CDS
GCAAGTAACTGGTGGAACAT+TGG	0.554157	3.1:-3649881	None:intergenic
AAATGTGAAGAGAGAGGAGG+TGG	0.557732	3.1:+3651222	MS.gene78850:CDS
GGATTGATATGGCCTTGAGC+TGG	0.560144	3.1:-3649589	None:intergenic
ACTCGATATCTTCTTTCCAA+AGG	0.563526	3.1:-3650787	None:intergenic
GAAAATGAGGCAAAATGCCA+TGG	0.567730	3.1:+3651285	MS.gene78850:CDS
AGCTTTGAAACCATCCCAGA+TGG	0.571170	3.1:+3649739	MS.gene78850:CDS
CTGATCAATGAACTAATAGC+CGG	0.574006	3.1:+3651250	MS.gene78850:CDS
GTAAACATAAGGAATTATAG+AGG	0.579325	3.1:-3650693	None:intergenic
TTGATTCCATATCCAGCTCA+AGG	0.594605	3.1:+3649577	MS.gene78850:CDS
GAGATGAAGGAAAGAAAATG+AGG	0.604942	3.1:+3651272	MS.gene78850:CDS
GGAATTGAAGAAGAAGGCAG+AGG	0.606965	3.1:+3651306	MS.gene78850:CDS
CGATACAAATGTGAAGAGAG+AGG	0.608572	3.1:+3651216	MS.gene78850:CDS
CTAGTGATGTTAGACCATCT+GGG	0.609090	3.1:-3649753	None:intergenic
AAACGCTTGCTCAAATCAAG+AGG	0.611360	3.1:+3649685	MS.gene78850:CDS
AGAGGCATCACACCATTCAA+AGG	0.614365	3.1:+3650033	MS.gene78850:CDS
TATGGAATCAACACAGCATG+TGG	0.616639	3.1:-3649565	None:intergenic
TGATGTTAGACCATCTGGGA+TGG	0.618549	3.1:-3649749	None:intergenic
GAAACTAAGCAAGTAACTGG+TGG	0.626441	3.1:-3649889	None:intergenic
GCAGAGGAGAACACTAGACC+AGG	0.637069	3.1:+3651322	MS.gene78850:CDS
TGTGATGCCTCTTTCTACAA+AGG	0.638539	3.1:-3650022	None:intergenic
CTAACATCACTAGAAGGTGA+TGG	0.647205	3.1:+3649763	MS.gene78850:CDS
TTCATGTATGAACAACCACC+TGG	0.668591	3.1:-3651340	None:intergenic
ATTGTATTCAGTGTTGACAA+AGG	0.675767	3.1:-3649659	None:intergenic
TACAAATGTGAAGAGAGAGG+AGG	0.706368	3.1:+3651219	MS.gene78850:CDS
GAGGAGAACACTAGACCAGG+TGG	0.717430	3.1:+3651325	MS.gene78850:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATAGTTTTTGAAAAATAAAA+TGG	-	chr3.1:3650184-3650203	None:intergenic	10.0%
!!!	ATTTTTCAAAAACTATTGAA+GGG	+	chr3.1:3650188-3650207	MS.gene78850:intron	15.0%
!!!	TAATGATAGATAATTTTACA+AGG	+	chr3.1:3650224-3650243	MS.gene78850:intron	15.0%
!!!	TATTTTTCAAAAACTATTGA+AGG	+	chr3.1:3650187-3650206	MS.gene78850:intron	15.0%
!!	AATTCTAACATAATATCGTT+TGG	-	chr3.1:3650581-3650600	None:intergenic	20.0%
!!	GTAGATTTATTTGTAATGAA+TGG	+	chr3.1:3651176-3651195	MS.gene78850:CDS	20.0%
!!	TACAAAAGTTAATAGTTTGA+AGG	-	chr3.1:3650437-3650456	None:intergenic	20.0%
!!	TTATCTAACAAATGGATATT+TGG	+	chr3.1:3650478-3650497	MS.gene78850:CDS	20.0%
!!!	TTTTTCAAAAACTATTGAAG+GGG	+	chr3.1:3650189-3650208	MS.gene78850:intron	20.0%
!	ACTCGATTAACAAATCTATA+AGG	-	chr3.1:3650270-3650289	None:intergenic	25.0%
!	ATGGAAAAAAGAGAACATTA+GGG	-	chr3.1:3649963-3649982	None:intergenic	25.0%
!	ATTTGGAAACAAAAGTAGAT+TGG	+	chr3.1:3650495-3650514	MS.gene78850:CDS	25.0%
!	ATTTGTAATGAATGGAAGAT+TGG	+	chr3.1:3651184-3651203	MS.gene78850:CDS	25.0%
!	GTAAACATAAGGAATTATAG+AGG	-	chr3.1:3650696-3650715	None:intergenic	25.0%
!	TATATGTCAAGAGTTAATCT+TGG	-	chr3.1:3650149-3650168	None:intergenic	25.0%
!!	CTAGTAATAAGTTGACAATA+GGG	-	chr3.1:3649847-3649866	None:intergenic	25.0%
!!	TCTAGTAATAAGTTGACAAT+AGG	-	chr3.1:3649848-3649867	None:intergenic	25.0%
!!	TCTGTTGTTTATGTGAATTT+CGG	+	chr3.1:3650842-3650861	MS.gene78850:CDS	25.0%
!!	TTCCAGGTTTGAAAAATTTT+CGG	+	chr3.1:3650519-3650538	MS.gene78850:intron	25.0%
!!	TTTGAAAAATTTTCGGTTGA+AGG	+	chr3.1:3650526-3650545	MS.gene78850:intron	25.0%
!!	TTTTCAAAAACTATTGAAGG+GGG	+	chr3.1:3650190-3650209	MS.gene78850:intron	25.0%
	AAAAATGGCCAACATAACAT+TGG	-	chr3.1:3651136-3651155	None:intergenic	30.0%
	AAAATCAGTGAAACCATCTA+AGG	-	chr3.1:3649719-3649738	None:intergenic	30.0%
	AACTCCACAAATTCATCAAT+TGG	+	chr3.1:3650748-3650767	MS.gene78850:CDS	30.0%
	AATAAAGAACATGCACTTGA+TGG	-	chr3.1:3649982-3650001	None:intergenic	30.0%
	ATTCTTTAGATTCCAACCTT+TGG	+	chr3.1:3650771-3650790	MS.gene78850:CDS	30.0%
	ATTGATGAATTTGTGGAGTT+TGG	-	chr3.1:3650748-3650767	None:intergenic	30.0%
	CAAATAAATCTACAGTCTGT+TGG	-	chr3.1:3651169-3651188	None:intergenic	30.0%
	CTTATAGATTGACAAAGAGA+AGG	-	chr3.1:3649808-3649827	None:intergenic	30.0%
	GAACTTCGACAAAGTAATTA+AGG	+	chr3.1:3651360-3651379	MS.gene78850:CDS	30.0%
	GAATCCAATTGATGAATTTG+TGG	-	chr3.1:3650755-3650774	None:intergenic	30.0%
	GATGAGAGTTATCTAACAAA+TGG	+	chr3.1:3650470-3650489	MS.gene78850:intron	30.0%
	GATGGAAAAAAGAGAACATT+AGG	-	chr3.1:3649964-3649983	None:intergenic	30.0%
	GGTTCAATAATGAAGGTAAA+GGG	-	chr3.1:3650727-3650746	None:intergenic	30.0%
	TAATGAATGGAAGATTGGTA+TGG	+	chr3.1:3651189-3651208	MS.gene78850:CDS	30.0%
	TGGTTCAATAATGAAGGTAA+AGG	-	chr3.1:3650728-3650747	None:intergenic	30.0%
	TTCACATAAACAACAGATCT+CGG	-	chr3.1:3650839-3650858	None:intergenic	30.0%
	TTCATATACACACACATATG+AGG	-	chr3.1:3650414-3650433	None:intergenic	30.0%
	TTTCAAAAACTATTGAAGGG+GGG	+	chr3.1:3650191-3650210	MS.gene78850:intron	30.0%
!	TAAGTTGACAATAGGGTTTA+AGG	-	chr3.1:3649840-3649859	None:intergenic	30.0%
!!	AACCGAAAATTTTTCAAACC+TGG	-	chr3.1:3650524-3650543	None:intergenic	30.0%
!!	AGTTTTGCTAGCTTAAACAA+TGG	-	chr3.1:3649613-3649632	None:intergenic	30.0%
!!	ATTGTATTCAGTGTTGACAA+AGG	-	chr3.1:3649662-3649681	None:intergenic	30.0%
!!	GCTTAAACAATGGATTGATA+TGG	-	chr3.1:3649603-3649622	None:intergenic	30.0%
!!!	AGAGTTTTTAATTTGACGGT+TGG	-	chr3.1:3650303-3650322	None:intergenic	30.0%
!!!	AGCGAGAGTTTTTAATTTGA+CGG	-	chr3.1:3650307-3650326	None:intergenic	30.0%
	AAGATATCGAGTGTCTTCAA+TGG	+	chr3.1:3650798-3650817	MS.gene78850:CDS	35.0%
	ACAAAAGTAGATTGGATTCC+AGG	+	chr3.1:3650503-3650522	MS.gene78850:CDS	35.0%
	ACTCGATATCTTCTTTCCAA+AGG	-	chr3.1:3650790-3650809	None:intergenic	35.0%
	AGGTTATGTAAAAGCCTCTA+AGG	-	chr3.1:3649642-3649661	None:intergenic	35.0%
	ATTCCTTATGTTTACCCGAT+TGG	+	chr3.1:3650701-3650720	MS.gene78850:CDS	35.0%
	CTGATCAATGAACTAATAGC+CGG	+	chr3.1:3651250-3651269	MS.gene78850:CDS	35.0%
	GAGATGAAGGAAAGAAAATG+AGG	+	chr3.1:3651272-3651291	MS.gene78850:CDS	35.0%
	GATATCTTCTTTCCAAAGGT+TGG	-	chr3.1:3650786-3650805	None:intergenic	35.0%
	GCGAATGAAATTTCAGATAG+AGG	+	chr3.1:3650998-3651017	MS.gene78850:CDS	35.0%
	TCAGAAACTAAGCAAGTAAC+TGG	-	chr3.1:3649895-3649914	None:intergenic	35.0%
	TTTCGTTCCTTTGTAGAAAG+AGG	+	chr3.1:3650015-3650034	MS.gene78850:CDS	35.0%
!	CATTTTCTTTCCTTCATCTC+CGG	-	chr3.1:3651272-3651291	None:intergenic	35.0%
!	GGAGTTTGGTTCAATAATGA+AGG	-	chr3.1:3650734-3650753	None:intergenic	35.0%
!!!	ATAGTAAGACGCCATTTTTG+TGG	+	chr3.1:3650921-3650940	MS.gene78850:CDS	35.0%
	AAACGCTTGCTCAAATCAAG+AGG	+	chr3.1:3649685-3649704	MS.gene78850:CDS	40.0%
	AATGAAGGTAAAGGGCCAAT+CGG	-	chr3.1:3650719-3650738	None:intergenic	40.0%
	ATAGAGGCCTAATAGCAAGT+TGG	+	chr3.1:3651014-3651033	MS.gene78850:intron	40.0%
	CGATACAAATGTGAAGAGAG+AGG	+	chr3.1:3651216-3651235	MS.gene78850:CDS	40.0%
	CTAACATCACTAGAAGGTGA+TGG	+	chr3.1:3649763-3649782	MS.gene78850:CDS	40.0%
	CTAGTGATGTTAGACCATCT+GGG	-	chr3.1:3649756-3649775	None:intergenic	40.0%
	GAAAATGAGGCAAAATGCCA+TGG	+	chr3.1:3651285-3651304	MS.gene78850:CDS	40.0%
	GAAACTAAGCAAGTAACTGG+TGG	-	chr3.1:3649892-3649911	None:intergenic	40.0%
	GACTTAGCAGTACCTTTGAA+TGG	-	chr3.1:3650048-3650067	None:intergenic	40.0%
	GATGGTCTAACATCACTAGA+AGG	+	chr3.1:3649757-3649776	MS.gene78850:CDS	40.0%
	GCAAAACTACTTCACCTTAG+AGG	+	chr3.1:3649625-3649644	MS.gene78850:CDS	40.0%
	GTGTTGAACCATCCTTCAAT+CGG	+	chr3.1:3651052-3651071	MS.gene78850:intron	40.0%
	TACAAATGTGAAGAGAGAGG+AGG	+	chr3.1:3651219-3651238	MS.gene78850:CDS	40.0%
	TATGGAATCAACACAGCATG+TGG	-	chr3.1:3649568-3649587	None:intergenic	40.0%
	TCTAGTGATGTTAGACCATC+TGG	-	chr3.1:3649757-3649776	None:intergenic	40.0%
	TCTTCAATGGCTTGAATCGA+AGG	+	chr3.1:3650811-3650830	MS.gene78850:CDS	40.0%
	TGCCATGGAATTGAAGAAGA+AGG	+	chr3.1:3651300-3651319	MS.gene78850:CDS	40.0%
	TGCCTTCTTCTTCAATTCCA+TGG	-	chr3.1:3651305-3651324	None:intergenic	40.0%
	TGGTTCAACACTTTCTCTTG+TGG	-	chr3.1:3651043-3651062	None:intergenic	40.0%
	TGTGATGCCTCTTTCTACAA+AGG	-	chr3.1:3650025-3650044	None:intergenic	40.0%
	TTCATGTATGAACAACCACC+TGG	-	chr3.1:3651343-3651362	None:intergenic	40.0%
	TTGATTCCATATCCAGCTCA+AGG	+	chr3.1:3649577-3649596	MS.gene78850:CDS	40.0%
!	AGCAACTTCAGGAATTTGCT+TGG	+	chr3.1:3650888-3650907	MS.gene78850:CDS	40.0%
!	CAACTTCAGGAATTTGCTTG+GGG	+	chr3.1:3650890-3650909	MS.gene78850:CDS	40.0%
!	GCAACTTCAGGAATTTGCTT+GGG	+	chr3.1:3650889-3650908	MS.gene78850:CDS	40.0%
!	GTGAAACCATCTAAGGCATT+TGG	-	chr3.1:3649712-3649731	None:intergenic	40.0%
	AAATGTGAAGAGAGAGGAGG+TGG	+	chr3.1:3651222-3651241	MS.gene78850:CDS	45.0%
	ACTAGGCCTGATCTTGTCAT+TGG	+	chr3.1:3650947-3650966	MS.gene78850:CDS	45.0%
	AGAGGTCCAAATGCCTTAGA+TGG	+	chr3.1:3649703-3649722	MS.gene78850:CDS	45.0%
	ATGAAGGTAAAGGGCCAATC+GGG	-	chr3.1:3650718-3650737	None:intergenic	45.0%
	GAACTAATAGCCGGAGATGA+AGG	+	chr3.1:3651259-3651278	MS.gene78850:CDS	45.0%
	GATTCTTGACTCATTGCGGA+TGG	+	chr3.1:3651077-3651096	MS.gene78850:intron	45.0%
	GCAAATTCCTGAAGTTGCTC+TGG	-	chr3.1:3650887-3650906	None:intergenic	45.0%
	GCAAGTAACTGGTGGAACAT+TGG	-	chr3.1:3649884-3649903	None:intergenic	45.0%
	GGAATTGAAGAAGAAGGCAG+AGG	+	chr3.1:3651306-3651325	MS.gene78850:CDS	45.0%
	GGCCTAGTGATCCACAAAAA+TGG	-	chr3.1:3650935-3650954	None:intergenic	45.0%
	GTTGGCTGATCGGCAAAAAA+TGG	-	chr3.1:3651151-3651170	None:intergenic	45.0%
	TATGACTCCAGAGCAACTTC+AGG	+	chr3.1:3650877-3650896	MS.gene78850:CDS	45.0%
	TCCAGCACATATGCTTTCAG+TGG	-	chr3.1:3651110-3651129	None:intergenic	45.0%
	TGATGTTAGACCATCTGGGA+TGG	-	chr3.1:3649752-3649771	None:intergenic	45.0%
	TTGAACCATCCTTCAATCGG+TGG	+	chr3.1:3651055-3651074	MS.gene78850:intron	45.0%
!	ACCACTGAAAGCATATGTGC+TGG	+	chr3.1:3651106-3651125	MS.gene78850:intron	45.0%
!	AGAATCCACCGATTGAAGGA+TGG	-	chr3.1:3651063-3651082	None:intergenic	45.0%
!	ATATGGCCTTGAGCTGGATA+TGG	-	chr3.1:3649586-3649605	None:intergenic	45.0%
!	CTGGAGTGCCAATGTTATGT+TGG	+	chr3.1:3651125-3651144	MS.gene78850:intron	45.0%
!	GGTGGATTCTTGACTCATTG+CGG	+	chr3.1:3651073-3651092	MS.gene78850:intron	45.0%
!	GTCAAGAATCCACCGATTGA+AGG	-	chr3.1:3651067-3651086	None:intergenic	45.0%
!	TCAGGAATTTGCTTGGGGTT+TGG	+	chr3.1:3650895-3650914	MS.gene78850:CDS	45.0%
!	TCTACAGTCTGTTGGCTGAT+CGG	-	chr3.1:3651161-3651180	None:intergenic	45.0%
!!	AGAGGCATCACACCATTCAA+AGG	+	chr3.1:3650033-3650052	MS.gene78850:CDS	45.0%
!!	AGCTTTGAAACCATCCCAGA+TGG	+	chr3.1:3649739-3649758	MS.gene78850:CDS	45.0%
!!	GTGGACACCAACTTGCTATT+AGG	-	chr3.1:3651024-3651043	None:intergenic	45.0%
!!!	CGCCATTTTTGTGGATCACT+AGG	+	chr3.1:3650930-3650949	MS.gene78850:CDS	45.0%
	AGGCCTGATCTTGTCATTGG+TGG	+	chr3.1:3650950-3650969	MS.gene78850:CDS	50.0%
	GAGCCACCAATGACAAGATC+AGG	-	chr3.1:3650956-3650975	None:intergenic	50.0%
	GGGCCAATCGGGTAAACATA+AGG	-	chr3.1:3650707-3650726	None:intergenic	50.0%
!	GGATTGATATGGCCTTGAGC+TGG	-	chr3.1:3649592-3649611	None:intergenic	50.0%
	GAGGAGAACACTAGACCAGG+TGG	+	chr3.1:3651325-3651344	MS.gene78850:CDS	55.0%
	GCAGAGGAGAACACTAGACC+AGG	+	chr3.1:3651322-3651341	MS.gene78850:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.1	gene	3649541	3651405	3649541	ID=MS.gene78850
chr3.1	mRNA	3649541	3651405	3649541	ID=MS.gene78850.t1;Parent=MS.gene78850
chr3.1	exon	3649541	3650054	3649541	ID=MS.gene78850.t1.exon1;Parent=MS.gene78850.t1
chr3.1	CDS	3649541	3650054	3649541	ID=cds.MS.gene78850.t1;Parent=MS.gene78850.t1
chr3.1	exon	3650471	3650524	3650471	ID=MS.gene78850.t1.exon2;Parent=MS.gene78850.t1
chr3.1	CDS	3650471	3650524	3650471	ID=cds.MS.gene78850.t1;Parent=MS.gene78850.t1
chr3.1	exon	3650618	3651031	3650618	ID=MS.gene78850.t1.exon3;Parent=MS.gene78850.t1
chr3.1	CDS	3650618	3651031	3650618	ID=cds.MS.gene78850.t1;Parent=MS.gene78850.t1
chr3.1	exon	3651173	3651405	3651173	ID=MS.gene78850.t1.exon4;Parent=MS.gene78850.t1
chr3.1	CDS	3651173	3651405	3651173	ID=cds.MS.gene78850.t1;Parent=MS.gene78850.t1

Gene Sequence

>MS.gene78850

ATGGTAAACTTTGCAAACACAAAACCACATGCTGTGTTGATTCCATATCCAGCTCAAGGCCATATCAATCCATTGTTTAAGCTAGCAAAACTACTTCACCTTAGAGGCTTTTACATAACCTTTGTCAACACTGAATACAATCACAAACGCTTGCTCAAATCAAGAGGTCCAAATGCCTTAGATGGTTTCACTGATTTTAGCTTTGAAACCATCCCAGATGGTCTAACATCACTAGAAGGTGATGGTGATGTTAGTCAACATGTACCTTCTCTTTGTCAATCTATAAGAAAGAATTTCCTTAAACCCTATTGTCAACTTATTACTAGACTTAATCACTCTGCCAATGTTCCACCAGTTACTTGCTTAGTTTCTGATTGTTTGATGAGCTTTACTATACAAGCTGCTGAAGAATTTGCACTCCCTAATGTTCTCTTTTTTCCATCAAGTGCATGTTCTTTATTGAATGTTATGCACTTTCGTTCCTTTGTAGAAAGAGGCATCACACCATTCAAAGGTACTGCTAAGTCTATTTTCTTGATAGATGATGATAGTATGTGTACTCTATATATATAGTGTGTATGCGCGCGCGTGAAATTCAACTTACTCCAAGATTAACTCTTGACATATATATATAGTTATTCCATTTTATTTTTCAAAAACTATTGAAGGGGGGAAATTATTTCTAATGATAGATAATTTTACAAGGTTAAACTCTTACTACTGACACCTTATAGATTTGTTAATCGAGTTAATAACAAGCCAACCGTCAAATTAAAAACTCTCGCTGAGAAGATGACATGCACAAAATTTTATAAAACTTCAAAACTAAAATTCATATTTCAACAAATAACTCTCATTGAATGTATAATACCTCATATGTGTGTGTATATGAACCTTCAAACTATTAACTTTTGTACTTATGATATGCAGATGAGAGTTATCTAACAAATGGATATTTGGAAACAAAAGTAGATTGGATTCCAGGTTTGAAAAATTTTCGGTTGAAGGATATTGTTGACTTTATCAGAACAACAAATCCAAACGATATTATGTTAGAATTCTTTATTGAAATTGCAGATAGAGTTAATAGAGACTCTATTATTCTTTTGAATACTTTCAATGAACTTGAGAGTGATGTAATAAATGCTCTCTCCTCTATAATTCCTTATGTTTACCCGATTGGCCCTTTACCTTCATTATTGAACCAAACTCCACAAATTCATCAATTGGATTCTTTAGATTCCAACCTTTGGAAAGAAGATATCGAGTGTCTTCAATGGCTTGAATCGAAGGAACCGAGATCTGTTGTTTATGTGAATTTCGGAAGCATTACAGTTATGACTCCAGAGCAACTTCAGGAATTTGCTTGGGGTTTGGCAAATAGTAAGACGCCATTTTTGTGGATCACTAGGCCTGATCTTGTCATTGGTGGCTCAGTGATTTTGTCATCTGAGTTTGCGAATGAAATTTCAGATAGAGGCCTAATAGCAAGTTGGTGTCCACAAGAGAAAGTGTTGAACCATCCTTCAATCGGTGGATTCTTGACTCATTGCGGATGGAACTCAACCACTGAAAGCATATGTGCTGGAGTGCCAATGTTATGTTGGCCATTTTTTGCCGATCAGCCAACAGACTGTAGATTTATTTGTAATGAATGGAAGATTGGTATGGAAATCGATACAAATGTGAAGAGAGAGGAGGTGGCAAAGCTGATCAATGAACTAATAGCCGGAGATGAAGGAAAGAAAATGAGGCAAAATGCCATGGAATTGAAGAAGAAGGCAGAGGAGAACACTAGACCAGGTGGTTGTTCATACATGAACTTCGACAAAGTAATTAAGGAAGTGTTGCTTAAACAAAATTAG

Protein sequence

>MS.gene78850.t1

MVNFANTKPHAVLIPYPAQGHINPLFKLAKLLHLRGFYITFVNTEYNHKRLLKSRGPNALDGFTDFSFETIPDGLTSLEGDGDVSQHVPSLCQSIRKNFLKPYCQLITRLNHSANVPPVTCLVSDCLMSFTIQAAEEFALPNVLFFPSSACSLLNVMHFRSFVERGITPFKDESYLTNGYLETKVDWIPDRVNRDSIILLNTFNELESDVINALSSIIPYVYPIGPLPSLLNQTPQIHQLDSLDSNLWKEDIECLQWLESKEPRSVVYVNFGSITVMTPEQLQEFAWGLANSKTPFLWITRPDLVIGGSVILSSEFANEISDRGLIANCRFICNEWKIGMEIDTNVKREEVAKLINELIAGDEGKKMRQNAMELKKKAEENTRPGGCSYMNFDKVIKEVLLKQN