Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026765.t1 | XP_003595735.1 | 93 | 343 | 24 | 0 | 3 | 345 | 23 | 365 | 1.10E-172 | 615.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026765.t1 | Q9FPS3 | 43.9 | 358 | 175 | 8 | 8 | 345 | 30 | 381 | 1.2e-61 | 238.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026765.t1 | G7IGQ8 | 93.0 | 343 | 24 | 0 | 3 | 345 | 23 | 365 | 8.1e-173 | 615.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene06786 | MS.gene026765 | PPI |
MS.gene58136 | MS.gene026765 | PPI |
MS.gene58134 | MS.gene026765 | PPI |
MS.gene28183 | MS.gene026765 | PPI |
MS.gene030686 | MS.gene026765 | PPI |
MS.gene026765 | MS.gene06541 | PPI |
MS.gene049411 | MS.gene026765 | PPI |
MS.gene28454 | MS.gene026765 | PPI |
MS.gene013441 | MS.gene026765 | PPI |
MS.gene70283 | MS.gene026765 | PPI |
MS.gene70282 | MS.gene026765 | PPI |
MS.gene030685 | MS.gene026765 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026765.t1 | MTR_2g060050 | 93.003 | 343 | 24 | 0 | 3 | 345 | 23 | 365 | 0.0 | 640 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026765.t1 | AT4G30890 | 62.500 | 192 | 69 | 2 | 156 | 345 | 191 | 381 | 9.80e-76 | 243 |
MS.gene026765.t1 | AT4G30890 | 62.500 | 192 | 69 | 2 | 156 | 345 | 191 | 381 | 9.80e-76 | 243 |
MS.gene026765.t1 | AT4G30890 | 62.500 | 192 | 69 | 2 | 156 | 345 | 191 | 381 | 9.80e-76 | 243 |
Find 56 sgRNAs with CRISPR-Local
Find 129 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATTATTCTCAGAAATTTAA+AGG | 0.166354 | 4.1:-85386909 | MS.gene026765:CDS |
TGGAGGACAACTCCAAAATT+TGG | 0.196841 | 4.1:-85385103 | MS.gene026765:CDS |
CTTTAGTTATCACCAAATTT+TGG | 0.210978 | 4.1:+85385091 | None:intergenic |
GTTACACCAATTGACGAAAA+TGG | 0.235400 | 4.1:-85386753 | MS.gene026765:CDS |
TTTATTCCCTCGGAATTAAA+TGG | 0.250861 | 4.1:-85385132 | MS.gene026765:CDS |
GTAACAACAGATTTATTCTT+TGG | 0.252796 | 4.1:+85385168 | None:intergenic |
GGTCTTCCTGAAATGCTATT+TGG | 0.264675 | 4.1:+85386033 | None:intergenic |
CTTTAAATTTCTGAGAATAA+TGG | 0.266832 | 4.1:+85386910 | None:intergenic |
TTTGGTGCTTTCGGTGAATT+TGG | 0.281536 | 4.1:+85386945 | None:intergenic |
AGAACATCTTCAAACATAAC+AGG | 0.295458 | 4.1:+85386078 | None:intergenic |
GATGTGCCAAATAGCATTTC+AGG | 0.297505 | 4.1:-85386039 | MS.gene026765:CDS |
ATAAATTCCCAGAGTTAATA+AGG | 0.309476 | 4.1:+85386556 | None:intergenic |
CCAAGCTCAAATTTGTAAAC+TGG | 0.311830 | 4.1:+85386721 | None:intergenic |
ATTTAACCAAGACTTGAAAA+AGG | 0.314327 | 4.1:-85386628 | MS.gene026765:CDS |
TAATGGCGAGGAGCACTATT+TGG | 0.332957 | 4.1:+85386927 | None:intergenic |
GGACAGTCTTCAAGTCTTAA+TGG | 0.340469 | 4.1:-85385246 | MS.gene026765:CDS |
TTCTTTAACTTTGTTTGCAC+TGG | 0.357347 | 4.1:+85386791 | None:intergenic |
GAGAAGAATCAGCTGCAATT+TGG | 0.366023 | 4.1:-85387005 | MS.gene026765:CDS |
GGAGCACTATTTGGTGCTTT+CGG | 0.377101 | 4.1:+85386936 | None:intergenic |
GGAATTTCTTAGCTTTGTAA+TGG | 0.399282 | 4.1:-85385301 | MS.gene026765:CDS |
TTCTTTAAGTTTACACCGCT+TGG | 0.426766 | 4.1:+85386141 | None:intergenic |
TTCTGTGGAAGATGATGAAT+CGG | 0.440888 | 4.1:-85385202 | MS.gene026765:CDS |
TGCAGCTGATTCTTCTCCAC+AGG | 0.448468 | 4.1:+85387011 | None:intergenic |
TGCATAACAGCATGCCCATT+AGG | 0.448913 | 4.1:+85386603 | None:intergenic |
CCAGTTTACAAATTTGAGCT+TGG | 0.451670 | 4.1:-85386721 | MS.gene026765:CDS |
TCCTGCAAAAGCTGAACAAA+AGG | 0.451972 | 4.1:+85386492 | None:intergenic |
GACGAATTACTGAAGCTTGA+AGG | 0.453272 | 4.1:-85385267 | MS.gene026765:CDS |
GTGCTTTCGGTGAATTTGGC+AGG | 0.453991 | 4.1:+85386949 | None:intergenic |
CCTCGAGGCCTTATTAACTC+TGG | 0.457487 | 4.1:-85386564 | MS.gene026765:CDS |
TGCAACAGTGCAGGCTCTCA+TGG | 0.460184 | 4.1:-85386523 | MS.gene026765:CDS |
CAAAATTTGGTGATAACTAA+AGG | 0.475469 | 4.1:-85385090 | None:intergenic |
GACTCAAAGCTTTATTCCCT+CGG | 0.489495 | 4.1:-85385142 | MS.gene026765:CDS |
TTTGAGCTTGGATGCTTCTG+AGG | 0.501647 | 4.1:-85386709 | MS.gene026765:CDS |
CTTCCTTAGTGCAACAGTGC+AGG | 0.507270 | 4.1:-85386532 | MS.gene026765:CDS |
TTTATAGTTTCTGTTACTTG+AGG | 0.515498 | 4.1:+85386861 | None:intergenic |
CTCGAGGCCTTATTAACTCT+GGG | 0.522645 | 4.1:-85386563 | MS.gene026765:CDS |
GAAATGCTATTTGGCACATC+CGG | 0.523496 | 4.1:+85386042 | None:intergenic |
TTTCAGGCAAGAAGATGCTC+AGG | 0.523624 | 4.1:-85385322 | MS.gene026765:intron |
GGCATTACTAATTTCTCCGA+CGG | 0.529348 | 4.1:-85386828 | MS.gene026765:CDS |
ACAGAAACTATAAAAGAGAA+TGG | 0.530330 | 4.1:-85386852 | MS.gene026765:CDS |
AAAATACCATTTAATTCCGA+GGG | 0.530612 | 4.1:+85385126 | None:intergenic |
GATGATGAATCGGAAACAGT+AGG | 0.571313 | 4.1:-85385192 | MS.gene026765:CDS |
AGAATAAATCTGTTGTTACA+AGG | 0.579251 | 4.1:-85385164 | MS.gene026765:CDS |
AAGAGCTCGTACCATTCCTA+AGG | 0.579648 | 4.1:-85386466 | MS.gene026765:intron |
GAGCCTGCACTGTTGCACTA+AGG | 0.586819 | 4.1:+85386529 | None:intergenic |
ATGATGAATCGGAAACAGTA+GGG | 0.591564 | 4.1:-85385191 | MS.gene026765:CDS |
TGCGAGAAATGAAAAGCCTG+TGG | 0.616964 | 4.1:-85387027 | MS.gene026765:CDS |
GTCAAGGATCTTCAGCCTCG+AGG | 0.628925 | 4.1:-85386579 | MS.gene026765:CDS |
AGGACAGACTACCTTAGGAA+TGG | 0.633984 | 4.1:+85386455 | None:intergenic |
AATTTCTGAGAATAATGGCG+AGG | 0.673086 | 4.1:+85386915 | None:intergenic |
ATAGCATTTCAGGAAGACCA+AGG | 0.674813 | 4.1:-85386029 | MS.gene026765:intron |
GAACATCTTCAAACATAACA+GGG | 0.680728 | 4.1:+85386079 | None:intergenic |
GCATGCTGTTATGCATGTCA+AGG | 0.691718 | 4.1:-85386595 | MS.gene026765:CDS |
GAAACTATAAAAGAGAATGG+CGG | 0.694660 | 4.1:-85386849 | MS.gene026765:CDS |
ACTCAATTTGACATGCCAAG+CGG | 0.702135 | 4.1:-85386156 | MS.gene026765:CDS |
CCAGAGTTAATAAGGCCTCG+AGG | 0.730888 | 4.1:+85386564 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATATATATATATATATAT+AGG | - | chr4.1:85386519-85386538 | MS.gene026765:CDS | 0.0% |
!! | TATATATATATATATATATA+GGG | - | chr4.1:85386520-85386539 | MS.gene026765:CDS | 0.0% |
!!! | TTATTACTGTGTAATTTTTT+AGG | - | chr4.1:85386012-85386031 | MS.gene026765:intron | 15.0% |
!! | AACTCCTAAAAAAAAAAAAG+CGG | + | chr4.1:85386634-85386653 | None:intergenic | 20.0% |
!! | ATATATGTCCATAGAAAATT+AGG | + | chr4.1:85386426-85386445 | None:intergenic | 20.0% |
!! | CATTATTCTCAGAAATTTAA+AGG | - | chr4.1:85385320-85385339 | MS.gene026765:intron | 20.0% |
!! | GAAATTTATACACAATATTC+AGG | - | chr4.1:85386772-85386791 | MS.gene026765:CDS | 20.0% |
!! | GAATATTGTGTATAAATTTC+AGG | + | chr4.1:85386772-85386791 | None:intergenic | 20.0% |
!! | TCATGAAAATAATTGAGAAA+TGG | - | chr4.1:85386476-85386495 | MS.gene026765:CDS | 20.0% |
!! | TTAAACTGTAAGATTGTATA+AGG | - | chr4.1:85385095-85385114 | MS.gene026765:CDS | 20.0% |
!!! | CTTTAAATTTCTGAGAATAA+TGG | + | chr4.1:85385322-85385341 | None:intergenic | 20.0% |
!!! | TGTAATTTTTATGATACTCA+TGG | - | chr4.1:85386870-85386889 | MS.gene026765:CDS | 20.0% |
! | AAAAATACCATTTAATTCCG+AGG | + | chr4.1:85387107-85387126 | None:intergenic | 25.0% |
! | AAAATACCATTTAATTCCGA+GGG | + | chr4.1:85387106-85387125 | None:intergenic | 25.0% |
! | ACAGAAACTATAAAAGAGAA+TGG | - | chr4.1:85385377-85385396 | MS.gene026765:intron | 25.0% |
! | ACTCCTAAAAAAAAAAAAGC+GGG | + | chr4.1:85386633-85386652 | None:intergenic | 25.0% |
! | AGAATAAATCTGTTGTTACA+AGG | - | chr4.1:85387065-85387084 | MS.gene026765:intron | 25.0% |
! | ATAAATTCCCAGAGTTAATA+AGG | + | chr4.1:85385676-85385695 | None:intergenic | 25.0% |
! | ATTTAACCAAGACTTGAAAA+AGG | - | chr4.1:85385601-85385620 | MS.gene026765:intron | 25.0% |
! | GAGTAGAAAAGCTATTATAA+AGG | + | chr4.1:85386674-85386693 | None:intergenic | 25.0% |
! | GTAACAACAGATTTATTCTT+TGG | + | chr4.1:85387064-85387083 | None:intergenic | 25.0% |
! | TTATTGAATGAACCATCATA+TGG | - | chr4.1:85386746-85386765 | MS.gene026765:CDS | 25.0% |
! | TTGAAGAATGTGTTCAAAAA+TGG | - | chr4.1:85385551-85385570 | MS.gene026765:intron | 25.0% |
!! | ATTTTCTATGGACATATATG+TGG | - | chr4.1:85386427-85386446 | MS.gene026765:intron | 25.0% |
!! | CTTTAGTTATCACCAAATTT+TGG | + | chr4.1:85387141-85387160 | None:intergenic | 25.0% |
!! | TCGGAATTAAATGGTATTTT+TGG | - | chr4.1:85387106-85387125 | MS.gene026765:intron | 25.0% |
!! | TTGAACTTTTCTGATTACAA+GGG | + | chr4.1:85385975-85385994 | None:intergenic | 25.0% |
!! | TTTATAGTTTCTGTTACTTG+AGG | + | chr4.1:85385371-85385390 | None:intergenic | 25.0% |
!! | TTTGAACTTTTCTGATTACA+AGG | + | chr4.1:85385976-85385995 | None:intergenic | 25.0% |
!!! | GAATTAAATGGTATTTTTGG+AGG | - | chr4.1:85387109-85387128 | MS.gene026765:intron | 25.0% |
!!! | GATACAGATTCTTTTAAGTT+TGG | - | chr4.1:85386115-85386134 | MS.gene026765:CDS | 25.0% |
!!! | TACTGTGTAATTTTTTAGGT+TGG | - | chr4.1:85386016-85386035 | MS.gene026765:intron | 25.0% |
!!! | TGTTCTGAAAATTTTTACTC+CGG | - | chr4.1:85386168-85386187 | MS.gene026765:CDS | 25.0% |
AATGTGTTCAAAAATGGTAG+TGG | - | chr4.1:85385557-85385576 | MS.gene026765:intron | 30.0% | |
AATTAAATTGTCACCAACCT+TGG | + | chr4.1:85386220-85386239 | None:intergenic | 30.0% | |
AATTGTAACTCTCAGTGTAT+AGG | + | chr4.1:85386603-85386622 | None:intergenic | 30.0% | |
AGAACATCTTCAAACATAAC+AGG | + | chr4.1:85386154-85386173 | None:intergenic | 30.0% | |
ATAAATTTCAGGCCATATGA+TGG | + | chr4.1:85386761-85386780 | None:intergenic | 30.0% | |
ATTCGACTAAAAAAGTGGTT+AGG | + | chr4.1:85386355-85386374 | None:intergenic | 30.0% | |
CCATAGAAAATTAGGCAATT+AGG | + | chr4.1:85386418-85386437 | None:intergenic | 30.0% | |
GAAACTATAAAAGAGAATGG+CGG | - | chr4.1:85385380-85385399 | MS.gene026765:intron | 30.0% | |
GAACATCTTCAAACATAACA+GGG | + | chr4.1:85386153-85386172 | None:intergenic | 30.0% | |
TTCGACTAAAAAAGTGGTTA+GGG | + | chr4.1:85386354-85386373 | None:intergenic | 30.0% | |
TTTATTCCCTCGGAATTAAA+TGG | - | chr4.1:85387097-85387116 | MS.gene026765:intron | 30.0% | |
TTTGAATTTACGAGAGTGAT+GGG | - | chr4.1:85385139-85385158 | MS.gene026765:CDS | 30.0% | |
! | ATATATGAAAAGTCTTGTCC+TGG | + | chr4.1:85386324-85386343 | None:intergenic | 30.0% |
! | CCTAATTGCCTAATTTTCTA+TGG | - | chr4.1:85386415-85386434 | MS.gene026765:intron | 30.0% |
! | TATATGAAAAGTCTTGTCCT+GGG | + | chr4.1:85386323-85386342 | None:intergenic | 30.0% |
! | TTCTTTAACTTTGTTTGCAC+TGG | + | chr4.1:85385441-85385460 | None:intergenic | 30.0% |
!! | GGAATTTCTTAGCTTTGTAA+TGG | - | chr4.1:85386928-85386947 | MS.gene026765:CDS | 30.0% |
!!! | AACTTTTCTAGTTTCTTCTG+TGG | - | chr4.1:85387012-85387031 | MS.gene026765:CDS | 30.0% |
!!! | AAGCCCGCTTTTTTTTTTTT+AGG | - | chr4.1:85386627-85386646 | MS.gene026765:CDS | 30.0% |
!!! | AGATTCTTTTAAGTTTGGAC+GGG | - | chr4.1:85386120-85386139 | MS.gene026765:CDS | 30.0% |
!!! | CAGATTCTTTTAAGTTTGGA+CGG | - | chr4.1:85386119-85386138 | MS.gene026765:CDS | 30.0% |
AAACTCTACTACATGAATGC+AGG | + | chr4.1:85385122-85385141 | None:intergenic | 35.0% | |
ATGATGAATCGGAAACAGTA+GGG | - | chr4.1:85387038-85387057 | MS.gene026765:intron | 35.0% | |
ATGCTTAGGTATGATGTGAT+TGG | - | chr4.1:85386833-85386852 | MS.gene026765:CDS | 35.0% | |
CAACGATTCGACTAAAAAAG+TGG | + | chr4.1:85386360-85386379 | None:intergenic | 35.0% | |
CCAAGCTCAAATTTGTAAAC+TGG | + | chr4.1:85385511-85385530 | None:intergenic | 35.0% | |
CCAGTTTACAAATTTGAGCT+TGG | - | chr4.1:85385508-85385527 | MS.gene026765:intron | 35.0% | |
GTTACACCAATTGACGAAAA+TGG | - | chr4.1:85385476-85385495 | MS.gene026765:intron | 35.0% | |
GTTTGAATTTACGAGAGTGA+TGG | - | chr4.1:85385138-85385157 | MS.gene026765:CDS | 35.0% | |
TTCTGTGGAAGATGATGAAT+CGG | - | chr4.1:85387027-85387046 | MS.gene026765:CDS | 35.0% | |
! | AATTTCTGAGAATAATGGCG+AGG | + | chr4.1:85385317-85385336 | None:intergenic | 35.0% |
! | GCATATACTGATTGTGATTG+TGG | + | chr4.1:85386393-85386412 | None:intergenic | 35.0% |
! | TCAGCAAATGCTTTTAGTGT+GGG | + | chr4.1:85386046-85386065 | None:intergenic | 35.0% |
! | TTCTTTAAGTTTACACCGCT+TGG | + | chr4.1:85386091-85386110 | None:intergenic | 35.0% |
!! | ACTTGAAAAAGGCACCTAAT+GGG | - | chr4.1:85385612-85385631 | MS.gene026765:intron | 35.0% |
!! | TTTGCACTGGTGATTTTTGA+GGG | + | chr4.1:85385428-85385447 | None:intergenic | 35.0% |
ACCCTGAAACTGTATCATTG+CGG | - | chr4.1:85385165-85385184 | MS.gene026765:CDS | 40.0% | |
ACTCAATTTGACATGCCAAG+CGG | - | chr4.1:85386073-85386092 | MS.gene026765:CDS | 40.0% | |
ATAGCATTTCAGGAAGACCA+AGG | - | chr4.1:85386200-85386219 | MS.gene026765:intron | 40.0% | |
CTGTATCATTGCGGGTAAAA+AGG | - | chr4.1:85385174-85385193 | MS.gene026765:CDS | 40.0% | |
GACGAATTACTGAAGCTTGA+AGG | - | chr4.1:85386962-85386981 | MS.gene026765:CDS | 40.0% | |
GAGAAGAATCAGCTGCAATT+TGG | - | chr4.1:85385224-85385243 | MS.gene026765:CDS | 40.0% | |
GATGATGAATCGGAAACAGT+AGG | - | chr4.1:85387037-85387056 | MS.gene026765:intron | 40.0% | |
GATGTGCCAAATAGCATTTC+AGG | - | chr4.1:85386190-85386209 | MS.gene026765:CDS | 40.0% | |
GGACAGTCTTCAAGTCTTAA+TGG | - | chr4.1:85386983-85387002 | MS.gene026765:CDS | 40.0% | |
GGCATTACTAATTTCTCCGA+CGG | - | chr4.1:85385401-85385420 | MS.gene026765:intron | 40.0% | |
GGTCTTCCTGAAATGCTATT+TGG | + | chr4.1:85386199-85386218 | None:intergenic | 40.0% | |
GTTGTTGATATATGCAGCAG+AGG | + | chr4.1:85385797-85385816 | None:intergenic | 40.0% | |
TCCTGCAAAAGCTGAACAAA+AGG | + | chr4.1:85385740-85385759 | None:intergenic | 40.0% | |
TGGAGGACAACTCCAAAATT+TGG | - | chr4.1:85387126-85387145 | MS.gene026765:intron | 40.0% | |
TTATGCTACTCCCACTTAGT+GGG | - | chr4.1:85386258-85386277 | MS.gene026765:intron | 40.0% | |
TTTATGCTACTCCCACTTAG+TGG | - | chr4.1:85386257-85386276 | MS.gene026765:intron | 40.0% | |
! | CTCAGCAAATGCTTTTAGTG+TGG | + | chr4.1:85386047-85386066 | None:intergenic | 40.0% |
! | GAAATGCTATTTGGCACATC+CGG | + | chr4.1:85386190-85386209 | None:intergenic | 40.0% |
! | GCAGTACCATTTTCGTCAAT+TGG | + | chr4.1:85385485-85385504 | None:intergenic | 40.0% |
! | TCCTTTTGTTCAGCTTTTGC+AGG | - | chr4.1:85385736-85385755 | MS.gene026765:intron | 40.0% |
!! | GACTCAAAGCTTTATTCCCT+CGG | - | chr4.1:85387087-85387106 | MS.gene026765:intron | 40.0% |
!! | GACTTGAAAAAGGCACCTAA+TGG | - | chr4.1:85385611-85385630 | MS.gene026765:intron | 40.0% |
!! | GTGTTCAAAAATGGTAGTGG+TGG | - | chr4.1:85385560-85385579 | MS.gene026765:intron | 40.0% |
!! | GTTTGCACTGGTGATTTTTG+AGG | + | chr4.1:85385429-85385448 | None:intergenic | 40.0% |
!! | TTTGGTGCTTTCGGTGAATT+TGG | + | chr4.1:85385287-85385306 | None:intergenic | 40.0% |
!!! | TAGGTGCCTTTTTCAAGTCT+TGG | + | chr4.1:85385610-85385629 | None:intergenic | 40.0% |
AAGAGCTCGTACCATTCCTA+AGG | - | chr4.1:85385763-85385782 | MS.gene026765:intron | 45.0% | |
ACCCGCAATGATACAGTTTC+AGG | + | chr4.1:85385170-85385189 | None:intergenic | 45.0% | |
AGCATCTTCTTGCCTGAAAG+TGG | + | chr4.1:85386906-85386925 | None:intergenic | 45.0% | |
AGGACAGACTACCTTAGGAA+TGG | + | chr4.1:85385777-85385796 | None:intergenic | 45.0% | |
CAAGTCGTATCCCACTAAGT+GGG | + | chr4.1:85386271-85386290 | None:intergenic | 45.0% | |
CATTTCAGGAAGACCAAGGT+TGG | - | chr4.1:85386204-85386223 | MS.gene026765:intron | 45.0% | |
CCCGCAATGATACAGTTTCA+GGG | + | chr4.1:85385169-85385188 | None:intergenic | 45.0% | |
CCCTGAAACTGTATCATTGC+GGG | - | chr4.1:85385166-85385185 | MS.gene026765:CDS | 45.0% | |
GCATGCTGTTATGCATGTCA+AGG | - | chr4.1:85385634-85385653 | MS.gene026765:intron | 45.0% | |
TGCAATGCAGTCACATGCTT+AGG | - | chr4.1:85386819-85386838 | MS.gene026765:CDS | 45.0% | |
TGCATAACAGCATGCCCATT+AGG | + | chr4.1:85385629-85385648 | None:intergenic | 45.0% | |
TGCGAGAAATGAAAAGCCTG+TGG | - | chr4.1:85385202-85385221 | MS.gene026765:CDS | 45.0% | |
TTTCAGGCAAGAAGATGCTC+AGG | - | chr4.1:85386907-85386926 | MS.gene026765:CDS | 45.0% | |
TTTGAGCTTGGATGCTTCTG+AGG | - | chr4.1:85385520-85385539 | MS.gene026765:intron | 45.0% | |
!! | CTCGAGGCCTTATTAACTCT+GGG | - | chr4.1:85385666-85385685 | MS.gene026765:intron | 45.0% |
!! | GGAGCACTATTTGGTGCTTT+CGG | + | chr4.1:85385296-85385315 | None:intergenic | 45.0% |
!! | TAATGGCGAGGAGCACTATT+TGG | + | chr4.1:85385305-85385324 | None:intergenic | 45.0% |
AGCAGAGGACAGACTACCTT+AGG | + | chr4.1:85385782-85385801 | None:intergenic | 50.0% | |
CCAAGTCGTATCCCACTAAG+TGG | + | chr4.1:85386272-85386291 | None:intergenic | 50.0% | |
CCACTTAGTGGGATACGACT+TGG | - | chr4.1:85386269-85386288 | MS.gene026765:intron | 50.0% | |
CCAGAGTTAATAAGGCCTCG+AGG | + | chr4.1:85385668-85385687 | None:intergenic | 50.0% | |
CTTCCTTAGTGCAACAGTGC+AGG | - | chr4.1:85385697-85385716 | MS.gene026765:intron | 50.0% | |
GTGCTTTCGGTGAATTTGGC+AGG | + | chr4.1:85385283-85385302 | None:intergenic | 50.0% | |
! | GAAAAGTCTTGTCCTGGGCA+GGG | + | chr4.1:85386318-85386337 | None:intergenic | 50.0% |
! | TGAAAAGTCTTGTCCTGGGC+AGG | + | chr4.1:85386319-85386338 | None:intergenic | 50.0% |
! | TGCAGCTGATTCTTCTCCAC+AGG | + | chr4.1:85385221-85385240 | None:intergenic | 50.0% |
!! | CCTCGAGGCCTTATTAACTC+TGG | - | chr4.1:85385665-85385684 | MS.gene026765:intron | 50.0% |
!! | GGTGATTTTTGAGGGACCGT+CGG | + | chr4.1:85385420-85385439 | None:intergenic | 50.0% |
CTTGCCTGAAAGTGGCACGT+TGG | + | chr4.1:85386898-85386917 | None:intergenic | 55.0% | |
GAGCCTGCACTGTTGCACTA+AGG | + | chr4.1:85385703-85385722 | None:intergenic | 55.0% | |
GTCAAGGATCTTCAGCCTCG+AGG | - | chr4.1:85385650-85385669 | MS.gene026765:intron | 55.0% | |
TATGCTACTCTTCCCTGCCC+AGG | - | chr4.1:85386303-85386322 | MS.gene026765:intron | 55.0% | |
TGCAACAGTGCAGGCTCTCA+TGG | - | chr4.1:85385706-85385725 | MS.gene026765:intron | 55.0% | |
!! | GGTACCAACGTGCCACTTTC+AGG | - | chr4.1:85386891-85386910 | MS.gene026765:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 85385091 | 85387160 | 85385091 | ID=MS.gene026765 |
chr4.1 | mRNA | 85385091 | 85387160 | 85385091 | ID=MS.gene026765.t1;Parent=MS.gene026765 |
chr4.1 | exon | 85387150 | 85387160 | 85387150 | ID=MS.gene026765.t1.exon1;Parent=MS.gene026765.t1 |
chr4.1 | CDS | 85387150 | 85387160 | 85387150 | ID=cds.MS.gene026765.t1;Parent=MS.gene026765.t1 |
chr4.1 | exon | 85386467 | 85387055 | 85386467 | ID=MS.gene026765.t1.exon2;Parent=MS.gene026765.t1 |
chr4.1 | CDS | 85386467 | 85387055 | 85386467 | ID=cds.MS.gene026765.t1;Parent=MS.gene026765.t1 |
chr4.1 | exon | 85386030 | 85386217 | 85386030 | ID=MS.gene026765.t1.exon3;Parent=MS.gene026765.t1 |
chr4.1 | CDS | 85386030 | 85386217 | 85386030 | ID=cds.MS.gene026765.t1;Parent=MS.gene026765.t1 |
chr4.1 | exon | 85385091 | 85385338 | 85385091 | ID=MS.gene026765.t1.exon4;Parent=MS.gene026765.t1 |
chr4.1 | CDS | 85385091 | 85385338 | 85385091 | ID=cds.MS.gene026765.t1;Parent=MS.gene026765.t1 |
Gene Sequence |
Protein sequence |