Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026765.t1 | XP_003595735.1 | 93 | 343 | 24 | 0 | 3 | 345 | 23 | 365 | 1.10E-172 | 615.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026765.t1 | Q9FPS3 | 43.9 | 358 | 175 | 8 | 8 | 345 | 30 | 381 | 1.2e-61 | 238.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026765.t1 | G7IGQ8 | 93.0 | 343 | 24 | 0 | 3 | 345 | 23 | 365 | 8.1e-173 | 615.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene06786 | MS.gene026765 | PPI |
| MS.gene58136 | MS.gene026765 | PPI |
| MS.gene58134 | MS.gene026765 | PPI |
| MS.gene28183 | MS.gene026765 | PPI |
| MS.gene030686 | MS.gene026765 | PPI |
| MS.gene026765 | MS.gene06541 | PPI |
| MS.gene049411 | MS.gene026765 | PPI |
| MS.gene28454 | MS.gene026765 | PPI |
| MS.gene013441 | MS.gene026765 | PPI |
| MS.gene70283 | MS.gene026765 | PPI |
| MS.gene70282 | MS.gene026765 | PPI |
| MS.gene030685 | MS.gene026765 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026765.t1 | MTR_2g060050 | 93.003 | 343 | 24 | 0 | 3 | 345 | 23 | 365 | 0.0 | 640 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026765.t1 | AT4G30890 | 62.500 | 192 | 69 | 2 | 156 | 345 | 191 | 381 | 9.80e-76 | 243 |
| MS.gene026765.t1 | AT4G30890 | 62.500 | 192 | 69 | 2 | 156 | 345 | 191 | 381 | 9.80e-76 | 243 |
| MS.gene026765.t1 | AT4G30890 | 62.500 | 192 | 69 | 2 | 156 | 345 | 191 | 381 | 9.80e-76 | 243 |
Find 56 sgRNAs with CRISPR-Local
Find 129 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTATTCTCAGAAATTTAA+AGG | 0.166354 | 4.1:-85386909 | MS.gene026765:CDS |
| TGGAGGACAACTCCAAAATT+TGG | 0.196841 | 4.1:-85385103 | MS.gene026765:CDS |
| CTTTAGTTATCACCAAATTT+TGG | 0.210978 | 4.1:+85385091 | None:intergenic |
| GTTACACCAATTGACGAAAA+TGG | 0.235400 | 4.1:-85386753 | MS.gene026765:CDS |
| TTTATTCCCTCGGAATTAAA+TGG | 0.250861 | 4.1:-85385132 | MS.gene026765:CDS |
| GTAACAACAGATTTATTCTT+TGG | 0.252796 | 4.1:+85385168 | None:intergenic |
| GGTCTTCCTGAAATGCTATT+TGG | 0.264675 | 4.1:+85386033 | None:intergenic |
| CTTTAAATTTCTGAGAATAA+TGG | 0.266832 | 4.1:+85386910 | None:intergenic |
| TTTGGTGCTTTCGGTGAATT+TGG | 0.281536 | 4.1:+85386945 | None:intergenic |
| AGAACATCTTCAAACATAAC+AGG | 0.295458 | 4.1:+85386078 | None:intergenic |
| GATGTGCCAAATAGCATTTC+AGG | 0.297505 | 4.1:-85386039 | MS.gene026765:CDS |
| ATAAATTCCCAGAGTTAATA+AGG | 0.309476 | 4.1:+85386556 | None:intergenic |
| CCAAGCTCAAATTTGTAAAC+TGG | 0.311830 | 4.1:+85386721 | None:intergenic |
| ATTTAACCAAGACTTGAAAA+AGG | 0.314327 | 4.1:-85386628 | MS.gene026765:CDS |
| TAATGGCGAGGAGCACTATT+TGG | 0.332957 | 4.1:+85386927 | None:intergenic |
| GGACAGTCTTCAAGTCTTAA+TGG | 0.340469 | 4.1:-85385246 | MS.gene026765:CDS |
| TTCTTTAACTTTGTTTGCAC+TGG | 0.357347 | 4.1:+85386791 | None:intergenic |
| GAGAAGAATCAGCTGCAATT+TGG | 0.366023 | 4.1:-85387005 | MS.gene026765:CDS |
| GGAGCACTATTTGGTGCTTT+CGG | 0.377101 | 4.1:+85386936 | None:intergenic |
| GGAATTTCTTAGCTTTGTAA+TGG | 0.399282 | 4.1:-85385301 | MS.gene026765:CDS |
| TTCTTTAAGTTTACACCGCT+TGG | 0.426766 | 4.1:+85386141 | None:intergenic |
| TTCTGTGGAAGATGATGAAT+CGG | 0.440888 | 4.1:-85385202 | MS.gene026765:CDS |
| TGCAGCTGATTCTTCTCCAC+AGG | 0.448468 | 4.1:+85387011 | None:intergenic |
| TGCATAACAGCATGCCCATT+AGG | 0.448913 | 4.1:+85386603 | None:intergenic |
| CCAGTTTACAAATTTGAGCT+TGG | 0.451670 | 4.1:-85386721 | MS.gene026765:CDS |
| TCCTGCAAAAGCTGAACAAA+AGG | 0.451972 | 4.1:+85386492 | None:intergenic |
| GACGAATTACTGAAGCTTGA+AGG | 0.453272 | 4.1:-85385267 | MS.gene026765:CDS |
| GTGCTTTCGGTGAATTTGGC+AGG | 0.453991 | 4.1:+85386949 | None:intergenic |
| CCTCGAGGCCTTATTAACTC+TGG | 0.457487 | 4.1:-85386564 | MS.gene026765:CDS |
| TGCAACAGTGCAGGCTCTCA+TGG | 0.460184 | 4.1:-85386523 | MS.gene026765:CDS |
| CAAAATTTGGTGATAACTAA+AGG | 0.475469 | 4.1:-85385090 | None:intergenic |
| GACTCAAAGCTTTATTCCCT+CGG | 0.489495 | 4.1:-85385142 | MS.gene026765:CDS |
| TTTGAGCTTGGATGCTTCTG+AGG | 0.501647 | 4.1:-85386709 | MS.gene026765:CDS |
| CTTCCTTAGTGCAACAGTGC+AGG | 0.507270 | 4.1:-85386532 | MS.gene026765:CDS |
| TTTATAGTTTCTGTTACTTG+AGG | 0.515498 | 4.1:+85386861 | None:intergenic |
| CTCGAGGCCTTATTAACTCT+GGG | 0.522645 | 4.1:-85386563 | MS.gene026765:CDS |
| GAAATGCTATTTGGCACATC+CGG | 0.523496 | 4.1:+85386042 | None:intergenic |
| TTTCAGGCAAGAAGATGCTC+AGG | 0.523624 | 4.1:-85385322 | MS.gene026765:intron |
| GGCATTACTAATTTCTCCGA+CGG | 0.529348 | 4.1:-85386828 | MS.gene026765:CDS |
| ACAGAAACTATAAAAGAGAA+TGG | 0.530330 | 4.1:-85386852 | MS.gene026765:CDS |
| AAAATACCATTTAATTCCGA+GGG | 0.530612 | 4.1:+85385126 | None:intergenic |
| GATGATGAATCGGAAACAGT+AGG | 0.571313 | 4.1:-85385192 | MS.gene026765:CDS |
| AGAATAAATCTGTTGTTACA+AGG | 0.579251 | 4.1:-85385164 | MS.gene026765:CDS |
| AAGAGCTCGTACCATTCCTA+AGG | 0.579648 | 4.1:-85386466 | MS.gene026765:intron |
| GAGCCTGCACTGTTGCACTA+AGG | 0.586819 | 4.1:+85386529 | None:intergenic |
| ATGATGAATCGGAAACAGTA+GGG | 0.591564 | 4.1:-85385191 | MS.gene026765:CDS |
| TGCGAGAAATGAAAAGCCTG+TGG | 0.616964 | 4.1:-85387027 | MS.gene026765:CDS |
| GTCAAGGATCTTCAGCCTCG+AGG | 0.628925 | 4.1:-85386579 | MS.gene026765:CDS |
| AGGACAGACTACCTTAGGAA+TGG | 0.633984 | 4.1:+85386455 | None:intergenic |
| AATTTCTGAGAATAATGGCG+AGG | 0.673086 | 4.1:+85386915 | None:intergenic |
| ATAGCATTTCAGGAAGACCA+AGG | 0.674813 | 4.1:-85386029 | MS.gene026765:intron |
| GAACATCTTCAAACATAACA+GGG | 0.680728 | 4.1:+85386079 | None:intergenic |
| GCATGCTGTTATGCATGTCA+AGG | 0.691718 | 4.1:-85386595 | MS.gene026765:CDS |
| GAAACTATAAAAGAGAATGG+CGG | 0.694660 | 4.1:-85386849 | MS.gene026765:CDS |
| ACTCAATTTGACATGCCAAG+CGG | 0.702135 | 4.1:-85386156 | MS.gene026765:CDS |
| CCAGAGTTAATAAGGCCTCG+AGG | 0.730888 | 4.1:+85386564 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+AGG | - | chr4.1:85386519-85386538 | MS.gene026765:CDS | 0.0% |
| !! | TATATATATATATATATATA+GGG | - | chr4.1:85386520-85386539 | MS.gene026765:CDS | 0.0% |
| !!! | TTATTACTGTGTAATTTTTT+AGG | - | chr4.1:85386012-85386031 | MS.gene026765:intron | 15.0% |
| !! | AACTCCTAAAAAAAAAAAAG+CGG | + | chr4.1:85386634-85386653 | None:intergenic | 20.0% |
| !! | ATATATGTCCATAGAAAATT+AGG | + | chr4.1:85386426-85386445 | None:intergenic | 20.0% |
| !! | CATTATTCTCAGAAATTTAA+AGG | - | chr4.1:85385320-85385339 | MS.gene026765:intron | 20.0% |
| !! | GAAATTTATACACAATATTC+AGG | - | chr4.1:85386772-85386791 | MS.gene026765:CDS | 20.0% |
| !! | GAATATTGTGTATAAATTTC+AGG | + | chr4.1:85386772-85386791 | None:intergenic | 20.0% |
| !! | TCATGAAAATAATTGAGAAA+TGG | - | chr4.1:85386476-85386495 | MS.gene026765:CDS | 20.0% |
| !! | TTAAACTGTAAGATTGTATA+AGG | - | chr4.1:85385095-85385114 | MS.gene026765:CDS | 20.0% |
| !!! | CTTTAAATTTCTGAGAATAA+TGG | + | chr4.1:85385322-85385341 | None:intergenic | 20.0% |
| !!! | TGTAATTTTTATGATACTCA+TGG | - | chr4.1:85386870-85386889 | MS.gene026765:CDS | 20.0% |
| ! | AAAAATACCATTTAATTCCG+AGG | + | chr4.1:85387107-85387126 | None:intergenic | 25.0% |
| ! | AAAATACCATTTAATTCCGA+GGG | + | chr4.1:85387106-85387125 | None:intergenic | 25.0% |
| ! | ACAGAAACTATAAAAGAGAA+TGG | - | chr4.1:85385377-85385396 | MS.gene026765:intron | 25.0% |
| ! | ACTCCTAAAAAAAAAAAAGC+GGG | + | chr4.1:85386633-85386652 | None:intergenic | 25.0% |
| ! | AGAATAAATCTGTTGTTACA+AGG | - | chr4.1:85387065-85387084 | MS.gene026765:intron | 25.0% |
| ! | ATAAATTCCCAGAGTTAATA+AGG | + | chr4.1:85385676-85385695 | None:intergenic | 25.0% |
| ! | ATTTAACCAAGACTTGAAAA+AGG | - | chr4.1:85385601-85385620 | MS.gene026765:intron | 25.0% |
| ! | GAGTAGAAAAGCTATTATAA+AGG | + | chr4.1:85386674-85386693 | None:intergenic | 25.0% |
| ! | GTAACAACAGATTTATTCTT+TGG | + | chr4.1:85387064-85387083 | None:intergenic | 25.0% |
| ! | TTATTGAATGAACCATCATA+TGG | - | chr4.1:85386746-85386765 | MS.gene026765:CDS | 25.0% |
| ! | TTGAAGAATGTGTTCAAAAA+TGG | - | chr4.1:85385551-85385570 | MS.gene026765:intron | 25.0% |
| !! | ATTTTCTATGGACATATATG+TGG | - | chr4.1:85386427-85386446 | MS.gene026765:intron | 25.0% |
| !! | CTTTAGTTATCACCAAATTT+TGG | + | chr4.1:85387141-85387160 | None:intergenic | 25.0% |
| !! | TCGGAATTAAATGGTATTTT+TGG | - | chr4.1:85387106-85387125 | MS.gene026765:intron | 25.0% |
| !! | TTGAACTTTTCTGATTACAA+GGG | + | chr4.1:85385975-85385994 | None:intergenic | 25.0% |
| !! | TTTATAGTTTCTGTTACTTG+AGG | + | chr4.1:85385371-85385390 | None:intergenic | 25.0% |
| !! | TTTGAACTTTTCTGATTACA+AGG | + | chr4.1:85385976-85385995 | None:intergenic | 25.0% |
| !!! | GAATTAAATGGTATTTTTGG+AGG | - | chr4.1:85387109-85387128 | MS.gene026765:intron | 25.0% |
| !!! | GATACAGATTCTTTTAAGTT+TGG | - | chr4.1:85386115-85386134 | MS.gene026765:CDS | 25.0% |
| !!! | TACTGTGTAATTTTTTAGGT+TGG | - | chr4.1:85386016-85386035 | MS.gene026765:intron | 25.0% |
| !!! | TGTTCTGAAAATTTTTACTC+CGG | - | chr4.1:85386168-85386187 | MS.gene026765:CDS | 25.0% |
| AATGTGTTCAAAAATGGTAG+TGG | - | chr4.1:85385557-85385576 | MS.gene026765:intron | 30.0% | |
| AATTAAATTGTCACCAACCT+TGG | + | chr4.1:85386220-85386239 | None:intergenic | 30.0% | |
| AATTGTAACTCTCAGTGTAT+AGG | + | chr4.1:85386603-85386622 | None:intergenic | 30.0% | |
| AGAACATCTTCAAACATAAC+AGG | + | chr4.1:85386154-85386173 | None:intergenic | 30.0% | |
| ATAAATTTCAGGCCATATGA+TGG | + | chr4.1:85386761-85386780 | None:intergenic | 30.0% | |
| ATTCGACTAAAAAAGTGGTT+AGG | + | chr4.1:85386355-85386374 | None:intergenic | 30.0% | |
| CCATAGAAAATTAGGCAATT+AGG | + | chr4.1:85386418-85386437 | None:intergenic | 30.0% | |
| GAAACTATAAAAGAGAATGG+CGG | - | chr4.1:85385380-85385399 | MS.gene026765:intron | 30.0% | |
| GAACATCTTCAAACATAACA+GGG | + | chr4.1:85386153-85386172 | None:intergenic | 30.0% | |
| TTCGACTAAAAAAGTGGTTA+GGG | + | chr4.1:85386354-85386373 | None:intergenic | 30.0% | |
| TTTATTCCCTCGGAATTAAA+TGG | - | chr4.1:85387097-85387116 | MS.gene026765:intron | 30.0% | |
| TTTGAATTTACGAGAGTGAT+GGG | - | chr4.1:85385139-85385158 | MS.gene026765:CDS | 30.0% | |
| ! | ATATATGAAAAGTCTTGTCC+TGG | + | chr4.1:85386324-85386343 | None:intergenic | 30.0% |
| ! | CCTAATTGCCTAATTTTCTA+TGG | - | chr4.1:85386415-85386434 | MS.gene026765:intron | 30.0% |
| ! | TATATGAAAAGTCTTGTCCT+GGG | + | chr4.1:85386323-85386342 | None:intergenic | 30.0% |
| ! | TTCTTTAACTTTGTTTGCAC+TGG | + | chr4.1:85385441-85385460 | None:intergenic | 30.0% |
| !! | GGAATTTCTTAGCTTTGTAA+TGG | - | chr4.1:85386928-85386947 | MS.gene026765:CDS | 30.0% |
| !!! | AACTTTTCTAGTTTCTTCTG+TGG | - | chr4.1:85387012-85387031 | MS.gene026765:CDS | 30.0% |
| !!! | AAGCCCGCTTTTTTTTTTTT+AGG | - | chr4.1:85386627-85386646 | MS.gene026765:CDS | 30.0% |
| !!! | AGATTCTTTTAAGTTTGGAC+GGG | - | chr4.1:85386120-85386139 | MS.gene026765:CDS | 30.0% |
| !!! | CAGATTCTTTTAAGTTTGGA+CGG | - | chr4.1:85386119-85386138 | MS.gene026765:CDS | 30.0% |
| AAACTCTACTACATGAATGC+AGG | + | chr4.1:85385122-85385141 | None:intergenic | 35.0% | |
| ATGATGAATCGGAAACAGTA+GGG | - | chr4.1:85387038-85387057 | MS.gene026765:intron | 35.0% | |
| ATGCTTAGGTATGATGTGAT+TGG | - | chr4.1:85386833-85386852 | MS.gene026765:CDS | 35.0% | |
| CAACGATTCGACTAAAAAAG+TGG | + | chr4.1:85386360-85386379 | None:intergenic | 35.0% | |
| CCAAGCTCAAATTTGTAAAC+TGG | + | chr4.1:85385511-85385530 | None:intergenic | 35.0% | |
| CCAGTTTACAAATTTGAGCT+TGG | - | chr4.1:85385508-85385527 | MS.gene026765:intron | 35.0% | |
| GTTACACCAATTGACGAAAA+TGG | - | chr4.1:85385476-85385495 | MS.gene026765:intron | 35.0% | |
| GTTTGAATTTACGAGAGTGA+TGG | - | chr4.1:85385138-85385157 | MS.gene026765:CDS | 35.0% | |
| TTCTGTGGAAGATGATGAAT+CGG | - | chr4.1:85387027-85387046 | MS.gene026765:CDS | 35.0% | |
| ! | AATTTCTGAGAATAATGGCG+AGG | + | chr4.1:85385317-85385336 | None:intergenic | 35.0% |
| ! | GCATATACTGATTGTGATTG+TGG | + | chr4.1:85386393-85386412 | None:intergenic | 35.0% |
| ! | TCAGCAAATGCTTTTAGTGT+GGG | + | chr4.1:85386046-85386065 | None:intergenic | 35.0% |
| ! | TTCTTTAAGTTTACACCGCT+TGG | + | chr4.1:85386091-85386110 | None:intergenic | 35.0% |
| !! | ACTTGAAAAAGGCACCTAAT+GGG | - | chr4.1:85385612-85385631 | MS.gene026765:intron | 35.0% |
| !! | TTTGCACTGGTGATTTTTGA+GGG | + | chr4.1:85385428-85385447 | None:intergenic | 35.0% |
| ACCCTGAAACTGTATCATTG+CGG | - | chr4.1:85385165-85385184 | MS.gene026765:CDS | 40.0% | |
| ACTCAATTTGACATGCCAAG+CGG | - | chr4.1:85386073-85386092 | MS.gene026765:CDS | 40.0% | |
| ATAGCATTTCAGGAAGACCA+AGG | - | chr4.1:85386200-85386219 | MS.gene026765:intron | 40.0% | |
| CTGTATCATTGCGGGTAAAA+AGG | - | chr4.1:85385174-85385193 | MS.gene026765:CDS | 40.0% | |
| GACGAATTACTGAAGCTTGA+AGG | - | chr4.1:85386962-85386981 | MS.gene026765:CDS | 40.0% | |
| GAGAAGAATCAGCTGCAATT+TGG | - | chr4.1:85385224-85385243 | MS.gene026765:CDS | 40.0% | |
| GATGATGAATCGGAAACAGT+AGG | - | chr4.1:85387037-85387056 | MS.gene026765:intron | 40.0% | |
| GATGTGCCAAATAGCATTTC+AGG | - | chr4.1:85386190-85386209 | MS.gene026765:CDS | 40.0% | |
| GGACAGTCTTCAAGTCTTAA+TGG | - | chr4.1:85386983-85387002 | MS.gene026765:CDS | 40.0% | |
| GGCATTACTAATTTCTCCGA+CGG | - | chr4.1:85385401-85385420 | MS.gene026765:intron | 40.0% | |
| GGTCTTCCTGAAATGCTATT+TGG | + | chr4.1:85386199-85386218 | None:intergenic | 40.0% | |
| GTTGTTGATATATGCAGCAG+AGG | + | chr4.1:85385797-85385816 | None:intergenic | 40.0% | |
| TCCTGCAAAAGCTGAACAAA+AGG | + | chr4.1:85385740-85385759 | None:intergenic | 40.0% | |
| TGGAGGACAACTCCAAAATT+TGG | - | chr4.1:85387126-85387145 | MS.gene026765:intron | 40.0% | |
| TTATGCTACTCCCACTTAGT+GGG | - | chr4.1:85386258-85386277 | MS.gene026765:intron | 40.0% | |
| TTTATGCTACTCCCACTTAG+TGG | - | chr4.1:85386257-85386276 | MS.gene026765:intron | 40.0% | |
| ! | CTCAGCAAATGCTTTTAGTG+TGG | + | chr4.1:85386047-85386066 | None:intergenic | 40.0% |
| ! | GAAATGCTATTTGGCACATC+CGG | + | chr4.1:85386190-85386209 | None:intergenic | 40.0% |
| ! | GCAGTACCATTTTCGTCAAT+TGG | + | chr4.1:85385485-85385504 | None:intergenic | 40.0% |
| ! | TCCTTTTGTTCAGCTTTTGC+AGG | - | chr4.1:85385736-85385755 | MS.gene026765:intron | 40.0% |
| !! | GACTCAAAGCTTTATTCCCT+CGG | - | chr4.1:85387087-85387106 | MS.gene026765:intron | 40.0% |
| !! | GACTTGAAAAAGGCACCTAA+TGG | - | chr4.1:85385611-85385630 | MS.gene026765:intron | 40.0% |
| !! | GTGTTCAAAAATGGTAGTGG+TGG | - | chr4.1:85385560-85385579 | MS.gene026765:intron | 40.0% |
| !! | GTTTGCACTGGTGATTTTTG+AGG | + | chr4.1:85385429-85385448 | None:intergenic | 40.0% |
| !! | TTTGGTGCTTTCGGTGAATT+TGG | + | chr4.1:85385287-85385306 | None:intergenic | 40.0% |
| !!! | TAGGTGCCTTTTTCAAGTCT+TGG | + | chr4.1:85385610-85385629 | None:intergenic | 40.0% |
| AAGAGCTCGTACCATTCCTA+AGG | - | chr4.1:85385763-85385782 | MS.gene026765:intron | 45.0% | |
| ACCCGCAATGATACAGTTTC+AGG | + | chr4.1:85385170-85385189 | None:intergenic | 45.0% | |
| AGCATCTTCTTGCCTGAAAG+TGG | + | chr4.1:85386906-85386925 | None:intergenic | 45.0% | |
| AGGACAGACTACCTTAGGAA+TGG | + | chr4.1:85385777-85385796 | None:intergenic | 45.0% | |
| CAAGTCGTATCCCACTAAGT+GGG | + | chr4.1:85386271-85386290 | None:intergenic | 45.0% | |
| CATTTCAGGAAGACCAAGGT+TGG | - | chr4.1:85386204-85386223 | MS.gene026765:intron | 45.0% | |
| CCCGCAATGATACAGTTTCA+GGG | + | chr4.1:85385169-85385188 | None:intergenic | 45.0% | |
| CCCTGAAACTGTATCATTGC+GGG | - | chr4.1:85385166-85385185 | MS.gene026765:CDS | 45.0% | |
| GCATGCTGTTATGCATGTCA+AGG | - | chr4.1:85385634-85385653 | MS.gene026765:intron | 45.0% | |
| TGCAATGCAGTCACATGCTT+AGG | - | chr4.1:85386819-85386838 | MS.gene026765:CDS | 45.0% | |
| TGCATAACAGCATGCCCATT+AGG | + | chr4.1:85385629-85385648 | None:intergenic | 45.0% | |
| TGCGAGAAATGAAAAGCCTG+TGG | - | chr4.1:85385202-85385221 | MS.gene026765:CDS | 45.0% | |
| TTTCAGGCAAGAAGATGCTC+AGG | - | chr4.1:85386907-85386926 | MS.gene026765:CDS | 45.0% | |
| TTTGAGCTTGGATGCTTCTG+AGG | - | chr4.1:85385520-85385539 | MS.gene026765:intron | 45.0% | |
| !! | CTCGAGGCCTTATTAACTCT+GGG | - | chr4.1:85385666-85385685 | MS.gene026765:intron | 45.0% |
| !! | GGAGCACTATTTGGTGCTTT+CGG | + | chr4.1:85385296-85385315 | None:intergenic | 45.0% |
| !! | TAATGGCGAGGAGCACTATT+TGG | + | chr4.1:85385305-85385324 | None:intergenic | 45.0% |
| AGCAGAGGACAGACTACCTT+AGG | + | chr4.1:85385782-85385801 | None:intergenic | 50.0% | |
| CCAAGTCGTATCCCACTAAG+TGG | + | chr4.1:85386272-85386291 | None:intergenic | 50.0% | |
| CCACTTAGTGGGATACGACT+TGG | - | chr4.1:85386269-85386288 | MS.gene026765:intron | 50.0% | |
| CCAGAGTTAATAAGGCCTCG+AGG | + | chr4.1:85385668-85385687 | None:intergenic | 50.0% | |
| CTTCCTTAGTGCAACAGTGC+AGG | - | chr4.1:85385697-85385716 | MS.gene026765:intron | 50.0% | |
| GTGCTTTCGGTGAATTTGGC+AGG | + | chr4.1:85385283-85385302 | None:intergenic | 50.0% | |
| ! | GAAAAGTCTTGTCCTGGGCA+GGG | + | chr4.1:85386318-85386337 | None:intergenic | 50.0% |
| ! | TGAAAAGTCTTGTCCTGGGC+AGG | + | chr4.1:85386319-85386338 | None:intergenic | 50.0% |
| ! | TGCAGCTGATTCTTCTCCAC+AGG | + | chr4.1:85385221-85385240 | None:intergenic | 50.0% |
| !! | CCTCGAGGCCTTATTAACTC+TGG | - | chr4.1:85385665-85385684 | MS.gene026765:intron | 50.0% |
| !! | GGTGATTTTTGAGGGACCGT+CGG | + | chr4.1:85385420-85385439 | None:intergenic | 50.0% |
| CTTGCCTGAAAGTGGCACGT+TGG | + | chr4.1:85386898-85386917 | None:intergenic | 55.0% | |
| GAGCCTGCACTGTTGCACTA+AGG | + | chr4.1:85385703-85385722 | None:intergenic | 55.0% | |
| GTCAAGGATCTTCAGCCTCG+AGG | - | chr4.1:85385650-85385669 | MS.gene026765:intron | 55.0% | |
| TATGCTACTCTTCCCTGCCC+AGG | - | chr4.1:85386303-85386322 | MS.gene026765:intron | 55.0% | |
| TGCAACAGTGCAGGCTCTCA+TGG | - | chr4.1:85385706-85385725 | MS.gene026765:intron | 55.0% | |
| !! | GGTACCAACGTGCCACTTTC+AGG | - | chr4.1:85386891-85386910 | MS.gene026765:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 85385091 | 85387160 | 85385091 | ID=MS.gene026765 |
| chr4.1 | mRNA | 85385091 | 85387160 | 85385091 | ID=MS.gene026765.t1;Parent=MS.gene026765 |
| chr4.1 | exon | 85387150 | 85387160 | 85387150 | ID=MS.gene026765.t1.exon1;Parent=MS.gene026765.t1 |
| chr4.1 | CDS | 85387150 | 85387160 | 85387150 | ID=cds.MS.gene026765.t1;Parent=MS.gene026765.t1 |
| chr4.1 | exon | 85386467 | 85387055 | 85386467 | ID=MS.gene026765.t1.exon2;Parent=MS.gene026765.t1 |
| chr4.1 | CDS | 85386467 | 85387055 | 85386467 | ID=cds.MS.gene026765.t1;Parent=MS.gene026765.t1 |
| chr4.1 | exon | 85386030 | 85386217 | 85386030 | ID=MS.gene026765.t1.exon3;Parent=MS.gene026765.t1 |
| chr4.1 | CDS | 85386030 | 85386217 | 85386030 | ID=cds.MS.gene026765.t1;Parent=MS.gene026765.t1 |
| chr4.1 | exon | 85385091 | 85385338 | 85385091 | ID=MS.gene026765.t1.exon4;Parent=MS.gene026765.t1 |
| chr4.1 | CDS | 85385091 | 85385338 | 85385091 | ID=cds.MS.gene026765.t1;Parent=MS.gene026765.t1 |
| Gene Sequence |
| Protein sequence |