Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70282.t1 | XP_003630160.2 | 99.3 | 441 | 3 | 0 | 1 | 441 | 1 | 441 | 9.40E-241 | 842.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70282.t1 | Q9FIB6 | 81.0 | 441 | 83 | 1 | 1 | 440 | 1 | 441 | 6.3e-201 | 701.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70282.t1 | B7FLC5 | 99.3 | 441 | 3 | 0 | 1 | 441 | 1 | 441 | 6.8e-241 | 842.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene70282 | 0.899158 | 2.61E-77 | -1.69E-46 |
| MS.gene04918 | MS.gene70282 | 0.813749 | 2.19E-51 | -1.69E-46 |
| MS.gene049208 | MS.gene70282 | 0.810597 | 1.07E-50 | -1.69E-46 |
| MS.gene049254 | MS.gene70282 | 0.822048 | 2.92E-53 | -1.69E-46 |
| MS.gene049283 | MS.gene70282 | 0.836454 | 9.27E-57 | -1.69E-46 |
| MS.gene049350 | MS.gene70282 | 0.842189 | 3.01E-58 | -1.69E-46 |
| MS.gene049368 | MS.gene70282 | 0.870662 | 1.23E-66 | -1.69E-46 |
| MS.gene049499 | MS.gene70282 | 0.830464 | 2.89E-55 | -1.69E-46 |
| MS.gene049711 | MS.gene70282 | 0.811017 | 8.64E-51 | -1.69E-46 |
| MS.gene049786 | MS.gene70282 | 0.809331 | 2.00E-50 | -1.69E-46 |
| MS.gene049807 | MS.gene70282 | 0.801594 | 8.36E-49 | -1.69E-46 |
| MS.gene049983 | MS.gene70282 | 0.851467 | 8.71E-61 | -1.69E-46 |
| MS.gene050114 | MS.gene70282 | 0.807665 | 4.52E-50 | -1.69E-46 |
| MS.gene050213 | MS.gene70282 | 0.806681 | 7.31E-50 | -1.69E-46 |
| MS.gene050359 | MS.gene70282 | 0.80385 | 2.86E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene70282 | 0.837836 | 4.11E-57 | -1.69E-46 |
| MS.gene050551 | MS.gene70282 | 0.832856 | 7.44E-56 | -1.69E-46 |
| MS.gene050559 | MS.gene70282 | 0.803434 | 3.49E-49 | -1.69E-46 |
| MS.gene050561 | MS.gene70282 | 0.806345 | 8.61E-50 | -1.69E-46 |
| MS.gene050646 | MS.gene70282 | 0.811015 | 8.65E-51 | -1.69E-46 |
| MS.gene050654 | MS.gene70282 | 0.846049 | 2.77E-59 | -1.69E-46 |
| MS.gene050689 | MS.gene70282 | 0.809272 | 2.05E-50 | -1.69E-46 |
| MS.gene050838 | MS.gene70282 | 0.816485 | 5.40E-52 | -1.69E-46 |
| MS.gene050941 | MS.gene70282 | 0.806064 | 9.86E-50 | -1.69E-46 |
| MS.gene050945 | MS.gene70282 | 0.809386 | 1.94E-50 | -1.69E-46 |
| MS.gene051003 | MS.gene70282 | 0.851353 | 9.38E-61 | -1.69E-46 |
| MS.gene051102 | MS.gene70282 | 0.803342 | 3.65E-49 | -1.69E-46 |
| MS.gene051234 | MS.gene70282 | 0.850777 | 1.36E-60 | -1.69E-46 |
| MS.gene051247 | MS.gene70282 | 0.810593 | 1.07E-50 | -1.69E-46 |
| MS.gene051332 | MS.gene70282 | 0.804393 | 2.21E-49 | -1.69E-46 |
| MS.gene051343 | MS.gene70282 | 0.847991 | 8.14E-60 | -1.69E-46 |
| MS.gene051363 | MS.gene70282 | 0.800156 | 1.65E-48 | -1.69E-46 |
| MS.gene051365 | MS.gene70282 | 0.80333 | 3.67E-49 | -1.69E-46 |
| MS.gene051490 | MS.gene70282 | 0.822301 | 2.55E-53 | -1.69E-46 |
| MS.gene051676 | MS.gene70282 | 0.839003 | 2.05E-57 | -1.69E-46 |
| MS.gene051700 | MS.gene70282 | 0.818943 | 1.51E-52 | -1.69E-46 |
| MS.gene051744 | MS.gene70282 | 0.843453 | 1.39E-58 | -1.69E-46 |
| MS.gene051848 | MS.gene70282 | -0.822192 | 2.70E-53 | -1.69E-46 |
| MS.gene051852 | MS.gene70282 | 0.803683 | 3.10E-49 | -1.69E-46 |
| MS.gene05188 | MS.gene70282 | 0.843328 | 1.50E-58 | -1.69E-46 |
| MS.gene051975 | MS.gene70282 | 0.891853 | 2.72E-74 | -1.69E-46 |
| MS.gene052016 | MS.gene70282 | 0.801413 | 9.11E-49 | -1.69E-46 |
| MS.gene052052 | MS.gene70282 | 0.807803 | 4.23E-50 | -1.69E-46 |
| MS.gene052072 | MS.gene70282 | 0.818946 | 1.50E-52 | -1.69E-46 |
| MS.gene052168 | MS.gene70282 | 0.804311 | 2.30E-49 | -1.69E-46 |
| MS.gene052307 | MS.gene70282 | 0.854291 | 1.36E-61 | -1.69E-46 |
| MS.gene052342 | MS.gene70282 | 0.810884 | 9.23E-51 | -1.69E-46 |
| MS.gene052434 | MS.gene70282 | 0.845812 | 3.22E-59 | -1.69E-46 |
| MS.gene052463 | MS.gene70282 | 0.854387 | 1.27E-61 | -1.69E-46 |
| MS.gene052516 | MS.gene70282 | 0.804127 | 2.51E-49 | -1.69E-46 |
| MS.gene052518 | MS.gene70282 | 0.816126 | 6.50E-52 | -1.69E-46 |
| MS.gene052533 | MS.gene70282 | 0.842218 | 2.96E-58 | -1.69E-46 |
| MS.gene052584 | MS.gene70282 | 0.800678 | 1.29E-48 | -1.69E-46 |
| MS.gene052609 | MS.gene70282 | 0.874809 | 5.05E-68 | -1.69E-46 |
| MS.gene052773 | MS.gene70282 | 0.817762 | 2.79E-52 | -1.69E-46 |
| MS.gene052775 | MS.gene70282 | 0.827466 | 1.54E-54 | -1.69E-46 |
| MS.gene052776 | MS.gene70282 | 0.823798 | 1.14E-53 | -1.69E-46 |
| MS.gene052855 | MS.gene70282 | 0.822207 | 2.68E-53 | -1.69E-46 |
| MS.gene052889 | MS.gene70282 | 0.824992 | 5.98E-54 | -1.69E-46 |
| MS.gene052932 | MS.gene70282 | 0.831984 | 1.22E-55 | -1.69E-46 |
| MS.gene053058 | MS.gene70282 | 0.859047 | 5.42E-63 | -1.69E-46 |
| MS.gene053079 | MS.gene70282 | 0.838079 | 3.56E-57 | -1.69E-46 |
| MS.gene053143 | MS.gene70282 | 0.827192 | 1.79E-54 | -1.69E-46 |
| MS.gene053226 | MS.gene70282 | 0.843582 | 1.28E-58 | -1.69E-46 |
| MS.gene053298 | MS.gene70282 | 0.811847 | 5.71E-51 | -1.69E-46 |
| MS.gene05350 | MS.gene70282 | 0.813026 | 3.15E-51 | -1.69E-46 |
| MS.gene05364 | MS.gene70282 | 0.809036 | 2.31E-50 | -1.69E-46 |
| MS.gene054139 | MS.gene70282 | 0.809468 | 1.86E-50 | -1.69E-46 |
| MS.gene054479 | MS.gene70282 | 0.848112 | 7.54E-60 | -1.69E-46 |
| MS.gene054576 | MS.gene70282 | 0.815223 | 1.03E-51 | -1.69E-46 |
| MS.gene05458 | MS.gene70282 | 0.837401 | 5.31E-57 | -1.69E-46 |
| MS.gene054892 | MS.gene70282 | 0.837886 | 3.99E-57 | -1.69E-46 |
| MS.gene054893 | MS.gene70282 | 0.840209 | 9.98E-58 | -1.69E-46 |
| MS.gene05517 | MS.gene70282 | 0.847546 | 1.08E-59 | -1.69E-46 |
| MS.gene055310 | MS.gene70282 | 0.816071 | 6.68E-52 | -1.69E-46 |
| MS.gene055311 | MS.gene70282 | 0.861097 | 1.30E-63 | -1.69E-46 |
| MS.gene055313 | MS.gene70282 | 0.878799 | 2.10E-69 | -1.69E-46 |
| MS.gene055314 | MS.gene70282 | 0.836569 | 8.67E-57 | -1.69E-46 |
| MS.gene055386 | MS.gene70282 | 0.810422 | 1.16E-50 | -1.69E-46 |
| MS.gene055469 | MS.gene70282 | 0.811977 | 5.34E-51 | -1.69E-46 |
| MS.gene055513 | MS.gene70282 | 0.90888 | 1.05E-81 | -1.69E-46 |
| MS.gene055603 | MS.gene70282 | 0.820876 | 5.44E-53 | -1.69E-46 |
| MS.gene055864 | MS.gene70282 | 0.888928 | 3.82E-73 | -1.69E-46 |
| MS.gene056045 | MS.gene70282 | 0.860994 | 1.40E-63 | -1.69E-46 |
| MS.gene056174 | MS.gene70282 | 0.81187 | 5.64E-51 | -1.69E-46 |
| MS.gene056181 | MS.gene70282 | 0.867048 | 1.82E-65 | -1.69E-46 |
| MS.gene056215 | MS.gene70282 | 0.820134 | 8.05E-53 | -1.69E-46 |
| MS.gene056308 | MS.gene70282 | 0.831487 | 1.62E-55 | -1.69E-46 |
| MS.gene056390 | MS.gene70282 | 0.8485 | 5.89E-60 | -1.69E-46 |
| MS.gene056403 | MS.gene70282 | 0.863491 | 2.40E-64 | -1.69E-46 |
| MS.gene056507 | MS.gene70282 | 0.811482 | 6.85E-51 | -1.69E-46 |
| MS.gene056509 | MS.gene70282 | 0.816865 | 4.44E-52 | -1.69E-46 |
| MS.gene056605 | MS.gene70282 | 0.839701 | 1.35E-57 | -1.69E-46 |
| MS.gene056638 | MS.gene70282 | 0.807128 | 5.88E-50 | -1.69E-46 |
| MS.gene056699 | MS.gene70282 | 0.865443 | 5.88E-65 | -1.69E-46 |
| MS.gene056776 | MS.gene70282 | 0.800024 | 1.75E-48 | -1.69E-46 |
| MS.gene056787 | MS.gene70282 | 0.827073 | 1.91E-54 | -1.69E-46 |
| MS.gene056831 | MS.gene70282 | 0.820653 | 6.12E-53 | -1.69E-46 |
| MS.gene05686 | MS.gene70282 | 0.829815 | 4.17E-55 | -1.69E-46 |
| MS.gene05689 | MS.gene70282 | 0.825918 | 3.61E-54 | -1.69E-46 |
| MS.gene056901 | MS.gene70282 | 0.806391 | 8.41E-50 | -1.69E-46 |
| MS.gene056986 | MS.gene70282 | 0.867571 | 1.24E-65 | -1.69E-46 |
| MS.gene057034 | MS.gene70282 | 0.861135 | 1.27E-63 | -1.69E-46 |
| MS.gene057102 | MS.gene70282 | 0.85712 | 2.03E-62 | -1.69E-46 |
| MS.gene057155 | MS.gene70282 | 0.810879 | 9.26E-51 | -1.69E-46 |
| MS.gene057208 | MS.gene70282 | 0.825999 | 3.45E-54 | -1.69E-46 |
| MS.gene057360 | MS.gene70282 | 0.858183 | 9.81E-63 | -1.69E-46 |
| MS.gene057598 | MS.gene70282 | 0.800128 | 1.67E-48 | -1.69E-46 |
| MS.gene057693 | MS.gene70282 | 0.801393 | 9.20E-49 | -1.69E-46 |
| MS.gene057855 | MS.gene70282 | 0.803404 | 3.54E-49 | -1.69E-46 |
| MS.gene057915 | MS.gene70282 | 0.842538 | 2.43E-58 | -1.69E-46 |
| MS.gene058081 | MS.gene70282 | 0.826228 | 3.04E-54 | -1.69E-46 |
| MS.gene058095 | MS.gene70282 | 0.82369 | 1.21E-53 | -1.69E-46 |
| MS.gene058159 | MS.gene70282 | 0.835429 | 1.69E-56 | -1.69E-46 |
| MS.gene058279 | MS.gene70282 | 0.801941 | 7.10E-49 | -1.69E-46 |
| MS.gene058289 | MS.gene70282 | 0.845263 | 4.53E-59 | -1.69E-46 |
| MS.gene058292 | MS.gene70282 | 0.838177 | 3.36E-57 | -1.69E-46 |
| MS.gene058355 | MS.gene70282 | 0.82601 | 3.43E-54 | -1.69E-46 |
| MS.gene058639 | MS.gene70282 | 0.809642 | 1.71E-50 | -1.69E-46 |
| MS.gene058668 | MS.gene70282 | 0.839564 | 1.47E-57 | -1.69E-46 |
| MS.gene058758 | MS.gene70282 | 0.808298 | 3.32E-50 | -1.69E-46 |
| MS.gene058976 | MS.gene70282 | 0.814551 | 1.45E-51 | -1.69E-46 |
| MS.gene05897 | MS.gene70282 | 0.829156 | 6.03E-55 | -1.69E-46 |
| MS.gene059144 | MS.gene70282 | 0.826467 | 2.67E-54 | -1.69E-46 |
| MS.gene059146 | MS.gene70282 | 0.853762 | 1.93E-61 | -1.69E-46 |
| MS.gene059170 | MS.gene70282 | 0.819644 | 1.04E-52 | -1.69E-46 |
| MS.gene059227 | MS.gene70282 | 0.823025 | 1.73E-53 | -1.69E-46 |
| MS.gene059283 | MS.gene70282 | 0.820244 | 7.60E-53 | -1.69E-46 |
| MS.gene059439 | MS.gene70282 | 0.819911 | 9.06E-53 | -1.69E-46 |
| MS.gene059570 | MS.gene70282 | 0.824263 | 8.87E-54 | -1.69E-46 |
| MS.gene059725 | MS.gene70282 | 0.825822 | 3.80E-54 | -1.69E-46 |
| MS.gene059774 | MS.gene70282 | 0.801347 | 9.40E-49 | -1.69E-46 |
| MS.gene059778 | MS.gene70282 | 0.816841 | 4.49E-52 | -1.69E-46 |
| MS.gene05985 | MS.gene70282 | -0.862222 | 5.91E-64 | -1.69E-46 |
| MS.gene059901 | MS.gene70282 | -0.82285 | 1.90E-53 | -1.69E-46 |
| MS.gene059965 | MS.gene70282 | 0.840899 | 6.58E-58 | -1.69E-46 |
| MS.gene06010 | MS.gene70282 | 0.82267 | 2.09E-53 | -1.69E-46 |
| MS.gene06011 | MS.gene70282 | 0.813666 | 2.28E-51 | -1.69E-46 |
| MS.gene060191 | MS.gene70282 | 0.824995 | 5.97E-54 | -1.69E-46 |
| MS.gene060296 | MS.gene70282 | 0.817309 | 3.52E-52 | -1.69E-46 |
| MS.gene060365 | MS.gene70282 | 0.815603 | 8.50E-52 | -1.69E-46 |
| MS.gene060435 | MS.gene70282 | 0.835599 | 1.53E-56 | -1.69E-46 |
| MS.gene060527 | MS.gene70282 | 0.800677 | 1.29E-48 | -1.69E-46 |
| MS.gene060637 | MS.gene70282 | 0.809817 | 1.57E-50 | -1.69E-46 |
| MS.gene060697 | MS.gene70282 | 0.800769 | 1.23E-48 | -1.69E-46 |
| MS.gene060763 | MS.gene70282 | 0.809373 | 1.95E-50 | -1.69E-46 |
| MS.gene060777 | MS.gene70282 | 0.829626 | 4.63E-55 | -1.69E-46 |
| MS.gene060932 | MS.gene70282 | 0.826452 | 2.69E-54 | -1.69E-46 |
| MS.gene060933 | MS.gene70282 | 0.862765 | 4.02E-64 | -1.69E-46 |
| MS.gene060935 | MS.gene70282 | 0.85322 | 2.76E-61 | -1.69E-46 |
| MS.gene060937 | MS.gene70282 | 0.869506 | 2.94E-66 | -1.69E-46 |
| MS.gene061006 | MS.gene70282 | 0.805875 | 1.08E-49 | -1.69E-46 |
| MS.gene061100 | MS.gene70282 | 0.847106 | 1.43E-59 | -1.69E-46 |
| MS.gene061160 | MS.gene70282 | 0.826281 | 2.96E-54 | -1.69E-46 |
| MS.gene061188 | MS.gene70282 | 0.848335 | 6.55E-60 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70282.t1 | MTR_8g092450 | 99.320 | 441 | 3 | 0 | 1 | 441 | 1 | 441 | 0.0 | 897 |
| MS.gene70282.t1 | MTR_8g092390 | 97.260 | 438 | 12 | 0 | 4 | 441 | 1 | 438 | 0.0 | 873 |
| MS.gene70282.t1 | MTR_5g072475 | 48.352 | 91 | 47 | 0 | 101 | 191 | 35 | 125 | 2.67e-15 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70282.t1 | AT5G09900 | 81.406 | 441 | 81 | 1 | 1 | 440 | 1 | 441 | 0.0 | 731 |
| MS.gene70282.t1 | AT5G09900 | 80.952 | 441 | 83 | 1 | 1 | 440 | 1 | 441 | 0.0 | 728 |
| MS.gene70282.t1 | AT5G64760 | 78.458 | 441 | 94 | 1 | 1 | 440 | 1 | 441 | 0.0 | 699 |
| MS.gene70282.t1 | AT5G64760 | 78.231 | 441 | 95 | 1 | 1 | 440 | 1 | 441 | 0.0 | 697 |
| MS.gene70282.t1 | AT5G64760 | 79.810 | 421 | 84 | 1 | 21 | 440 | 1 | 421 | 0.0 | 681 |
| MS.gene70282.t1 | AT5G09900 | 78.779 | 344 | 72 | 1 | 1 | 343 | 1 | 344 | 0.0 | 548 |
Find 81 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACCTTCAAAGCTGCTTTA+TGG | 0.134030 | 4.1:+9050883 | None:intergenic |
| AAACAACGATCTGATCATTT+AGG | 0.167639 | 4.1:+9055297 | None:intergenic |
| GACCATATTATCACCTTCTT+TGG | 0.222140 | 4.1:+9053856 | None:intergenic |
| TGAAATTTGCCGCTGCTATA+AGG | 0.251024 | 4.1:-9052007 | MS.gene70282:CDS |
| CATTGCTATCCTTTGCTGTT+TGG | 0.295822 | 4.1:+9050994 | None:intergenic |
| AACAACGATCTGATCATTTA+GGG | 0.304111 | 4.1:+9055298 | None:intergenic |
| CAAGAAACTTGCCAAGATTA+AGG | 0.314974 | 4.1:-9054314 | MS.gene70282:CDS |
| TCTTATCAGGTGGAAACTTT+TGG | 0.318210 | 4.1:-9054133 | MS.gene70282:intron |
| TCATCCAATGGACAGCTCTT+TGG | 0.322854 | 4.1:-9051574 | MS.gene70282:CDS |
| CATCCAATGGACAGCTCTTT+GGG | 0.333432 | 4.1:-9051573 | MS.gene70282:CDS |
| CCCCTGTTCTTCCTTAATCT+TGG | 0.345178 | 4.1:+9054303 | None:intergenic |
| ACCATATTATCACCTTCTTT+GGG | 0.346638 | 4.1:+9053857 | None:intergenic |
| AGGATAACATACTGGAAGTT+TGG | 0.347252 | 4.1:+9051716 | None:intergenic |
| TAACTCATGGGCAGCAAACT+TGG | 0.387347 | 4.1:-9050964 | MS.gene70282:CDS |
| TGCCAAGATTAAGGAAGAAC+AGG | 0.388343 | 4.1:-9054305 | MS.gene70282:CDS |
| TTTATTACGAGCTAATGATT+AGG | 0.390801 | 4.1:-9053787 | MS.gene70282:intron |
| ATTCGACATAGATGCATCTA+AGG | 0.393010 | 4.1:-9053891 | MS.gene70282:CDS |
| TGCAGATGTTCCGTCTCTAC+TGG | 0.400399 | 4.1:-9053822 | MS.gene70282:CDS |
| GCCCAAAGAAGGTGATAATA+TGG | 0.427248 | 4.1:-9053858 | MS.gene70282:CDS |
| TTCAAGATAATCATTGTTGT+GGG | 0.433017 | 4.1:+9052026 | None:intergenic |
| GGTCCATAAAGCAGCTTTGA+AGG | 0.436788 | 4.1:-9050886 | MS.gene70282:CDS |
| TGAGAAGCATCTGTCTGATA+TGG | 0.444884 | 4.1:-9051072 | MS.gene70282:CDS |
| TCAATACGAGTTTCAATATC+CGG | 0.449985 | 4.1:+9054518 | None:intergenic |
| ATGTTGAGATTGAGAGAGCT+AGG | 0.451064 | 4.1:-9054342 | MS.gene70282:CDS |
| GCATCTATGTCGAATACTCT+TGG | 0.459620 | 4.1:+9053899 | None:intergenic |
| TTTCAAGATAATCATTGTTG+TGG | 0.472189 | 4.1:+9052025 | None:intergenic |
| TTCGTTTCTGTAGGCAAACA+TGG | 0.483039 | 4.1:-9055453 | MS.gene70282:intron |
| TATGGTTGTTACCAAGGCTC+TGG | 0.489637 | 4.1:-9051054 | MS.gene70282:CDS |
| TCGATTGTGCCTAGACCGCC+AGG | 0.490883 | 4.1:-9053960 | MS.gene70282:CDS |
| GGAGAAACTGCTTGATCTTG+TGG | 0.501917 | 4.1:-9050943 | MS.gene70282:CDS |
| CAAGGTGGAATTTAAAAGAC+TGG | 0.502902 | 4.1:+9051763 | None:intergenic |
| TTTGACAATGAGATGGCCTC+TGG | 0.504799 | 4.1:-9051533 | MS.gene70282:CDS |
| AATCTTTGCAACCAGAGCCT+TGG | 0.507062 | 4.1:+9051043 | None:intergenic |
| GCAAAGATTGACAGACCAAT+GGG | 0.508334 | 4.1:-9051029 | MS.gene70282:CDS |
| TTGTATCAAAATACTATGCA+AGG | 0.512334 | 4.1:-9051334 | MS.gene70282:CDS |
| GCAATGATGTACTTAACTCA+TGG | 0.517832 | 4.1:-9050977 | MS.gene70282:CDS |
| AGTAGAGACGGAACATCTGC+AGG | 0.517859 | 4.1:+9053824 | None:intergenic |
| ACATTGAACAGTGTATCTGC+TGG | 0.524074 | 4.1:-9054485 | MS.gene70282:CDS |
| GGACATAATCCTGGCGGTCT+AGG | 0.525396 | 4.1:+9053951 | None:intergenic |
| TCTCCCAAAGAGCTGTCCAT+TGG | 0.527502 | 4.1:+9051570 | None:intergenic |
| CAAAGCTGCTTTATGGACCA+TGG | 0.531327 | 4.1:+9050890 | None:intergenic |
| ACGACGCGGTCAGCTCAAGC+AGG | 0.533278 | 4.1:-9055267 | MS.gene70282:intron |
| TTTGTGCACGGACATAATCC+TGG | 0.535226 | 4.1:+9053942 | None:intergenic |
| GTCTGATATGGTTGTTACCA+AGG | 0.537128 | 4.1:-9051060 | MS.gene70282:CDS |
| TGTAACAGCTATGGTACAGC+AGG | 0.546142 | 4.1:-9054564 | MS.gene70282:CDS |
| TGGAAACAGACTATTCCCAT+TGG | 0.557174 | 4.1:+9051014 | None:intergenic |
| TGAGATTGAGAGAGCTAGGT+TGG | 0.557330 | 4.1:-9054338 | MS.gene70282:CDS |
| TTCTTGAGAGTATTTGTGCA+CGG | 0.563823 | 4.1:+9053930 | None:intergenic |
| CATTGAACAGTGTATCTGCT+GGG | 0.568762 | 4.1:-9054484 | MS.gene70282:CDS |
| TGCAAAGATTGACAGACCAA+TGG | 0.572504 | 4.1:-9051030 | MS.gene70282:CDS |
| GAGGAAAATATGTTGGTGCT+TGG | 0.574826 | 4.1:-9051813 | MS.gene70282:CDS |
| GAGAAACAAATGCGTCTCGC+CGG | 0.580321 | 4.1:-9055392 | MS.gene70282:CDS |
| CGTCTCGCCGGCGAAATAGT+CGG | 0.582458 | 4.1:-9055380 | MS.gene70282:CDS |
| ATCACAGGCTGTAACAGCTA+TGG | 0.585065 | 4.1:-9054573 | MS.gene70282:intron |
| CAATGATGTACTTAACTCAT+GGG | 0.587731 | 4.1:-9050976 | MS.gene70282:CDS |
| TCTAGTGCCGACTATTTCGC+CGG | 0.590784 | 4.1:+9055373 | None:intergenic |
| TTTAAAAGACTGGACTGCAT+CGG | 0.598019 | 4.1:+9051773 | None:intergenic |
| TGATTTGATGCAAGAAATTG+CGG | 0.598896 | 4.1:-9054263 | MS.gene70282:intron |
| AGATCCTGAGGAAAATATGT+TGG | 0.600984 | 4.1:-9051820 | MS.gene70282:CDS |
| AGATAGATTTCTATCCTCCA+AGG | 0.603704 | 4.1:+9051745 | None:intergenic |
| TTTGAAGCAGCTGGTCACCA+TGG | 0.604172 | 4.1:-9051600 | MS.gene70282:CDS |
| CATATATTGCCTTATAGCAG+CGG | 0.613022 | 4.1:+9051998 | None:intergenic |
| GCAATATATTGACGAGACAC+CGG | 0.613740 | 4.1:-9054537 | MS.gene70282:CDS |
| AGGTGATAATATGGTCGAAG+AGG | 0.618539 | 4.1:-9053849 | MS.gene70282:CDS |
| GAACGAGTTTGACAATGAGA+TGG | 0.619618 | 4.1:-9051540 | MS.gene70282:CDS |
| TGTTTCAACTCCAGTAGAGA+CGG | 0.623054 | 4.1:+9053812 | None:intergenic |
| CCTACCGGAATAAAATCAGT+AGG | 0.625120 | 4.1:+9051952 | None:intergenic |
| GCCAAGATTAAGGAAGAACA+GGG | 0.626902 | 4.1:-9054304 | MS.gene70282:CDS |
| AATTTCTTGCATCAAATCAG+CGG | 0.629438 | 4.1:+9054267 | None:intergenic |
| TCACCATGGAAGTCATCCAA+TGG | 0.630891 | 4.1:-9051586 | MS.gene70282:CDS |
| GAACAGTGTATCTGCTGGGA+AGG | 0.631990 | 4.1:-9054480 | MS.gene70282:intron |
| AGTCTGTTTCCAAACAGCAA+AGG | 0.634017 | 4.1:-9051003 | MS.gene70282:CDS |
| CTGGACTGCATCGGTGAATG+TGG | 0.634478 | 4.1:+9051782 | None:intergenic |
| TCAAATACACAAGGAAACCA+TGG | 0.640379 | 4.1:-9050907 | MS.gene70282:CDS |
| AGAACAGGGGCTTATAGCTG+AGG | 0.642737 | 4.1:-9054290 | MS.gene70282:CDS |
| TCTTGCATATACAGATCCTG+AGG | 0.670391 | 4.1:-9051832 | MS.gene70282:intron |
| GAGCTGTCATCAAATACACA+AGG | 0.670564 | 4.1:-9050916 | MS.gene70282:CDS |
| TAGATTTCTATCCTCCAAGG+TGG | 0.684299 | 4.1:+9051748 | None:intergenic |
| TGTCCATTGGATGACTTCCA+TGG | 0.689019 | 4.1:+9051583 | None:intergenic |
| CCAAGATTAAGGAAGAACAG+GGG | 0.732046 | 4.1:-9054303 | MS.gene70282:CDS |
| GTGCACGGACATAATCCTGG+CGG | 0.759607 | 4.1:+9053945 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTATTTATTTGTGTTT+GGG | - | chr4.1:9054109-9054128 | MS.gene70282:CDS | 10.0% |
| !! | TAAATTTATTTATTTGTGTT+TGG | - | chr4.1:9054108-9054127 | MS.gene70282:CDS | 10.0% |
| !!! | AAAAAAAATAAAAAAGTGTA+AGG | + | chr4.1:9054998-9055017 | None:intergenic | 10.0% |
| !!! | TAGTTTATTTCTTTTTTAAA+GGG | - | chr4.1:9055302-9055321 | MS.gene70282:CDS | 10.0% |
| !!! | TTAGTTTATTTCTTTTTTAA+AGG | - | chr4.1:9055301-9055320 | MS.gene70282:CDS | 10.0% |
| !!! | TTTGAAAATGATTTAATTTT+TGG | + | chr4.1:9054055-9054074 | None:intergenic | 10.0% |
| !! | AAAAAAGAAATAAACTAAGA+TGG | + | chr4.1:9055299-9055318 | None:intergenic | 15.0% |
| !! | AAAAACAATAAAAATACAGA+AGG | + | chr4.1:9052229-9052248 | None:intergenic | 15.0% |
| !! | AAGTTCATAAAATTACTAAT+AGG | + | chr4.1:9051400-9051419 | None:intergenic | 15.0% |
| !! | AATTATACAACAACAATATA+TGG | + | chr4.1:9051786-9051805 | None:intergenic | 15.0% |
| !! | GTTAATAATTAAAAACTTGT+TGG | + | chr4.1:9053223-9053242 | None:intergenic | 15.0% |
| !!! | AGTTTATTTCTTTTTTAAAG+GGG | - | chr4.1:9055303-9055322 | MS.gene70282:CDS | 15.0% |
| !!! | TTCTGTATTTTTATTGTTTT+TGG | - | chr4.1:9052228-9052247 | MS.gene70282:intron | 15.0% |
| !! | AACTTATATCATTAGTAACA+AGG | + | chr4.1:9053307-9053326 | None:intergenic | 20.0% |
| !! | AATAAGTTGTTTATCCAAAA+AGG | + | chr4.1:9051501-9051520 | None:intergenic | 20.0% |
| !! | AATTCCAAAATTAACAGTAT+AGG | + | chr4.1:9052920-9052939 | None:intergenic | 20.0% |
| !! | ATAAGGAAGAAAAAAAAATC+AGG | + | chr4.1:9054356-9054375 | None:intergenic | 20.0% |
| !! | ATATTTGAACATGATTAGAA+AGG | + | chr4.1:9054761-9054780 | None:intergenic | 20.0% |
| !! | CAAATATAAATAATTGCAGT+CGG | + | chr4.1:9052977-9052996 | None:intergenic | 20.0% |
| !! | TACTATAAGATTCTGTTATA+CGG | - | chr4.1:9054540-9054559 | MS.gene70282:CDS | 20.0% |
| !! | TTTCAATTGTAGATTTCTTA+TGG | - | chr4.1:9051292-9051311 | MS.gene70282:CDS | 20.0% |
| !!! | AAAACATATGTCCTTTAAAA+TGG | + | chr4.1:9052039-9052058 | None:intergenic | 20.0% |
| !!! | AAGTTCAAACTCATTTTATA+TGG | + | chr4.1:9053688-9053707 | None:intergenic | 20.0% |
| !!! | ATTTTGGAATTTGAAAGATA+AGG | - | chr4.1:9052929-9052948 | MS.gene70282:intron | 20.0% |
| !!! | CTGTTAATAACTTTTTCTTA+TGG | - | chr4.1:9055196-9055215 | MS.gene70282:intron | 20.0% |
| !!! | CTTAATTAAGTTTTATCTGT+AGG | - | chr4.1:9051569-9051588 | MS.gene70282:CDS | 20.0% |
| !!! | TTCTAATAAGTTACTGATTT+GGG | - | chr4.1:9052426-9052445 | MS.gene70282:intron | 20.0% |
| !!! | TTTCTAATAAGTTACTGATT+TGG | - | chr4.1:9052425-9052444 | MS.gene70282:intron | 20.0% |
| ! | AACGAAATGAAAAGCAATTA+TGG | + | chr4.1:9050968-9050987 | None:intergenic | 25.0% |
| ! | AAGATTTGATACAAAATCGA+TGG | + | chr4.1:9053511-9053530 | None:intergenic | 25.0% |
| ! | ACACAATACAACATACAAAT+TGG | + | chr4.1:9052063-9052082 | None:intergenic | 25.0% |
| ! | AGATTTGATACAAAATCGAT+GGG | + | chr4.1:9053510-9053529 | None:intergenic | 25.0% |
| ! | AGTAATGTAGAGTAAAGAAT+TGG | - | chr4.1:9054160-9054179 | MS.gene70282:intron | 25.0% |
| ! | CAAAGAAAAAACTATATCCT+TGG | - | chr4.1:9055238-9055257 | MS.gene70282:intron | 25.0% |
| ! | GAGAAGATAATAAAACAGAA+TGG | + | chr4.1:9052004-9052023 | None:intergenic | 25.0% |
| ! | GTATATGCAAGAACAATATT+TGG | + | chr4.1:9054595-9054614 | None:intergenic | 25.0% |
| ! | GTTATCTTGTACTGTATTTA+TGG | - | chr4.1:9053379-9053398 | MS.gene70282:intron | 25.0% |
| ! | TCATTTGAATTATGTGTGAA+GGG | - | chr4.1:9053924-9053943 | MS.gene70282:CDS | 25.0% |
| ! | TCTTCTACGTTAAATTGTTT+AGG | - | chr4.1:9052451-9052470 | MS.gene70282:intron | 25.0% |
| ! | TGGAATTGGAAAGAAAATAA+GGG | + | chr4.1:9053566-9053585 | None:intergenic | 25.0% |
| ! | TTATGCAAGAGTAATTGATT+AGG | + | chr4.1:9055333-9055352 | None:intergenic | 25.0% |
| ! | TTCAAGATAATCATTGTTGT+GGG | + | chr4.1:9054412-9054431 | None:intergenic | 25.0% |
| ! | TTCATTTGAATTATGTGTGA+AGG | - | chr4.1:9053923-9053942 | MS.gene70282:CDS | 25.0% |
| ! | TTGGAATTGGAAAGAAAATA+AGG | + | chr4.1:9053567-9053586 | None:intergenic | 25.0% |
| ! | TTGTATCAAAATACTATGCA+AGG | - | chr4.1:9055101-9055120 | MS.gene70282:intron | 25.0% |
| ! | TTTATTACGAGCTAATGATT+AGG | - | chr4.1:9052648-9052667 | MS.gene70282:intron | 25.0% |
| ! | TTTCAAGATAATCATTGTTG+TGG | + | chr4.1:9054413-9054432 | None:intergenic | 25.0% |
| ! | TTTCAGAATAGTTAAGAACT+GGG | + | chr4.1:9053642-9053661 | None:intergenic | 25.0% |
| !! | ATAAATTTTGTGAGACTGTA+TGG | + | chr4.1:9051726-9051745 | None:intergenic | 25.0% |
| !! | ATCCTTTTTATCTATATCTG+TGG | - | chr4.1:9053113-9053132 | MS.gene70282:intron | 25.0% |
| !! | ATGTCCTATACTGTTAATTT+TGG | - | chr4.1:9052913-9052932 | MS.gene70282:intron | 25.0% |
| !! | ATTTTTCACAACAGTATCAA+TGG | + | chr4.1:9053773-9053792 | None:intergenic | 25.0% |
| !! | CTTAGCATTATCCATTTTAA+AGG | - | chr4.1:9052025-9052044 | MS.gene70282:CDS | 25.0% |
| !! | TAAATTTTGTGAGACTGTAT+GGG | + | chr4.1:9051725-9051744 | None:intergenic | 25.0% |
| !! | TCCTTTTTATCTATATCTGT+GGG | - | chr4.1:9053114-9053133 | MS.gene70282:intron | 25.0% |
| !!! | AAATCCTACTGATTTTATTC+CGG | - | chr4.1:9054479-9054498 | MS.gene70282:intron | 25.0% |
| !!! | AACTTTGGAAATTTTGGAAT+TGG | + | chr4.1:9053580-9053599 | None:intergenic | 25.0% |
| !!! | GTTTTATTTAATCGATTGGT+AGG | - | chr4.1:9051230-9051249 | MS.gene70282:intron | 25.0% |
| !!! | TATTCTGAAACAAAGCATTA+TGG | - | chr4.1:9053652-9053671 | MS.gene70282:intron | 25.0% |
| !!! | TGTTTTAATTCTTAGCTTGA+TGG | - | chr4.1:9053243-9053262 | MS.gene70282:intron | 25.0% |
| !!! | TTGGGTTTTATTTAATCGAT+TGG | - | chr4.1:9051226-9051245 | MS.gene70282:intron | 25.0% |
| !!! | TTTTTTTTTCTTCCTTATGC+TGG | - | chr4.1:9054358-9054377 | MS.gene70282:intron | 25.0% |
| AAACAACGATCTGATCATTT+AGG | + | chr4.1:9051141-9051160 | None:intergenic | 30.0% | |
| AACAACGATCTGATCATTTA+GGG | + | chr4.1:9051140-9051159 | None:intergenic | 30.0% | |
| AAGAAATACTACAACGAAAC+AGG | + | chr4.1:9052691-9052710 | None:intergenic | 30.0% | |
| AATTTCTTGCATCAAATCAG+CGG | + | chr4.1:9052171-9052190 | None:intergenic | 30.0% | |
| AATTTGAGTAAACACAAGCA+AGG | + | chr4.1:9053038-9053057 | None:intergenic | 30.0% | |
| ACCATATTATCACCTTCTTT+GGG | + | chr4.1:9052581-9052600 | None:intergenic | 30.0% | |
| AGCAGCATAAATATAAACGA+CGG | + | chr4.1:9053887-9053906 | None:intergenic | 30.0% | |
| AGTAAGAAATATCATGAACC+AGG | + | chr4.1:9054327-9054346 | None:intergenic | 30.0% | |
| AGTATCAATGGTAAAAGACA+AGG | + | chr4.1:9053761-9053780 | None:intergenic | 30.0% | |
| ATGTAATGTGCAATCTTATC+AGG | - | chr4.1:9052289-9052308 | MS.gene70282:intron | 30.0% | |
| CAATGATGTACTTAACTCAT+GGG | - | chr4.1:9055459-9055478 | MS.gene70282:intron | 30.0% | |
| CAATTACTCTTGCATAATTC+AGG | - | chr4.1:9055336-9055355 | MS.gene70282:CDS | 30.0% | |
| CACACATAATTCAAATGAAC+AGG | + | chr4.1:9053922-9053941 | None:intergenic | 30.0% | |
| CCTAAGAAACTTAGATCATT+AGG | + | chr4.1:9053357-9053376 | None:intergenic | 30.0% | |
| CCTAATGATCTAAGTTTCTT+AGG | - | chr4.1:9053354-9053373 | MS.gene70282:intron | 30.0% | |
| GTTTCAGAATAGTTAAGAAC+TGG | + | chr4.1:9053643-9053662 | None:intergenic | 30.0% | |
| TCAATACGAGTTTCAATATC+CGG | + | chr4.1:9051920-9051939 | None:intergenic | 30.0% | |
| TCCCACAGATATAGATAAAA+AGG | + | chr4.1:9053118-9053137 | None:intergenic | 30.0% | |
| TGAAAGATAGGATAACATAC+TGG | + | chr4.1:9054730-9054749 | None:intergenic | 30.0% | |
| TGATTTGATGCAAGAAATTG+CGG | - | chr4.1:9052172-9052191 | MS.gene70282:intron | 30.0% | |
| TTAAATAAGCCAATCCAAAC+AGG | - | chr4.1:9051760-9051779 | MS.gene70282:CDS | 30.0% | |
| TTAATCGATTGGTAGGTTTA+GGG | - | chr4.1:9051237-9051256 | MS.gene70282:intron | 30.0% | |
| TTAGTGATGACAGAAATAGT+AGG | - | chr4.1:9052386-9052405 | MS.gene70282:intron | 30.0% | |
| TTTAATCGATTGGTAGGTTT+AGG | - | chr4.1:9051236-9051255 | MS.gene70282:intron | 30.0% | |
| ! | AAATTGATGCGTTTTGTGTT+AGG | - | chr4.1:9051201-9051220 | MS.gene70282:intron | 30.0% |
| ! | AATTGATGCGTTTTGTGTTA+GGG | - | chr4.1:9051202-9051221 | MS.gene70282:intron | 30.0% |
| ! | ATCAGTAGGATTTTCTTTGA+TGG | + | chr4.1:9054472-9054491 | None:intergenic | 30.0% |
| ! | GTGAGAATCGTGATATTTTA+CGG | - | chr4.1:9051816-9051835 | MS.gene70282:CDS | 30.0% |
| ! | GTGTAGTTAGAAAGAGTTTT+GGG | - | chr4.1:9051332-9051351 | MS.gene70282:CDS | 30.0% |
| ! | TACAACAAGAATGTTCTGAA+AGG | + | chr4.1:9055086-9055105 | None:intergenic | 30.0% |
| ! | TATTTATGGATTGCTAGAGT+TGG | - | chr4.1:9053393-9053412 | MS.gene70282:intron | 30.0% |
| ! | TGTGTAGTTAGAAAGAGTTT+TGG | - | chr4.1:9051331-9051350 | MS.gene70282:CDS | 30.0% |
| ! | TGTTTAGAATTCCTTGTCAT+TGG | - | chr4.1:9054783-9054802 | MS.gene70282:intron | 30.0% |
| !! | AACTTTTTCTTATGGTGTGT+GGG | - | chr4.1:9055204-9055223 | MS.gene70282:intron | 30.0% |
| !! | AATTGTTGTTTGTCTACTGT+TGG | - | chr4.1:9054001-9054020 | MS.gene70282:intron | 30.0% |
| !! | AGGGATAACTTTGGAAATTT+TGG | + | chr4.1:9053586-9053605 | None:intergenic | 30.0% |
| !! | CTACATATTTTTCTAGTACC+TGG | - | chr4.1:9054306-9054325 | MS.gene70282:CDS | 30.0% |
| !! | CTATGATTTGTTTCTATGCT+TGG | - | chr4.1:9053138-9053157 | MS.gene70282:intron | 30.0% |
| !! | GTTGTTTTCATATGCTATCT+TGG | - | chr4.1:9051634-9051653 | MS.gene70282:intron | 30.0% |
| !! | TAACTTTTTCTTATGGTGTG+TGG | - | chr4.1:9055203-9055222 | MS.gene70282:intron | 30.0% |
| !! | TGTCATAAGCTGTTTTCATA+AGG | - | chr4.1:9051696-9051715 | MS.gene70282:intron | 30.0% |
| !! | TTCAGTTTCATTCACTTTTG+AGG | - | chr4.1:9052829-9052848 | MS.gene70282:intron | 30.0% |
| !! | TTCATTCACTTTTGAGGATA+TGG | - | chr4.1:9052835-9052854 | MS.gene70282:intron | 30.0% |
| !!! | TACGTTGTTTTAGACTTCAA+AGG | - | chr4.1:9051357-9051376 | MS.gene70282:intron | 30.0% |
| AAAACATGTTGCAAGAGTGA+AGG | + | chr4.1:9054030-9054049 | None:intergenic | 35.0% | |
| AAAGAGAATAGAAAGCCTAC+CGG | + | chr4.1:9054501-9054520 | None:intergenic | 35.0% | |
| AACCCAAGTTTAGAAAGCTA+TGG | + | chr4.1:9054217-9054236 | None:intergenic | 35.0% | |
| AAGGAATCCAAATGTTAGGA+AGG | + | chr4.1:9053742-9053761 | None:intergenic | 35.0% | |
| AAGGATGAGAGATGAAAGAT+AGG | + | chr4.1:9054742-9054761 | None:intergenic | 35.0% | |
| AATATATGGCCTGTTTGGAT+TGG | + | chr4.1:9051772-9051791 | None:intergenic | 35.0% | |
| ACAACAATATATGGCCTGTT+TGG | + | chr4.1:9051777-9051796 | None:intergenic | 35.0% | |
| ACCCAAGTTTAGAAAGCTAT+GGG | + | chr4.1:9054216-9054235 | None:intergenic | 35.0% | |
| ACTGTTCAGTTCAGATACTA+TGG | - | chr4.1:9051474-9051493 | MS.gene70282:intron | 35.0% | |
| AGACAAGGAATCCAAATGTT+AGG | + | chr4.1:9053746-9053765 | None:intergenic | 35.0% | |
| AGATAGATTTCTATCCTCCA+AGG | + | chr4.1:9054693-9054712 | None:intergenic | 35.0% | |
| AGATCCTGAGGAAAATATGT+TGG | - | chr4.1:9054615-9054634 | MS.gene70282:intron | 35.0% | |
| AGATGAAAAGTAGGGATGAA+AGG | + | chr4.1:9053606-9053625 | None:intergenic | 35.0% | |
| AGCAGACAAAGATGAAAAGT+AGG | + | chr4.1:9053615-9053634 | None:intergenic | 35.0% | |
| AGCCTACTATATACTATCAC+AGG | - | chr4.1:9051847-9051866 | MS.gene70282:intron | 35.0% | |
| AGCCTGTGATAGTATATAGT+AGG | + | chr4.1:9051852-9051871 | None:intergenic | 35.0% | |
| AGGATAACATACTGGAAGTT+TGG | + | chr4.1:9054722-9054741 | None:intergenic | 35.0% | |
| ATTCGACATAGATGCATCTA+AGG | - | chr4.1:9052544-9052563 | MS.gene70282:intron | 35.0% | |
| CAAGAAACTTGCCAAGATTA+AGG | - | chr4.1:9052121-9052140 | MS.gene70282:intron | 35.0% | |
| CAAGGTGGAATTTAAAAGAC+TGG | + | chr4.1:9054675-9054694 | None:intergenic | 35.0% | |
| CATATATTGCCTTATAGCAG+CGG | + | chr4.1:9054440-9054459 | None:intergenic | 35.0% | |
| GAAAAGAAAAAGCCCAAAGA+AGG | - | chr4.1:9052566-9052585 | MS.gene70282:intron | 35.0% | |
| GACATTAATGCATCACTGTT+AGG | + | chr4.1:9052898-9052917 | None:intergenic | 35.0% | |
| GACCATATTATCACCTTCTT+TGG | + | chr4.1:9052582-9052601 | None:intergenic | 35.0% | |
| GATGAAAAGTAGGGATGAAA+GGG | + | chr4.1:9053605-9053624 | None:intergenic | 35.0% | |
| GCAATGATGTACTTAACTCA+TGG | - | chr4.1:9055458-9055477 | MS.gene70282:intron | 35.0% | |
| GCAGACAAAGATGAAAAGTA+GGG | + | chr4.1:9053614-9053633 | None:intergenic | 35.0% | |
| GTAGATACTCTAAATTGTCC+TGG | - | chr4.1:9052795-9052814 | MS.gene70282:intron | 35.0% | |
| TAATGTGCAATCTTATCAGG+TGG | - | chr4.1:9052292-9052311 | MS.gene70282:intron | 35.0% | |
| TCAAATACACAAGGAAACCA+TGG | - | chr4.1:9055528-9055547 | MS.gene70282:intron | 35.0% | |
| TTCACTCAAAAACTTTCCAG+AGG | + | chr4.1:9054921-9054940 | None:intergenic | 35.0% | |
| TTTAAAAGACTGGACTGCAT+CGG | + | chr4.1:9054665-9054684 | None:intergenic | 35.0% | |
| ! | AAACCTTCAAAGCTGCTTTA+TGG | + | chr4.1:9055555-9055574 | None:intergenic | 35.0% |
| ! | ACTTGTAGTTACAAGTACTG+TGG | - | chr4.1:9052720-9052739 | MS.gene70282:intron | 35.0% |
| ! | ATATCCTTGGAAAGTGTATG+TGG | - | chr4.1:9055251-9055270 | MS.gene70282:intron | 35.0% |
| ! | CAGTCTTTTAAATTCCACCT+TGG | - | chr4.1:9054673-9054692 | MS.gene70282:intron | 35.0% |
| ! | GCTTTTCATTTCGTTTCTGT+AGG | - | chr4.1:9050973-9050992 | MS.gene70282:CDS | 35.0% |
| ! | GGTTTTCTGTCTGTGATTTT+AGG | - | chr4.1:9054379-9054398 | MS.gene70282:intron | 35.0% |
| ! | GTAGGATTTTCTTTGATGGA+CGG | + | chr4.1:9054468-9054487 | None:intergenic | 35.0% |
| ! | TCAGATACTATGGTCCTTTT+TGG | - | chr4.1:9051484-9051503 | MS.gene70282:CDS | 35.0% |
| ! | TCTTATCAGGTGGAAACTTT+TGG | - | chr4.1:9052302-9052321 | MS.gene70282:intron | 35.0% |
| ! | TCTTTTAAATTCCACCTTGG+AGG | - | chr4.1:9054676-9054695 | MS.gene70282:intron | 35.0% |
| ! | TTTGGTTCGCTTGAAACTAT+CGG | - | chr4.1:9051261-9051280 | MS.gene70282:intron | 35.0% |
| !! | AAGCAGCTTTGAAGGTTTAA+TGG | - | chr4.1:9055557-9055576 | MS.gene70282:intron | 35.0% |
| !! | ACTTTTTCTTATGGTGTGTG+GGG | - | chr4.1:9055205-9055224 | MS.gene70282:intron | 35.0% |
| !! | ATTTAGGGTTTTCCATGCTT+TGG | + | chr4.1:9051125-9051144 | None:intergenic | 35.0% |
| !! | TTCTTGAGAGTATTTGTGCA+CGG | + | chr4.1:9052508-9052527 | None:intergenic | 35.0% |
| !! | TTGTTTCTATGCTTGGCATT+TGG | - | chr4.1:9053145-9053164 | MS.gene70282:intron | 35.0% |
| !!! | TGAGGATATGGTTTTGATGT+TGG | - | chr4.1:9052847-9052866 | MS.gene70282:intron | 35.0% |
| AAAGTGCACAATTACAGTGC+AGG | + | chr4.1:9053474-9053493 | None:intergenic | 40.0% | |
| AACAGGTACAACCAATGACA+AGG | + | chr4.1:9054797-9054816 | None:intergenic | 40.0% | |
| AACTGAAAACGCAGAAAACC+AGG | + | chr4.1:9052816-9052835 | None:intergenic | 40.0% | |
| ACAAAACTCCTGTCATGACA+AGG | - | chr4.1:9053959-9053978 | MS.gene70282:CDS | 40.0% | |
| ACAGACAGAAAACCAGCATA+AGG | + | chr4.1:9054373-9054392 | None:intergenic | 40.0% | |
| ACATTGAACAGTGTATCTGC+TGG | - | chr4.1:9051950-9051969 | MS.gene70282:intron | 40.0% | |
| AGGGATGAAAGGGATAACTT+TGG | + | chr4.1:9053595-9053614 | None:intergenic | 40.0% | |
| AGGTGATAATATGGTCGAAG+AGG | - | chr4.1:9052586-9052605 | MS.gene70282:intron | 40.0% | |
| AGTCTGTTTCCAAACAGCAA+AGG | - | chr4.1:9055432-9055451 | MS.gene70282:CDS | 40.0% | |
| ATGTTGAGATTGAGAGAGCT+AGG | - | chr4.1:9052093-9052112 | MS.gene70282:intron | 40.0% | |
| CATTGAACAGTGTATCTGCT+GGG | - | chr4.1:9051951-9051970 | MS.gene70282:intron | 40.0% | |
| CCAAGATTAAGGAAGAACAG+GGG | - | chr4.1:9052132-9052151 | MS.gene70282:intron | 40.0% | |
| CCCAAGTTTAGAAAGCTATG+GGG | + | chr4.1:9054215-9054234 | None:intergenic | 40.0% | |
| CCCCATAGCTTTCTAAACTT+GGG | - | chr4.1:9054212-9054231 | MS.gene70282:intron | 40.0% | |
| CCTACCGGAATAAAATCAGT+AGG | + | chr4.1:9054486-9054505 | None:intergenic | 40.0% | |
| GAACGAGTTTGACAATGAGA+TGG | - | chr4.1:9054895-9054914 | MS.gene70282:intron | 40.0% | |
| GAGCTGTCATCAAATACACA+AGG | - | chr4.1:9055519-9055538 | MS.gene70282:intron | 40.0% | |
| GAGGTGTGTAATGCTAGTAA+TGG | - | chr4.1:9055166-9055185 | MS.gene70282:intron | 40.0% | |
| GAGTAAAGAATTGGTCACAG+TGG | - | chr4.1:9054169-9054188 | MS.gene70282:intron | 40.0% | |
| GCAAAGATTGACAGACCAAT+GGG | - | chr4.1:9055406-9055425 | MS.gene70282:CDS | 40.0% | |
| GCAATATATTGACGAGACAC+CGG | - | chr4.1:9051898-9051917 | MS.gene70282:intron | 40.0% | |
| GCATCTATGTCGAATACTCT+TGG | + | chr4.1:9052539-9052558 | None:intergenic | 40.0% | |
| GCCAAGATTAAGGAAGAACA+GGG | - | chr4.1:9052131-9052150 | MS.gene70282:intron | 40.0% | |
| GCCCAAAGAAGGTGATAATA+TGG | - | chr4.1:9052577-9052596 | MS.gene70282:intron | 40.0% | |
| GTCATGACAAGGTTTAGGAA+AGG | - | chr4.1:9053970-9053989 | MS.gene70282:intron | 40.0% | |
| GTCTGATATGGTTGTTACCA+AGG | - | chr4.1:9055375-9055394 | MS.gene70282:CDS | 40.0% | |
| TACTAGCATTACACACCTCT+AGG | + | chr4.1:9055165-9055184 | None:intergenic | 40.0% | |
| TAGATTTCTATCCTCCAAGG+TGG | + | chr4.1:9054690-9054709 | None:intergenic | 40.0% | |
| TCCCCATAGCTTTCTAAACT+TGG | - | chr4.1:9054211-9054230 | MS.gene70282:intron | 40.0% | |
| TCTTGCATATACAGATCCTG+AGG | - | chr4.1:9054603-9054622 | MS.gene70282:intron | 40.0% | |
| TGAAATTTGCCGCTGCTATA+AGG | - | chr4.1:9054428-9054447 | MS.gene70282:intron | 40.0% | |
| TGCAAAGATTGACAGACCAA+TGG | - | chr4.1:9055405-9055424 | MS.gene70282:CDS | 40.0% | |
| TGCCAAGATTAAGGAAGAAC+AGG | - | chr4.1:9052130-9052149 | MS.gene70282:intron | 40.0% | |
| TGGAAACAGACTATTCCCAT+TGG | + | chr4.1:9055424-9055443 | None:intergenic | 40.0% | |
| TGGTCATCCTTCCTAACATT+TGG | - | chr4.1:9053732-9053751 | MS.gene70282:intron | 40.0% | |
| TGTTTCAACTCCAGTAGAGA+CGG | + | chr4.1:9052626-9052645 | None:intergenic | 40.0% | |
| TTCCTAAACCTTGTCATGAC+AGG | + | chr4.1:9053970-9053989 | None:intergenic | 40.0% | |
| TTCGTTTCTGTAGGCAAACA+TGG | - | chr4.1:9050982-9051001 | MS.gene70282:CDS | 40.0% | |
| ! | AGCACCAACATATTTTCCTC+AGG | + | chr4.1:9054622-9054641 | None:intergenic | 40.0% |
| ! | ATGCGTTTTGTGTTAGGGTT+TGG | - | chr4.1:9051207-9051226 | MS.gene70282:intron | 40.0% |
| ! | CTTCGATCGATTCTCTTTCA+TGG | - | chr4.1:9050889-9050908 | MS.gene70282:CDS | 40.0% |
| ! | CTTGGAAAGTGTATGTGGTA+GGG | - | chr4.1:9055256-9055275 | MS.gene70282:intron | 40.0% |
| ! | GAGGAAAATATGTTGGTGCT+TGG | - | chr4.1:9054622-9054641 | MS.gene70282:intron | 40.0% |
| ! | GCACTGTAATTGTGCACTTT+TGG | - | chr4.1:9053474-9053493 | MS.gene70282:intron | 40.0% |
| ! | TGCGTTTTGTGTTAGGGTTT+GGG | - | chr4.1:9051208-9051227 | MS.gene70282:intron | 40.0% |
| ! | TTATGGATTGCTAGAGTTGG+TGG | - | chr4.1:9053396-9053415 | MS.gene70282:intron | 40.0% |
| ! | TTGGAAAGTGTATGTGGTAG+GGG | - | chr4.1:9055257-9055276 | MS.gene70282:intron | 40.0% |
| ! | TTTAGAGCTGTCAAACTCTC+TGG | - | chr4.1:9053706-9053725 | MS.gene70282:intron | 40.0% |
| !! | CATTGCTATCCTTTGCTGTT+TGG | + | chr4.1:9055444-9055463 | None:intergenic | 40.0% |
| !! | GATTGGTAGGTTTAGGGTTT+TGG | - | chr4.1:9051243-9051262 | MS.gene70282:intron | 40.0% |
| !! | GTTGTTTTGTCTAAACGACG+CGG | - | chr4.1:9051154-9051173 | MS.gene70282:intron | 40.0% |
| !! | TGAGAAGCATCTGTCTGATA+TGG | - | chr4.1:9055363-9055382 | MS.gene70282:CDS | 40.0% |
| !!! | CCTACTGATTTTATTCCGGT+AGG | - | chr4.1:9054483-9054502 | MS.gene70282:CDS | 40.0% |
| !!! | TCTGTTTTGAAGCCAAAGCA+TGG | - | chr4.1:9051110-9051129 | MS.gene70282:intron | 40.0% |
| AATCTTTGCAACCAGAGCCT+TGG | + | chr4.1:9055395-9055414 | None:intergenic | 45.0% | |
| ATCACAGGCTGTAACAGCTA+TGG | - | chr4.1:9051862-9051881 | MS.gene70282:intron | 45.0% | |
| ATTATGTGTGAAGGGCAACC+AGG | - | chr4.1:9053932-9053951 | MS.gene70282:CDS | 45.0% | |
| CCCCTGTTCTTCCTTAATCT+TGG | + | chr4.1:9052135-9052154 | None:intergenic | 45.0% | |
| CCTACCACATACACTTTCCA+AGG | + | chr4.1:9055258-9055277 | None:intergenic | 45.0% | |
| CGATTTCACAGTCAGTGAAG+TGG | + | chr4.1:9054252-9054271 | None:intergenic | 45.0% | |
| CTCCTGTCATGACAAGGTTT+AGG | - | chr4.1:9053965-9053984 | MS.gene70282:CDS | 45.0% | |
| GCTGTCAAACTCTCTGGTTA+TGG | - | chr4.1:9053712-9053731 | MS.gene70282:intron | 45.0% | |
| GGAGAAACTGCTTGATCTTG+TGG | - | chr4.1:9055492-9055511 | MS.gene70282:intron | 45.0% | |
| GGCGTGAGATTAACAGTGAA+GGG | + | chr4.1:9050947-9050966 | None:intergenic | 45.0% | |
| TAACTCATGGGCAGCAAACT+TGG | - | chr4.1:9055471-9055490 | MS.gene70282:intron | 45.0% | |
| TATGGTTGTTACCAAGGCTC+TGG | - | chr4.1:9055381-9055400 | MS.gene70282:CDS | 45.0% | |
| TCACCATGGAAGTCATCCAA+TGG | - | chr4.1:9054849-9054868 | MS.gene70282:intron | 45.0% | |
| TGAGATTGAGAGAGCTAGGT+TGG | - | chr4.1:9052097-9052116 | MS.gene70282:intron | 45.0% | |
| TGGCGTGAGATTAACAGTGA+AGG | + | chr4.1:9050948-9050967 | None:intergenic | 45.0% | |
| TGGTCACAGTGGAGTATATG+TGG | - | chr4.1:9054180-9054199 | MS.gene70282:intron | 45.0% | |
| TGGTTCCAAAGACGAAAGTG+CGG | - | chr4.1:9053165-9053184 | MS.gene70282:intron | 45.0% | |
| TGTAACAGCTATGGTACAGC+AGG | - | chr4.1:9051871-9051890 | MS.gene70282:intron | 45.0% | |
| TGTACCTGTTACACGTGTCT+AGG | - | chr4.1:9054807-9054826 | MS.gene70282:intron | 45.0% | |
| TGTATGTGGTAGGGGAATTG+TGG | - | chr4.1:9055265-9055284 | MS.gene70282:intron | 45.0% | |
| TGTCCATTGGATGACTTCCA+TGG | + | chr4.1:9054855-9054874 | None:intergenic | 45.0% | |
| TTTGACAATGAGATGGCCTC+TGG | - | chr4.1:9054902-9054921 | MS.gene70282:intron | 45.0% | |
| TTTGTGCACGGACATAATCC+TGG | + | chr4.1:9052496-9052515 | None:intergenic | 45.0% | |
| ! | CAAAGCTGCTTTATGGACCA+TGG | + | chr4.1:9055548-9055567 | None:intergenic | 45.0% |
| ! | CCTTGGAAAGTGTATGTGGT+AGG | - | chr4.1:9055255-9055274 | MS.gene70282:intron | 45.0% |
| ! | CGGATTGGAGTACATGTTTG+TGG | - | chr4.1:9053185-9053204 | MS.gene70282:intron | 45.0% |
| ! | GGTCCATAAAGCAGCTTTGA+AGG | - | chr4.1:9055549-9055568 | MS.gene70282:intron | 45.0% |
| !! | GGTGGAAACTTTTGGTGCAA+TGG | - | chr4.1:9052310-9052329 | MS.gene70282:intron | 45.0% |
| !!! | TAGGCTACTTTTGAAGCAGC+TGG | - | chr4.1:9054826-9054845 | MS.gene70282:intron | 45.0% |
| AGAACAGGGGCTTATAGCTG+AGG | - | chr4.1:9052145-9052164 | MS.gene70282:intron | 50.0% | |
| AGTAGAGACGGAACATCTGC+AGG | + | chr4.1:9052614-9052633 | None:intergenic | 50.0% | |
| CCAATCCGCACTTTCGTCTT+TGG | + | chr4.1:9053173-9053192 | None:intergenic | 50.0% | |
| GAACAGTGTATCTGCTGGGA+AGG | - | chr4.1:9051955-9051974 | MS.gene70282:intron | 50.0% | |
| GAGAAACAAATGCGTCTCGC+CGG | - | chr4.1:9051043-9051062 | MS.gene70282:CDS | 50.0% | |
| GTAGCCTAGACACGTGTAAC+AGG | + | chr4.1:9054814-9054833 | None:intergenic | 50.0% | |
| TGCAGATGTTCCGTCTCTAC+TGG | - | chr4.1:9052613-9052632 | MS.gene70282:intron | 50.0% | |
| ! | CCAAAGACGAAAGTGCGGAT+TGG | - | chr4.1:9053170-9053189 | MS.gene70282:intron | 50.0% |
| ! | GCTTTTGTGTCTCAGCCTAG+AGG | - | chr4.1:9055147-9055166 | MS.gene70282:intron | 50.0% |
| ! | TTTGAAGCAGCTGGTCACCA+TGG | - | chr4.1:9054835-9054854 | MS.gene70282:intron | 50.0% |
| !! | TCTAGTGCCGACTATTTCGC+CGG | + | chr4.1:9051065-9051084 | None:intergenic | 50.0% |
| GCAGTCGGACAGACAGTCAT+TGG | + | chr4.1:9052962-9052981 | None:intergenic | 55.0% | |
| GGACATAATCCTGGCGGTCT+AGG | + | chr4.1:9052487-9052506 | None:intergenic | 55.0% | |
| GTGCACGGACATAATCCTGG+CGG | + | chr4.1:9052493-9052512 | None:intergenic | 55.0% | |
| ! | CTGGACTGCATCGGTGAATG+TGG | + | chr4.1:9054656-9054675 | None:intergenic | 55.0% |
| !! | GACAGGAGTTTTGTAGCGCC+TGG | + | chr4.1:9053953-9053972 | None:intergenic | 55.0% |
| CGTCTCGCCGGCGAAATAGT+CGG | - | chr4.1:9051055-9051074 | MS.gene70282:CDS | 60.0% | |
| TCGATTGTGCCTAGACCGCC+AGG | - | chr4.1:9052475-9052494 | MS.gene70282:intron | 60.0% | |
| ACGACGCGGTCAGCTCAAGC+AGG | - | chr4.1:9051168-9051187 | MS.gene70282:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 9050881 | 9055576 | 9050881 | ID=MS.gene70282 |
| chr4.1 | mRNA | 9050881 | 9055576 | 9050881 | ID=MS.gene70282.t1;Parent=MS.gene70282 |
| chr4.1 | exon | 9055574 | 9055576 | 9055574 | ID=MS.gene70282.t1.exon1;Parent=MS.gene70282.t1 |
| chr4.1 | CDS | 9055574 | 9055576 | 9055574 | ID=cds.MS.gene70282.t1;Parent=MS.gene70282.t1 |
| chr4.1 | exon | 9055268 | 9055462 | 9055268 | ID=MS.gene70282.t1.exon2;Parent=MS.gene70282.t1 |
| chr4.1 | CDS | 9055268 | 9055462 | 9055268 | ID=cds.MS.gene70282.t1;Parent=MS.gene70282.t1 |
| chr4.1 | exon | 9054481 | 9054588 | 9054481 | ID=MS.gene70282.t1.exon3;Parent=MS.gene70282.t1 |
| chr4.1 | CDS | 9054481 | 9054588 | 9054481 | ID=cds.MS.gene70282.t1;Parent=MS.gene70282.t1 |
| chr4.1 | exon | 9054264 | 9054368 | 9054264 | ID=MS.gene70282.t1.exon4;Parent=MS.gene70282.t1 |
| chr4.1 | CDS | 9054264 | 9054368 | 9054264 | ID=cds.MS.gene70282.t1;Parent=MS.gene70282.t1 |
| chr4.1 | exon | 9054090 | 9054146 | 9054090 | ID=MS.gene70282.t1.exon5;Parent=MS.gene70282.t1 |
| chr4.1 | CDS | 9054090 | 9054146 | 9054090 | ID=cds.MS.gene70282.t1;Parent=MS.gene70282.t1 |
| chr4.1 | exon | 9053788 | 9053984 | 9053788 | ID=MS.gene70282.t1.exon6;Parent=MS.gene70282.t1 |
| chr4.1 | CDS | 9053788 | 9053984 | 9053788 | ID=cds.MS.gene70282.t1;Parent=MS.gene70282.t1 |
| chr4.1 | exon | 9051957 | 9052056 | 9051957 | ID=MS.gene70282.t1.exon7;Parent=MS.gene70282.t1 |
| chr4.1 | CDS | 9051957 | 9052056 | 9051957 | ID=cds.MS.gene70282.t1;Parent=MS.gene70282.t1 |
| chr4.1 | exon | 9051728 | 9051840 | 9051728 | ID=MS.gene70282.t1.exon8;Parent=MS.gene70282.t1 |
| chr4.1 | CDS | 9051728 | 9051840 | 9051728 | ID=cds.MS.gene70282.t1;Parent=MS.gene70282.t1 |
| chr4.1 | exon | 9051478 | 9051628 | 9051478 | ID=MS.gene70282.t1.exon9;Parent=MS.gene70282.t1 |
| chr4.1 | CDS | 9051478 | 9051628 | 9051478 | ID=cds.MS.gene70282.t1;Parent=MS.gene70282.t1 |
| chr4.1 | exon | 9051289 | 9051366 | 9051289 | ID=MS.gene70282.t1.exon10;Parent=MS.gene70282.t1 |
| chr4.1 | CDS | 9051289 | 9051366 | 9051289 | ID=cds.MS.gene70282.t1;Parent=MS.gene70282.t1 |
| chr4.1 | exon | 9050881 | 9051099 | 9050881 | ID=MS.gene70282.t1.exon11;Parent=MS.gene70282.t1 |
| chr4.1 | CDS | 9050881 | 9051099 | 9050881 | ID=cds.MS.gene70282.t1;Parent=MS.gene70282.t1 |
| Gene Sequence |
| Protein sequence |
