Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58134.t1 | XP_003630160.2 | 99.3 | 441 | 3 | 0 | 1 | 441 | 1 | 441 | 1.20E-240 | 842 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58134.t1 | Q9FIB6 | 81.0 | 441 | 83 | 1 | 1 | 440 | 1 | 441 | 8.2e-201 | 701.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58134.t1 | B7FLC5 | 99.3 | 441 | 3 | 0 | 1 | 441 | 1 | 441 | 8.9e-241 | 842.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene58134 | 0.878533 | 2.60E-69 | -1.69E-46 |
| MS.gene049193 | MS.gene58134 | 0.803886 | 2.81E-49 | -1.69E-46 |
| MS.gene049208 | MS.gene58134 | 0.807861 | 4.11E-50 | -1.69E-46 |
| MS.gene049254 | MS.gene58134 | 0.80139 | 9.21E-49 | -1.69E-46 |
| MS.gene049283 | MS.gene58134 | 0.863358 | 2.64E-64 | -1.69E-46 |
| MS.gene049350 | MS.gene58134 | 0.814568 | 1.44E-51 | -1.69E-46 |
| MS.gene049368 | MS.gene58134 | 0.844838 | 5.90E-59 | -1.69E-46 |
| MS.gene049499 | MS.gene58134 | 0.84458 | 6.92E-59 | -1.69E-46 |
| MS.gene049744 | MS.gene58134 | 0.805927 | 1.05E-49 | -1.69E-46 |
| MS.gene049801 | MS.gene58134 | 0.804045 | 2.61E-49 | -1.69E-46 |
| MS.gene049807 | MS.gene58134 | 0.814574 | 1.44E-51 | -1.69E-46 |
| MS.gene049983 | MS.gene58134 | 0.851652 | 7.72E-61 | -1.69E-46 |
| MS.gene050084 | MS.gene58134 | 0.854737 | 1.01E-61 | -1.69E-46 |
| MS.gene050085 | MS.gene58134 | 0.870195 | 1.75E-66 | -1.69E-46 |
| MS.gene050114 | MS.gene58134 | 0.811468 | 6.90E-51 | -1.69E-46 |
| MS.gene050116 | MS.gene58134 | 0.800644 | 1.31E-48 | -1.69E-46 |
| MS.gene050213 | MS.gene58134 | 0.849494 | 3.12E-60 | -1.69E-46 |
| MS.gene050359 | MS.gene58134 | 0.850998 | 1.18E-60 | -1.69E-46 |
| MS.gene050361 | MS.gene58134 | 0.819905 | 9.08E-53 | -1.69E-46 |
| MS.gene050414 | MS.gene58134 | 0.825933 | 3.58E-54 | -1.69E-46 |
| MS.gene050551 | MS.gene58134 | 0.865686 | 4.93E-65 | -1.69E-46 |
| MS.gene050556 | MS.gene58134 | 0.853106 | 2.98E-61 | -1.69E-46 |
| MS.gene050646 | MS.gene58134 | 0.84714 | 1.40E-59 | -1.69E-46 |
| MS.gene050654 | MS.gene58134 | 0.864656 | 1.04E-64 | -1.69E-46 |
| MS.gene050689 | MS.gene58134 | 0.825713 | 4.04E-54 | -1.69E-46 |
| MS.gene050838 | MS.gene58134 | 0.828146 | 1.06E-54 | -1.69E-46 |
| MS.gene050941 | MS.gene58134 | 0.807804 | 4.23E-50 | -1.69E-46 |
| MS.gene050945 | MS.gene58134 | 0.835676 | 1.46E-56 | -1.69E-46 |
| MS.gene051003 | MS.gene58134 | 0.846826 | 1.70E-59 | -1.69E-46 |
| MS.gene051102 | MS.gene58134 | 0.836732 | 7.88E-57 | -1.69E-46 |
| MS.gene051209 | MS.gene58134 | 0.823682 | 1.21E-53 | -1.69E-46 |
| MS.gene051234 | MS.gene58134 | 0.846646 | 1.91E-59 | -1.69E-46 |
| MS.gene051343 | MS.gene58134 | 0.877723 | 5.00E-69 | -1.69E-46 |
| MS.gene051381 | MS.gene58134 | 0.843521 | 1.33E-58 | -1.69E-46 |
| MS.gene051642 | MS.gene58134 | 0.80277 | 4.79E-49 | -1.69E-46 |
| MS.gene051676 | MS.gene58134 | 0.829774 | 4.26E-55 | -1.69E-46 |
| MS.gene051699 | MS.gene58134 | 0.811911 | 5.52E-51 | -1.69E-46 |
| MS.gene051724 | MS.gene58134 | 0.811171 | 8.00E-51 | -1.69E-46 |
| MS.gene051744 | MS.gene58134 | 0.820006 | 8.61E-53 | -1.69E-46 |
| MS.gene051800 | MS.gene58134 | 0.801013 | 1.10E-48 | -1.69E-46 |
| MS.gene051831 | MS.gene58134 | 0.80125 | 9.84E-49 | -1.69E-46 |
| MS.gene051852 | MS.gene58134 | 0.820499 | 6.64E-53 | -1.69E-46 |
| MS.gene051856 | MS.gene58134 | 0.809806 | 1.58E-50 | -1.69E-46 |
| MS.gene05188 | MS.gene58134 | 0.804655 | 1.95E-49 | -1.69E-46 |
| MS.gene051975 | MS.gene58134 | 0.858382 | 8.56E-63 | -1.69E-46 |
| MS.gene052016 | MS.gene58134 | 0.806952 | 6.41E-50 | -1.69E-46 |
| MS.gene052072 | MS.gene58134 | 0.83401 | 3.84E-56 | -1.69E-46 |
| MS.gene052118 | MS.gene58134 | 0.802762 | 4.81E-49 | -1.69E-46 |
| MS.gene052168 | MS.gene58134 | 0.802309 | 5.96E-49 | -1.69E-46 |
| MS.gene052242 | MS.gene58134 | -0.849747 | 2.65E-60 | -1.69E-46 |
| MS.gene052307 | MS.gene58134 | 0.877582 | 5.60E-69 | -1.69E-46 |
| MS.gene052335 | MS.gene58134 | 0.805168 | 1.52E-49 | -1.69E-46 |
| MS.gene052342 | MS.gene58134 | 0.835707 | 1.43E-56 | -1.69E-46 |
| MS.gene052434 | MS.gene58134 | 0.835371 | 1.75E-56 | -1.69E-46 |
| MS.gene052463 | MS.gene58134 | 0.831923 | 1.27E-55 | -1.69E-46 |
| MS.gene052514 | MS.gene58134 | 0.806027 | 1.00E-49 | -1.69E-46 |
| MS.gene052516 | MS.gene58134 | 0.801985 | 6.95E-49 | -1.69E-46 |
| MS.gene052533 | MS.gene58134 | 0.813356 | 2.67E-51 | -1.69E-46 |
| MS.gene052609 | MS.gene58134 | 0.912023 | 3.13E-83 | -1.69E-46 |
| MS.gene052681 | MS.gene58134 | 0.813202 | 2.88E-51 | -1.69E-46 |
| MS.gene052735 | MS.gene58134 | 0.801874 | 7.33E-49 | -1.69E-46 |
| MS.gene052775 | MS.gene58134 | 0.860607 | 1.84E-63 | -1.69E-46 |
| MS.gene052776 | MS.gene58134 | 0.889591 | 2.11E-73 | -1.69E-46 |
| MS.gene052855 | MS.gene58134 | 0.830266 | 3.24E-55 | -1.69E-46 |
| MS.gene052932 | MS.gene58134 | 0.835479 | 1.64E-56 | -1.69E-46 |
| MS.gene052994 | MS.gene58134 | 0.817602 | 3.03E-52 | -1.69E-46 |
| MS.gene053058 | MS.gene58134 | 0.872975 | 2.10E-67 | -1.69E-46 |
| MS.gene053079 | MS.gene58134 | 0.864076 | 1.58E-64 | -1.69E-46 |
| MS.gene053143 | MS.gene58134 | 0.878098 | 3.69E-69 | -1.69E-46 |
| MS.gene05315 | MS.gene58134 | 0.831609 | 1.51E-55 | -1.69E-46 |
| MS.gene053226 | MS.gene58134 | 0.805511 | 1.29E-49 | -1.69E-46 |
| MS.gene053486 | MS.gene58134 | 0.82292 | 1.83E-53 | -1.69E-46 |
| MS.gene05350 | MS.gene58134 | 0.8045 | 2.10E-49 | -1.69E-46 |
| MS.gene053564 | MS.gene58134 | 0.807958 | 3.92E-50 | -1.69E-46 |
| MS.gene053620 | MS.gene58134 | 0.803177 | 3.95E-49 | -1.69E-46 |
| MS.gene05364 | MS.gene58134 | 0.811959 | 5.39E-51 | -1.69E-46 |
| MS.gene053726 | MS.gene58134 | 0.821449 | 4.01E-53 | -1.69E-46 |
| MS.gene053931 | MS.gene58134 | 0.803465 | 3.44E-49 | -1.69E-46 |
| MS.gene054004 | MS.gene58134 | 0.80209 | 6.62E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene58134 | 0.805484 | 1.31E-49 | -1.69E-46 |
| MS.gene054178 | MS.gene58134 | 0.811884 | 5.60E-51 | -1.69E-46 |
| MS.gene054479 | MS.gene58134 | 0.841065 | 5.95E-58 | -1.69E-46 |
| MS.gene054576 | MS.gene58134 | 0.817551 | 3.11E-52 | -1.69E-46 |
| MS.gene054641 | MS.gene58134 | 0.805778 | 1.13E-49 | -1.69E-46 |
| MS.gene054709 | MS.gene58134 | 0.812789 | 3.55E-51 | -1.69E-46 |
| MS.gene054824 | MS.gene58134 | 0.821111 | 4.80E-53 | -1.69E-46 |
| MS.gene054892 | MS.gene58134 | 0.835777 | 1.38E-56 | -1.69E-46 |
| MS.gene054893 | MS.gene58134 | 0.841703 | 4.05E-58 | -1.69E-46 |
| MS.gene054957 | MS.gene58134 | 0.806133 | 9.54E-50 | -1.69E-46 |
| MS.gene05517 | MS.gene58134 | 0.813168 | 2.93E-51 | -1.69E-46 |
| MS.gene055231 | MS.gene58134 | 0.801333 | 9.46E-49 | -1.69E-46 |
| MS.gene055310 | MS.gene58134 | 0.812112 | 4.99E-51 | -1.69E-46 |
| MS.gene055311 | MS.gene58134 | 0.853977 | 1.67E-61 | -1.69E-46 |
| MS.gene055313 | MS.gene58134 | 0.857066 | 2.10E-62 | -1.69E-46 |
| MS.gene055314 | MS.gene58134 | 0.827934 | 1.19E-54 | -1.69E-46 |
| MS.gene055386 | MS.gene58134 | 0.814177 | 1.76E-51 | -1.69E-46 |
| MS.gene055469 | MS.gene58134 | 0.839114 | 1.92E-57 | -1.69E-46 |
| MS.gene055513 | MS.gene58134 | 0.900594 | 6.27E-78 | -1.69E-46 |
| MS.gene055582 | MS.gene58134 | 0.813595 | 2.36E-51 | -1.69E-46 |
| MS.gene055864 | MS.gene58134 | 0.867566 | 1.25E-65 | -1.69E-46 |
| MS.gene056045 | MS.gene58134 | 0.887233 | 1.71E-72 | -1.69E-46 |
| MS.gene056097 | MS.gene58134 | 0.844319 | 8.14E-59 | -1.69E-46 |
| MS.gene05615 | MS.gene58134 | 0.837999 | 3.73E-57 | -1.69E-46 |
| MS.gene056181 | MS.gene58134 | 0.885744 | 6.25E-72 | -1.69E-46 |
| MS.gene056308 | MS.gene58134 | 0.845804 | 3.23E-59 | -1.69E-46 |
| MS.gene056390 | MS.gene58134 | 0.826161 | 3.16E-54 | -1.69E-46 |
| MS.gene056403 | MS.gene58134 | 0.832546 | 8.89E-56 | -1.69E-46 |
| MS.gene056507 | MS.gene58134 | 0.861548 | 9.50E-64 | -1.69E-46 |
| MS.gene056509 | MS.gene58134 | 0.811909 | 5.53E-51 | -1.69E-46 |
| MS.gene056519 | MS.gene58134 | 0.812423 | 4.27E-51 | -1.69E-46 |
| MS.gene056578 | MS.gene58134 | 0.813905 | 2.02E-51 | -1.69E-46 |
| MS.gene056605 | MS.gene58134 | 0.821269 | 4.42E-53 | -1.69E-46 |
| MS.gene056699 | MS.gene58134 | 0.856665 | 2.76E-62 | -1.69E-46 |
| MS.gene056787 | MS.gene58134 | 0.847193 | 1.35E-59 | -1.69E-46 |
| MS.gene056831 | MS.gene58134 | 0.832705 | 8.12E-56 | -1.69E-46 |
| MS.gene05686 | MS.gene58134 | 0.816928 | 4.29E-52 | -1.69E-46 |
| MS.gene056973 | MS.gene58134 | 0.809192 | 2.14E-50 | -1.69E-46 |
| MS.gene056986 | MS.gene58134 | 0.831543 | 1.57E-55 | -1.69E-46 |
| MS.gene057034 | MS.gene58134 | 0.85556 | 5.81E-62 | -1.69E-46 |
| MS.gene057102 | MS.gene58134 | 0.825623 | 4.24E-54 | -1.69E-46 |
| MS.gene057174 | MS.gene58134 | 0.801056 | 1.08E-48 | -1.69E-46 |
| MS.gene057208 | MS.gene58134 | 0.807101 | 5.96E-50 | -1.69E-46 |
| MS.gene057320 | MS.gene58134 | 0.800676 | 1.29E-48 | -1.69E-46 |
| MS.gene057360 | MS.gene58134 | 0.824432 | 8.10E-54 | -1.69E-46 |
| MS.gene057371 | MS.gene58134 | 0.81212 | 4.97E-51 | -1.69E-46 |
| MS.gene05781 | MS.gene58134 | 0.814254 | 1.69E-51 | -1.69E-46 |
| MS.gene057869 | MS.gene58134 | 0.804502 | 2.09E-49 | -1.69E-46 |
| MS.gene057890 | MS.gene58134 | -0.806382 | 8.45E-50 | -1.69E-46 |
| MS.gene057915 | MS.gene58134 | 0.814277 | 1.67E-51 | -1.69E-46 |
| MS.gene057919 | MS.gene58134 | 0.816002 | 6.92E-52 | -1.69E-46 |
| MS.gene058010 | MS.gene58134 | 0.83167 | 1.46E-55 | -1.69E-46 |
| MS.gene058081 | MS.gene58134 | 0.819632 | 1.05E-52 | -1.69E-46 |
| MS.gene058095 | MS.gene58134 | 0.812269 | 4.62E-51 | -1.69E-46 |
| MS.gene058126 | MS.gene58134 | 0.805498 | 1.30E-49 | -1.69E-46 |
| MS.gene058159 | MS.gene58134 | 0.816036 | 6.80E-52 | -1.69E-46 |
| MS.gene058289 | MS.gene58134 | 0.860358 | 2.18E-63 | -1.69E-46 |
| MS.gene058292 | MS.gene58134 | 0.884491 | 1.83E-71 | -1.69E-46 |
| MS.gene058330 | MS.gene58134 | 0.81537 | 9.57E-52 | -1.69E-46 |
| MS.gene058429 | MS.gene58134 | 0.804982 | 1.66E-49 | -1.69E-46 |
| MS.gene058520 | MS.gene58134 | 0.801471 | 8.87E-49 | -1.69E-46 |
| MS.gene058638 | MS.gene58134 | 0.85382 | 1.86E-61 | -1.69E-46 |
| MS.gene058639 | MS.gene58134 | 0.855612 | 5.61E-62 | -1.69E-46 |
| MS.gene058647 | MS.gene58134 | 0.807183 | 5.73E-50 | -1.69E-46 |
| MS.gene058649 | MS.gene58134 | 0.801772 | 7.69E-49 | -1.69E-46 |
| MS.gene058668 | MS.gene58134 | 0.811 | 8.71E-51 | -1.69E-46 |
| MS.gene058758 | MS.gene58134 | 0.841837 | 3.73E-58 | -1.69E-46 |
| MS.gene058781 | MS.gene58134 | 0.806314 | 8.73E-50 | -1.69E-46 |
| MS.gene058919 | MS.gene58134 | 0.824443 | 8.05E-54 | -1.69E-46 |
| MS.gene058976 | MS.gene58134 | 0.810778 | 9.73E-51 | -1.69E-46 |
| MS.gene05897 | MS.gene58134 | 0.801108 | 1.05E-48 | -1.69E-46 |
| MS.gene059007 | MS.gene58134 | 0.871809 | 5.15E-67 | -1.69E-46 |
| MS.gene059144 | MS.gene58134 | 0.806219 | 9.15E-50 | -1.69E-46 |
| MS.gene059146 | MS.gene58134 | 0.854204 | 1.44E-61 | -1.69E-46 |
| MS.gene059170 | MS.gene58134 | 0.827777 | 1.30E-54 | -1.69E-46 |
| MS.gene059171 | MS.gene58134 | 0.81824 | 2.17E-52 | -1.69E-46 |
| MS.gene059283 | MS.gene58134 | 0.802226 | 6.20E-49 | -1.69E-46 |
| MS.gene059439 | MS.gene58134 | 0.824475 | 7.91E-54 | -1.69E-46 |
| MS.gene059570 | MS.gene58134 | 0.803754 | 3.00E-49 | -1.69E-46 |
| MS.gene059725 | MS.gene58134 | 0.824349 | 8.47E-54 | -1.69E-46 |
| MS.gene059778 | MS.gene58134 | 0.816039 | 6.79E-52 | -1.69E-46 |
| MS.gene05978 | MS.gene58134 | 0.813458 | 2.53E-51 | -1.69E-46 |
| MS.gene05985 | MS.gene58134 | -0.836048 | 1.18E-56 | -1.69E-46 |
| MS.gene059965 | MS.gene58134 | 0.836463 | 9.22E-57 | -1.69E-46 |
| MS.gene06010 | MS.gene58134 | 0.824736 | 6.87E-54 | -1.69E-46 |
| MS.gene060296 | MS.gene58134 | 0.85486 | 9.29E-62 | -1.69E-46 |
| MS.gene060343 | MS.gene58134 | -0.80373 | 3.03E-49 | -1.69E-46 |
| MS.gene060380 | MS.gene58134 | 0.812473 | 4.16E-51 | -1.69E-46 |
| MS.gene060400 | MS.gene58134 | 0.833549 | 5.00E-56 | -1.69E-46 |
| MS.gene060435 | MS.gene58134 | 0.825593 | 4.31E-54 | -1.69E-46 |
| MS.gene060520 | MS.gene58134 | 0.803132 | 4.03E-49 | -1.69E-46 |
| MS.gene060527 | MS.gene58134 | 0.807968 | 3.90E-50 | -1.69E-46 |
| MS.gene06052 | MS.gene58134 | 0.802904 | 4.50E-49 | -1.69E-46 |
| MS.gene060637 | MS.gene58134 | 0.811438 | 7.00E-51 | -1.69E-46 |
| MS.gene060777 | MS.gene58134 | 0.851371 | 9.27E-61 | -1.69E-46 |
| MS.gene060932 | MS.gene58134 | 0.837457 | 5.14E-57 | -1.69E-46 |
| MS.gene060933 | MS.gene58134 | 0.886374 | 3.61E-72 | -1.69E-46 |
| MS.gene060935 | MS.gene58134 | 0.844933 | 5.56E-59 | -1.69E-46 |
| MS.gene060937 | MS.gene58134 | 0.868053 | 8.69E-66 | -1.69E-46 |
| MS.gene061006 | MS.gene58134 | 0.860679 | 1.75E-63 | -1.69E-46 |
| MS.gene061100 | MS.gene58134 | 0.8747 | 5.50E-68 | -1.69E-46 |
| MS.gene061160 | MS.gene58134 | 0.834295 | 3.26E-56 | -1.69E-46 |
| MS.gene061188 | MS.gene58134 | 0.808284 | 3.34E-50 | -1.69E-46 |
| MS.gene06121 | MS.gene58134 | 0.803706 | 3.07E-49 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58134.t1 | MTR_8g092450 | 99.320 | 441 | 3 | 0 | 1 | 441 | 1 | 441 | 0.0 | 896 |
| MS.gene58134.t1 | MTR_8g092390 | 97.260 | 438 | 12 | 0 | 4 | 441 | 1 | 438 | 0.0 | 872 |
| MS.gene58134.t1 | MTR_5g072475 | 48.352 | 91 | 47 | 0 | 101 | 191 | 35 | 125 | 2.80e-15 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58134.t1 | AT5G09900 | 81.406 | 441 | 81 | 1 | 1 | 440 | 1 | 441 | 0.0 | 730 |
| MS.gene58134.t1 | AT5G09900 | 80.952 | 441 | 83 | 1 | 1 | 440 | 1 | 441 | 0.0 | 727 |
| MS.gene58134.t1 | AT5G64760 | 78.458 | 441 | 94 | 1 | 1 | 440 | 1 | 441 | 0.0 | 698 |
| MS.gene58134.t1 | AT5G64760 | 78.231 | 441 | 95 | 1 | 1 | 440 | 1 | 441 | 0.0 | 696 |
| MS.gene58134.t1 | AT5G64760 | 79.810 | 421 | 84 | 1 | 21 | 440 | 1 | 421 | 0.0 | 681 |
| MS.gene58134.t1 | AT5G09900 | 78.779 | 344 | 72 | 1 | 1 | 343 | 1 | 344 | 0.0 | 547 |
Find 81 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACCTTCAAAGCTGCTTTA+TGG | 0.134030 | 4.2:+9767687 | None:intergenic |
| AAACAACGATCTGATCATTT+AGG | 0.167639 | 4.2:+9772104 | None:intergenic |
| GACCATATTATCACCTTCTT+TGG | 0.222140 | 4.2:+9770661 | None:intergenic |
| TGAAATTTGCCGCTGCTATA+AGG | 0.251024 | 4.2:-9768811 | MS.gene58134:CDS |
| CATTGCTATCCTTTGCTGTT+TGG | 0.295822 | 4.2:+9767798 | None:intergenic |
| AACAACGATCTGATCATTTA+GGG | 0.304111 | 4.2:+9772105 | None:intergenic |
| CAAGAAACTTGCCAAGATTA+AGG | 0.314974 | 4.2:-9771121 | MS.gene58134:CDS |
| TCTTATCAGGTGGAAACTTT+TGG | 0.318210 | 4.2:-9770939 | MS.gene58134:intron |
| TCATCCAATGGACAGCTCTT+TGG | 0.322854 | 4.2:-9768378 | MS.gene58134:CDS |
| CATCCAATGGACAGCTCTTT+GGG | 0.333432 | 4.2:-9768377 | MS.gene58134:CDS |
| CCCCTGTTCTTCCTTAATCT+TGG | 0.345178 | 4.2:+9771110 | None:intergenic |
| ACCATATTATCACCTTCTTT+GGG | 0.346638 | 4.2:+9770662 | None:intergenic |
| AGGATAACATACTGGAAGTT+TGG | 0.347252 | 4.2:+9768520 | None:intergenic |
| TAACTCATGGGCAGCAAACT+TGG | 0.387347 | 4.2:-9767768 | MS.gene58134:CDS |
| TGCCAAGATTAAGGAAGAAC+AGG | 0.388343 | 4.2:-9771112 | MS.gene58134:CDS |
| TTTATTACGAGCTAATGATT+AGG | 0.390801 | 4.2:-9770592 | MS.gene58134:intron |
| ATTCGACATAGATGCATCTA+AGG | 0.393010 | 4.2:-9770696 | MS.gene58134:CDS |
| TGCAGATATTCCGTCTCTAC+TGG | 0.398939 | 4.2:-9770627 | MS.gene58134:CDS |
| GCCCAAAGAAGGTGATAATA+TGG | 0.427248 | 4.2:-9770663 | MS.gene58134:CDS |
| TTCAAGATAATCATTGTTGT+GGG | 0.433017 | 4.2:+9768830 | None:intergenic |
| GGTCCATAAAGCAGCTTTGA+AGG | 0.436788 | 4.2:-9767690 | MS.gene58134:CDS |
| TGAGAAGCATCTGTCTGATA+TGG | 0.444884 | 4.2:-9767876 | MS.gene58134:CDS |
| TCAATACGAGTTTCAATATC+CGG | 0.449985 | 4.2:+9771325 | None:intergenic |
| ATGTTGAGATTGAGAGAGCT+AGG | 0.451064 | 4.2:-9771149 | MS.gene58134:CDS |
| GCATCTATGTCGAATACTCT+TGG | 0.459620 | 4.2:+9770704 | None:intergenic |
| TTTCAAGATAATCATTGTTG+TGG | 0.472189 | 4.2:+9768829 | None:intergenic |
| TTCGTTTCTGTAGGCAAACA+TGG | 0.483039 | 4.2:-9772260 | MS.gene58134:intron |
| TATGGTTGTTACCAAGGCTC+TGG | 0.489637 | 4.2:-9767858 | MS.gene58134:CDS |
| TCGATTGTGCCTAGACCGCC+AGG | 0.490883 | 4.2:-9770765 | MS.gene58134:CDS |
| GGAGAAACTGCTTGATCTTG+TGG | 0.501917 | 4.2:-9767747 | MS.gene58134:CDS |
| CAAGGTGGAATTTAAAAGAC+TGG | 0.502902 | 4.2:+9768567 | None:intergenic |
| TTTGACAATGAGATGGCCTC+TGG | 0.504799 | 4.2:-9768337 | MS.gene58134:CDS |
| AATCTTTGCAACCAGAGCCT+TGG | 0.507062 | 4.2:+9767847 | None:intergenic |
| GCAAAGATTGACAGACCAAT+GGG | 0.508334 | 4.2:-9767833 | MS.gene58134:CDS |
| TTGTATCAAAATACTATGCA+AGG | 0.512334 | 4.2:-9768138 | MS.gene58134:CDS |
| GCAATGATGTACTTAACTCA+TGG | 0.517832 | 4.2:-9767781 | MS.gene58134:CDS |
| ACATTGAACAGTGTATCTGC+TGG | 0.524074 | 4.2:-9771292 | MS.gene58134:CDS |
| GGACATAATCCTGGCGGTCT+AGG | 0.525396 | 4.2:+9770756 | None:intergenic |
| TCTCCCAAAGAGCTGTCCAT+TGG | 0.527502 | 4.2:+9768374 | None:intergenic |
| CAAAGCTGCTTTATGGACCA+TGG | 0.531327 | 4.2:+9767694 | None:intergenic |
| ACGACGCGGTCAGCTCAAGC+AGG | 0.533278 | 4.2:-9772074 | MS.gene58134:intron |
| TTTGTGCACGGACATAATCC+TGG | 0.535226 | 4.2:+9770747 | None:intergenic |
| GTCTGATATGGTTGTTACCA+AGG | 0.537128 | 4.2:-9767864 | MS.gene58134:CDS |
| TGTAACAGCTATGGTACAGC+AGG | 0.546142 | 4.2:-9771371 | MS.gene58134:CDS |
| TGGAAACAGACTATTCCCAT+TGG | 0.557174 | 4.2:+9767818 | None:intergenic |
| TGAGATTGAGAGAGCTAGGT+TGG | 0.557330 | 4.2:-9771145 | MS.gene58134:CDS |
| TTCTTGAGAGTATTTGTGCA+CGG | 0.563823 | 4.2:+9770735 | None:intergenic |
| AGTAGAGACGGAATATCTGC+AGG | 0.564085 | 4.2:+9770629 | None:intergenic |
| CATTGAACAGTGTATCTGCT+GGG | 0.568762 | 4.2:-9771291 | MS.gene58134:CDS |
| TGCAAAGATTGACAGACCAA+TGG | 0.572504 | 4.2:-9767834 | MS.gene58134:CDS |
| GAGGAAAATATGTTGGTGCT+TGG | 0.574826 | 4.2:-9768617 | MS.gene58134:CDS |
| GAGAAACAAATGCGTCTCGC+CGG | 0.580321 | 4.2:-9772199 | MS.gene58134:CDS |
| CGTCTCGCCGGCGAAATAGT+CGG | 0.582458 | 4.2:-9772187 | MS.gene58134:CDS |
| ATCACAGGCTGTAACAGCTA+TGG | 0.585065 | 4.2:-9771380 | MS.gene58134:intron |
| CAATGATGTACTTAACTCAT+GGG | 0.587731 | 4.2:-9767780 | MS.gene58134:CDS |
| TCTAGTGCCGACTATTTCGC+CGG | 0.590784 | 4.2:+9772180 | None:intergenic |
| TTTAAAAGACTGGACTGCAT+CGG | 0.598019 | 4.2:+9768577 | None:intergenic |
| TGATTTGATGCAAGAAATTG+CGG | 0.598896 | 4.2:-9771070 | MS.gene58134:intron |
| AGATCCTGAGGAAAATATGT+TGG | 0.600984 | 4.2:-9768624 | MS.gene58134:CDS |
| AGATAGATTTCTATCCTCCA+AGG | 0.603704 | 4.2:+9768549 | None:intergenic |
| TTTGAAGCAGCTGGTCACCA+TGG | 0.604172 | 4.2:-9768404 | MS.gene58134:CDS |
| TGTTTCAACTCCAGTAGAGA+CGG | 0.610635 | 4.2:+9770617 | None:intergenic |
| CATATATTGCCTTATAGCAG+CGG | 0.613022 | 4.2:+9768802 | None:intergenic |
| GCAATATATTGACGAGACAC+CGG | 0.613740 | 4.2:-9771344 | MS.gene58134:CDS |
| AGGTGATAATATGGTCGAAG+AGG | 0.618539 | 4.2:-9770654 | MS.gene58134:CDS |
| GAACGAGTTTGACAATGAGA+TGG | 0.619618 | 4.2:-9768344 | MS.gene58134:CDS |
| CCTACCGGAATAAAATCAGT+AGG | 0.625120 | 4.2:+9768756 | None:intergenic |
| GCCAAGATTAAGGAAGAACA+GGG | 0.626902 | 4.2:-9771111 | MS.gene58134:CDS |
| AATTTCTTGCATCAAATCAG+CGG | 0.629438 | 4.2:+9771074 | None:intergenic |
| TCACCATGGAAGTCATCCAA+TGG | 0.630891 | 4.2:-9768390 | MS.gene58134:CDS |
| GAACAGTGTATCTGCTGGGA+AGG | 0.631990 | 4.2:-9771287 | MS.gene58134:intron |
| AGTCTGTTTCCAAACAGCAA+AGG | 0.634017 | 4.2:-9767807 | MS.gene58134:CDS |
| CTGGACTGCATCGGTGAATG+TGG | 0.634478 | 4.2:+9768586 | None:intergenic |
| TCAAATACACAAGGAAACCA+TGG | 0.640379 | 4.2:-9767711 | MS.gene58134:CDS |
| AGAACAGGGGCTTATAGCTG+AGG | 0.642737 | 4.2:-9771097 | MS.gene58134:CDS |
| TCTTGCATATACAGATCCTG+AGG | 0.670391 | 4.2:-9768636 | MS.gene58134:intron |
| GAGCTGTCATCAAATACACA+AGG | 0.670564 | 4.2:-9767720 | MS.gene58134:CDS |
| TAGATTTCTATCCTCCAAGG+TGG | 0.684299 | 4.2:+9768552 | None:intergenic |
| TGTCCATTGGATGACTTCCA+TGG | 0.689019 | 4.2:+9768387 | None:intergenic |
| CCAAGATTAAGGAAGAACAG+GGG | 0.732046 | 4.2:-9771110 | MS.gene58134:CDS |
| GTGCACGGACATAATCCTGG+CGG | 0.759607 | 4.2:+9770750 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTATTTATTTGTGTTT+GGG | - | chr4.2:9770916-9770935 | MS.gene58134:CDS | 10.0% |
| !! | TAAATTTATTTATTTGTGTT+TGG | - | chr4.2:9770915-9770934 | MS.gene58134:CDS | 10.0% |
| !!! | AAAAAAAATAAAAAAGTGTA+AGG | + | chr4.2:9771805-9771824 | None:intergenic | 10.0% |
| !!! | TAGTTTATTTCTTTTTTAAA+GGG | - | chr4.2:9772109-9772128 | MS.gene58134:CDS | 10.0% |
| !!! | TTAGTTTATTTCTTTTTTAA+AGG | - | chr4.2:9772108-9772127 | MS.gene58134:CDS | 10.0% |
| !!! | TTTGAAAATGATTTAATTTT+TGG | + | chr4.2:9770862-9770881 | None:intergenic | 10.0% |
| !! | AAAAAAGAAATAAACTAAGA+TGG | + | chr4.2:9772106-9772125 | None:intergenic | 15.0% |
| !! | AAAAACAATAAAAATACAGA+AGG | + | chr4.2:9769034-9769053 | None:intergenic | 15.0% |
| !! | AAGTTCATAAAATTACTAAT+AGG | + | chr4.2:9768204-9768223 | None:intergenic | 15.0% |
| !! | AATTATACAACAACAATATA+TGG | + | chr4.2:9768590-9768609 | None:intergenic | 15.0% |
| !! | GTTAATAATTAAAAACTTGT+TGG | + | chr4.2:9770029-9770048 | None:intergenic | 15.0% |
| !!! | AGTTTATTTCTTTTTTAAAG+GGG | - | chr4.2:9772110-9772129 | MS.gene58134:CDS | 15.0% |
| !!! | TTCTGTATTTTTATTGTTTT+TGG | - | chr4.2:9769033-9769052 | MS.gene58134:intron | 15.0% |
| !! | AACTTATATCATTAGTAACA+AGG | + | chr4.2:9770113-9770132 | None:intergenic | 20.0% |
| !! | AATAAGTTGTTTATCCAAAA+AGG | + | chr4.2:9768305-9768324 | None:intergenic | 20.0% |
| !! | ATAAGGAAGAAAAAAAAATC+AGG | + | chr4.2:9771163-9771182 | None:intergenic | 20.0% |
| !! | ATATTTGAACATGATTAGAA+AGG | + | chr4.2:9771568-9771587 | None:intergenic | 20.0% |
| !! | TACTATAAGATTCTGTTATA+CGG | - | chr4.2:9771347-9771366 | MS.gene58134:CDS | 20.0% |
| !! | TTTCAATTGTAGATTTCTTA+TGG | - | chr4.2:9768096-9768115 | MS.gene58134:CDS | 20.0% |
| !!! | AAAACATATGTCCTTTAAAA+TGG | + | chr4.2:9768843-9768862 | None:intergenic | 20.0% |
| !!! | AAGTTCAAACTCATTTTATA+TGG | + | chr4.2:9770495-9770514 | None:intergenic | 20.0% |
| !!! | ATAAAAAAGTGTAAGGAATT+CGG | + | chr4.2:9771798-9771817 | None:intergenic | 20.0% |
| !!! | CTGTTAATAACTTTTTCTTA+TGG | - | chr4.2:9772003-9772022 | MS.gene58134:intron | 20.0% |
| !!! | CTTAATTAAGTTTTATCTGT+AGG | - | chr4.2:9768373-9768392 | MS.gene58134:CDS | 20.0% |
| !!! | TTCTAATAAGTTACTGATTT+GGG | - | chr4.2:9769232-9769251 | MS.gene58134:intron | 20.0% |
| !!! | TTTCTAATAAGTTACTGATT+TGG | - | chr4.2:9769231-9769250 | MS.gene58134:intron | 20.0% |
| ! | AACGAAATGAAAAGCAATTA+TGG | + | chr4.2:9767772-9767791 | None:intergenic | 25.0% |
| ! | AAGATTTGATACAAAATCGA+TGG | + | chr4.2:9770318-9770337 | None:intergenic | 25.0% |
| ! | ACACAATACAACATACAAAT+TGG | + | chr4.2:9768867-9768886 | None:intergenic | 25.0% |
| ! | AGATTTGATACAAAATCGAT+GGG | + | chr4.2:9770317-9770336 | None:intergenic | 25.0% |
| ! | AGTAATGTAGAGTAAAGAAT+TGG | - | chr4.2:9770967-9770986 | MS.gene58134:intron | 25.0% |
| ! | CAAAGAAAAAACTATATCCT+TGG | - | chr4.2:9772045-9772064 | MS.gene58134:intron | 25.0% |
| ! | GAGAAGATAATAAAACAGAA+TGG | + | chr4.2:9768808-9768827 | None:intergenic | 25.0% |
| ! | GATTCCAAAATTAACAGTAT+AGG | + | chr4.2:9769726-9769745 | None:intergenic | 25.0% |
| ! | GTATATGCAAGAACAATATT+TGG | + | chr4.2:9771402-9771421 | None:intergenic | 25.0% |
| ! | GTTATCTTGTACTGTATTTA+TGG | - | chr4.2:9770185-9770204 | MS.gene58134:intron | 25.0% |
| ! | TCATTTGAATTATGTGTGAA+GGG | - | chr4.2:9770731-9770750 | MS.gene58134:CDS | 25.0% |
| ! | TCTTCTACGTTAAATTGTTT+AGG | - | chr4.2:9769257-9769276 | MS.gene58134:intron | 25.0% |
| ! | TGGAATTGGAAAGAAAATAA+GGG | + | chr4.2:9770373-9770392 | None:intergenic | 25.0% |
| ! | TTATGCAAGAGTAATTGATT+AGG | + | chr4.2:9772140-9772159 | None:intergenic | 25.0% |
| ! | TTCAAGATAATCATTGTTGT+GGG | + | chr4.2:9771219-9771238 | None:intergenic | 25.0% |
| ! | TTCATTTGAATTATGTGTGA+AGG | - | chr4.2:9770730-9770749 | MS.gene58134:CDS | 25.0% |
| ! | TTGGAATTGGAAAGAAAATA+AGG | + | chr4.2:9770374-9770393 | None:intergenic | 25.0% |
| ! | TTGTATCAAAATACTATGCA+AGG | - | chr4.2:9771908-9771927 | MS.gene58134:intron | 25.0% |
| ! | TTTATTACGAGCTAATGATT+AGG | - | chr4.2:9769454-9769473 | MS.gene58134:intron | 25.0% |
| ! | TTTCAAGATAATCATTGTTG+TGG | + | chr4.2:9771220-9771239 | None:intergenic | 25.0% |
| ! | TTTCAGAATAGTTAAGAACT+GGG | + | chr4.2:9770449-9770468 | None:intergenic | 25.0% |
| !! | ATAAATTTTGTGAGACTGTA+TGG | + | chr4.2:9768530-9768549 | None:intergenic | 25.0% |
| !! | ATCCTTTTTATCTATATCTG+TGG | - | chr4.2:9769919-9769938 | MS.gene58134:intron | 25.0% |
| !! | ATGTCCTATACTGTTAATTT+TGG | - | chr4.2:9769719-9769738 | MS.gene58134:intron | 25.0% |
| !! | CTTAGCATTATCCATTTTAA+AGG | - | chr4.2:9768829-9768848 | MS.gene58134:CDS | 25.0% |
| !! | TAAATTTTGTGAGACTGTAT+GGG | + | chr4.2:9768529-9768548 | None:intergenic | 25.0% |
| !! | TCCTTTTTATCTATATCTGT+GGG | - | chr4.2:9769920-9769939 | MS.gene58134:intron | 25.0% |
| !!! | AAATCCTACTGATTTTATTC+CGG | - | chr4.2:9771286-9771305 | MS.gene58134:intron | 25.0% |
| !!! | AACTTTGGAAATTTTGGAAT+TGG | + | chr4.2:9770387-9770406 | None:intergenic | 25.0% |
| !!! | ATTTTGGAATCTGAAAGATA+AGG | - | chr4.2:9769735-9769754 | MS.gene58134:intron | 25.0% |
| !!! | ATTTTTCAGAACAGTATCAA+TGG | + | chr4.2:9770580-9770599 | None:intergenic | 25.0% |
| !!! | GTTTTATTTAATCGATTGGT+AGG | - | chr4.2:9768034-9768053 | MS.gene58134:intron | 25.0% |
| !!! | TATTCTGAAACAAAGCATTA+TGG | - | chr4.2:9770459-9770478 | MS.gene58134:intron | 25.0% |
| !!! | TGTTTTAATTCTTAGCTTGA+TGG | - | chr4.2:9770049-9770068 | MS.gene58134:intron | 25.0% |
| !!! | TTGGGTTTTATTTAATCGAT+TGG | - | chr4.2:9768030-9768049 | MS.gene58134:intron | 25.0% |
| !!! | TTTTTTTTTCTTCCTTATGC+TGG | - | chr4.2:9771165-9771184 | MS.gene58134:intron | 25.0% |
| AAACAACGATCTGATCATTT+AGG | + | chr4.2:9767945-9767964 | None:intergenic | 30.0% | |
| AACAACGATCTGATCATTTA+GGG | + | chr4.2:9767944-9767963 | None:intergenic | 30.0% | |
| AAGAAATACTACAACGAAAC+AGG | + | chr4.2:9769497-9769516 | None:intergenic | 30.0% | |
| AATTTCTTGCATCAAATCAG+CGG | + | chr4.2:9768975-9768994 | None:intergenic | 30.0% | |
| AATTTGAGTAAACACAAGCA+AGG | + | chr4.2:9769844-9769863 | None:intergenic | 30.0% | |
| ACCATATTATCACCTTCTTT+GGG | + | chr4.2:9769387-9769406 | None:intergenic | 30.0% | |
| AGCAGCATAAATATAAACGA+CGG | + | chr4.2:9770694-9770713 | None:intergenic | 30.0% | |
| AGTAAGAAATATCATGAACC+AGG | + | chr4.2:9771134-9771153 | None:intergenic | 30.0% | |
| AGTATCAATGGTAAAAGACA+AGG | + | chr4.2:9770568-9770587 | None:intergenic | 30.0% | |
| ATGTAATGTGCAATCTTATC+AGG | - | chr4.2:9769094-9769113 | MS.gene58134:intron | 30.0% | |
| CAATGATGTACTTAACTCAT+GGG | - | chr4.2:9772266-9772285 | MS.gene58134:intron | 30.0% | |
| CAATTACTCTTGCATAATTC+AGG | - | chr4.2:9772143-9772162 | MS.gene58134:CDS | 30.0% | |
| CACACATAATTCAAATGAAC+AGG | + | chr4.2:9770729-9770748 | None:intergenic | 30.0% | |
| CCTAAGAAACTTAGATCATT+AGG | + | chr4.2:9770163-9770182 | None:intergenic | 30.0% | |
| CCTAATGATCTAAGTTTCTT+AGG | - | chr4.2:9770160-9770179 | MS.gene58134:intron | 30.0% | |
| GTTTCAGAATAGTTAAGAAC+TGG | + | chr4.2:9770450-9770469 | None:intergenic | 30.0% | |
| TCAATACGAGTTTCAATATC+CGG | + | chr4.2:9768724-9768743 | None:intergenic | 30.0% | |
| TCCCACAGATATAGATAAAA+AGG | + | chr4.2:9769924-9769943 | None:intergenic | 30.0% | |
| TGAAAGATAGGATAACATAC+TGG | + | chr4.2:9771537-9771556 | None:intergenic | 30.0% | |
| TGATTTGATGCAAGAAATTG+CGG | - | chr4.2:9768976-9768995 | MS.gene58134:intron | 30.0% | |
| TTAAATAAGCCAATCCAAAC+AGG | - | chr4.2:9768564-9768583 | MS.gene58134:CDS | 30.0% | |
| TTAATCGATTGGTAGGTTTA+GGG | - | chr4.2:9768041-9768060 | MS.gene58134:intron | 30.0% | |
| TTAGTGATGACAGAAATAGT+AGG | - | chr4.2:9769192-9769211 | MS.gene58134:intron | 30.0% | |
| TTTAATCGATTGGTAGGTTT+AGG | - | chr4.2:9768040-9768059 | MS.gene58134:intron | 30.0% | |
| ! | AAATTGATGCGTTTTGTGTT+AGG | - | chr4.2:9768005-9768024 | MS.gene58134:intron | 30.0% |
| ! | AATTGATGCGTTTTGTGTTA+GGG | - | chr4.2:9768006-9768025 | MS.gene58134:intron | 30.0% |
| ! | ATCAGTAGGATTTTCTTTGA+TGG | + | chr4.2:9771279-9771298 | None:intergenic | 30.0% |
| ! | GTGAGAATCGTGATATTTTA+CGG | - | chr4.2:9768620-9768639 | MS.gene58134:CDS | 30.0% |
| ! | GTGTAGTTAGAAAGAGTTTT+GGG | - | chr4.2:9768136-9768155 | MS.gene58134:CDS | 30.0% |
| ! | TACAACAAGAATGTTCTGAA+AGG | + | chr4.2:9771893-9771912 | None:intergenic | 30.0% |
| ! | TATTTATGGATTGCTAGAGT+TGG | - | chr4.2:9770199-9770218 | MS.gene58134:intron | 30.0% |
| ! | TGTGTAGTTAGAAAGAGTTT+TGG | - | chr4.2:9768135-9768154 | MS.gene58134:CDS | 30.0% |
| ! | TGTTTAGAATTCCTTGTCAT+TGG | - | chr4.2:9771590-9771609 | MS.gene58134:intron | 30.0% |
| !! | AACTTTTTCTTATGGTGTGT+GGG | - | chr4.2:9772011-9772030 | MS.gene58134:intron | 30.0% |
| !! | AATTGTTGTTTGTCTACTGT+TGG | - | chr4.2:9770808-9770827 | MS.gene58134:intron | 30.0% |
| !! | AGGGATAACTTTGGAAATTT+TGG | + | chr4.2:9770393-9770412 | None:intergenic | 30.0% |
| !! | CTACATATTTTTCTAGTACC+TGG | - | chr4.2:9771113-9771132 | MS.gene58134:CDS | 30.0% |
| !! | CTATGATTTGTTTCTATGCT+TGG | - | chr4.2:9769944-9769963 | MS.gene58134:intron | 30.0% |
| !! | GTTGTTTTCATATGCTATCT+TGG | - | chr4.2:9768438-9768457 | MS.gene58134:intron | 30.0% |
| !! | TAACTTTTTCTTATGGTGTG+TGG | - | chr4.2:9772010-9772029 | MS.gene58134:intron | 30.0% |
| !! | TGTCATAAGCTGTTTTCATA+AGG | - | chr4.2:9768500-9768519 | MS.gene58134:intron | 30.0% |
| !! | TTCAGTTTCATTCACTTTTG+AGG | - | chr4.2:9769635-9769654 | MS.gene58134:intron | 30.0% |
| !! | TTCATTCACTTTTGAGGATA+TGG | - | chr4.2:9769641-9769660 | MS.gene58134:intron | 30.0% |
| !!! | TACGTTGTTTTAGACTTCAA+AGG | - | chr4.2:9768161-9768180 | MS.gene58134:intron | 30.0% |
| AAAACATGTTGCAAGAGTGA+AGG | + | chr4.2:9770837-9770856 | None:intergenic | 35.0% | |
| AAAGAGAATAGAAAGCCTAC+CGG | + | chr4.2:9771308-9771327 | None:intergenic | 35.0% | |
| AACCCAAGTTTAGAAAGCTA+TGG | + | chr4.2:9771024-9771043 | None:intergenic | 35.0% | |
| AAGGAATCCAAATGTTAGGA+AGG | + | chr4.2:9770549-9770568 | None:intergenic | 35.0% | |
| AAGGATGAGAGATGAAAGAT+AGG | + | chr4.2:9771549-9771568 | None:intergenic | 35.0% | |
| AATATATGGCCTGTTTGGAT+TGG | + | chr4.2:9768576-9768595 | None:intergenic | 35.0% | |
| AATTATGGCGTGAGATTAAC+AGG | + | chr4.2:9767757-9767776 | None:intergenic | 35.0% | |
| ACAACAATATATGGCCTGTT+TGG | + | chr4.2:9768581-9768600 | None:intergenic | 35.0% | |
| ACCCAAGTTTAGAAAGCTAT+GGG | + | chr4.2:9771023-9771042 | None:intergenic | 35.0% | |
| ACTGTTCAGTTCAGATACTA+TGG | - | chr4.2:9768278-9768297 | MS.gene58134:intron | 35.0% | |
| AGACAAGGAATCCAAATGTT+AGG | + | chr4.2:9770553-9770572 | None:intergenic | 35.0% | |
| AGATAGATTTCTATCCTCCA+AGG | + | chr4.2:9771500-9771519 | None:intergenic | 35.0% | |
| AGATCCTGAGGAAAATATGT+TGG | - | chr4.2:9771422-9771441 | MS.gene58134:intron | 35.0% | |
| AGATGAAAAGTAGGGATGAA+AGG | + | chr4.2:9770413-9770432 | None:intergenic | 35.0% | |
| AGCAGACAAAGATGAAAAGT+AGG | + | chr4.2:9770422-9770441 | None:intergenic | 35.0% | |
| AGCCTACTATATACTATCAC+AGG | - | chr4.2:9768651-9768670 | MS.gene58134:intron | 35.0% | |
| AGCCTGTGATAGTATATAGT+AGG | + | chr4.2:9768656-9768675 | None:intergenic | 35.0% | |
| AGGATAACATACTGGAAGTT+TGG | + | chr4.2:9771529-9771548 | None:intergenic | 35.0% | |
| ATATCCTTGGAAAGTGAATG+TGG | - | chr4.2:9772058-9772077 | MS.gene58134:intron | 35.0% | |
| ATTATGGCGTGAGATTAACA+GGG | + | chr4.2:9767756-9767775 | None:intergenic | 35.0% | |
| ATTCGACATAGATGCATCTA+AGG | - | chr4.2:9769350-9769369 | MS.gene58134:intron | 35.0% | |
| CAAGAAACTTGCCAAGATTA+AGG | - | chr4.2:9768925-9768944 | MS.gene58134:intron | 35.0% | |
| CAAGGTGGAATTTAAAAGAC+TGG | + | chr4.2:9771482-9771501 | None:intergenic | 35.0% | |
| CATATATTGCCTTATAGCAG+CGG | + | chr4.2:9771247-9771266 | None:intergenic | 35.0% | |
| GAAAAGAAAAAGCCCAAAGA+AGG | - | chr4.2:9769372-9769391 | MS.gene58134:intron | 35.0% | |
| GACATTAATGCATCACTGTT+AGG | + | chr4.2:9769704-9769723 | None:intergenic | 35.0% | |
| GACCATATTATCACCTTCTT+TGG | + | chr4.2:9769388-9769407 | None:intergenic | 35.0% | |
| GATGAAAAGTAGGGATGAAA+GGG | + | chr4.2:9770412-9770431 | None:intergenic | 35.0% | |
| GCAATGATGTACTTAACTCA+TGG | - | chr4.2:9772265-9772284 | MS.gene58134:intron | 35.0% | |
| GCAGACAAAGATGAAAAGTA+GGG | + | chr4.2:9770421-9770440 | None:intergenic | 35.0% | |
| GTAGATACTCTAAATTGTCC+TGG | - | chr4.2:9769601-9769620 | MS.gene58134:intron | 35.0% | |
| TAATGTGCAATCTTATCAGG+TGG | - | chr4.2:9769097-9769116 | MS.gene58134:intron | 35.0% | |
| TCAAATACACAAGGAAACCA+TGG | - | chr4.2:9772335-9772354 | MS.gene58134:intron | 35.0% | |
| TTCACTCAAAAACTTTCCAG+AGG | + | chr4.2:9771728-9771747 | None:intergenic | 35.0% | |
| TTTAAAAGACTGGACTGCAT+CGG | + | chr4.2:9771472-9771491 | None:intergenic | 35.0% | |
| ! | AAACCTTCAAAGCTGCTTTA+TGG | + | chr4.2:9772362-9772381 | None:intergenic | 35.0% |
| ! | CAGTCTTTTAAATTCCACCT+TGG | - | chr4.2:9771480-9771499 | MS.gene58134:intron | 35.0% |
| ! | GCTTTTCATTTCGTTTCTGT+AGG | - | chr4.2:9767777-9767796 | MS.gene58134:CDS | 35.0% |
| ! | GGTTTTCTGTCTGTGATTTT+AGG | - | chr4.2:9771186-9771205 | MS.gene58134:intron | 35.0% |
| ! | GTAGGATTTTCTTTGATGGA+CGG | + | chr4.2:9771275-9771294 | None:intergenic | 35.0% |
| ! | TCAGATACTATGGTCCTTTT+TGG | - | chr4.2:9768288-9768307 | MS.gene58134:CDS | 35.0% |
| ! | TCTTATCAGGTGGAAACTTT+TGG | - | chr4.2:9769107-9769126 | MS.gene58134:intron | 35.0% |
| ! | TCTTTTAAATTCCACCTTGG+AGG | - | chr4.2:9771483-9771502 | MS.gene58134:intron | 35.0% |
| ! | TTTGGTTCGCTTGAAACTAT+CGG | - | chr4.2:9768065-9768084 | MS.gene58134:intron | 35.0% |
| !! | ACTTTTTCTTATGGTGTGTG+GGG | - | chr4.2:9772012-9772031 | MS.gene58134:intron | 35.0% |
| !! | ATTTAGGGTTTTCCATGCTT+TGG | + | chr4.2:9767929-9767948 | None:intergenic | 35.0% |
| !! | TTCTTGAGAGTATTTGTGCA+CGG | + | chr4.2:9769314-9769333 | None:intergenic | 35.0% |
| !! | TTGTTTCTATGCTTGGCATT+TGG | - | chr4.2:9769951-9769970 | MS.gene58134:intron | 35.0% |
| !!! | TGAGGATATGGTTTTGATGT+TGG | - | chr4.2:9769653-9769672 | MS.gene58134:intron | 35.0% |
| AAAGTGCACAATTACAGTGC+AGG | + | chr4.2:9770281-9770300 | None:intergenic | 40.0% | |
| AACAGGTACAACCAATGACA+AGG | + | chr4.2:9771604-9771623 | None:intergenic | 40.0% | |
| AACTGAAAACGCAGAAAACC+AGG | + | chr4.2:9769622-9769641 | None:intergenic | 40.0% | |
| ACAAAACTCCTGTCATGACA+AGG | - | chr4.2:9770766-9770785 | MS.gene58134:CDS | 40.0% | |
| ACAGACAGAAAACCAGCATA+AGG | + | chr4.2:9771180-9771199 | None:intergenic | 40.0% | |
| ACATTGAACAGTGTATCTGC+TGG | - | chr4.2:9768754-9768773 | MS.gene58134:intron | 40.0% | |
| AGGGATGAAAGGGATAACTT+TGG | + | chr4.2:9770402-9770421 | None:intergenic | 40.0% | |
| AGGTGATAATATGGTCGAAG+AGG | - | chr4.2:9769392-9769411 | MS.gene58134:intron | 40.0% | |
| AGTCTGTTTCCAAACAGCAA+AGG | - | chr4.2:9772239-9772258 | MS.gene58134:CDS | 40.0% | |
| ATGTTGAGATTGAGAGAGCT+AGG | - | chr4.2:9768897-9768916 | MS.gene58134:intron | 40.0% | |
| CATTGAACAGTGTATCTGCT+GGG | - | chr4.2:9768755-9768774 | MS.gene58134:intron | 40.0% | |
| CCAAGATTAAGGAAGAACAG+GGG | - | chr4.2:9768936-9768955 | MS.gene58134:intron | 40.0% | |
| CCCAAGTTTAGAAAGCTATG+GGG | + | chr4.2:9771022-9771041 | None:intergenic | 40.0% | |
| CCCCATAGCTTTCTAAACTT+GGG | - | chr4.2:9771019-9771038 | MS.gene58134:intron | 40.0% | |
| CCTACCGGAATAAAATCAGT+AGG | + | chr4.2:9771293-9771312 | None:intergenic | 40.0% | |
| CTTGGAAAGTGAATGTGGTA+GGG | - | chr4.2:9772063-9772082 | MS.gene58134:intron | 40.0% | |
| GAACGAGTTTGACAATGAGA+TGG | - | chr4.2:9771702-9771721 | MS.gene58134:intron | 40.0% | |
| GAGCTGTCATCAAATACACA+AGG | - | chr4.2:9772326-9772345 | MS.gene58134:intron | 40.0% | |
| GAGGTGTGTAATGCTAGTAA+TGG | - | chr4.2:9771973-9771992 | MS.gene58134:intron | 40.0% | |
| GAGTAAAGAATTGGTCACAG+TGG | - | chr4.2:9770976-9770995 | MS.gene58134:intron | 40.0% | |
| GCAAAGATTGACAGACCAAT+GGG | - | chr4.2:9772213-9772232 | MS.gene58134:CDS | 40.0% | |
| GCAATATATTGACGAGACAC+CGG | - | chr4.2:9768702-9768721 | MS.gene58134:intron | 40.0% | |
| GCATCTATGTCGAATACTCT+TGG | + | chr4.2:9769345-9769364 | None:intergenic | 40.0% | |
| GCCAAGATTAAGGAAGAACA+GGG | - | chr4.2:9768935-9768954 | MS.gene58134:intron | 40.0% | |
| GCCCAAAGAAGGTGATAATA+TGG | - | chr4.2:9769383-9769402 | MS.gene58134:intron | 40.0% | |
| GTCATGACAAGGTTTAGGAA+AGG | - | chr4.2:9770777-9770796 | MS.gene58134:intron | 40.0% | |
| GTCTGATATGGTTGTTACCA+AGG | - | chr4.2:9772182-9772201 | MS.gene58134:CDS | 40.0% | |
| TACTAGCATTACACACCTCT+AGG | + | chr4.2:9771972-9771991 | None:intergenic | 40.0% | |
| TAGATTTCTATCCTCCAAGG+TGG | + | chr4.2:9771497-9771516 | None:intergenic | 40.0% | |
| TCCCCATAGCTTTCTAAACT+TGG | - | chr4.2:9771018-9771037 | MS.gene58134:intron | 40.0% | |
| TCTTGCATATACAGATCCTG+AGG | - | chr4.2:9771410-9771429 | MS.gene58134:intron | 40.0% | |
| TGAAATTTGCCGCTGCTATA+AGG | - | chr4.2:9771235-9771254 | MS.gene58134:intron | 40.0% | |
| TGCAAAGATTGACAGACCAA+TGG | - | chr4.2:9772212-9772231 | MS.gene58134:CDS | 40.0% | |
| TGCCAAGATTAAGGAAGAAC+AGG | - | chr4.2:9768934-9768953 | MS.gene58134:intron | 40.0% | |
| TGGAAACAGACTATTCCCAT+TGG | + | chr4.2:9772231-9772250 | None:intergenic | 40.0% | |
| TGGTCATCCTTCCTAACATT+TGG | - | chr4.2:9770539-9770558 | MS.gene58134:intron | 40.0% | |
| TGTTTCAACTCCAGTAGAGA+CGG | + | chr4.2:9769432-9769451 | None:intergenic | 40.0% | |
| TTCCTAAACCTTGTCATGAC+AGG | + | chr4.2:9770777-9770796 | None:intergenic | 40.0% | |
| TTCGTTTCTGTAGGCAAACA+TGG | - | chr4.2:9767786-9767805 | MS.gene58134:CDS | 40.0% | |
| TTGGAAAGTGAATGTGGTAG+GGG | - | chr4.2:9772064-9772083 | MS.gene58134:intron | 40.0% | |
| ! | AGCACCAACATATTTTCCTC+AGG | + | chr4.2:9771429-9771448 | None:intergenic | 40.0% |
| ! | ATGCGTTTTGTGTTAGGGTT+TGG | - | chr4.2:9768011-9768030 | MS.gene58134:intron | 40.0% |
| ! | CTTCGATCGATTCTCTTTCA+TGG | - | chr4.2:9767693-9767712 | MS.gene58134:CDS | 40.0% |
| ! | GAGGAAAATATGTTGGTGCT+TGG | - | chr4.2:9771429-9771448 | MS.gene58134:intron | 40.0% |
| ! | GCACTGTAATTGTGCACTTT+TGG | - | chr4.2:9770281-9770300 | MS.gene58134:intron | 40.0% |
| ! | TGCGTTTTGTGTTAGGGTTT+GGG | - | chr4.2:9768012-9768031 | MS.gene58134:intron | 40.0% |
| ! | TTATGGATTGCTAGAGTTGG+TGG | - | chr4.2:9770202-9770221 | MS.gene58134:intron | 40.0% |
| ! | TTTAGAGCTGTCAAACTCTC+TGG | - | chr4.2:9770513-9770532 | MS.gene58134:intron | 40.0% |
| !! | CATTGCTATCCTTTGCTGTT+TGG | + | chr4.2:9772251-9772270 | None:intergenic | 40.0% |
| !! | GATTGGTAGGTTTAGGGTTT+TGG | - | chr4.2:9768047-9768066 | MS.gene58134:intron | 40.0% |
| !! | GTTGTTTTGTCTAAACGACG+CGG | - | chr4.2:9767958-9767977 | MS.gene58134:intron | 40.0% |
| !! | TGAGAAGCATCTGTCTGATA+TGG | - | chr4.2:9772170-9772189 | MS.gene58134:CDS | 40.0% |
| !!! | CCTACTGATTTTATTCCGGT+AGG | - | chr4.2:9771290-9771309 | MS.gene58134:CDS | 40.0% |
| !!! | TCTGTTTTGAAGCCAAAGCA+TGG | - | chr4.2:9767914-9767933 | MS.gene58134:intron | 40.0% |
| AATCTTTGCAACCAGAGCCT+TGG | + | chr4.2:9772202-9772221 | None:intergenic | 45.0% | |
| AGTAGAGACGGAATATCTGC+AGG | + | chr4.2:9769420-9769439 | None:intergenic | 45.0% | |
| ATCACAGGCTGTAACAGCTA+TGG | - | chr4.2:9768666-9768685 | MS.gene58134:intron | 45.0% | |
| ATTATGTGTGAAGGGCAACC+AGG | - | chr4.2:9770739-9770758 | MS.gene58134:CDS | 45.0% | |
| CCCCTGTTCTTCCTTAATCT+TGG | + | chr4.2:9768939-9768958 | None:intergenic | 45.0% | |
| CCTACCACATTCACTTTCCA+AGG | + | chr4.2:9772065-9772084 | None:intergenic | 45.0% | |
| CCTTGGAAAGTGAATGTGGT+AGG | - | chr4.2:9772062-9772081 | MS.gene58134:intron | 45.0% | |
| CGATTTCACAGTCAGTGAAG+TGG | + | chr4.2:9771059-9771078 | None:intergenic | 45.0% | |
| CTCCTGTCATGACAAGGTTT+AGG | - | chr4.2:9770772-9770791 | MS.gene58134:intron | 45.0% | |
| GCTGTCAAACTCTCTGGTTA+TGG | - | chr4.2:9770519-9770538 | MS.gene58134:intron | 45.0% | |
| GGAGAAACTGCTTGATCTTG+TGG | - | chr4.2:9772299-9772318 | MS.gene58134:intron | 45.0% | |
| TAACTCATGGGCAGCAAACT+TGG | - | chr4.2:9772278-9772297 | MS.gene58134:intron | 45.0% | |
| TATGGTTGTTACCAAGGCTC+TGG | - | chr4.2:9772188-9772207 | MS.gene58134:CDS | 45.0% | |
| TCACCATGGAAGTCATCCAA+TGG | - | chr4.2:9771656-9771675 | MS.gene58134:intron | 45.0% | |
| TGAATGTGGTAGGGGAATTG+TGG | - | chr4.2:9772072-9772091 | MS.gene58134:intron | 45.0% | |
| TGAGATTGAGAGAGCTAGGT+TGG | - | chr4.2:9768901-9768920 | MS.gene58134:intron | 45.0% | |
| TGCAGATATTCCGTCTCTAC+TGG | - | chr4.2:9769419-9769438 | MS.gene58134:intron | 45.0% | |
| TGGTCACAGTGGAGTATATG+TGG | - | chr4.2:9770987-9771006 | MS.gene58134:intron | 45.0% | |
| TGGTTCCAAAGACGAAAGTG+CGG | - | chr4.2:9769971-9769990 | MS.gene58134:intron | 45.0% | |
| TGTAACAGCTATGGTACAGC+AGG | - | chr4.2:9768675-9768694 | MS.gene58134:intron | 45.0% | |
| TGTACCTGTTACACGTGTCT+AGG | - | chr4.2:9771614-9771633 | MS.gene58134:intron | 45.0% | |
| TGTCCATTGGATGACTTCCA+TGG | + | chr4.2:9771662-9771681 | None:intergenic | 45.0% | |
| TTTGACAATGAGATGGCCTC+TGG | - | chr4.2:9771709-9771728 | MS.gene58134:intron | 45.0% | |
| TTTGTGCACGGACATAATCC+TGG | + | chr4.2:9769302-9769321 | None:intergenic | 45.0% | |
| ! | CAAAGCTGCTTTATGGACCA+TGG | + | chr4.2:9772355-9772374 | None:intergenic | 45.0% |
| ! | CGGATTGGAGTACATGTTTG+TGG | - | chr4.2:9769991-9770010 | MS.gene58134:intron | 45.0% |
| ! | GGTCCATAAAGCAGCTTTGA+AGG | - | chr4.2:9772356-9772375 | MS.gene58134:intron | 45.0% |
| !! | GGTGGAAACTTTTGGTGCAA+TGG | - | chr4.2:9769115-9769134 | MS.gene58134:intron | 45.0% |
| !!! | TAGGCTACTTTTGAAGCAGC+TGG | - | chr4.2:9771633-9771652 | MS.gene58134:intron | 45.0% |
| AGAACAGGGGCTTATAGCTG+AGG | - | chr4.2:9768949-9768968 | MS.gene58134:intron | 50.0% | |
| CCAATCCGCACTTTCGTCTT+TGG | + | chr4.2:9769979-9769998 | None:intergenic | 50.0% | |
| GAACAGTGTATCTGCTGGGA+AGG | - | chr4.2:9768759-9768778 | MS.gene58134:intron | 50.0% | |
| GAGAAACAAATGCGTCTCGC+CGG | - | chr4.2:9767847-9767866 | MS.gene58134:CDS | 50.0% | |
| GCAGTCAGACAGACAGTCAT+TGG | + | chr4.2:9769768-9769787 | None:intergenic | 50.0% | |
| GGCGTGAGATTAACAGGGAA+GGG | + | chr4.2:9767751-9767770 | None:intergenic | 50.0% | |
| GTAGCCTAGACACGTGTAAC+AGG | + | chr4.2:9771621-9771640 | None:intergenic | 50.0% | |
| TGGCGTGAGATTAACAGGGA+AGG | + | chr4.2:9767752-9767771 | None:intergenic | 50.0% | |
| ! | CCAAAGACGAAAGTGCGGAT+TGG | - | chr4.2:9769976-9769995 | MS.gene58134:intron | 50.0% |
| ! | GCTTTTGTGTCTCAGCCTAG+AGG | - | chr4.2:9771954-9771973 | MS.gene58134:intron | 50.0% |
| ! | TTTGAAGCAGCTGGTCACCA+TGG | - | chr4.2:9771642-9771661 | MS.gene58134:intron | 50.0% |
| !! | TCTAGTGCCGACTATTTCGC+CGG | + | chr4.2:9767869-9767888 | None:intergenic | 50.0% |
| GGACATAATCCTGGCGGTCT+AGG | + | chr4.2:9769293-9769312 | None:intergenic | 55.0% | |
| GTGCACGGACATAATCCTGG+CGG | + | chr4.2:9769299-9769318 | None:intergenic | 55.0% | |
| ! | CTGGACTGCATCGGTGAATG+TGG | + | chr4.2:9771463-9771482 | None:intergenic | 55.0% |
| !! | GACAGGAGTTTTGTAGCGCC+TGG | + | chr4.2:9770760-9770779 | None:intergenic | 55.0% |
| CGTCTCGCCGGCGAAATAGT+CGG | - | chr4.2:9767859-9767878 | MS.gene58134:CDS | 60.0% | |
| TCGATTGTGCCTAGACCGCC+AGG | - | chr4.2:9769281-9769300 | MS.gene58134:intron | 60.0% | |
| ACGACGCGGTCAGCTCAAGC+AGG | - | chr4.2:9767972-9767991 | MS.gene58134:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 9767685 | 9772383 | 9767685 | ID=MS.gene58134 |
| chr4.2 | mRNA | 9767685 | 9772383 | 9767685 | ID=MS.gene58134.t1;Parent=MS.gene58134 |
| chr4.2 | exon | 9772381 | 9772383 | 9772381 | ID=MS.gene58134.t1.exon1;Parent=MS.gene58134.t1 |
| chr4.2 | CDS | 9772381 | 9772383 | 9772381 | ID=cds.MS.gene58134.t1;Parent=MS.gene58134.t1 |
| chr4.2 | exon | 9772075 | 9772269 | 9772075 | ID=MS.gene58134.t1.exon2;Parent=MS.gene58134.t1 |
| chr4.2 | CDS | 9772075 | 9772269 | 9772075 | ID=cds.MS.gene58134.t1;Parent=MS.gene58134.t1 |
| chr4.2 | exon | 9771288 | 9771395 | 9771288 | ID=MS.gene58134.t1.exon3;Parent=MS.gene58134.t1 |
| chr4.2 | CDS | 9771288 | 9771395 | 9771288 | ID=cds.MS.gene58134.t1;Parent=MS.gene58134.t1 |
| chr4.2 | exon | 9771071 | 9771175 | 9771071 | ID=MS.gene58134.t1.exon4;Parent=MS.gene58134.t1 |
| chr4.2 | CDS | 9771071 | 9771175 | 9771071 | ID=cds.MS.gene58134.t1;Parent=MS.gene58134.t1 |
| chr4.2 | exon | 9770896 | 9770952 | 9770896 | ID=MS.gene58134.t1.exon5;Parent=MS.gene58134.t1 |
| chr4.2 | CDS | 9770896 | 9770952 | 9770896 | ID=cds.MS.gene58134.t1;Parent=MS.gene58134.t1 |
| chr4.2 | exon | 9770593 | 9770789 | 9770593 | ID=MS.gene58134.t1.exon6;Parent=MS.gene58134.t1 |
| chr4.2 | CDS | 9770593 | 9770789 | 9770593 | ID=cds.MS.gene58134.t1;Parent=MS.gene58134.t1 |
| chr4.2 | exon | 9768761 | 9768860 | 9768761 | ID=MS.gene58134.t1.exon7;Parent=MS.gene58134.t1 |
| chr4.2 | CDS | 9768761 | 9768860 | 9768761 | ID=cds.MS.gene58134.t1;Parent=MS.gene58134.t1 |
| chr4.2 | exon | 9768532 | 9768644 | 9768532 | ID=MS.gene58134.t1.exon8;Parent=MS.gene58134.t1 |
| chr4.2 | CDS | 9768532 | 9768644 | 9768532 | ID=cds.MS.gene58134.t1;Parent=MS.gene58134.t1 |
| chr4.2 | exon | 9768282 | 9768432 | 9768282 | ID=MS.gene58134.t1.exon9;Parent=MS.gene58134.t1 |
| chr4.2 | CDS | 9768282 | 9768432 | 9768282 | ID=cds.MS.gene58134.t1;Parent=MS.gene58134.t1 |
| chr4.2 | exon | 9768093 | 9768170 | 9768093 | ID=MS.gene58134.t1.exon10;Parent=MS.gene58134.t1 |
| chr4.2 | CDS | 9768093 | 9768170 | 9768093 | ID=cds.MS.gene58134.t1;Parent=MS.gene58134.t1 |
| chr4.2 | exon | 9767685 | 9767903 | 9767685 | ID=MS.gene58134.t1.exon11;Parent=MS.gene58134.t1 |
| chr4.2 | CDS | 9767685 | 9767903 | 9767685 | ID=cds.MS.gene58134.t1;Parent=MS.gene58134.t1 |
| Gene Sequence |
| Protein sequence |
