Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58136.t1 | XP_003630160.2 | 97.3 | 438 | 12 | 0 | 1 | 438 | 4 | 441 | 7.20E-233 | 816.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58136.t1 | Q9FIB6 | 80.5 | 435 | 84 | 1 | 4 | 437 | 7 | 441 | 7.9e-196 | 684.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58136.t1 | B7FLC5 | 97.3 | 438 | 12 | 0 | 1 | 438 | 4 | 441 | 5.2e-233 | 816.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene58136 | 0.823051 | 1.71E-53 | -1.69E-46 |
| MS.gene049254 | MS.gene58136 | 0.83276 | 7.86E-56 | -1.69E-46 |
| MS.gene049283 | MS.gene58136 | 0.825502 | 4.53E-54 | -1.69E-46 |
| MS.gene049499 | MS.gene58136 | 0.83233 | 1.01E-55 | -1.69E-46 |
| MS.gene049711 | MS.gene58136 | 0.811684 | 6.19E-51 | -1.69E-46 |
| MS.gene050559 | MS.gene58136 | 0.806139 | 9.51E-50 | -1.69E-46 |
| MS.gene050561 | MS.gene58136 | 0.807489 | 4.93E-50 | -1.69E-46 |
| MS.gene050562 | MS.gene58136 | 0.811888 | 5.59E-51 | -1.69E-46 |
| MS.gene051332 | MS.gene58136 | 0.833628 | 4.78E-56 | -1.69E-46 |
| MS.gene051744 | MS.gene58136 | 0.811068 | 8.42E-51 | -1.69E-46 |
| MS.gene051975 | MS.gene58136 | 0.803036 | 4.22E-49 | -1.69E-46 |
| MS.gene052533 | MS.gene58136 | 0.816008 | 6.90E-52 | -1.69E-46 |
| MS.gene052609 | MS.gene58136 | 0.801546 | 8.56E-49 | -1.69E-46 |
| MS.gene053272 | MS.gene58136 | -0.808525 | 2.97E-50 | -1.69E-46 |
| MS.gene054576 | MS.gene58136 | 0.807565 | 4.75E-50 | -1.69E-46 |
| MS.gene054957 | MS.gene58136 | 0.809406 | 1.92E-50 | -1.69E-46 |
| MS.gene055386 | MS.gene58136 | 0.839936 | 1.18E-57 | -1.69E-46 |
| MS.gene055513 | MS.gene58136 | 0.802816 | 4.69E-49 | -1.69E-46 |
| MS.gene055724 | MS.gene58136 | 0.807281 | 5.46E-50 | -1.69E-46 |
| MS.gene056050 | MS.gene58136 | 0.821184 | 4.62E-53 | -1.69E-46 |
| MS.gene056699 | MS.gene58136 | 0.824131 | 9.53E-54 | -1.69E-46 |
| MS.gene05686 | MS.gene58136 | 0.821233 | 4.50E-53 | -1.69E-46 |
| MS.gene057034 | MS.gene58136 | 0.803395 | 3.56E-49 | -1.69E-46 |
| MS.gene057102 | MS.gene58136 | 0.827487 | 1.52E-54 | -1.69E-46 |
| MS.gene057208 | MS.gene58136 | 0.813494 | 2.49E-51 | -1.69E-46 |
| MS.gene05985 | MS.gene58136 | -0.850929 | 1.24E-60 | -1.69E-46 |
| MS.gene060777 | MS.gene58136 | 0.832133 | 1.12E-55 | -1.69E-46 |
| MS.gene060933 | MS.gene58136 | 0.831812 | 1.35E-55 | -1.69E-46 |
| MS.gene060935 | MS.gene58136 | 0.838399 | 2.94E-57 | -1.69E-46 |
| MS.gene060937 | MS.gene58136 | 0.856868 | 2.40E-62 | -1.69E-46 |
| MS.gene061100 | MS.gene58136 | 0.812934 | 3.30E-51 | -1.69E-46 |
| MS.gene061160 | MS.gene58136 | 0.83543 | 1.69E-56 | -1.69E-46 |
| MS.gene061188 | MS.gene58136 | 0.843156 | 1.67E-58 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58136.t1 | MTR_8g092450 | 97.260 | 438 | 12 | 0 | 1 | 438 | 4 | 441 | 0.0 | 868 |
| MS.gene58136.t1 | MTR_8g092390 | 96.575 | 438 | 15 | 0 | 1 | 438 | 1 | 438 | 0.0 | 867 |
| MS.gene58136.t1 | MTR_5g072475 | 47.253 | 91 | 48 | 0 | 98 | 188 | 35 | 125 | 1.10e-14 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58136.t1 | AT5G09900 | 80.460 | 435 | 84 | 1 | 4 | 437 | 7 | 441 | 0.0 | 707 |
| MS.gene58136.t1 | AT5G09900 | 80.460 | 435 | 84 | 1 | 4 | 437 | 7 | 441 | 0.0 | 707 |
| MS.gene58136.t1 | AT5G64760 | 77.701 | 435 | 96 | 1 | 4 | 437 | 7 | 441 | 0.0 | 680 |
| MS.gene58136.t1 | AT5G64760 | 77.701 | 435 | 96 | 1 | 4 | 437 | 7 | 441 | 0.0 | 680 |
| MS.gene58136.t1 | AT5G64760 | 78.385 | 421 | 90 | 1 | 18 | 437 | 1 | 421 | 0.0 | 664 |
| MS.gene58136.t1 | AT5G09900 | 78.698 | 338 | 71 | 1 | 4 | 340 | 7 | 344 | 0.0 | 533 |
Find 84 sgRNAs with CRISPR-Local
Find 239 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATCTTTCTTGAGAGTATT+TGG | 0.210165 | 4.2:+9804090 | None:intergenic |
| GACCATATTATCACCTTCTT+TGG | 0.222140 | 4.2:+9804022 | None:intergenic |
| TGAAATTTGCCGCTGCTATA+AGG | 0.251024 | 4.2:-9802308 | MS.gene58136:CDS |
| CGTTGCTATCCTTTGCTGTT+TGG | 0.293818 | 4.2:+9801247 | None:intergenic |
| TATCTTTCTTGAGAGTATTT+GGG | 0.303298 | 4.2:+9804091 | None:intergenic |
| CTTAAGCTGGCCGCGTCGTT+TGG | 0.310516 | 4.2:+9805045 | None:intergenic |
| AGGATAACATACTGGAAGTT+TGG | 0.319003 | 4.2:+9802019 | None:intergenic |
| TCATCCAATGGACAGCTCTT+TGG | 0.322854 | 4.2:-9801874 | MS.gene58136:CDS |
| TCTTATCAGGTGGAAACTTT+TGG | 0.328587 | 4.2:-9804297 | MS.gene58136:intron |
| CATCCAATGGACAGCTCTTT+GGG | 0.333432 | 4.2:-9801873 | MS.gene58136:CDS |
| CCCCTGTATTTCCTTTATCT+TGG | 0.342383 | 4.2:+9804468 | None:intergenic |
| ACCATATTATCACCTTCTTT+GGG | 0.346638 | 4.2:+9804023 | None:intergenic |
| CAAGAAACTTGCCAAGATAA+AGG | 0.359795 | 4.2:-9804479 | MS.gene58136:CDS |
| ATTCGACATAGATGCATCTA+AGG | 0.393010 | 4.2:-9804057 | MS.gene58136:CDS |
| TAACTCGTGGGCAGCAAACT+TGG | 0.397845 | 4.2:-9801217 | MS.gene58136:CDS |
| AGATCAGACGGCGAAATTGC+CGG | 0.404288 | 4.2:-9805154 | MS.gene58136:CDS |
| TGCTGATATTCCATCTCTAC+TGG | 0.412149 | 4.2:-9803988 | MS.gene58136:CDS |
| GCCCAAAGAAGGTGATAATA+TGG | 0.427248 | 4.2:-9804024 | MS.gene58136:CDS |
| TCAATACGAGTTTCAACATC+TGG | 0.427862 | 4.2:+9804680 | None:intergenic |
| TTCAAGATAATCATTGTTGT+GGG | 0.433017 | 4.2:+9802327 | None:intergenic |
| CAATATATTGCATAGCCTGC+TGG | 0.433604 | 4.2:+9804711 | None:intergenic |
| GCATCTATGTCGAATACTCT+TGG | 0.433663 | 4.2:+9804065 | None:intergenic |
| TGCCAAGATAAAGGAAATAC+AGG | 0.434552 | 4.2:-9804470 | MS.gene58136:CDS |
| TTTGACAATGAGATGGTCTA+TGG | 0.435499 | 4.2:-9801833 | MS.gene58136:CDS |
| GGTTCATAAAGCAGCTTTGA+AGG | 0.436788 | 4.2:-9801139 | MS.gene58136:CDS |
| GGACATGATCCTGGCGGTCT+AGG | 0.445916 | 4.2:+9804117 | None:intergenic |
| ACTATTACGAGCTAATGATT+AGG | 0.458857 | 4.2:-9803953 | MS.gene58136:intron |
| TCTGCTTTGAAGCCAAAGCC+TGG | 0.465047 | 4.2:-9805099 | MS.gene58136:CDS |
| TTTCAAGATAATCATTGTTG+TGG | 0.472189 | 4.2:+9802326 | None:intergenic |
| TATGGTTGTTACCAAGGCTC+TGG | 0.483429 | 4.2:-9801307 | MS.gene58136:CDS |
| GGAGAAGATGCTTGATCTTG+TGG | 0.492893 | 4.2:-9801196 | MS.gene58136:CDS |
| CATCTATGTCGAATACTCTT+GGG | 0.496534 | 4.2:+9804066 | None:intergenic |
| CAAGGTGGAATTTAAAAGAC+TGG | 0.502902 | 4.2:+9802066 | None:intergenic |
| TTTGGGCACGGACATGATCC+TGG | 0.504121 | 4.2:+9804108 | None:intergenic |
| AATCTTTGCAACCAGAGCCT+TGG | 0.507062 | 4.2:+9801296 | None:intergenic |
| GCAAAGATTGACAGACCAAT+GGG | 0.508334 | 4.2:-9801282 | MS.gene58136:CDS |
| TCGACTCTGCCTAGACCGCC+AGG | 0.509366 | 4.2:-9804126 | MS.gene58136:CDS |
| GTTTGGACAAAACGACAATC+TGG | 0.512141 | 4.2:+9805062 | None:intergenic |
| CAACTGGTACCTGCTTAAGC+TGG | 0.513972 | 4.2:+9805032 | None:intergenic |
| TGCTTCAACTCCAGTAGAGA+TGG | 0.518855 | 4.2:+9803978 | None:intergenic |
| TCTCCCAAAGAGCTGTCCAT+TGG | 0.527502 | 4.2:+9801870 | None:intergenic |
| TGTGACAGCGATGGTCCAGC+AGG | 0.529317 | 4.2:-9804726 | MS.gene58136:CDS |
| ACATTGAACAGTGTATCTGC+TGG | 0.532773 | 4.2:-9804647 | MS.gene58136:CDS |
| TGAGATTGAGAGAGCAAGGT+TGG | 0.535070 | 4.2:-9804503 | MS.gene58136:CDS |
| TTGCATCAAATCAGCAGCCT+CGG | 0.540212 | 4.2:+9804438 | None:intergenic |
| CAAAGCTGCTTTATGAACCA+TGG | 0.543033 | 4.2:+9801143 | None:intergenic |
| AGTAGAGATGGAATATCAGC+AGG | 0.547557 | 4.2:+9803990 | None:intergenic |
| ACGACGCGGCCAGCTTAAGC+AGG | 0.547759 | 4.2:-9805041 | MS.gene58136:intron |
| GAAGCTGAGAAGCATCTGTC+CGG | 0.552717 | 4.2:-9801330 | MS.gene58136:CDS |
| CCTACAGGAATAAAATCAGC+AGG | 0.555937 | 4.2:+9802253 | None:intergenic |
| TGGAAACAGACTATTCCCAT+TGG | 0.557174 | 4.2:+9801267 | None:intergenic |
| TGCAAAGATTGACAGACCAA+TGG | 0.572504 | 4.2:-9801283 | MS.gene58136:CDS |
| TGAGAAGCATCTGTCCGGTA+TGG | 0.572589 | 4.2:-9801325 | MS.gene58136:CDS |
| GAGGAAAATATGTTGGTGCT+TGG | 0.574826 | 4.2:-9802116 | MS.gene58136:CDS |
| GTCCGGTATGGTTGTTACCA+AGG | 0.577395 | 4.2:-9801313 | MS.gene58136:CDS |
| GCAACGATGTTCTTAACTCG+TGG | 0.578239 | 4.2:-9801230 | MS.gene58136:CDS |
| TTCTTGAGAGTATTTGGGCA+CGG | 0.586277 | 4.2:+9804096 | None:intergenic |
| GCCAAGATAAAGGAAATACA+GGG | 0.586967 | 4.2:-9804469 | MS.gene58136:CDS |
| ACGTTGAGATTGAGAGAGCA+AGG | 0.591447 | 4.2:-9804507 | MS.gene58136:CDS |
| TTTAAAAGACTGGACTGCAT+CGG | 0.598019 | 4.2:+9802076 | None:intergenic |
| CATTGAACAGTGTATCTGCT+GGG | 0.598121 | 4.2:-9804646 | MS.gene58136:CDS |
| AGATCCTGAGGAAAATATGT+TGG | 0.600984 | 4.2:-9802123 | MS.gene58136:CDS |
| AGATAGATTTCTATCCTCCA+AGG | 0.603704 | 4.2:+9802048 | None:intergenic |
| TTTGAAGCAGCTGGTCACCA+TGG | 0.604172 | 4.2:-9801900 | MS.gene58136:CDS |
| AGCCTTGGTAACAACCATAC+CGG | 0.606298 | 4.2:+9801311 | None:intergenic |
| CAACGATGTTCTTAACTCGT+GGG | 0.607448 | 4.2:-9801229 | MS.gene58136:CDS |
| CATATATTGCCTTATAGCAG+CGG | 0.613022 | 4.2:+9802299 | None:intergenic |
| AGGTGATAATATGGTCGAAG+AGG | 0.618539 | 4.2:-9804015 | MS.gene58136:CDS |
| GAATGAGTTTGACAATGAGA+TGG | 0.628221 | 4.2:-9801840 | MS.gene58136:CDS |
| TCACCATGGAAGTCATCCAA+TGG | 0.630891 | 4.2:-9801886 | MS.gene58136:CDS |
| GAACAGTGTATCTGCTGGGA+AGG | 0.631990 | 4.2:-9804642 | MS.gene58136:intron |
| AGTCTGTTTCCAAACAGCAA+AGG | 0.634017 | 4.2:-9801256 | MS.gene58136:CDS |
| CTGGACTGCATCGGTGAATG+TGG | 0.634478 | 4.2:+9802085 | None:intergenic |
| GAGTTGCAAGATATCGATTG+CGG | 0.635622 | 4.2:+9805120 | None:intergenic |
| GTTCTTACATACAGATCCTG+AGG | 0.637665 | 4.2:-9802135 | MS.gene58136:intron |
| TCAAATACACAAGGAAACCA+TGG | 0.640379 | 4.2:-9801160 | MS.gene58136:CDS |
| GAGAAGCAGATGAGATCAGA+CGG | 0.646168 | 4.2:-9805166 | MS.gene58136:CDS |
| TGATTTGATGCAAGAAATTG+CGG | 0.655673 | 4.2:-9804428 | MS.gene58136:intron |
| CATGCAGGCTGTGACAGCGA+TGG | 0.669127 | 4.2:-9804735 | MS.gene58136:intron |
| GAGCTGTCATCAAATACACA+AGG | 0.670564 | 4.2:-9801169 | MS.gene58136:CDS |
| TAGATTTCTATCCTCCAAGG+TGG | 0.684299 | 4.2:+9802051 | None:intergenic |
| TGTCCATTGGATGACTTCCA+TGG | 0.689019 | 4.2:+9801883 | None:intergenic |
| CCAAGATAAAGGAAATACAG+GGG | 0.720940 | 4.2:-9804468 | MS.gene58136:CDS |
| GGGCACGGACATGATCCTGG+CGG | 0.747981 | 4.2:+9804111 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAACAAATAAAATAAGA+TGG | + | chr4.2:9804953-9804972 | None:intergenic | 10.0% |
| !!! | TAAAAAAATGTCTTTTAAAA+TGG | + | chr4.2:9801782-9801801 | None:intergenic | 10.0% |
| !! | GTTTGTATAAAATAAACTAA+AGG | + | chr4.2:9802508-9802527 | None:intergenic | 15.0% |
| !!! | ACTTTAATAACTTTTTCTTA+TGG | - | chr4.2:9804789-9804808 | MS.gene58136:intron | 15.0% |
| !!! | ATATATCTTTTTTTCGTTTT+TGG | - | chr4.2:9801971-9801990 | MS.gene58136:intron | 15.0% |
| !!! | ATATTTTAACATGATTAGAA+AGG | + | chr4.2:9804365-9804384 | None:intergenic | 15.0% |
| !!! | TAATTAACTGTTTTAATTCT+TGG | - | chr4.2:9802956-9802975 | MS.gene58136:intron | 15.0% |
| !!! | TTTGGTTTTTATATTCAAAT+AGG | + | chr4.2:9802615-9802634 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTCGTTTAGAT+TGG | - | chr4.2:9801398-9801417 | MS.gene58136:intron | 15.0% |
| !! | AAACTAAAATATAGAAAACC+AGG | + | chr4.2:9802559-9802578 | None:intergenic | 20.0% |
| !! | AATTGTTTGCTTAAAATGAT+TGG | - | chr4.2:9801422-9801441 | MS.gene58136:intron | 20.0% |
| !! | ACAGTTAATTAAAAACTTGT+TGG | + | chr4.2:9802947-9802966 | None:intergenic | 20.0% |
| !! | CAATTTGATATTTAGTAACA+AGG | + | chr4.2:9803028-9803047 | None:intergenic | 20.0% |
| !! | CTCGTTTATAAAATTCTAAA+TGG | + | chr4.2:9803439-9803458 | None:intergenic | 20.0% |
| !! | GATTAGTACAAATTATTGTT+TGG | - | chr4.2:9802002-9802021 | MS.gene58136:intron | 20.0% |
| !! | TACTAGAAGATTATGTTATA+CGG | - | chr4.2:9804146-9804165 | MS.gene58136:intron | 20.0% |
| !! | TTAAAGAAAAACTATATCCT+TGG | - | chr4.2:9804828-9804847 | MS.gene58136:intron | 20.0% |
| !! | TTTCAAAATAGTTAAGAACT+GGG | + | chr4.2:9803347-9803366 | None:intergenic | 20.0% |
| !!! | AAAAAAAAGTGTAAGGAATT+CGG | + | chr4.2:9804598-9804617 | None:intergenic | 20.0% |
| !!! | ATTTTAGAATCTGAAAGATA+AGG | - | chr4.2:9802664-9802683 | MS.gene58136:intron | 20.0% |
| !!! | ATTTTTTAGAACAGTATCAA+TGG | + | chr4.2:9803586-9803605 | None:intergenic | 20.0% |
| !!! | CATTTAGAATTTTATAAACG+AGG | - | chr4.2:9803437-9803456 | MS.gene58136:intron | 20.0% |
| !!! | CTAAAATCTTTTAAACCTAA+CGG | + | chr4.2:9801373-9801392 | None:intergenic | 20.0% |
| !!! | GAAACATAAAAAAAAGTGTA+AGG | + | chr4.2:9804605-9804624 | None:intergenic | 20.0% |
| !!! | GATTCTAAAATTAACAGTAT+AGG | + | chr4.2:9802655-9802674 | None:intergenic | 20.0% |
| !!! | TAAAATGATTGGTTTGTTTA+GGG | - | chr4.2:9801433-9801452 | MS.gene58136:intron | 20.0% |
| !!! | TATTTATGGATTATTAGAGT+TGG | - | chr4.2:9803114-9803133 | MS.gene58136:intron | 20.0% |
| !!! | TTAAAATGATTGGTTTGTTT+AGG | - | chr4.2:9801432-9801451 | MS.gene58136:intron | 20.0% |
| !!! | TTTAGTTTCATTAACTTTTG+AGG | - | chr4.2:9802571-9802590 | MS.gene58136:intron | 20.0% |
| !!! | TTTTAAAATGGATTATGCTA+TGG | + | chr4.2:9801770-9801789 | None:intergenic | 20.0% |
| ! | AAATGAAAGTAGAGATGAAA+TGG | + | chr4.2:9803311-9803330 | None:intergenic | 25.0% |
| ! | AAGAAATACTACAACTAAAC+AGG | + | chr4.2:9802432-9802451 | None:intergenic | 25.0% |
| ! | AAGGATGAAAGATGAAAAAT+AGG | + | chr4.2:9804346-9804365 | None:intergenic | 25.0% |
| ! | AGAAGTAAGTGATTAAAATG+TGG | + | chr4.2:9803261-9803280 | None:intergenic | 25.0% |
| ! | AGTAATGTAGAGTAAAGAAT+TGG | - | chr4.2:9803769-9803788 | MS.gene58136:intron | 25.0% |
| ! | CATAAGGAAAAAAAAAGTCA+GGG | + | chr4.2:9803963-9803982 | None:intergenic | 25.0% |
| ! | CTGTATGTAAGAACAATATT+CGG | + | chr4.2:9804201-9804220 | None:intergenic | 25.0% |
| ! | GTTTCAAAATAGTTAAGAAC+TGG | + | chr4.2:9803348-9803367 | None:intergenic | 25.0% |
| ! | TACAACAAGAATATTCTGAA+AGG | + | chr4.2:9804668-9804687 | None:intergenic | 25.0% |
| ! | TCTTCTATGTTAAATTGTGT+AGG | - | chr4.2:9802192-9802211 | MS.gene58136:intron | 25.0% |
| ! | TGAAAAATAGGATAACATAC+TGG | + | chr4.2:9804334-9804353 | None:intergenic | 25.0% |
| ! | TTATGCACGAGTAATTAATT+AGG | + | chr4.2:9804987-9805006 | None:intergenic | 25.0% |
| ! | TTCAAGATAATCATTGTTGT+GGG | + | chr4.2:9804018-9804037 | None:intergenic | 25.0% |
| ! | TTTCAAGATAATCATTGTTG+TGG | + | chr4.2:9804019-9804038 | None:intergenic | 25.0% |
| ! | TTTGTATGATTGGTACAAAA+AGG | - | chr4.2:9801559-9801578 | MS.gene58136:intron | 25.0% |
| !! | AACTTTGGAAATTTAGGAAT+CGG | + | chr4.2:9803286-9803305 | None:intergenic | 25.0% |
| !! | AAGTTCAAACTCGTTTTATA+TGG | + | chr4.2:9803505-9803524 | None:intergenic | 25.0% |
| !! | ATGGATAACTTTGGAAATTT+AGG | + | chr4.2:9803292-9803311 | None:intergenic | 25.0% |
| !! | CGTTAGGTTTAAAAGATTTT+AGG | - | chr4.2:9801371-9801390 | MS.gene58136:intron | 25.0% |
| !! | CTCCTTTTTATCTATATCTA+CGG | - | chr4.2:9802836-9802855 | MS.gene58136:intron | 25.0% |
| !! | TCCTTTTTATCTATATCTAC+GGG | - | chr4.2:9802837-9802856 | MS.gene58136:intron | 25.0% |
| !! | TTTTCTATATTACGTAAGTG+CGG | - | chr4.2:9802889-9802908 | MS.gene58136:intron | 25.0% |
| !!! | AATAACTTTTTCTTATGGTG+TGG | - | chr4.2:9804794-9804813 | MS.gene58136:intron | 25.0% |
| !!! | ATAACTTTTTCTTATGGTGT+GGG | - | chr4.2:9804795-9804814 | MS.gene58136:intron | 25.0% |
| !!! | GCTTTAAACTCTAAAATGAT+TGG | - | chr4.2:9801465-9801484 | MS.gene58136:intron | 25.0% |
| !!! | TATCTTTCTTGAGAGTATTT+GGG | + | chr4.2:9802254-9802273 | None:intergenic | 25.0% |
| !!! | TGTTTTAATTCTTGGTTTGA+TGG | - | chr4.2:9802964-9802983 | MS.gene58136:intron | 25.0% |
| !!! | TTATCTTTCTTGAGAGTATT+TGG | + | chr4.2:9802255-9802274 | None:intergenic | 25.0% |
| AAATAAGATGGAAGACCAAT+AGG | + | chr4.2:9804941-9804960 | None:intergenic | 30.0% | |
| ACCATATTATCACCTTCTTT+GGG | + | chr4.2:9802322-9802341 | None:intergenic | 30.0% | |
| ACTATTACGAGCTAATGATT+AGG | - | chr4.2:9802389-9802408 | MS.gene58136:intron | 30.0% | |
| AGAGATGAAATGGATAACTT+TGG | + | chr4.2:9803301-9803320 | None:intergenic | 30.0% | |
| AGCAGCATAAATATAAACGA+CGG | + | chr4.2:9803689-9803708 | None:intergenic | 30.0% | |
| AGTAAGAAATATCATGAACC+AGG | + | chr4.2:9803935-9803954 | None:intergenic | 30.0% | |
| AGTATCAATGGTAAAAGACA+AGG | + | chr4.2:9803574-9803593 | None:intergenic | 30.0% | |
| AGTCCTGTTTATTTGTGTTT+GGG | - | chr4.2:9803718-9803737 | MS.gene58136:intron | 30.0% | |
| CGTAGATATAGATAAAAAGG+AGG | + | chr4.2:9802838-9802857 | None:intergenic | 30.0% | |
| GAGAAGATGATAAAACAGTA+TGG | + | chr4.2:9801748-9801767 | None:intergenic | 30.0% | |
| GCATAAGGAAAAAAAAAGTC+AGG | + | chr4.2:9803964-9803983 | None:intergenic | 30.0% | |
| GCTATTATATATATGCATGC+AGG | - | chr4.2:9801592-9801611 | MS.gene58136:intron | 30.0% | |
| GTAGATACTCTAAATTATCC+TGG | - | chr4.2:9802538-9802557 | MS.gene58136:intron | 30.0% | |
| TAACAGAACAAAACCATAAC+TGG | + | chr4.2:9804764-9804783 | None:intergenic | 30.0% | |
| TAATTACTCGTGCATAATTC+AGG | - | chr4.2:9804990-9805009 | MS.gene58136:intron | 30.0% | |
| TCCCGTAGATATAGATAAAA+AGG | + | chr4.2:9802841-9802860 | None:intergenic | 30.0% | |
| TGATTTGATGCAAGAAATTG+CGG | - | chr4.2:9801914-9801933 | MS.gene58136:intron | 30.0% | |
| ! | AATTTTCTCAGTTTTTGCCA+TGG | + | chr4.2:9802073-9802092 | None:intergenic | 30.0% |
| ! | GCTAACTTGTACTGTATTTA+TGG | - | chr4.2:9803100-9803119 | MS.gene58136:intron | 30.0% |
| ! | GTTTAGAATTCCTTGTCATT+GGG | - | chr4.2:9804388-9804407 | MS.gene58136:intron | 30.0% |
| ! | GTTTGGTTTACTTATGTGAT+GGG | - | chr4.2:9802019-9802038 | MS.gene58136:intron | 30.0% |
| ! | TGTTTAGAATTCCTTGTCAT+TGG | - | chr4.2:9804387-9804406 | MS.gene58136:intron | 30.0% |
| ! | TGTTTGGTTTACTTATGTGA+TGG | - | chr4.2:9802018-9802037 | MS.gene58136:intron | 30.0% |
| ! | TTATGGATTATTAGAGTTGG+AGG | - | chr4.2:9803117-9803136 | MS.gene58136:intron | 30.0% |
| !! | CTATGATTTGTTTCTATGCT+TGG | - | chr4.2:9802861-9802880 | MS.gene58136:intron | 30.0% |
| !! | CTTTTTCGTGTTAGGAATTA+GGG | - | chr4.2:9801344-9801363 | MS.gene58136:intron | 30.0% |
| !! | GAACTTTAGAATAAACTTGC+TGG | - | chr4.2:9803519-9803538 | MS.gene58136:intron | 30.0% |
| !! | TAGAATAAACTTGCTGGATT+TGG | - | chr4.2:9803525-9803544 | MS.gene58136:intron | 30.0% |
| !!! | CTGCATCTTTTTTGTATGAT+TGG | - | chr4.2:9801549-9801568 | MS.gene58136:intron | 30.0% |
| !!! | GACTTTTTTTTTCCTTATGC+TGG | - | chr4.2:9803964-9803983 | MS.gene58136:CDS | 30.0% |
| AAAGAGAATAGAAAGCCTAC+AGG | + | chr4.2:9804107-9804126 | None:intergenic | 35.0% | |
| AACCCAAGTTTAGAAAGCTA+TGG | + | chr4.2:9803826-9803845 | None:intergenic | 35.0% | |
| AAGGAATCCAAATGTTAGGA+AGG | + | chr4.2:9803555-9803574 | None:intergenic | 35.0% | |
| AATATCATGAACCAGGTACT+AGG | + | chr4.2:9803928-9803947 | None:intergenic | 35.0% | |
| AATTTGAGTAAACGCAAGCA+AGG | + | chr4.2:9802768-9802787 | None:intergenic | 35.0% | |
| ACCCAAGTTTAGAAAGCTAT+GGG | + | chr4.2:9803825-9803844 | None:intergenic | 35.0% | |
| ACTATATCCTTGGAAAGTGA+AGG | - | chr4.2:9804838-9804857 | MS.gene58136:intron | 35.0% | |
| AGACAAGGAATCCAAATGTT+AGG | + | chr4.2:9803559-9803578 | None:intergenic | 35.0% | |
| AGATAGATTTCTATCCTCCA+AGG | + | chr4.2:9804297-9804316 | None:intergenic | 35.0% | |
| AGATCCTGAGGAAAATATGT+TGG | - | chr4.2:9804219-9804238 | MS.gene58136:intron | 35.0% | |
| AGGATAACATACTGGAAGTT+TGG | + | chr4.2:9804326-9804345 | None:intergenic | 35.0% | |
| AGTTAGCTACCTAAGAAACT+TGG | + | chr4.2:9803087-9803106 | None:intergenic | 35.0% | |
| ATTCGACATAGATGCATCTA+AGG | - | chr4.2:9802285-9802304 | MS.gene58136:CDS | 35.0% | |
| CAAGAAACTTGCCAAGATAA+AGG | - | chr4.2:9801863-9801882 | MS.gene58136:CDS | 35.0% | |
| CAAGGTGGAATTTAAAAGAC+TGG | + | chr4.2:9804279-9804298 | None:intergenic | 35.0% | |
| CATATATTGCCTTATAGCAG+CGG | + | chr4.2:9804046-9804065 | None:intergenic | 35.0% | |
| CATCCCAAACACAAATAAAC+AGG | + | chr4.2:9803724-9803743 | None:intergenic | 35.0% | |
| CATCTATGTCGAATACTCTT+GGG | + | chr4.2:9802279-9802298 | None:intergenic | 35.0% | |
| CCAAGATAAAGGAAATACAG+GGG | - | chr4.2:9801874-9801893 | MS.gene58136:CDS | 35.0% | |
| CCTAACAATCCAAGTTTCTT+AGG | - | chr4.2:9803075-9803094 | MS.gene58136:intron | 35.0% | |
| CCTAAGAAACTTGGATTGTT+AGG | + | chr4.2:9803078-9803097 | None:intergenic | 35.0% | |
| CCTAATTCCTAACACGAAAA+AGG | + | chr4.2:9801346-9801365 | None:intergenic | 35.0% | |
| GAAAAGAAAAAGCCCAAAGA+AGG | - | chr4.2:9802307-9802326 | MS.gene58136:CDS | 35.0% | |
| GAATGAGTTTGACAATGAGA+TGG | - | chr4.2:9804502-9804521 | MS.gene58136:CDS | 35.0% | |
| GACATTCATGCATCATTGTT+TGG | + | chr4.2:9802633-9802652 | None:intergenic | 35.0% | |
| GACCATATTATCACCTTCTT+TGG | + | chr4.2:9802323-9802342 | None:intergenic | 35.0% | |
| GAGTCCTGTTTATTTGTGTT+TGG | - | chr4.2:9803717-9803736 | MS.gene58136:intron | 35.0% | |
| GCCAAGATAAAGGAAATACA+GGG | - | chr4.2:9801873-9801892 | MS.gene58136:CDS | 35.0% | |
| GTAAACCTGTAACTACCTAT+TGG | - | chr4.2:9804923-9804942 | MS.gene58136:intron | 35.0% | |
| TAAAATTGCAGTCAGACAGA+CGG | + | chr4.2:9802704-9802723 | None:intergenic | 35.0% | |
| TATATTACGTAAGTGCGGAT+TGG | - | chr4.2:9802894-9802913 | MS.gene58136:intron | 35.0% | |
| TCAAATACACAAGGAAACCA+TGG | - | chr4.2:9805182-9805201 | MS.gene58136:CDS | 35.0% | |
| TCAATACGAGTTTCAACATC+TGG | + | chr4.2:9801665-9801684 | None:intergenic | 35.0% | |
| TGCCAAGATAAAGGAAATAC+AGG | - | chr4.2:9801872-9801891 | MS.gene58136:CDS | 35.0% | |
| TGGTTATCCTTCCTAACATT+TGG | - | chr4.2:9803545-9803564 | MS.gene58136:intron | 35.0% | |
| TTTAAAAGACTGGACTGCAT+CGG | + | chr4.2:9804269-9804288 | None:intergenic | 35.0% | |
| TTTGACAATGAGATGGTCTA+TGG | - | chr4.2:9804509-9804528 | MS.gene58136:CDS | 35.0% | |
| ! | ACTAGTAGTTACAAGTACTG+TGG | - | chr4.2:9802461-9802480 | MS.gene58136:intron | 35.0% |
| ! | ATCAGCAGGATTTTCTTTGA+TGG | + | chr4.2:9804078-9804097 | None:intergenic | 35.0% |
| ! | CAACAACTATTTTCACATGC+AGG | + | chr4.2:9804904-9804923 | None:intergenic | 35.0% |
| ! | CAGTCTTTTAAATTCCACCT+TGG | - | chr4.2:9804277-9804296 | MS.gene58136:CDS | 35.0% |
| ! | CTACATATTTTCCTAGTACC+TGG | - | chr4.2:9803914-9803933 | MS.gene58136:intron | 35.0% |
| ! | GGTTTTCTGTCTGTGATTTT+AGG | - | chr4.2:9803985-9804004 | MS.gene58136:CDS | 35.0% |
| ! | TCTAAAATGATTGGTGCAGT+TGG | - | chr4.2:9801474-9801493 | MS.gene58136:intron | 35.0% |
| ! | TCTTATCAGGTGGAAACTTT+TGG | - | chr4.2:9802045-9802064 | MS.gene58136:CDS | 35.0% |
| ! | TCTTTTAAATTCCACCTTGG+AGG | - | chr4.2:9804280-9804299 | MS.gene58136:CDS | 35.0% |
| !! | AAAAGGCATCAATTTGCAAC+TGG | + | chr4.2:9801329-9801348 | None:intergenic | 35.0% |
| !! | AAACGACGGTTGATAAGAAT+TGG | + | chr4.2:9803675-9803694 | None:intergenic | 35.0% |
| !! | AAAGCAGCTTTGAAGGTTTA+AGG | - | chr4.2:9805210-9805229 | MS.gene58136:CDS | 35.0% |
| !! | ATGTGATGGGTAATCTTATC+AGG | - | chr4.2:9802032-9802051 | MS.gene58136:CDS | 35.0% |
| !! | ATTGATGCCTTTTTCGTGTT+AGG | - | chr4.2:9801336-9801355 | MS.gene58136:intron | 35.0% |
| !! | CCTTTTTCGTGTTAGGAATT+AGG | - | chr4.2:9801343-9801362 | MS.gene58136:intron | 35.0% |
| !! | GGTACAAAAAGGTATTAACG+AGG | - | chr4.2:9801570-9801589 | MS.gene58136:intron | 35.0% |
| ACAGACAGAAAACCAGCATA+AGG | + | chr4.2:9803979-9803998 | None:intergenic | 40.0% | |
| ACATTGAACAGTGTATCTGC+TGG | - | chr4.2:9801695-9801714 | MS.gene58136:intron | 40.0% | |
| AGGTGATAATATGGTCGAAG+AGG | - | chr4.2:9802327-9802346 | MS.gene58136:CDS | 40.0% | |
| AGTAGAGATGGAATATCAGC+AGG | + | chr4.2:9802355-9802374 | None:intergenic | 40.0% | |
| AGTCTGTTTCCAAACAGCAA+AGG | - | chr4.2:9805086-9805105 | MS.gene58136:CDS | 40.0% | |
| CAATATATTGCATAGCCTGC+TGG | + | chr4.2:9801634-9801653 | None:intergenic | 40.0% | |
| CATTGAACAGTGTATCTGCT+GGG | - | chr4.2:9801696-9801715 | MS.gene58136:intron | 40.0% | |
| CCCAAGTTTAGAAAGCTATG+GGG | + | chr4.2:9803824-9803843 | None:intergenic | 40.0% | |
| CCCCATAGCTTTCTAAACTT+GGG | - | chr4.2:9803821-9803840 | MS.gene58136:intron | 40.0% | |
| CCCCTGTATTTCCTTTATCT+TGG | + | chr4.2:9801877-9801896 | None:intergenic | 40.0% | |
| CCTACAGGAATAAAATCAGC+AGG | + | chr4.2:9804092-9804111 | None:intergenic | 40.0% | |
| CTTGGAAAGTGAAGGTAGTA+GGG | - | chr4.2:9804846-9804865 | MS.gene58136:intron | 40.0% | |
| GAAGACCAATAGGTAGTTAC+AGG | + | chr4.2:9804931-9804950 | None:intergenic | 40.0% | |
| GAGCTGTCATCAAATACACA+AGG | - | chr4.2:9805173-9805192 | MS.gene58136:CDS | 40.0% | |
| GAGTAAAGAATTGGTCACAG+TGG | - | chr4.2:9803778-9803797 | MS.gene58136:intron | 40.0% | |
| GCAAAGATTGACAGACCAAT+GGG | - | chr4.2:9805060-9805079 | MS.gene58136:CDS | 40.0% | |
| GCATCTATGTCGAATACTCT+TGG | + | chr4.2:9802280-9802299 | None:intergenic | 40.0% | |
| GCCCAAAGAAGGTGATAATA+TGG | - | chr4.2:9802318-9802337 | MS.gene58136:CDS | 40.0% | |
| GCCTAGACACAACATATAAC+AGG | + | chr4.2:9804418-9804437 | None:intergenic | 40.0% | |
| GCCTGTTATATGTTGTGTCT+AGG | - | chr4.2:9804414-9804433 | MS.gene58136:intron | 40.0% | |
| GTTCTTACATACAGATCCTG+AGG | - | chr4.2:9804207-9804226 | MS.gene58136:intron | 40.0% | |
| GTTTGGACAAAACGACAATC+TGG | + | chr4.2:9801283-9801302 | None:intergenic | 40.0% | |
| TAGATTTCTATCCTCCAAGG+TGG | + | chr4.2:9804294-9804313 | None:intergenic | 40.0% | |
| TAGGAATTAGGGTTTCCGTT+AGG | - | chr4.2:9801355-9801374 | MS.gene58136:intron | 40.0% | |
| TCCCCATAGCTTTCTAAACT+TGG | - | chr4.2:9803820-9803839 | MS.gene58136:intron | 40.0% | |
| TGAAATTTGCCGCTGCTATA+AGG | - | chr4.2:9804034-9804053 | MS.gene58136:CDS | 40.0% | |
| TGCAAAGATTGACAGACCAA+TGG | - | chr4.2:9805059-9805078 | MS.gene58136:CDS | 40.0% | |
| TGCTGATATTCCATCTCTAC+TGG | - | chr4.2:9802354-9802373 | MS.gene58136:intron | 40.0% | |
| TGGAAACAGACTATTCCCAT+TGG | + | chr4.2:9805078-9805097 | None:intergenic | 40.0% | |
| TGGATTATTAGAGTTGGAGG+TGG | - | chr4.2:9803120-9803139 | MS.gene58136:intron | 40.0% | |
| TTGGAAAGTGAAGGTAGTAG+GGG | - | chr4.2:9804847-9804866 | MS.gene58136:intron | 40.0% | |
| ! | AGCACCAACATATTTTCCTC+AGG | + | chr4.2:9804226-9804245 | None:intergenic | 40.0% |
| ! | ATTTAGCGTTTTCCAGGCTT+TGG | + | chr4.2:9801258-9801277 | None:intergenic | 40.0% |
| ! | CAAAGCTGCTTTATGAACCA+TGG | + | chr4.2:9805202-9805221 | None:intergenic | 40.0% |
| ! | GAGGAAAATATGTTGGTGCT+TGG | - | chr4.2:9804226-9804245 | MS.gene58136:intron | 40.0% |
| ! | GAGTTGCAAGATATCGATTG+CGG | + | chr4.2:9801225-9801244 | None:intergenic | 40.0% |
| ! | GCACTGTGATTGGACATTTT+TGG | - | chr4.2:9803203-9803222 | MS.gene58136:intron | 40.0% |
| ! | GCAGGATTTTCTTTGATGGA+CGG | + | chr4.2:9804074-9804093 | None:intergenic | 40.0% |
| ! | GGTTCATAAAGCAGCTTTGA+AGG | - | chr4.2:9805203-9805222 | MS.gene58136:CDS | 40.0% |
| ! | TGAGGATATGCTTTTGATGC+TGG | - | chr4.2:9802589-9802608 | MS.gene58136:intron | 40.0% |
| ! | TGATGGGTAATCTTATCAGG+TGG | - | chr4.2:9802035-9802054 | MS.gene58136:CDS | 40.0% |
| !! | TTCTTGAGAGTATTTGGGCA+CGG | + | chr4.2:9802249-9802268 | None:intergenic | 40.0% |
| !!! | CCTGCTGATTTTATTCCTGT+AGG | - | chr4.2:9804089-9804108 | MS.gene58136:CDS | 40.0% |
| AACTGGCATTACACACCTCT+AGG | + | chr4.2:9804747-9804766 | None:intergenic | 45.0% | |
| AATCTTTGCAACCAGAGCCT+TGG | + | chr4.2:9805049-9805068 | None:intergenic | 45.0% | |
| ACGTTGAGATTGAGAGAGCA+AGG | - | chr4.2:9801835-9801854 | MS.gene58136:CDS | 45.0% | |
| CATCCAATGGACAGCTCTTT+GGG | - | chr4.2:9804469-9804488 | MS.gene58136:CDS | 45.0% | |
| CCTACTACCTTCACTTTCCA+AGG | + | chr4.2:9804848-9804867 | None:intergenic | 45.0% | |
| CCTTGGAAAGTGAAGGTAGT+AGG | - | chr4.2:9804845-9804864 | MS.gene58136:intron | 45.0% | |
| CGATTTCACAGTCAGTGAAG+TGG | + | chr4.2:9803861-9803880 | None:intergenic | 45.0% | |
| GAGAAGCAGATGAGATCAGA+CGG | - | chr4.2:9801176-9801195 | MS.gene58136:CDS | 45.0% | |
| GAGGTGTGTAATGCCAGTTA+TGG | - | chr4.2:9804748-9804767 | MS.gene58136:intron | 45.0% | |
| GGAGAAGATGCTTGATCTTG+TGG | - | chr4.2:9805146-9805165 | MS.gene58136:CDS | 45.0% | |
| TATGGTTGTTACCAAGGCTC+TGG | - | chr4.2:9805035-9805054 | MS.gene58136:intron | 45.0% | |
| TCACCATGGAAGTCATCCAA+TGG | - | chr4.2:9804456-9804475 | MS.gene58136:CDS | 45.0% | |
| TCATCCAATGGACAGCTCTT+TGG | - | chr4.2:9804468-9804487 | MS.gene58136:CDS | 45.0% | |
| TGAAGGTAGTAGGGGAATTG+TGG | - | chr4.2:9804855-9804874 | MS.gene58136:intron | 45.0% | |
| TGAGATTGAGAGAGCAAGGT+TGG | - | chr4.2:9801839-9801858 | MS.gene58136:CDS | 45.0% | |
| TGCTTCAACTCCAGTAGAGA+TGG | + | chr4.2:9802367-9802386 | None:intergenic | 45.0% | |
| TGGTCACAGTGGAGTATATG+TGG | - | chr4.2:9803789-9803808 | MS.gene58136:intron | 45.0% | |
| TGTCCATTGGATGACTTCCA+TGG | + | chr4.2:9804462-9804481 | None:intergenic | 45.0% | |
| TTGCATCAAATCAGCAGCCT+CGG | + | chr4.2:9801907-9801926 | None:intergenic | 45.0% | |
| ! | AGCCTTGGTAACAACCATAC+CGG | + | chr4.2:9805034-9805053 | None:intergenic | 45.0% |
| ! | CGGATTGGAGTACATGTTTG+TGG | - | chr4.2:9802909-9802928 | MS.gene58136:intron | 45.0% |
| ! | CTGGTCATTTAGCGTTTTCC+AGG | + | chr4.2:9801264-9801283 | None:intergenic | 45.0% |
| ! | TGGACAGAGTCTAGGGTTTA+AGG | - | chr4.2:9801494-9801513 | MS.gene58136:intron | 45.0% |
| !! | CGTTGCTATCCTTTGCTGTT+TGG | + | chr4.2:9805098-9805117 | None:intergenic | 45.0% |
| !!! | TAGGCTACTTTTGAAGCAGC+TGG | - | chr4.2:9804433-9804452 | MS.gene58136:CDS | 45.0% |
| !!! | TATTTTATTTGTTTTTTAAT+GGG | - | chr4.2:9804956-9804975 | MS.gene58136:intron | 5.0% |
| !!! | TTATTTTATTTGTTTTTTAA+TGG | - | chr4.2:9804955-9804974 | MS.gene58136:intron | 5.0% |
| AACAGGCACACCCAATGACA+AGG | + | chr4.2:9804401-9804420 | None:intergenic | 50.0% | |
| AGATCAGACGGCGAAATTGC+CGG | - | chr4.2:9801188-9801207 | MS.gene58136:CDS | 50.0% | |
| CAACTGGTACCTGCTTAAGC+TGG | + | chr4.2:9801313-9801332 | None:intergenic | 50.0% | |
| GAACAGTGTATCTGCTGGGA+AGG | - | chr4.2:9801700-9801719 | MS.gene58136:intron | 50.0% | |
| GTCCGGTATGGTTGTTACCA+AGG | - | chr4.2:9805029-9805048 | MS.gene58136:intron | 50.0% | |
| GTGCAGTTGGACAGAGTCTA+GGG | - | chr4.2:9801487-9801506 | MS.gene58136:intron | 50.0% | |
| TCTCCCAAAGAGCTGTCCAT+TGG | + | chr4.2:9804475-9804494 | None:intergenic | 50.0% | |
| ! | AATACAGGGGCTTTTAGCCG+AGG | - | chr4.2:9801887-9801906 | MS.gene58136:CDS | 50.0% |
| ! | GATTGCGGCTTTTCTTGTGC+CGG | + | chr4.2:9801210-9801229 | None:intergenic | 50.0% |
| ! | GCTTTTGTGTCTCAGCCTAG+AGG | - | chr4.2:9804729-9804748 | MS.gene58136:CDS | 50.0% |
| ! | TTTGAAGCAGCTGGTCACCA+TGG | - | chr4.2:9804442-9804461 | MS.gene58136:CDS | 50.0% |
| !! | GAAGCTGAGAAGCATCTGTC+CGG | - | chr4.2:9805012-9805031 | MS.gene58136:intron | 50.0% |
| !! | GTCGTTTTGTCCAAACGACG+CGG | - | chr4.2:9801287-9801306 | MS.gene58136:CDS | 50.0% |
| !! | TCTGCTTTGAAGCCAAAGCC+TGG | - | chr4.2:9801243-9801262 | MS.gene58136:CDS | 50.0% |
| !! | TGAGAAGCATCTGTCCGGTA+TGG | - | chr4.2:9805017-9805036 | MS.gene58136:intron | 50.0% |
| !!! | GGTGGAAACTTTTGGTGCCA+TGG | - | chr4.2:9802053-9802072 | MS.gene58136:CDS | 50.0% |
| CCAATCACAGTGCACAGTGC+AGG | + | chr4.2:9803196-9803215 | None:intergenic | 55.0% | |
| CCTGCACTGTGCACTGTGAT+TGG | - | chr4.2:9803193-9803212 | MS.gene58136:intron | 55.0% | |
| GGTGCAGTTGGACAGAGTCT+AGG | - | chr4.2:9801486-9801505 | MS.gene58136:intron | 55.0% | |
| TTTGGGCACGGACATGATCC+TGG | + | chr4.2:9802237-9802256 | None:intergenic | 55.0% | |
| ! | CTGGACTGCATCGGTGAATG+TGG | + | chr4.2:9804260-9804279 | None:intergenic | 55.0% |
| CATGCAGGCTGTGACAGCGA+TGG | - | chr4.2:9801607-9801626 | MS.gene58136:intron | 60.0% | |
| CTTAAGCTGGCCGCGTCGTT+TGG | + | chr4.2:9801300-9801319 | None:intergenic | 60.0% | |
| GGACATGATCCTGGCGGTCT+AGG | + | chr4.2:9802228-9802247 | None:intergenic | 60.0% | |
| TGTGACAGCGATGGTCCAGC+AGG | - | chr4.2:9801616-9801635 | MS.gene58136:CDS | 60.0% | |
| ACGACGCGGCCAGCTTAAGC+AGG | - | chr4.2:9801301-9801320 | MS.gene58136:CDS | 65.0% | |
| GGGCACGGACATGATCCTGG+CGG | + | chr4.2:9802234-9802253 | None:intergenic | 65.0% | |
| TCGACTCTGCCTAGACCGCC+AGG | - | chr4.2:9802216-9802235 | MS.gene58136:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 9801134 | 9805230 | 9801134 | ID=MS.gene58136 |
| chr4.2 | mRNA | 9801134 | 9805230 | 9801134 | ID=MS.gene58136.t1;Parent=MS.gene58136 |
| chr4.2 | exon | 9805042 | 9805230 | 9805042 | ID=MS.gene58136.t1.exon1;Parent=MS.gene58136.t1 |
| chr4.2 | CDS | 9805042 | 9805230 | 9805042 | ID=cds.MS.gene58136.t1;Parent=MS.gene58136.t1 |
| chr4.2 | exon | 9804643 | 9804750 | 9804643 | ID=MS.gene58136.t1.exon2;Parent=MS.gene58136.t1 |
| chr4.2 | CDS | 9804643 | 9804750 | 9804643 | ID=cds.MS.gene58136.t1;Parent=MS.gene58136.t1 |
| chr4.2 | exon | 9804429 | 9804533 | 9804429 | ID=MS.gene58136.t1.exon3;Parent=MS.gene58136.t1 |
| chr4.2 | CDS | 9804429 | 9804533 | 9804429 | ID=cds.MS.gene58136.t1;Parent=MS.gene58136.t1 |
| chr4.2 | exon | 9804254 | 9804310 | 9804254 | ID=MS.gene58136.t1.exon4;Parent=MS.gene58136.t1 |
| chr4.2 | CDS | 9804254 | 9804310 | 9804254 | ID=cds.MS.gene58136.t1;Parent=MS.gene58136.t1 |
| chr4.2 | exon | 9803954 | 9804150 | 9803954 | ID=MS.gene58136.t1.exon5;Parent=MS.gene58136.t1 |
| chr4.2 | CDS | 9803954 | 9804150 | 9803954 | ID=cds.MS.gene58136.t1;Parent=MS.gene58136.t1 |
| chr4.2 | exon | 9802258 | 9802357 | 9802258 | ID=MS.gene58136.t1.exon6;Parent=MS.gene58136.t1 |
| chr4.2 | CDS | 9802258 | 9802357 | 9802258 | ID=cds.MS.gene58136.t1;Parent=MS.gene58136.t1 |
| chr4.2 | exon | 9802031 | 9802143 | 9802031 | ID=MS.gene58136.t1.exon7;Parent=MS.gene58136.t1 |
| chr4.2 | CDS | 9802031 | 9802143 | 9802031 | ID=cds.MS.gene58136.t1;Parent=MS.gene58136.t1 |
| chr4.2 | exon | 9801778 | 9801928 | 9801778 | ID=MS.gene58136.t1.exon8;Parent=MS.gene58136.t1 |
| chr4.2 | CDS | 9801778 | 9801928 | 9801778 | ID=cds.MS.gene58136.t1;Parent=MS.gene58136.t1 |
| chr4.2 | exon | 9801614 | 9801691 | 9801614 | ID=MS.gene58136.t1.exon9;Parent=MS.gene58136.t1 |
| chr4.2 | CDS | 9801614 | 9801691 | 9801614 | ID=cds.MS.gene58136.t1;Parent=MS.gene58136.t1 |
| chr4.2 | exon | 9801134 | 9801352 | 9801134 | ID=MS.gene58136.t1.exon10;Parent=MS.gene58136.t1 |
| chr4.2 | CDS | 9801134 | 9801352 | 9801134 | ID=cds.MS.gene58136.t1;Parent=MS.gene58136.t1 |
| Gene Sequence |
| Protein sequence |
