Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70283.t1 | XP_003630160.2 | 97 | 440 | 13 | 0 | 93 | 532 | 2 | 441 | 3.00E-233 | 817.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70283.t1 | Q9FIB6 | 80.2 | 435 | 85 | 1 | 98 | 531 | 7 | 441 | 8.1e-195 | 681.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70283.t1 | B7FLC5 | 97.0 | 440 | 13 | 0 | 93 | 532 | 2 | 441 | 2.2e-233 | 817.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene70283 | 0.873844 | 1.07E-67 | -1.69E-46 |
| MS.gene049254 | MS.gene70283 | 0.846547 | 2.03E-59 | -1.69E-46 |
| MS.gene049283 | MS.gene70283 | 0.814793 | 1.29E-51 | -1.69E-46 |
| MS.gene049350 | MS.gene70283 | 0.833643 | 4.74E-56 | -1.69E-46 |
| MS.gene049368 | MS.gene70283 | 0.813164 | 2.94E-51 | -1.69E-46 |
| MS.gene049499 | MS.gene70283 | 0.847176 | 1.36E-59 | -1.69E-46 |
| MS.gene049711 | MS.gene70283 | 0.825644 | 4.19E-54 | -1.69E-46 |
| MS.gene049744 | MS.gene70283 | 0.809366 | 1.96E-50 | -1.69E-46 |
| MS.gene050559 | MS.gene70283 | 0.822878 | 1.87E-53 | -1.69E-46 |
| MS.gene050561 | MS.gene70283 | 0.827147 | 1.84E-54 | -1.69E-46 |
| MS.gene050562 | MS.gene70283 | 0.827053 | 1.93E-54 | -1.69E-46 |
| MS.gene051332 | MS.gene70283 | 0.84556 | 3.76E-59 | -1.69E-46 |
| MS.gene051744 | MS.gene70283 | 0.842164 | 3.06E-58 | -1.69E-46 |
| MS.gene051975 | MS.gene70283 | 0.832031 | 1.19E-55 | -1.69E-46 |
| MS.gene052307 | MS.gene70283 | 0.824065 | 9.88E-54 | -1.69E-46 |
| MS.gene052463 | MS.gene70283 | 0.81182 | 5.78E-51 | -1.69E-46 |
| MS.gene052518 | MS.gene70283 | 0.805615 | 1.23E-49 | -1.69E-46 |
| MS.gene052533 | MS.gene70283 | 0.823675 | 1.22E-53 | -1.69E-46 |
| MS.gene052534 | MS.gene70283 | 0.819824 | 9.48E-53 | -1.69E-46 |
| MS.gene052609 | MS.gene70283 | 0.827764 | 1.31E-54 | -1.69E-46 |
| MS.gene052717 | MS.gene70283 | 0.811012 | 8.66E-51 | -1.69E-46 |
| MS.gene052773 | MS.gene70283 | 0.802842 | 4.63E-49 | -1.69E-46 |
| MS.gene052775 | MS.gene70283 | 0.815579 | 8.60E-52 | -1.69E-46 |
| MS.gene053226 | MS.gene70283 | 0.834258 | 3.33E-56 | -1.69E-46 |
| MS.gene053272 | MS.gene70283 | -0.805787 | 1.13E-49 | -1.69E-46 |
| MS.gene054576 | MS.gene70283 | 0.819061 | 1.41E-52 | -1.69E-46 |
| MS.gene05458 | MS.gene70283 | 0.81655 | 5.22E-52 | -1.69E-46 |
| MS.gene054651 | MS.gene70283 | 0.816634 | 5.00E-52 | -1.69E-46 |
| MS.gene055313 | MS.gene70283 | 0.815433 | 9.27E-52 | -1.69E-46 |
| MS.gene055386 | MS.gene70283 | 0.832063 | 1.17E-55 | -1.69E-46 |
| MS.gene055513 | MS.gene70283 | 0.856152 | 3.90E-62 | -1.69E-46 |
| MS.gene056050 | MS.gene70283 | 0.844359 | 7.94E-59 | -1.69E-46 |
| MS.gene056509 | MS.gene70283 | 0.801158 | 1.03E-48 | -1.69E-46 |
| MS.gene056699 | MS.gene70283 | 0.844166 | 8.94E-59 | -1.69E-46 |
| MS.gene05686 | MS.gene70283 | 0.836883 | 7.21E-57 | -1.69E-46 |
| MS.gene057034 | MS.gene70283 | 0.84225 | 2.90E-58 | -1.69E-46 |
| MS.gene057102 | MS.gene70283 | 0.852064 | 5.90E-61 | -1.69E-46 |
| MS.gene057132 | MS.gene70283 | 0.815131 | 1.08E-51 | -1.69E-46 |
| MS.gene057208 | MS.gene70283 | 0.812477 | 4.16E-51 | -1.69E-46 |
| MS.gene058159 | MS.gene70283 | 0.800375 | 1.48E-48 | -1.69E-46 |
| MS.gene058668 | MS.gene70283 | 0.824539 | 7.64E-54 | -1.69E-46 |
| MS.gene058781 | MS.gene70283 | 0.80768 | 4.49E-50 | -1.69E-46 |
| MS.gene059439 | MS.gene70283 | 0.822052 | 2.91E-53 | -1.69E-46 |
| MS.gene059570 | MS.gene70283 | 0.824025 | 1.01E-53 | -1.69E-46 |
| MS.gene059625 | MS.gene70283 | 0.802085 | 6.63E-49 | -1.69E-46 |
| MS.gene05985 | MS.gene70283 | -0.86544 | 5.90E-65 | -1.69E-46 |
| MS.gene059965 | MS.gene70283 | 0.806108 | 9.65E-50 | -1.69E-46 |
| MS.gene060365 | MS.gene70283 | 0.805272 | 1.45E-49 | -1.69E-46 |
| MS.gene060435 | MS.gene70283 | 0.800341 | 1.51E-48 | -1.69E-46 |
| MS.gene060527 | MS.gene70283 | 0.806471 | 8.10E-50 | -1.69E-46 |
| MS.gene060777 | MS.gene70283 | 0.850115 | 2.09E-60 | -1.69E-46 |
| MS.gene060933 | MS.gene70283 | 0.836766 | 7.72E-57 | -1.69E-46 |
| MS.gene060935 | MS.gene70283 | 0.840847 | 6.79E-58 | -1.69E-46 |
| MS.gene060937 | MS.gene70283 | 0.858118 | 1.03E-62 | -1.69E-46 |
| MS.gene061100 | MS.gene70283 | 0.826301 | 2.92E-54 | -1.69E-46 |
| MS.gene061160 | MS.gene70283 | 0.828666 | 7.92E-55 | -1.69E-46 |
| MS.gene061188 | MS.gene70283 | 0.878339 | 3.04E-69 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70283.t1 | MTR_8g092450 | 97.045 | 440 | 13 | 0 | 93 | 532 | 2 | 441 | 0.0 | 869 |
| MS.gene70283.t1 | MTR_8g092390 | 96.347 | 438 | 16 | 0 | 95 | 532 | 1 | 438 | 0.0 | 863 |
| MS.gene70283.t1 | MTR_5g072475 | 48.352 | 91 | 47 | 0 | 192 | 282 | 35 | 125 | 5.32e-15 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70283.t1 | AT5G09900 | 79.773 | 440 | 88 | 1 | 93 | 531 | 2 | 441 | 0.0 | 706 |
| MS.gene70283.t1 | AT5G09900 | 80.230 | 435 | 85 | 1 | 98 | 531 | 7 | 441 | 0.0 | 704 |
| MS.gene70283.t1 | AT5G64760 | 76.818 | 440 | 101 | 1 | 93 | 531 | 2 | 441 | 0.0 | 677 |
| MS.gene70283.t1 | AT5G64760 | 77.471 | 435 | 97 | 1 | 98 | 531 | 7 | 441 | 0.0 | 676 |
| MS.gene70283.t1 | AT5G64760 | 78.147 | 421 | 91 | 1 | 112 | 531 | 1 | 421 | 0.0 | 661 |
| MS.gene70283.t1 | AT5G09900 | 78.402 | 338 | 72 | 1 | 98 | 434 | 7 | 344 | 0.0 | 530 |
Find 121 sgRNAs with CRISPR-Local
Find 291 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCCTGTATTTCCTTTATTT+TGG | 0.121650 | 4.1:+9092568 | None:intergenic |
| TTATCTTTCTTGAGAGTATT+TGG | 0.210165 | 4.1:+9092190 | None:intergenic |
| GACCATATTATCACCTTCTT+TGG | 0.222140 | 4.1:+9092122 | None:intergenic |
| TGAAATTTGCCGCTGCTATA+AGG | 0.251024 | 4.1:-9090408 | MS.gene70283:CDS |
| TCATTGTTTCTATACGTATT+TGG | 0.264087 | 4.1:-9093726 | MS.gene70283:CDS |
| CGTTGCTATCCTTTGCTGTT+TGG | 0.293818 | 4.1:+9089347 | None:intergenic |
| TATCTTTCTTGAGAGTATTT+GGG | 0.303298 | 4.1:+9092191 | None:intergenic |
| AGATCTCAATTTCCAGATTC+CGG | 0.308582 | 4.1:+9093654 | None:intergenic |
| CTTAAGCTGGCCGCGTCGTT+TGG | 0.310516 | 4.1:+9093139 | None:intergenic |
| ACGCGGCGGCGGCCGGAATC+TGG | 0.315767 | 4.1:-9093666 | MS.gene70283:CDS |
| AGGATAACATACTGGAAGTT+TGG | 0.319003 | 4.1:+9090119 | None:intergenic |
| TCATCCAATGGACAGCTCTT+TGG | 0.322854 | 4.1:-9089974 | MS.gene70283:CDS |
| CATCCAATGGACAGCTCTTT+GGG | 0.333432 | 4.1:-9089973 | MS.gene70283:CDS |
| GTCTGGAATACAATTCGGTT+TGG | 0.333594 | 4.1:+9093548 | None:intergenic |
| ACCATATTATCACCTTCTTT+GGG | 0.346638 | 4.1:+9092123 | None:intergenic |
| CAAGAAACTTGCCAAAATAA+AGG | 0.362901 | 4.1:-9092579 | MS.gene70283:CDS |
| GAGAGTACCGTGGTTTCGTT+TGG | 0.367636 | 4.1:+9093410 | None:intergenic |
| TGCCAAAATAAAGGAAATAC+AGG | 0.377728 | 4.1:-9092570 | MS.gene70283:CDS |
| GTGGTTAGAAACGGGTCTTT+AGG | 0.378511 | 4.1:+9093607 | None:intergenic |
| TCTGGAATACAATTCGGTTT+GGG | 0.386714 | 4.1:+9093549 | None:intergenic |
| AGACCAACCGCGGGTTGGTC+TGG | 0.388204 | 4.1:+9093531 | None:intergenic |
| ATTCGACATAGATGCATCTA+AGG | 0.393010 | 4.1:-9092157 | MS.gene70283:CDS |
| TAACTCGTGGGCAGCAAACT+TGG | 0.397845 | 4.1:-9089317 | MS.gene70283:CDS |
| AGATCAGACGGCGAAATTGC+CGG | 0.404288 | 4.1:-9093248 | MS.gene70283:CDS |
| TGCTGATATTCCATCTCTAC+TGG | 0.412149 | 4.1:-9092088 | MS.gene70283:CDS |
| GTCAGGCAGGTGGTTAGAAA+CGG | 0.422846 | 4.1:+9093598 | None:intergenic |
| GTTTGTCGAGTCCGCGGGTC+AGG | 0.423705 | 4.1:+9093581 | None:intergenic |
| GCCCAAAGAAGGTGATAATA+TGG | 0.427248 | 4.1:-9092124 | MS.gene70283:CDS |
| TCAATACGAGTTTCAACATC+TGG | 0.427862 | 4.1:+9092780 | None:intergenic |
| TTCAAGATAATCATTGTTGT+GGG | 0.433017 | 4.1:+9090427 | None:intergenic |
| CAATATATTGCATAGCCTGC+TGG | 0.433604 | 4.1:+9092811 | None:intergenic |
| GCATCTATGTCGAATACTCT+TGG | 0.433663 | 4.1:+9092165 | None:intergenic |
| TTTGACAATGAGATGGTCTA+TGG | 0.435499 | 4.1:-9089933 | MS.gene70283:CDS |
| GGTTCATAAAGCAGCTTTGA+AGG | 0.436788 | 4.1:-9089239 | MS.gene70283:CDS |
| GGACATGATCCTGGCGGTCT+AGG | 0.445916 | 4.1:+9092217 | None:intergenic |
| GTCGAGTCCGCGGGTCAGGC+AGG | 0.450574 | 4.1:+9093585 | None:intergenic |
| ACTATTACGAGCTAATGATT+AGG | 0.458857 | 4.1:-9092053 | MS.gene70283:intron |
| GGTTGGTCTGGAATACAATT+CGG | 0.460430 | 4.1:+9093543 | None:intergenic |
| TTTCTATACGTATTTGGTGG+AGG | 0.460588 | 4.1:-9093720 | MS.gene70283:CDS |
| TCTGCTTTGAAGCCAAAGCC+TGG | 0.465047 | 4.1:-9093193 | MS.gene70283:CDS |
| TTTCAAGATAATCATTGTTG+TGG | 0.472189 | 4.1:+9090426 | None:intergenic |
| GCTAACCACGCGGCGGCGGC+CGG | 0.473862 | 4.1:-9093673 | MS.gene70283:CDS |
| TCAGGCAGGTGGTTAGAAAC+GGG | 0.479166 | 4.1:+9093599 | None:intergenic |
| AGAGTACCGTGGTTTCGTTT+GGG | 0.481109 | 4.1:+9093411 | None:intergenic |
| TTGTTTCTATACGTATTTGG+TGG | 0.483108 | 4.1:-9093723 | MS.gene70283:CDS |
| TATGGTTGTTACCAAGGCTC+TGG | 0.483429 | 4.1:-9089407 | MS.gene70283:CDS |
| TTCTATACGTATTTGGTGGA+GGG | 0.489531 | 4.1:-9093719 | MS.gene70283:CDS |
| GGAGAAGATGCTTGATCTTG+TGG | 0.492893 | 4.1:-9089296 | MS.gene70283:CDS |
| TAACGCTAACCACGCGGCGG+CGG | 0.494885 | 4.1:-9093677 | MS.gene70283:CDS |
| CATCTATGTCGAATACTCTT+GGG | 0.496534 | 4.1:+9092166 | None:intergenic |
| CAAGGTGGAATTTAAAAGAC+TGG | 0.502902 | 4.1:+9090166 | None:intergenic |
| TTTGGGCACGGACATGATCC+TGG | 0.504121 | 4.1:+9092208 | None:intergenic |
| AATCTTTGCAACCAGAGCCT+TGG | 0.507062 | 4.1:+9089396 | None:intergenic |
| GCAAAGATTGACAGACCAAT+GGG | 0.508334 | 4.1:-9089382 | MS.gene70283:CDS |
| TCGACTCTGCCTAGACCGCC+AGG | 0.509366 | 4.1:-9092226 | MS.gene70283:CDS |
| AATTCGGTTTGGGCGGATGT+CGG | 0.511836 | 4.1:+9093559 | None:intergenic |
| GTTTGGACAAAACGACAATC+TGG | 0.512141 | 4.1:+9093156 | None:intergenic |
| TCTTATCAGGTGGAAACTCT+TGG | 0.513807 | 4.1:-9092397 | MS.gene70283:intron |
| TGCTTCAACTCCAGTAGAGA+TGG | 0.518855 | 4.1:+9092078 | None:intergenic |
| TGTCGGTTTGTCGAGTCCGC+GGG | 0.522339 | 4.1:+9093576 | None:intergenic |
| TCTCCCAAAGAGCTGTCCAT+TGG | 0.527502 | 4.1:+9089970 | None:intergenic |
| TGTGACAGCGATGGTCCAGC+AGG | 0.529317 | 4.1:-9092826 | MS.gene70283:CDS |
| ACATTGAACAGTGTATCTGC+TGG | 0.532773 | 4.1:-9092747 | MS.gene70283:CDS |
| TGAGATTGAGAGAGCAAGGT+TGG | 0.535070 | 4.1:-9092603 | MS.gene70283:CDS |
| TTGCATCAAATCAGCAGCCT+CGG | 0.540212 | 4.1:+9092538 | None:intergenic |
| CAAGTGGTACCTGCTTAAGC+TGG | 0.542473 | 4.1:+9093126 | None:intergenic |
| CAAAGCTGCTTTATGAACCA+TGG | 0.543033 | 4.1:+9089243 | None:intergenic |
| AGTAGAGATGGAATATCAGC+AGG | 0.547557 | 4.1:+9092090 | None:intergenic |
| ACGACGCGGCCAGCTTAAGC+AGG | 0.547759 | 4.1:-9093135 | MS.gene70283:intron |
| GAAGCTGAGAAGCATCTGTC+CGG | 0.552717 | 4.1:-9089430 | MS.gene70283:CDS |
| GGTGGAAACTCTTGGTGCCA+TGG | 0.554318 | 4.1:-9092389 | MS.gene70283:CDS |
| CCTACAGGAATAAAATCAGC+AGG | 0.555937 | 4.1:+9090353 | None:intergenic |
| TGGAAACAGACTATTCCCAT+TGG | 0.557174 | 4.1:+9089367 | None:intergenic |
| TGCAAAGATTGACAGACCAA+TGG | 0.572504 | 4.1:-9089383 | MS.gene70283:CDS |
| TGAGAAGCATCTGTCCGGTA+TGG | 0.572589 | 4.1:-9089425 | MS.gene70283:CDS |
| ATGTCGGTTTGTCGAGTCCG+CGG | 0.574484 | 4.1:+9093575 | None:intergenic |
| GAGGAAAATATGTTGGTGCT+TGG | 0.574826 | 4.1:-9090216 | MS.gene70283:CDS |
| TATACGTATTTGGTGGAGGG+CGG | 0.575125 | 4.1:-9093716 | MS.gene70283:CDS |
| GAGTCCGCGGGTCAGGCAGG+TGG | 0.576662 | 4.1:+9093588 | None:intergenic |
| GTCCGGTATGGTTGTTACCA+AGG | 0.577395 | 4.1:-9089413 | MS.gene70283:CDS |
| GCAACGATGTTCTTAACTCG+TGG | 0.578239 | 4.1:-9089330 | MS.gene70283:CDS |
| AGCCCAATCCAGACCAACCG+CGG | 0.579285 | 4.1:+9093521 | None:intergenic |
| TTCTTGAGAGTATTTGGGCA+CGG | 0.586277 | 4.1:+9092196 | None:intergenic |
| ACGTTGAGATTGAGAGAGCA+AGG | 0.591447 | 4.1:-9092607 | MS.gene70283:CDS |
| TTTAAAAGACTGGACTGCAT+CGG | 0.598019 | 4.1:+9090176 | None:intergenic |
| CATTGAACAGTGTATCTGCT+GGG | 0.598121 | 4.1:-9092746 | MS.gene70283:CDS |
| ATTCCAGACCAACCCGCGGT+TGG | 0.600890 | 4.1:-9093534 | MS.gene70283:intron |
| AGATCCTGAGGAAAATATGT+TGG | 0.600984 | 4.1:-9090223 | MS.gene70283:CDS |
| GCCCAATCCAGACCAACCGC+GGG | 0.602661 | 4.1:+9093522 | None:intergenic |
| AGATAGATTTCTATCCTCCA+AGG | 0.603704 | 4.1:+9090148 | None:intergenic |
| TTTGAAGCAGCTGGTCACCA+TGG | 0.604172 | 4.1:-9090000 | MS.gene70283:CDS |
| AATCCAGACCAACCGCGGGT+TGG | 0.604588 | 4.1:+9093526 | None:intergenic |
| AGCCTTGGTAACAACCATAC+CGG | 0.606298 | 4.1:+9089411 | None:intergenic |
| CAACGATGTTCTTAACTCGT+GGG | 0.607448 | 4.1:-9089329 | MS.gene70283:CDS |
| GGAATACAATTCGGTTTGGG+CGG | 0.611985 | 4.1:+9093552 | None:intergenic |
| CATATATTGCCTTATAGCAG+CGG | 0.613022 | 4.1:+9090399 | None:intergenic |
| GAGGGCGGCTGTGTTTGCAG+TGG | 0.615002 | 4.1:-9093701 | MS.gene70283:CDS |
| AGGTGATAATATGGTCGAAG+AGG | 0.618539 | 4.1:-9092115 | MS.gene70283:CDS |
| GCCAAAATAAAGGAAATACA+GGG | 0.621973 | 4.1:-9092569 | MS.gene70283:CDS |
| GAATGAGTTTGACAATGAGA+TGG | 0.628221 | 4.1:-9089940 | MS.gene70283:CDS |
| TCACCATGGAAGTCATCCAA+TGG | 0.630891 | 4.1:-9089986 | MS.gene70283:CDS |
| GAACAGTGTATCTGCTGGGA+AGG | 0.631990 | 4.1:-9092742 | MS.gene70283:intron |
| AGTCTGTTTCCAAACAGCAA+AGG | 0.634017 | 4.1:-9089356 | MS.gene70283:CDS |
| CTGGACTGCATCGGTGAATG+TGG | 0.634478 | 4.1:+9090185 | None:intergenic |
| GAGTTGCAAGATATCGATTG+CGG | 0.635622 | 4.1:+9093214 | None:intergenic |
| AGATTCCGGCCGCCGCCGCG+TGG | 0.635667 | 4.1:+9093668 | None:intergenic |
| GTTCTTACATACAGATCCTG+AGG | 0.637665 | 4.1:-9090235 | MS.gene70283:intron |
| TCAAATACACAAGGAAACCA+TGG | 0.640379 | 4.1:-9089260 | MS.gene70283:CDS |
| CTAACCACCTGCCTGACCCG+CGG | 0.641316 | 4.1:-9093592 | MS.gene70283:CDS |
| GAGAAGCAGATGAGATCAGA+CGG | 0.646168 | 4.1:-9093260 | MS.gene70283:CDS |
| TGATTTGATGCAAGAAATTG+CGG | 0.655673 | 4.1:-9092528 | MS.gene70283:intron |
| CATGCAGGCTGTGACAGCGA+TGG | 0.669127 | 4.1:-9092835 | MS.gene70283:intron |
| GAGCTGTCATCAAATACACA+AGG | 0.670564 | 4.1:-9089269 | MS.gene70283:CDS |
| GTTTATCCCAAACGAAACCA+CGG | 0.671463 | 4.1:-9093417 | MS.gene70283:intron |
| CCAAAATAAAGGAAATACAG+GGG | 0.675681 | 4.1:-9092568 | MS.gene70283:CDS |
| TAGATTTCTATCCTCCAAGG+TGG | 0.684299 | 4.1:+9090151 | None:intergenic |
| TGTCCATTGGATGACTTCCA+TGG | 0.689019 | 4.1:+9089983 | None:intergenic |
| TTGTATTCCAGACCAACCCG+CGG | 0.711239 | 4.1:-9093538 | MS.gene70283:CDS |
| GGGCACGGACATGATCCTGG+CGG | 0.747981 | 4.1:+9092211 | None:intergenic |
| AGTGGTTAACGCTAACCACG+CGG | 0.752970 | 4.1:-9093683 | MS.gene70283:CDS |
| GGTTAACGCTAACCACGCGG+CGG | 0.773116 | 4.1:-9093680 | MS.gene70283:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAACAAATAAAATAAGA+TGG | + | chr4.1:9093493-9093512 | None:intergenic | 10.0% |
| !! | GTTTGTATAAAATAAACTAA+AGG | + | chr4.1:9091048-9091067 | None:intergenic | 15.0% |
| !! | TACTATAAGATTATGTTATA+CGG | - | chr4.1:9092686-9092705 | MS.gene70283:intron | 15.0% |
| !!! | ACTTTAATAACTTTTTCTTA+TGG | - | chr4.1:9093329-9093348 | MS.gene70283:intron | 15.0% |
| !!! | ATATATCTTTTTTTCGTTTT+TGG | - | chr4.1:9090511-9090530 | MS.gene70283:intron | 15.0% |
| !!! | ATATTTTAACATGATTAGAA+AGG | + | chr4.1:9092905-9092924 | None:intergenic | 15.0% |
| !!! | TAATTAACTGTTTTAATTCT+TGG | - | chr4.1:9091495-9091514 | MS.gene70283:intron | 15.0% |
| !!! | TTTGGTTTTTATATTCAAAT+AGG | + | chr4.1:9091155-9091174 | None:intergenic | 15.0% |
| !!! | TTTTAAAATAGATTATGCTA+TGG | + | chr4.1:9090310-9090329 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTCGTTTAGAT+TGG | - | chr4.1:9089938-9089957 | MS.gene70283:CDS | 15.0% |
| !! | AAACTAAAATATAGAAAACC+AGG | + | chr4.1:9091099-9091118 | None:intergenic | 20.0% |
| !! | AATTGTTTGCTTAAAATGAT+TGG | - | chr4.1:9089962-9089981 | MS.gene70283:CDS | 20.0% |
| !! | ACAGTTAATTAAAAACTTGT+TGG | + | chr4.1:9091486-9091505 | None:intergenic | 20.0% |
| !! | CAATTTGATATTTAGTAACA+AGG | + | chr4.1:9091567-9091586 | None:intergenic | 20.0% |
| !! | CTCGTTTATAAAATTCTAAA+TGG | + | chr4.1:9091979-9091998 | None:intergenic | 20.0% |
| !! | GATTAGTACAAATTATTGTT+TGG | - | chr4.1:9090542-9090561 | MS.gene70283:intron | 20.0% |
| !! | TGAAAAGCAGTTATATTATA+GGG | + | chr4.1:9089641-9089660 | None:intergenic | 20.0% |
| !! | TTAAAGAAAAACTATATCCT+TGG | - | chr4.1:9093368-9093387 | MS.gene70283:intron | 20.0% |
| !! | TTGAAAAGCAGTTATATTAT+AGG | + | chr4.1:9089642-9089661 | None:intergenic | 20.0% |
| !! | TTTCAAAATAGTTAAGAACT+GGG | + | chr4.1:9091887-9091906 | None:intergenic | 20.0% |
| !!! | AAAAAAAAGTGTAAGGAATT+CGG | + | chr4.1:9093138-9093157 | None:intergenic | 20.0% |
| !!! | AATAACTTTTTCTTATGGTT+TGG | - | chr4.1:9093334-9093353 | MS.gene70283:intron | 20.0% |
| !!! | AGATTCTAAAATAACAGTAT+AGG | + | chr4.1:9091195-9091214 | None:intergenic | 20.0% |
| !!! | ATAACTTTTTCTTATGGTTT+GGG | - | chr4.1:9093335-9093354 | MS.gene70283:intron | 20.0% |
| !!! | ATTTTAGAATCTGAAAGATA+AGG | - | chr4.1:9091203-9091222 | MS.gene70283:intron | 20.0% |
| !!! | ATTTTTTAGAACAGTATCAA+TGG | + | chr4.1:9092126-9092145 | None:intergenic | 20.0% |
| !!! | CATTTAGAATTTTATAAACG+AGG | - | chr4.1:9091977-9091996 | MS.gene70283:intron | 20.0% |
| !!! | CTAAAATCTTTTAAACCTAA+CGG | + | chr4.1:9089912-9089931 | None:intergenic | 20.0% |
| !!! | GAAACATAAAAAAAAGTGTA+AGG | + | chr4.1:9093145-9093164 | None:intergenic | 20.0% |
| !!! | TAAAATGATTGGTTTGTTTA+GGG | - | chr4.1:9089973-9089992 | MS.gene70283:CDS | 20.0% |
| !!! | TATTTATGGATTATTAGAGT+GGG | - | chr4.1:9091653-9091672 | MS.gene70283:intron | 20.0% |
| !!! | TTAAAATGATTGGTTTGTTT+AGG | - | chr4.1:9089972-9089991 | MS.gene70283:CDS | 20.0% |
| !!! | TTTAGTTTCATTAACTTTTG+AGG | - | chr4.1:9091111-9091130 | MS.gene70283:intron | 20.0% |
| ! | AAGAAATACTACAACTAAAC+AGG | + | chr4.1:9090972-9090991 | None:intergenic | 25.0% |
| ! | AAGGATGAAAGATGAAAAAT+AGG | + | chr4.1:9092886-9092905 | None:intergenic | 25.0% |
| ! | AATGAAAAGTAGAGATGAAA+TGG | + | chr4.1:9091850-9091869 | None:intergenic | 25.0% |
| ! | AGAAGTAAGTGATTAAAATG+TGG | + | chr4.1:9091800-9091819 | None:intergenic | 25.0% |
| ! | AGTAATGTAGAGTAAAGAAT+TGG | - | chr4.1:9092309-9092328 | MS.gene70283:intron | 25.0% |
| ! | CATAAGGAAAAAAAAAGTCA+GGG | + | chr4.1:9092503-9092522 | None:intergenic | 25.0% |
| ! | CTGTATGTAAGAACAATATT+CGG | + | chr4.1:9092741-9092760 | None:intergenic | 25.0% |
| ! | GTTTCAAAATAGTTAAGAAC+TGG | + | chr4.1:9091888-9091907 | None:intergenic | 25.0% |
| ! | TACAACAAGAATATTCTGAA+AGG | + | chr4.1:9093208-9093227 | None:intergenic | 25.0% |
| ! | TCTTCTATGTTAAATTGTGT+AGG | - | chr4.1:9090732-9090751 | MS.gene70283:intron | 25.0% |
| ! | TGAAAAATAGGATAACATAC+TGG | + | chr4.1:9092874-9092893 | None:intergenic | 25.0% |
| ! | TTATGCACGAGTAATTAATT+AGG | + | chr4.1:9093527-9093546 | None:intergenic | 25.0% |
| ! | TTCAAGATAATCATTGTTGT+GGG | + | chr4.1:9092558-9092577 | None:intergenic | 25.0% |
| ! | TTTCAAGATAATCATTGTTG+TGG | + | chr4.1:9092559-9092578 | None:intergenic | 25.0% |
| ! | TTTGTATGATTGGTACAAAA+AGG | - | chr4.1:9090099-9090118 | MS.gene70283:intron | 25.0% |
| !! | AACTTTGGAAATTTAGGAAT+CGG | + | chr4.1:9091825-9091844 | None:intergenic | 25.0% |
| !! | AAGTTCAAACTCGTTTTATA+TGG | + | chr4.1:9092045-9092064 | None:intergenic | 25.0% |
| !! | ATGGATAACTTTGGAAATTT+AGG | + | chr4.1:9091831-9091850 | None:intergenic | 25.0% |
| !! | CGTTAGGTTTAAAAGATTTT+AGG | - | chr4.1:9089910-9089929 | MS.gene70283:CDS | 25.0% |
| !! | CTCCTTTTTATCTATATCTA+CGG | - | chr4.1:9091375-9091394 | MS.gene70283:intron | 25.0% |
| !! | GTATTTATGGATTATTAGAG+TGG | - | chr4.1:9091652-9091671 | MS.gene70283:intron | 25.0% |
| !! | TCCTTTTTATCTATATCTAC+GGG | - | chr4.1:9091376-9091395 | MS.gene70283:intron | 25.0% |
| !! | TTTTCTATATTACGTAAGTG+CGG | - | chr4.1:9091428-9091447 | MS.gene70283:intron | 25.0% |
| !!! | GCTTTAAACTCTAAAATGAT+TGG | - | chr4.1:9090005-9090024 | MS.gene70283:CDS | 25.0% |
| !!! | TATCTTTCTTGAGAGTATTT+GGG | + | chr4.1:9090794-9090813 | None:intergenic | 25.0% |
| !!! | TCATTGTTTCTATACGTATT+TGG | - | chr4.1:9089256-9089275 | MS.gene70283:CDS | 25.0% |
| !!! | TGTTTTAATTCTTGGTTTGA+TGG | - | chr4.1:9091503-9091522 | MS.gene70283:intron | 25.0% |
| !!! | TTATCTTTCTTGAGAGTATT+TGG | + | chr4.1:9090795-9090814 | None:intergenic | 25.0% |
| AAATAAGATGGAAGACCAAT+AGG | + | chr4.1:9093481-9093500 | None:intergenic | 30.0% | |
| ACCATATTATCACCTTCTTT+GGG | + | chr4.1:9090862-9090881 | None:intergenic | 30.0% | |
| ACTATTACGAGCTAATGATT+AGG | - | chr4.1:9090929-9090948 | MS.gene70283:intron | 30.0% | |
| AGAGATGAAATGGATAACTT+TGG | + | chr4.1:9091840-9091859 | None:intergenic | 30.0% | |
| AGCAGCATAAATATAAACGA+CGG | + | chr4.1:9092229-9092248 | None:intergenic | 30.0% | |
| AGTAAGAAATATCATGAACC+AGG | + | chr4.1:9092475-9092494 | None:intergenic | 30.0% | |
| AGTATCAATGGTAAAAGACA+AGG | + | chr4.1:9092114-9092133 | None:intergenic | 30.0% | |
| AGTCCTGTTTATTTGTGTTT+GGG | - | chr4.1:9092258-9092277 | MS.gene70283:intron | 30.0% | |
| CAAGAAACTTGCCAAAATAA+AGG | - | chr4.1:9090403-9090422 | MS.gene70283:CDS | 30.0% | |
| CCAAAATAAAGGAAATACAG+GGG | - | chr4.1:9090414-9090433 | MS.gene70283:CDS | 30.0% | |
| CGTAGATATAGATAAAAAGG+AGG | + | chr4.1:9091377-9091396 | None:intergenic | 30.0% | |
| GAGAAGATGATAAAACAGTA+TGG | + | chr4.1:9090288-9090307 | None:intergenic | 30.0% | |
| GCATAAGGAAAAAAAAAGTC+AGG | + | chr4.1:9092504-9092523 | None:intergenic | 30.0% | |
| GCCAAAATAAAGGAAATACA+GGG | - | chr4.1:9090413-9090432 | MS.gene70283:CDS | 30.0% | |
| GCTATTATATATATGCATGC+AGG | - | chr4.1:9090132-9090151 | MS.gene70283:CDS | 30.0% | |
| GTAGATACTCTAAATTATCC+TGG | - | chr4.1:9091078-9091097 | MS.gene70283:intron | 30.0% | |
| TAACAGAACAAAACCATAAC+TGG | + | chr4.1:9093304-9093323 | None:intergenic | 30.0% | |
| TAATTACTCGTGCATAATTC+AGG | - | chr4.1:9093530-9093549 | MS.gene70283:intron | 30.0% | |
| TCCCGTAGATATAGATAAAA+AGG | + | chr4.1:9091380-9091399 | None:intergenic | 30.0% | |
| TGATTTGATGCAAGAAATTG+CGG | - | chr4.1:9090454-9090473 | MS.gene70283:intron | 30.0% | |
| TGCACAAGTTAAGAAAAACT+CGG | + | chr4.1:9089494-9089513 | None:intergenic | 30.0% | |
| TGCCAAAATAAAGGAAATAC+AGG | - | chr4.1:9090412-9090431 | MS.gene70283:CDS | 30.0% | |
| ! | AATTTTCTCAGTTTTTGCCA+TGG | + | chr4.1:9090613-9090632 | None:intergenic | 30.0% |
| ! | GCTAACTTGTACTGTATTTA+TGG | - | chr4.1:9091639-9091658 | MS.gene70283:intron | 30.0% |
| ! | GTTTAGAATTCCTTGTCATT+GGG | - | chr4.1:9092928-9092947 | MS.gene70283:intron | 30.0% |
| ! | GTTTGGTTTACTTATGTGAT+GGG | - | chr4.1:9090559-9090578 | MS.gene70283:intron | 30.0% |
| ! | TGTTTAGAATTCCTTGTCAT+TGG | - | chr4.1:9092927-9092946 | MS.gene70283:intron | 30.0% |
| ! | TGTTTGGTTTACTTATGTGA+TGG | - | chr4.1:9090558-9090577 | MS.gene70283:intron | 30.0% |
| !! | CTACATATTTTTCTAGTACC+TGG | - | chr4.1:9092454-9092473 | MS.gene70283:intron | 30.0% |
| !! | CTATGATTTGTTTCTATGCT+TGG | - | chr4.1:9091400-9091419 | MS.gene70283:intron | 30.0% |
| !! | CTTTTTCGTGTTAGGAATTA+GGG | - | chr4.1:9089883-9089902 | MS.gene70283:CDS | 30.0% |
| !! | GAACTTTAGAATAAACTTGC+TGG | - | chr4.1:9092059-9092078 | MS.gene70283:CDS | 30.0% |
| !! | TAGAATAAACTTGCTGGATT+TGG | - | chr4.1:9092065-9092084 | MS.gene70283:CDS | 30.0% |
| !! | TTGTTTCTATACGTATTTGG+TGG | - | chr4.1:9089259-9089278 | MS.gene70283:CDS | 30.0% |
| !!! | CTGCATCTTTTTTGTATGAT+TGG | - | chr4.1:9090089-9090108 | MS.gene70283:intron | 30.0% |
| !!! | GACTTTTTTTTTCCTTATGC+TGG | - | chr4.1:9092504-9092523 | MS.gene70283:intron | 30.0% |
| AAAGAGAATAGAAAGCCTAC+AGG | + | chr4.1:9092647-9092666 | None:intergenic | 35.0% | |
| AACCCAAGTTTAGAAAGCTA+TGG | + | chr4.1:9092366-9092385 | None:intergenic | 35.0% | |
| AAGGAATCCAAATGTTAGGA+AGG | + | chr4.1:9092095-9092114 | None:intergenic | 35.0% | |
| AATTTGAGTAAACGCAAGCA+AGG | + | chr4.1:9091307-9091326 | None:intergenic | 35.0% | |
| ACCCAAGTTTAGAAAGCTAT+GGG | + | chr4.1:9092365-9092384 | None:intergenic | 35.0% | |
| ACTATATCCTTGGAAAGTGA+AGG | - | chr4.1:9093378-9093397 | MS.gene70283:intron | 35.0% | |
| AGACAAGGAATCCAAATGTT+AGG | + | chr4.1:9092099-9092118 | None:intergenic | 35.0% | |
| AGATAGATTTCTATCCTCCA+AGG | + | chr4.1:9092837-9092856 | None:intergenic | 35.0% | |
| AGATCCTGAGGAAAATATGT+TGG | - | chr4.1:9092759-9092778 | MS.gene70283:CDS | 35.0% | |
| AGATCTCAATTTCCAGATTC+CGG | + | chr4.1:9089331-9089350 | None:intergenic | 35.0% | |
| AGGATAACATACTGGAAGTT+TGG | + | chr4.1:9092866-9092885 | None:intergenic | 35.0% | |
| AGTTAGCTACCTAAGAAACT+TGG | + | chr4.1:9091626-9091645 | None:intergenic | 35.0% | |
| ATTCGACATAGATGCATCTA+AGG | - | chr4.1:9090825-9090844 | MS.gene70283:intron | 35.0% | |
| CAAGGTGGAATTTAAAAGAC+TGG | + | chr4.1:9092819-9092838 | None:intergenic | 35.0% | |
| CATATATTGCCTTATAGCAG+CGG | + | chr4.1:9092586-9092605 | None:intergenic | 35.0% | |
| CATCCCAAACACAAATAAAC+AGG | + | chr4.1:9092264-9092283 | None:intergenic | 35.0% | |
| CATCTATGTCGAATACTCTT+GGG | + | chr4.1:9090819-9090838 | None:intergenic | 35.0% | |
| CCTAACAATCCAAGTTTCTT+AGG | - | chr4.1:9091614-9091633 | MS.gene70283:intron | 35.0% | |
| CCTAAGAAACTTGGATTGTT+AGG | + | chr4.1:9091617-9091636 | None:intergenic | 35.0% | |
| CCTAATTCCTAACACGAAAA+AGG | + | chr4.1:9089885-9089904 | None:intergenic | 35.0% | |
| GAAAAGAAAAAGCCCAAAGA+AGG | - | chr4.1:9090847-9090866 | MS.gene70283:intron | 35.0% | |
| GAATGAGTTTGACAATGAGA+TGG | - | chr4.1:9093042-9093061 | MS.gene70283:intron | 35.0% | |
| GACATTCATGCATCATTGTT+TGG | + | chr4.1:9091173-9091192 | None:intergenic | 35.0% | |
| GACCATATTATCACCTTCTT+TGG | + | chr4.1:9090863-9090882 | None:intergenic | 35.0% | |
| GAGTCCTGTTTATTTGTGTT+TGG | - | chr4.1:9092257-9092276 | MS.gene70283:intron | 35.0% | |
| GTAAACCTGTAACTACCTAT+TGG | - | chr4.1:9093463-9093482 | MS.gene70283:intron | 35.0% | |
| TAAAATTGCAGTCAGACAGA+CGG | + | chr4.1:9091243-9091262 | None:intergenic | 35.0% | |
| TAGAGAGAAGTGACTTGAAA+AGG | + | chr4.1:9089540-9089559 | None:intergenic | 35.0% | |
| TATATTACGTAAGTGCGGAT+TGG | - | chr4.1:9091433-9091452 | MS.gene70283:intron | 35.0% | |
| TCAAATACACAAGGAAACCA+TGG | - | chr4.1:9093722-9093741 | MS.gene70283:CDS | 35.0% | |
| TCAATACGAGTTTCAACATC+TGG | + | chr4.1:9090205-9090224 | None:intergenic | 35.0% | |
| TGGTTATCCTTCCTAACATT+TGG | - | chr4.1:9092085-9092104 | MS.gene70283:CDS | 35.0% | |
| TTTAAAAGACTGGACTGCAT+CGG | + | chr4.1:9092809-9092828 | None:intergenic | 35.0% | |
| TTTGACAATGAGATGGTCTA+TGG | - | chr4.1:9093049-9093068 | MS.gene70283:intron | 35.0% | |
| ! | ACTAGTAGTTACAAGTACTG+TGG | - | chr4.1:9091001-9091020 | MS.gene70283:intron | 35.0% |
| ! | ATCAGCAGGATTTTCTTTGA+TGG | + | chr4.1:9092618-9092637 | None:intergenic | 35.0% |
| ! | CAACAACTATTTTCACATGC+AGG | + | chr4.1:9093444-9093463 | None:intergenic | 35.0% |
| ! | CAGTCTTTTAAATTCCACCT+TGG | - | chr4.1:9092817-9092836 | MS.gene70283:CDS | 35.0% |
| ! | GGTTTTCTGTCTGTGATTTT+AGG | - | chr4.1:9092525-9092544 | MS.gene70283:intron | 35.0% |
| ! | TCTAAAATGATTGGTGCAGT+TGG | - | chr4.1:9090014-9090033 | MS.gene70283:intron | 35.0% |
| ! | TCTGGAATACAATTCGGTTT+GGG | + | chr4.1:9089436-9089455 | None:intergenic | 35.0% |
| ! | TCTTTTAAATTCCACCTTGG+AGG | - | chr4.1:9092820-9092839 | MS.gene70283:CDS | 35.0% |
| ! | TGCTTTTCAATTCGTTTTGC+AGG | - | chr4.1:9089652-9089671 | MS.gene70283:intron | 35.0% |
| ! | TGTGGCTTGACTTTGTATTT+TGG | - | chr4.1:9091019-9091038 | MS.gene70283:intron | 35.0% |
| ! | TTATGGATTATTAGAGTGGG+AGG | - | chr4.1:9091656-9091675 | MS.gene70283:intron | 35.0% |
| ! | TTCTATACGTATTTGGTGGA+GGG | - | chr4.1:9089263-9089282 | MS.gene70283:CDS | 35.0% |
| ! | TTTCTATACGTATTTGGTGG+AGG | - | chr4.1:9089262-9089281 | MS.gene70283:CDS | 35.0% |
| !! | AAACGACGGTTGATAAGAAT+TGG | + | chr4.1:9092215-9092234 | None:intergenic | 35.0% |
| !! | ATGTGATGGGTAATCTTATC+AGG | - | chr4.1:9090572-9090591 | MS.gene70283:intron | 35.0% |
| !! | CCCCTGTATTTCCTTTATTT+TGG | + | chr4.1:9090417-9090436 | None:intergenic | 35.0% |
| !! | CCTTTTTCGTGTTAGGAATT+AGG | - | chr4.1:9089882-9089901 | MS.gene70283:CDS | 35.0% |
| !! | GGTACAAAAAGGTATTAACG+AGG | - | chr4.1:9090110-9090129 | MS.gene70283:intron | 35.0% |
| ACAGACAGAAAACCAGCATA+AGG | + | chr4.1:9092519-9092538 | None:intergenic | 40.0% | |
| ACATTGAACAGTGTATCTGC+TGG | - | chr4.1:9090235-9090254 | MS.gene70283:intron | 40.0% | |
| AGGTGATAATATGGTCGAAG+AGG | - | chr4.1:9090867-9090886 | MS.gene70283:intron | 40.0% | |
| AGTAGAGATGGAATATCAGC+AGG | + | chr4.1:9090895-9090914 | None:intergenic | 40.0% | |
| AGTCTGTTTCCAAACAGCAA+AGG | - | chr4.1:9093626-9093645 | MS.gene70283:CDS | 40.0% | |
| CAACGATGTTCTTAACTCGT+GGG | - | chr4.1:9093653-9093672 | MS.gene70283:CDS | 40.0% | |
| CAATATATTGCATAGCCTGC+TGG | + | chr4.1:9090174-9090193 | None:intergenic | 40.0% | |
| CATTGAACAGTGTATCTGCT+GGG | - | chr4.1:9090236-9090255 | MS.gene70283:intron | 40.0% | |
| CCCAAGTTTAGAAAGCTATG+GGG | + | chr4.1:9092364-9092383 | None:intergenic | 40.0% | |
| CCCCATAGCTTTCTAAACTT+GGG | - | chr4.1:9092361-9092380 | MS.gene70283:CDS | 40.0% | |
| CCTACAGGAATAAAATCAGC+AGG | + | chr4.1:9092632-9092651 | None:intergenic | 40.0% | |
| CTTGGAAAGTGAAGGTAGTA+GGG | - | chr4.1:9093386-9093405 | MS.gene70283:intron | 40.0% | |
| GAAGACCAATAGGTAGTTAC+AGG | + | chr4.1:9093471-9093490 | None:intergenic | 40.0% | |
| GAGCTGTCATCAAATACACA+AGG | - | chr4.1:9093713-9093732 | MS.gene70283:CDS | 40.0% | |
| GAGTAAAGAATTGGTCACAG+TGG | - | chr4.1:9092318-9092337 | MS.gene70283:intron | 40.0% | |
| GCAAAGATTGACAGACCAAT+GGG | - | chr4.1:9093600-9093619 | MS.gene70283:CDS | 40.0% | |
| GCATCTATGTCGAATACTCT+TGG | + | chr4.1:9090820-9090839 | None:intergenic | 40.0% | |
| GCCCAAAGAAGGTGATAATA+TGG | - | chr4.1:9090858-9090877 | MS.gene70283:intron | 40.0% | |
| GCCTAGACACAACATATAAC+AGG | + | chr4.1:9092958-9092977 | None:intergenic | 40.0% | |
| GCCTGTTATATGTTGTGTCT+AGG | - | chr4.1:9092954-9092973 | MS.gene70283:intron | 40.0% | |
| GTTCTTACATACAGATCCTG+AGG | - | chr4.1:9092747-9092766 | MS.gene70283:CDS | 40.0% | |
| GTTTATCCCAAACGAAACCA+CGG | - | chr4.1:9089565-9089584 | MS.gene70283:intron | 40.0% | |
| GTTTGGACAAAACGACAATC+TGG | + | chr4.1:9089829-9089848 | None:intergenic | 40.0% | |
| TAGATTTCTATCCTCCAAGG+TGG | + | chr4.1:9092834-9092853 | None:intergenic | 40.0% | |
| TAGGAATTAGGGTTTCCGTT+AGG | - | chr4.1:9089894-9089913 | MS.gene70283:CDS | 40.0% | |
| TCCCCATAGCTTTCTAAACT+TGG | - | chr4.1:9092360-9092379 | MS.gene70283:CDS | 40.0% | |
| TCTTATCAGGTGGAAACTCT+TGG | - | chr4.1:9090585-9090604 | MS.gene70283:intron | 40.0% | |
| TGAAATTTGCCGCTGCTATA+AGG | - | chr4.1:9092574-9092593 | MS.gene70283:CDS | 40.0% | |
| TGCAAAGATTGACAGACCAA+TGG | - | chr4.1:9093599-9093618 | MS.gene70283:CDS | 40.0% | |
| TGCTGATATTCCATCTCTAC+TGG | - | chr4.1:9090894-9090913 | MS.gene70283:intron | 40.0% | |
| TGGAAACAGACTATTCCCAT+TGG | + | chr4.1:9093618-9093637 | None:intergenic | 40.0% | |
| TTGGAAAGTGAAGGTAGTAG+GGG | - | chr4.1:9093387-9093406 | MS.gene70283:intron | 40.0% | |
| ! | AGCACCAACATATTTTCCTC+AGG | + | chr4.1:9092766-9092785 | None:intergenic | 40.0% |
| ! | ATTCGTTTTGCAGGCAAACA+TGG | - | chr4.1:9089661-9089680 | MS.gene70283:intron | 40.0% |
| ! | ATTTAGCGTTTTCCAGGCTT+TGG | + | chr4.1:9089804-9089823 | None:intergenic | 40.0% |
| ! | CAAAGCTGCTTTATGAACCA+TGG | + | chr4.1:9093742-9093761 | None:intergenic | 40.0% |
| ! | GAGGAAAATATGTTGGTGCT+TGG | - | chr4.1:9092766-9092785 | MS.gene70283:CDS | 40.0% |
| ! | GAGTTGCAAGATATCGATTG+CGG | + | chr4.1:9089771-9089790 | None:intergenic | 40.0% |
| ! | GCACTGTGATTGGACATTTT+TGG | - | chr4.1:9091742-9091761 | MS.gene70283:intron | 40.0% |
| ! | GCAGGATTTTCTTTGATGGA+CGG | + | chr4.1:9092614-9092633 | None:intergenic | 40.0% |
| ! | GGTTCATAAAGCAGCTTTGA+AGG | - | chr4.1:9093743-9093762 | MS.gene70283:CDS | 40.0% |
| ! | GTCTGGAATACAATTCGGTT+TGG | + | chr4.1:9089437-9089456 | None:intergenic | 40.0% |
| ! | TGAGGATATGCTTTTGATGC+TGG | - | chr4.1:9091129-9091148 | MS.gene70283:intron | 40.0% |
| ! | TGATGGGTAATCTTATCAGG+TGG | - | chr4.1:9090575-9090594 | MS.gene70283:intron | 40.0% |
| !! | AACACGAAAAAGGCATCAAG+TGG | + | chr4.1:9089875-9089894 | None:intergenic | 40.0% |
| !! | ATCAGAAATAGAGAGTACCG+TGG | + | chr4.1:9089585-9089604 | None:intergenic | 40.0% |
| !! | CTTGATGCCTTTTTCGTGTT+AGG | - | chr4.1:9089875-9089894 | MS.gene70283:intron | 40.0% |
| !! | GGTTGGTCTGGAATACAATT+CGG | + | chr4.1:9089442-9089461 | None:intergenic | 40.0% |
| !! | TTCTTGAGAGTATTTGGGCA+CGG | + | chr4.1:9090789-9090808 | None:intergenic | 40.0% |
| !!! | CCTGCTGATTTTATTCCTGT+AGG | - | chr4.1:9092629-9092648 | MS.gene70283:intron | 40.0% |
| AACTGGCATTACACACCTCT+AGG | + | chr4.1:9093287-9093306 | None:intergenic | 45.0% | |
| AATCTTTGCAACCAGAGCCT+TGG | + | chr4.1:9093589-9093608 | None:intergenic | 45.0% | |
| ACGTTGAGATTGAGAGAGCA+AGG | - | chr4.1:9090375-9090394 | MS.gene70283:CDS | 45.0% | |
| CATCCAATGGACAGCTCTTT+GGG | - | chr4.1:9093009-9093028 | MS.gene70283:intron | 45.0% | |
| CCTACTACCTTCACTTTCCA+AGG | + | chr4.1:9093388-9093407 | None:intergenic | 45.0% | |
| CCTTGGAAAGTGAAGGTAGT+AGG | - | chr4.1:9093385-9093404 | MS.gene70283:intron | 45.0% | |
| CGATTTCACAGTCAGTGAAG+TGG | + | chr4.1:9092401-9092420 | None:intergenic | 45.0% | |
| GAGAAGCAGATGAGATCAGA+CGG | - | chr4.1:9089722-9089741 | MS.gene70283:CDS | 45.0% | |
| GAGGTGTGTAATGCCAGTTA+TGG | - | chr4.1:9093288-9093307 | MS.gene70283:CDS | 45.0% | |
| GCAACGATGTTCTTAACTCG+TGG | - | chr4.1:9093652-9093671 | MS.gene70283:CDS | 45.0% | |
| GGAGAAGATGCTTGATCTTG+TGG | - | chr4.1:9093686-9093705 | MS.gene70283:CDS | 45.0% | |
| GTGGTTAGAAACGGGTCTTT+AGG | + | chr4.1:9089378-9089397 | None:intergenic | 45.0% | |
| TATGGTTGTTACCAAGGCTC+TGG | - | chr4.1:9093575-9093594 | MS.gene70283:CDS | 45.0% | |
| TCACCATGGAAGTCATCCAA+TGG | - | chr4.1:9092996-9093015 | MS.gene70283:intron | 45.0% | |
| TCATCCAATGGACAGCTCTT+TGG | - | chr4.1:9093008-9093027 | MS.gene70283:intron | 45.0% | |
| TGAAGGTAGTAGGGGAATTG+TGG | - | chr4.1:9093395-9093414 | MS.gene70283:intron | 45.0% | |
| TGAGATTGAGAGAGCAAGGT+TGG | - | chr4.1:9090379-9090398 | MS.gene70283:CDS | 45.0% | |
| TGCTTCAACTCCAGTAGAGA+TGG | + | chr4.1:9090907-9090926 | None:intergenic | 45.0% | |
| TGGATTATTAGAGTGGGAGG+TGG | - | chr4.1:9091659-9091678 | MS.gene70283:intron | 45.0% | |
| TGGTCACAGTGGAGTATATG+TGG | - | chr4.1:9092329-9092348 | MS.gene70283:intron | 45.0% | |
| TGTCCATTGGATGACTTCCA+TGG | + | chr4.1:9093002-9093021 | None:intergenic | 45.0% | |
| TTCTGATCCCCTTTCTCGAT+CGG | - | chr4.1:9089598-9089617 | MS.gene70283:intron | 45.0% | |
| TTGCATCAAATCAGCAGCCT+CGG | + | chr4.1:9090447-9090466 | None:intergenic | 45.0% | |
| ! | AGCCTTGGTAACAACCATAC+CGG | + | chr4.1:9093574-9093593 | None:intergenic | 45.0% |
| ! | CGGATTGGAGTACATGTTTG+TGG | - | chr4.1:9091448-9091467 | MS.gene70283:intron | 45.0% |
| ! | CTGGTCATTTAGCGTTTTCC+AGG | + | chr4.1:9089810-9089829 | None:intergenic | 45.0% |
| ! | TATACGTATTTGGTGGAGGG+CGG | - | chr4.1:9089266-9089285 | MS.gene70283:CDS | 45.0% |
| ! | TGGACAGAGTCTAGGGTTTA+AGG | - | chr4.1:9090034-9090053 | MS.gene70283:intron | 45.0% |
| !! | AGAGTACCGTGGTTTCGTTT+GGG | + | chr4.1:9089574-9089593 | None:intergenic | 45.0% |
| !! | CGTTGCTATCCTTTGCTGTT+TGG | + | chr4.1:9093638-9093657 | None:intergenic | 45.0% |
| !! | GGAATACAATTCGGTTTGGG+CGG | + | chr4.1:9089433-9089452 | None:intergenic | 45.0% |
| !!! | TAGGCTACTTTTGAAGCAGC+TGG | - | chr4.1:9092973-9092992 | MS.gene70283:intron | 45.0% |
| !!! | TATTTTATTTGTTTTTTAAT+GGG | - | chr4.1:9093496-9093515 | MS.gene70283:intron | 5.0% |
| !!! | TTATTTTATTTGTTTTTTAA+TGG | - | chr4.1:9093495-9093514 | MS.gene70283:intron | 5.0% |
| AACAGGCACACCCAATGACA+AGG | + | chr4.1:9092941-9092960 | None:intergenic | 50.0% | |
| AGATCAGACGGCGAAATTGC+CGG | - | chr4.1:9089734-9089753 | MS.gene70283:CDS | 50.0% | |
| AGTGGTTAACGCTAACCACG+CGG | - | chr4.1:9089299-9089318 | MS.gene70283:CDS | 50.0% | |
| CAAGTGGTACCTGCTTAAGC+TGG | + | chr4.1:9089859-9089878 | None:intergenic | 50.0% | |
| GAACAGTGTATCTGCTGGGA+AGG | - | chr4.1:9090240-9090259 | MS.gene70283:intron | 50.0% | |
| GTCAGGCAGGTGGTTAGAAA+CGG | + | chr4.1:9089387-9089406 | None:intergenic | 50.0% | |
| GTCCGGTATGGTTGTTACCA+AGG | - | chr4.1:9093569-9093588 | MS.gene70283:CDS | 50.0% | |
| GTGCAGTTGGACAGAGTCTA+GGG | - | chr4.1:9090027-9090046 | MS.gene70283:intron | 50.0% | |
| TAACTCGTGGGCAGCAAACT+TGG | - | chr4.1:9093665-9093684 | MS.gene70283:CDS | 50.0% | |
| TCAGGCAGGTGGTTAGAAAC+GGG | + | chr4.1:9089386-9089405 | None:intergenic | 50.0% | |
| TCTCCCAAAGAGCTGTCCAT+TGG | + | chr4.1:9093015-9093034 | None:intergenic | 50.0% | |
| TTGTATTCCAGACCAACCCG+CGG | - | chr4.1:9089444-9089463 | MS.gene70283:intron | 50.0% | |
| ! | AATACAGGGGCTTTTAGCCG+AGG | - | chr4.1:9090427-9090446 | MS.gene70283:CDS | 50.0% |
| ! | ACACATGCACCGATCGAGAA+AGG | + | chr4.1:9089610-9089629 | None:intergenic | 50.0% |
| ! | ACATGCACCGATCGAGAAAG+GGG | + | chr4.1:9089608-9089627 | None:intergenic | 50.0% |
| ! | CACATGCACCGATCGAGAAA+GGG | + | chr4.1:9089609-9089628 | None:intergenic | 50.0% |
| ! | GATTGCGGCTTTTCTTGTGC+CGG | + | chr4.1:9089756-9089775 | None:intergenic | 50.0% |
| ! | GCTTTTGTGTCTCAGCCTAG+AGG | - | chr4.1:9093269-9093288 | MS.gene70283:CDS | 50.0% |
| ! | TTTGAAGCAGCTGGTCACCA+TGG | - | chr4.1:9092982-9093001 | MS.gene70283:intron | 50.0% |
| !! | AATTCGGTTTGGGCGGATGT+CGG | + | chr4.1:9089426-9089445 | None:intergenic | 50.0% |
| !! | GAAGCTGAGAAGCATCTGTC+CGG | - | chr4.1:9093552-9093571 | MS.gene70283:CDS | 50.0% |
| !! | GAGAGTACCGTGGTTTCGTT+TGG | + | chr4.1:9089575-9089594 | None:intergenic | 50.0% |
| !! | GTCGTTTTGTCCAAACGACG+CGG | - | chr4.1:9089833-9089852 | MS.gene70283:intron | 50.0% |
| !! | TCTGCTTTGAAGCCAAAGCC+TGG | - | chr4.1:9089789-9089808 | MS.gene70283:intron | 50.0% |
| !! | TGAGAAGCATCTGTCCGGTA+TGG | - | chr4.1:9093557-9093576 | MS.gene70283:CDS | 50.0% |
| CCAATCACAGTGCACAGTGC+AGG | + | chr4.1:9091735-9091754 | None:intergenic | 55.0% | |
| CCTGCACTGTGCACTGTGAT+TGG | - | chr4.1:9091732-9091751 | MS.gene70283:intron | 55.0% | |
| GGTGCAGTTGGACAGAGTCT+AGG | - | chr4.1:9090026-9090045 | MS.gene70283:intron | 55.0% | |
| TTTGGGCACGGACATGATCC+TGG | + | chr4.1:9090777-9090796 | None:intergenic | 55.0% | |
| ! | CTGGACTGCATCGGTGAATG+TGG | + | chr4.1:9092800-9092819 | None:intergenic | 55.0% |
| !! | ATGTCGGTTTGTCGAGTCCG+CGG | + | chr4.1:9089410-9089429 | None:intergenic | 55.0% |
| !! | GGTGGAAACTCTTGGTGCCA+TGG | - | chr4.1:9090593-9090612 | MS.gene70283:intron | 55.0% |
| AATCCAGACCAACCGCGGGT+TGG | + | chr4.1:9089459-9089478 | None:intergenic | 60.0% | |
| AGCCCAATCCAGACCAACCG+CGG | + | chr4.1:9089464-9089483 | None:intergenic | 60.0% | |
| ATTCCAGACCAACCCGCGGT+TGG | - | chr4.1:9089448-9089467 | MS.gene70283:intron | 60.0% | |
| CATGCAGGCTGTGACAGCGA+TGG | - | chr4.1:9090147-9090166 | MS.gene70283:CDS | 60.0% | |
| CTTAAGCTGGCCGCGTCGTT+TGG | + | chr4.1:9089846-9089865 | None:intergenic | 60.0% | |
| GGACATGATCCTGGCGGTCT+AGG | + | chr4.1:9090768-9090787 | None:intergenic | 60.0% | |
| GGTTAACGCTAACCACGCGG+CGG | - | chr4.1:9089302-9089321 | MS.gene70283:CDS | 60.0% | |
| TGTGACAGCGATGGTCCAGC+AGG | - | chr4.1:9090156-9090175 | MS.gene70283:CDS | 60.0% | |
| !! | AACCCGCGGTTGGTCTGGAT+TGG | - | chr4.1:9089458-9089477 | MS.gene70283:intron | 60.0% |
| !! | ACCCGCGGTTGGTCTGGATT+GGG | - | chr4.1:9089459-9089478 | MS.gene70283:intron | 60.0% |
| !! | TGTCGGTTTGTCGAGTCCGC+GGG | + | chr4.1:9089409-9089428 | None:intergenic | 60.0% |
| ACGACGCGGCCAGCTTAAGC+AGG | - | chr4.1:9089847-9089866 | MS.gene70283:intron | 65.0% | |
| CTAACCACCTGCCTGACCCG+CGG | - | chr4.1:9089390-9089409 | MS.gene70283:CDS | 65.0% | |
| GAGGGCGGCTGTGTTTGCAG+TGG | - | chr4.1:9089281-9089300 | MS.gene70283:CDS | 65.0% | |
| GCCCAATCCAGACCAACCGC+GGG | + | chr4.1:9089463-9089482 | None:intergenic | 65.0% | |
| GGGCACGGACATGATCCTGG+CGG | + | chr4.1:9090774-9090793 | None:intergenic | 65.0% | |
| GTTTGTCGAGTCCGCGGGTC+AGG | + | chr4.1:9089404-9089423 | None:intergenic | 65.0% | |
| TAACGCTAACCACGCGGCGG+CGG | - | chr4.1:9089305-9089324 | MS.gene70283:CDS | 65.0% | |
| TCGACTCTGCCTAGACCGCC+AGG | - | chr4.1:9090756-9090775 | MS.gene70283:intron | 65.0% | |
| ! | AGACCAACCCGCGGTTGGTC+TGG | - | chr4.1:9089453-9089472 | MS.gene70283:intron | 65.0% |
| !! | AGACCAACCGCGGGTTGGTC+TGG | + | chr4.1:9089454-9089473 | None:intergenic | 65.0% |
| GAGTCCGCGGGTCAGGCAGG+TGG | + | chr4.1:9089397-9089416 | None:intergenic | 75.0% | |
| GTCGAGTCCGCGGGTCAGGC+AGG | + | chr4.1:9089400-9089419 | None:intergenic | 75.0% | |
| ! | ACGCGGCGGCGGCCGGAATC+TGG | - | chr4.1:9089316-9089335 | MS.gene70283:CDS | 80.0% |
| ! | AGATTCCGGCCGCCGCCGCG+TGG | + | chr4.1:9089317-9089336 | None:intergenic | 80.0% |
| ! | GCTAACCACGCGGCGGCGGC+CGG | - | chr4.1:9089309-9089328 | MS.gene70283:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 9089234 | 9093770 | 9089234 | ID=MS.gene70283 |
| chr4.1 | mRNA | 9089234 | 9093770 | 9089234 | ID=MS.gene70283.t1;Parent=MS.gene70283 |
| chr4.1 | exon | 9093535 | 9093770 | 9093535 | ID=MS.gene70283.t1.exon1;Parent=MS.gene70283.t1 |
| chr4.1 | CDS | 9093535 | 9093770 | 9093535 | ID=cds.MS.gene70283.t1;Parent=MS.gene70283.t1 |
| chr4.1 | exon | 9093418 | 9093457 | 9093418 | ID=MS.gene70283.t1.exon2;Parent=MS.gene70283.t1 |
| chr4.1 | CDS | 9093418 | 9093457 | 9093418 | ID=cds.MS.gene70283.t1;Parent=MS.gene70283.t1 |
| chr4.1 | exon | 9093136 | 9093330 | 9093136 | ID=MS.gene70283.t1.exon3;Parent=MS.gene70283.t1 |
| chr4.1 | CDS | 9093136 | 9093330 | 9093136 | ID=cds.MS.gene70283.t1;Parent=MS.gene70283.t1 |
| chr4.1 | exon | 9092743 | 9092850 | 9092743 | ID=MS.gene70283.t1.exon4;Parent=MS.gene70283.t1 |
| chr4.1 | CDS | 9092743 | 9092850 | 9092743 | ID=cds.MS.gene70283.t1;Parent=MS.gene70283.t1 |
| chr4.1 | exon | 9092529 | 9092633 | 9092529 | ID=MS.gene70283.t1.exon5;Parent=MS.gene70283.t1 |
| chr4.1 | CDS | 9092529 | 9092633 | 9092529 | ID=cds.MS.gene70283.t1;Parent=MS.gene70283.t1 |
| chr4.1 | exon | 9092354 | 9092410 | 9092354 | ID=MS.gene70283.t1.exon6;Parent=MS.gene70283.t1 |
| chr4.1 | CDS | 9092354 | 9092410 | 9092354 | ID=cds.MS.gene70283.t1;Parent=MS.gene70283.t1 |
| chr4.1 | exon | 9092054 | 9092250 | 9092054 | ID=MS.gene70283.t1.exon7;Parent=MS.gene70283.t1 |
| chr4.1 | CDS | 9092054 | 9092250 | 9092054 | ID=cds.MS.gene70283.t1;Parent=MS.gene70283.t1 |
| chr4.1 | exon | 9090358 | 9090457 | 9090358 | ID=MS.gene70283.t1.exon8;Parent=MS.gene70283.t1 |
| chr4.1 | CDS | 9090358 | 9090457 | 9090358 | ID=cds.MS.gene70283.t1;Parent=MS.gene70283.t1 |
| chr4.1 | exon | 9090131 | 9090243 | 9090131 | ID=MS.gene70283.t1.exon9;Parent=MS.gene70283.t1 |
| chr4.1 | CDS | 9090131 | 9090243 | 9090131 | ID=cds.MS.gene70283.t1;Parent=MS.gene70283.t1 |
| chr4.1 | exon | 9089878 | 9090028 | 9089878 | ID=MS.gene70283.t1.exon10;Parent=MS.gene70283.t1 |
| chr4.1 | CDS | 9089878 | 9090028 | 9089878 | ID=cds.MS.gene70283.t1;Parent=MS.gene70283.t1 |
| chr4.1 | exon | 9089714 | 9089791 | 9089714 | ID=MS.gene70283.t1.exon11;Parent=MS.gene70283.t1 |
| chr4.1 | CDS | 9089714 | 9089791 | 9089714 | ID=cds.MS.gene70283.t1;Parent=MS.gene70283.t1 |
| chr4.1 | exon | 9089234 | 9089452 | 9089234 | ID=MS.gene70283.t1.exon12;Parent=MS.gene70283.t1 |
| chr4.1 | CDS | 9089234 | 9089452 | 9089234 | ID=cds.MS.gene70283.t1;Parent=MS.gene70283.t1 |
| Gene Sequence |
| Protein sequence |
