AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene029604

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene029604.t1 MTR_1g107365 74.396 414 101 4 3 414 92 502 0.0 642
MS.gene029604.t1 MTR_1g107350 70.118 425 112 3 3 413 55 478 0.0 600
MS.gene029604.t1 MTR_1g107375 73.105 409 104 5 1 405 49 455 0.0 598
MS.gene029604.t1 MTR_3g049970 68.779 426 118 4 3 414 56 480 0.0 594
MS.gene029604.t1 MTR_1g107360 68.660 418 124 2 3 414 56 472 0.0 591
MS.gene029604.t1 MTR_1g107315 69.393 428 112 4 3 414 55 479 0.0 580
MS.gene029604.t1 MTR_1g032490 69.359 421 114 4 3 409 57 476 0.0 572
MS.gene029604.t1 MTR_1g107285 67.391 414 127 4 2 407 54 467 0.0 564
MS.gene029604.t1 MTR_8g064870 67.062 422 118 4 3 406 58 476 0.0 562
MS.gene029604.t1 MTR_8g064880 65.330 424 126 4 3 406 56 478 0.0 526
MS.gene029604.t1 MTR_1g107325 72.881 236 19 1 1 236 49 239 2.95e-113 336
MS.gene029604.t1 MTR_1g107325 93.750 144 9 0 271 414 220 363 1.00e-89 276
MS.gene029604.t1 MTR_1g107380 40.659 364 200 7 55 408 120 477 5.48e-86 270
MS.gene029604.t1 MTR_6g038230 38.919 370 209 8 39 400 91 451 1.31e-80 255
MS.gene029604.t1 MTR_1g107340 66.327 196 59 3 2 190 54 249 3.56e-79 245
MS.gene029604.t1 MTR_6g038200 36.410 390 223 11 27 400 71 451 1.03e-77 248
MS.gene029604.t1 MTR_5g035580 37.736 371 213 7 40 401 90 451 1.14e-77 248
MS.gene029604.t1 MTR_8g088560 35.864 382 226 8 34 405 87 459 4.86e-75 241
MS.gene029604.t1 MTR_6g038220 36.757 370 217 9 39 400 90 450 1.23e-74 240
MS.gene029604.t1 MTR_5g035560 36.729 373 218 7 40 403 88 451 1.55e-73 238
MS.gene029604.t1 MTR_8g083280 36.181 398 221 7 34 413 89 471 5.54e-73 236
MS.gene029604.t1 MTR_7g080950 36.559 372 221 7 39 403 84 447 6.55e-73 236
MS.gene029604.t1 MTR_4g095008 35.194 412 237 10 13 403 62 464 1.42e-72 237
MS.gene029604.t1 MTR_8g083290 34.606 393 227 10 33 403 79 463 9.64e-72 233
MS.gene029604.t1 MTR_3g084520 34.703 438 239 13 2 403 46 472 1.72e-70 230
MS.gene029604.t1 MTR_3g084530 36.591 399 214 11 35 403 83 472 3.18e-70 229
MS.gene029604.t1 MTR_6g038240 33.668 398 237 10 26 406 70 457 1.35e-69 227
MS.gene029604.t1 MTR_5g004940 46.591 264 96 6 156 408 153 382 2.76e-69 224
MS.gene029604.t1 MTR_5g004940 41.600 125 64 2 11 129 72 193 1.07e-21 96.7
MS.gene029604.t1 MTR_7g080935 35.561 374 222 9 39 403 89 452 1.17e-68 224
MS.gene029604.t1 MTR_6g038300 33.690 374 230 7 39 403 91 455 1.57e-68 224
MS.gene029604.t1 MTR_7g080940 34.140 372 230 7 39 403 89 452 4.79e-68 223
MS.gene029604.t1 MTR_3g084540 35.264 397 227 9 33 403 81 473 6.50e-68 223
MS.gene029604.t1 MTR_4g094920 35.211 426 239 12 1 403 68 479 2.88e-67 222
MS.gene029604.t1 MTR_7g080900 36.533 375 217 10 39 403 92 455 2.44e-65 216
MS.gene029604.t1 MTR_5g016480 32.933 416 248 13 10 403 64 470 4.75e-60 202
MS.gene029604.t1 MTR_5g464810 32.292 384 228 9 41 403 105 477 2.10e-59 201
MS.gene029604.t1 MTR_5g064240 32.292 384 228 9 41 403 105 477 2.10e-59 201
MS.gene029604.t1 MTR_6g014290 31.383 376 227 8 50 403 111 477 9.20e-58 196
MS.gene029604.t1 MTR_2g008210 30.548 383 234 8 44 403 103 476 1.51e-56 193
MS.gene029604.t1 MTR_6g014050 32.642 386 225 9 44 403 104 480 3.42e-56 192
MS.gene029604.t1 MTR_5g464760 32.190 379 223 9 44 397 104 473 2.09e-55 190
MS.gene029604.t1 MTR_6g013920 32.267 375 222 10 57 409 120 484 2.25e-55 190
MS.gene029604.t1 MTR_3g008010 30.667 375 231 8 50 403 111 477 3.14e-55 190
MS.gene029604.t1 MTR_6g013900 32.086 374 222 9 52 403 115 478 4.48e-55 189
MS.gene029604.t1 MTR_7g011470 30.964 394 243 9 28 403 83 465 5.87e-55 189
MS.gene029604.t1 MTR_6g014220 30.548 383 235 9 44 403 103 477 7.28e-54 186
MS.gene029604.t1 MTR_7g011470 30.576 399 234 11 28 403 83 461 9.36e-54 186
MS.gene029604.t1 MTR_6g014250 28.916 415 265 8 11 403 71 477 9.44e-54 186
MS.gene029604.t1 MTR_6g014040 30.390 385 235 10 44 403 104 480 1.49e-53 185
MS.gene029604.t1 MTR_3g479490 31.903 373 217 9 57 403 112 473 2.57e-53 184
MS.gene029604.t1 MTR_3g079480 31.522 368 211 10 57 396 127 481 3.90e-53 184
MS.gene029604.t1 MTR_6g014310 30.435 391 231 10 42 403 102 480 5.84e-53 184
MS.gene029604.t1 MTR_4g094220 29.716 387 243 8 41 404 99 479 9.64e-53 183
MS.gene029604.t1 MTR_6g011340 31.186 388 232 9 42 403 101 479 1.41e-52 183
MS.gene029604.t1 MTR_6g013960 30.412 388 237 8 41 403 100 479 1.62e-52 182
MS.gene029604.t1 MTR_0036s0220 30.469 384 235 9 41 403 105 477 2.15e-52 182
MS.gene029604.t1 MTR_6g013450 32.249 369 219 10 57 403 121 480 7.31e-52 181
MS.gene029604.t1 MTR_3g479520 29.223 373 227 8 57 403 121 482 5.52e-51 179
MS.gene029604.t1 MTR_6g013990 30.412 388 233 10 42 403 101 477 2.45e-50 177
MS.gene029604.t1 MTR_3g479610 35.424 271 145 7 150 403 55 312 4.10e-50 172
MS.gene029604.t1 MTR_6g014187 30.077 389 237 10 41 403 100 479 4.73e-50 176
MS.gene029604.t1 MTR_6g014170 30.607 379 224 12 44 403 103 461 6.09e-50 176
MS.gene029604.t1 MTR_6g013440 29.639 388 238 9 42 403 102 480 2.02e-49 174
MS.gene029604.t1 MTR_3g069710 38.889 270 145 7 143 403 193 451 4.59e-49 173
MS.gene029604.t1 MTR_6g014020 30.649 385 234 10 44 403 103 479 7.38e-49 173
MS.gene029604.t1 MTR_6g014270 30.412 388 235 9 42 403 100 478 2.25e-48 172
MS.gene029604.t1 MTR_4g485630 31.926 379 224 13 53 407 109 477 1.10e-47 169
MS.gene029604.t1 MTR_7g013180 32.143 392 223 11 27 400 75 441 1.16e-47 169
MS.gene029604.t1 MTR_6g014190 32.990 291 178 5 122 403 4 286 1.37e-47 164
MS.gene029604.t1 MTR_0891s0010 30.976 297 179 5 122 403 4 289 2.06e-47 164
MS.gene029604.t1 MTR_5g058320 32.840 338 197 9 87 403 136 464 5.71e-47 167
MS.gene029604.t1 MTR_0288s0020 28.395 405 237 11 27 403 81 460 1.22e-46 166
MS.gene029604.t1 MTR_8g059425 29.710 414 238 12 27 403 80 477 5.20e-46 165
MS.gene029604.t1 MTR_6g014200 29.974 387 238 9 42 403 98 476 5.28e-46 165
MS.gene029604.t1 MTR_6g014150 29.381 388 239 9 42 403 98 476 5.10e-45 162
MS.gene029604.t1 MTR_7g070610 30.053 376 221 13 60 404 123 487 1.13e-43 159
MS.gene029604.t1 MTR_4g064987 31.933 357 203 13 49 392 103 432 1.86e-43 157
MS.gene029604.t1 MTR_8g007585 37.864 206 114 3 204 403 194 391 3.02e-43 156
MS.gene029604.t1 MTR_8g012650 29.630 378 220 12 57 403 109 471 9.29e-43 156
MS.gene029604.t1 MTR_4g064987 31.476 359 208 13 49 392 103 438 2.51e-42 155
MS.gene029604.t1 MTR_3g479470 28.346 381 245 8 44 402 104 478 3.66e-42 155
MS.gene029604.t1 MTR_7g013200 30.194 361 220 9 50 400 98 436 1.70e-41 152
MS.gene029604.t1 MTR_7g080960 28.018 439 196 11 39 410 92 477 3.25e-41 152
MS.gene029604.t1 MTR_5g045970 26.582 395 254 12 38 403 105 492 5.90e-41 152
MS.gene029604.t1 MTR_7g046490 32.102 352 198 10 70 396 121 456 8.68e-41 150
MS.gene029604.t1 MTR_0477s0010 36.453 203 117 2 207 403 120 316 1.03e-40 147
MS.gene029604.t1 MTR_6g033660 30.084 359 196 12 78 407 135 467 1.48e-40 150
MS.gene029604.t1 MTR_8g077590 30.667 375 211 12 52 397 106 460 1.98e-40 150
MS.gene029604.t1 MTR_8g006730 33.977 259 141 6 158 397 213 460 2.12e-40 150
MS.gene029604.t1 MTR_7g070940 32.491 277 149 8 152 404 211 473 3.10e-40 149
MS.gene029604.t1 MTR_8g012745 28.460 383 229 14 57 410 109 475 3.19e-40 149
MS.gene029604.t1 MTR_8g012635 28.496 379 225 12 52 399 104 467 4.22e-40 149
MS.gene029604.t1 MTR_8g006710 33.333 267 148 6 157 404 211 466 4.80e-40 149
MS.gene029604.t1 MTR_0184s0040 34.848 264 135 10 157 396 223 473 5.61e-40 149
MS.gene029604.t1 MTR_0078s0190 34.848 264 135 10 157 396 223 473 5.61e-40 149
MS.gene029604.t1 MTR_2086s0010 38.333 180 95 3 231 403 1 171 5.76e-40 141
MS.gene029604.t1 MTR_1996s0010 38.333 180 95 3 231 403 1 171 5.76e-40 141
MS.gene029604.t1 MTR_4g031800 34.268 321 163 13 105 396 164 465 8.08e-40 148
MS.gene029604.t1 MTR_6g014240 33.198 247 148 4 166 403 208 446 1.03e-39 147
MS.gene029604.t1 MTR_6g033625 30.154 325 198 8 85 392 141 453 1.20e-39 147
MS.gene029604.t1 MTR_7g070660 30.159 378 213 14 60 404 121 480 1.51e-39 148
MS.gene029604.t1 MTR_5g098930 32.000 275 150 7 146 392 191 456 1.60e-39 147
MS.gene029604.t1 MTR_6g488280 31.698 265 144 7 157 399 211 460 1.93e-39 147
MS.gene029604.t1 MTR_0428s0010 31.698 265 144 7 157 399 211 460 1.93e-39 147
MS.gene029604.t1 MTR_7g071040 28.954 411 248 17 28 404 91 491 2.04e-39 147
MS.gene029604.t1 MTR_3g069690 30.791 354 224 10 54 396 99 442 3.03e-39 146
MS.gene029604.t1 MTR_7g070800 29.867 375 219 13 60 404 116 476 3.17e-39 147
MS.gene029604.t1 MTR_4g117980 27.569 399 243 16 39 405 99 483 3.58e-39 147
MS.gene029604.t1 MTR_8g027885 32.692 260 143 5 157 396 218 465 5.02e-39 146
MS.gene029604.t1 MTR_7g070910 29.223 373 228 13 60 404 121 485 5.24e-39 146
MS.gene029604.t1 MTR_6g033675 34.444 270 150 8 157 410 213 471 6.96e-39 146
MS.gene029604.t1 MTR_7g055710 27.182 401 255 12 32 402 89 482 1.08e-38 145
MS.gene029604.t1 MTR_7g102550 30.295 373 223 12 59 402 120 484 1.30e-38 145
MS.gene029604.t1 MTR_8g044140 28.684 380 236 12 61 413 87 458 1.37e-38 145
MS.gene029604.t1 MTR_7g070860 28.883 367 219 13 60 404 117 463 1.78e-38 145
MS.gene029604.t1 MTR_8g027870 32.692 260 143 6 157 396 218 465 1.87e-38 144
MS.gene029604.t1 MTR_0184s0030 33.969 262 143 6 150 392 206 456 2.65e-38 144
MS.gene029604.t1 MTR_8g009055 33.700 273 141 6 151 397 202 460 4.30e-38 143
MS.gene029604.t1 MTR_5g090610 31.615 291 160 8 142 404 182 461 4.81e-38 143
MS.gene029604.t1 MTR_8g465670 28.646 384 219 12 60 409 114 476 7.17e-38 143
MS.gene029604.t1 MTR_8g066610 28.926 363 237 10 60 404 119 478 8.20e-38 143
MS.gene029604.t1 MTR_6g033725 31.939 263 157 5 157 407 213 465 9.17e-38 142
MS.gene029604.t1 MTR_5g075440 29.972 357 233 8 57 403 106 455 1.12e-37 142
MS.gene029604.t1 MTR_5g090670 31.579 285 154 9 151 403 205 480 1.36e-37 142
MS.gene029604.t1 MTR_6g035185 32.353 238 136 5 191 405 249 484 1.38e-37 142
MS.gene029604.t1 MTR_4g108250 28.947 380 220 15 60 404 124 488 1.59e-37 142
MS.gene029604.t1 MTR_5g072860 28.011 357 235 8 59 403 119 465 1.83e-37 142
MS.gene029604.t1 MTR_5g072810 28.771 358 231 9 57 403 109 453 1.85e-37 141
MS.gene029604.t1 MTR_7g070740 28.877 374 227 12 60 404 121 484 2.04e-37 142
MS.gene029604.t1 MTR_6g005600 33.962 265 137 6 157 396 209 460 2.63e-37 141
MS.gene029604.t1 MTR_1g019510 29.808 312 169 8 123 397 159 457 2.98e-37 141
MS.gene029604.t1 MTR_5g070090 34.902 255 150 8 157 403 215 461 3.06e-37 141
MS.gene029604.t1 MTR_5g072830 30.337 356 224 11 57 403 108 448 3.41e-37 140
MS.gene029604.t1 MTR_5g019580 29.630 270 162 5 157 402 212 477 3.82e-37 141
MS.gene029604.t1 MTR_8g009067 33.333 267 134 8 157 396 90 339 3.96e-37 138
MS.gene029604.t1 MTR_5g019580 29.630 270 162 5 157 402 236 501 4.64e-37 141
MS.gene029604.t1 MTR_7g047030 27.436 390 221 12 53 405 104 468 4.92e-37 140
MS.gene029604.t1 MTR_7g047270 27.436 390 221 12 53 405 104 468 4.92e-37 140
MS.gene029604.t1 MTR_8g009050 35.955 267 131 10 157 397 208 460 5.18e-37 140
MS.gene029604.t1 MTR_5g031860 32.443 262 157 4 157 407 221 473 5.95e-37 140
MS.gene029604.t1 MTR_7g070780 27.200 375 232 13 60 404 121 484 6.39e-37 140
MS.gene029604.t1 MTR_6g023665 31.154 260 148 5 157 397 218 465 7.94e-37 140
MS.gene029604.t1 MTR_5g070040 36.111 252 134 9 157 392 215 455 8.23e-37 140
MS.gene029604.t1 MTR_8g009073 33.333 264 138 8 157 396 79 328 8.36e-37 137
MS.gene029604.t1 MTR_4g485620 29.086 361 234 11 60 403 99 454 8.42e-37 140
MS.gene029604.t1 MTR_5g031840 33.977 259 154 6 157 407 216 465 8.86e-37 140
MS.gene029604.t1 MTR_5g072840 30.812 357 221 13 57 403 108 448 9.16e-37 139
MS.gene029604.t1 MTR_7g117405 29.134 381 230 16 52 406 117 483 9.67e-37 140
MS.gene029604.t1 MTR_1g062380 31.636 275 161 6 153 403 222 493 9.71e-37 140
MS.gene029604.t1 MTR_5g072820 31.111 360 216 12 57 403 108 448 9.93e-37 139
MS.gene029604.t1 MTR_8g074550 31.392 309 155 9 150 413 202 498 1.06e-36 140
MS.gene029604.t1 MTR_6g014300 26.630 368 224 9 57 403 123 465 1.17e-36 139
MS.gene029604.t1 MTR_7g102490 31.387 274 164 8 155 406 218 489 1.42e-36 140
MS.gene029604.t1 MTR_8g009067 33.209 268 135 8 157 397 208 458 1.55e-36 139
MS.gene029604.t1 MTR_6g035265 32.353 238 136 5 191 405 240 475 1.60e-36 139
MS.gene029604.t1 MTR_4g128690 27.528 356 235 6 52 401 112 450 2.07e-36 139
MS.gene029604.t1 MTR_4g117890 27.865 384 233 13 50 405 109 476 2.67e-36 139
MS.gene029604.t1 MTR_8g043470 36.019 211 120 4 203 406 179 381 3.17e-36 137
MS.gene029604.t1 MTR_8g009073 33.208 265 139 8 157 397 208 458 3.68e-36 138
MS.gene029604.t1 MTR_3g031450 29.700 367 241 8 57 414 109 467 5.16e-36 138
MS.gene029604.t1 MTR_1g040310 27.835 388 249 12 40 404 105 484 5.66e-36 138
MS.gene029604.t1 MTR_6g033615 29.499 339 196 10 73 392 125 439 5.82e-36 137
MS.gene029604.t1 MTR_8g009063 31.293 294 160 7 147 414 205 482 6.99e-36 137
MS.gene029604.t1 MTR_5g090630 32.975 279 148 9 142 392 187 454 7.53e-36 137
MS.gene029604.t1 MTR_5g040030 26.031 388 260 10 40 404 105 488 7.61e-36 138
MS.gene029604.t1 MTR_5g090600 28.974 390 224 14 41 403 94 457 7.68e-36 137
MS.gene029604.t1 MTR_7g013220 28.767 365 220 12 50 400 109 447 9.15e-36 137
MS.gene029604.t1 MTR_2g059240 29.396 364 227 12 57 403 118 468 9.24e-36 137
MS.gene029604.t1 MTR_3g009510 31.769 277 149 7 150 396 203 469 9.50e-36 137
MS.gene029604.t1 MTR_5g090660 30.389 283 156 7 158 411 210 480 1.00e-35 138
MS.gene029604.t1 MTR_0536s0020 28.052 385 229 14 50 404 114 480 1.01e-35 137
MS.gene029604.t1 MTR_8g012730 36.058 208 109 4 214 399 99 304 1.35e-35 133
MS.gene029604.t1 MTR_5g090700 26.667 390 228 12 41 392 96 465 1.37e-35 137
MS.gene029604.t1 MTR_7g102460 31.136 273 165 8 155 406 217 487 2.98e-35 136
MS.gene029604.t1 MTR_7g070930 32.734 278 155 10 153 404 217 488 3.24e-35 136
MS.gene029604.t1 MTR_7g013240 33.333 225 128 7 182 400 228 436 3.32e-35 135
MS.gene029604.t1 MTR_8g008970 32.836 268 136 8 157 397 208 458 3.75e-35 138
MS.gene029604.t1 MTR_8g008970 33.080 263 147 8 147 397 537 782 1.21e-30 125
MS.gene029604.t1 MTR_6g014185 33.333 255 125 8 157 403 127 344 4.04e-35 133
MS.gene029604.t1 MTR_7g070810 31.047 277 156 9 152 404 211 476 4.23e-35 135
MS.gene029604.t1 MTR_0078s0010 27.559 381 214 13 53 396 104 459 6.28e-35 135
MS.gene029604.t1 MTR_5g031830 32.422 256 157 4 158 404 223 471 7.08e-35 135
MS.gene029604.t1 MTR_2g035040 26.720 378 232 12 60 405 24 388 7.17e-35 133
MS.gene029604.t1 MTR_8g012630 34.762 210 113 3 212 399 204 411 9.17e-35 133
MS.gene029604.t1 MTR_7g117170 33.202 253 131 7 182 410 245 483 9.47e-35 134
MS.gene029604.t1 MTR_4g008630 32.114 246 142 5 174 405 230 464 1.40e-34 134
MS.gene029604.t1 MTR_0078s0060 32.075 265 141 10 157 396 208 458 1.52e-34 134
MS.gene029604.t1 MTR_5g090580 29.781 319 169 11 127 403 173 478 1.95e-34 134
MS.gene029604.t1 MTR_4g117960 34.583 240 128 8 191 405 247 482 2.31e-34 133
MS.gene029604.t1 MTR_4g128720 27.049 366 238 5 45 401 108 453 2.64e-34 133
MS.gene029604.t1 MTR_8g008990 32.342 269 140 7 157 397 208 462 3.13e-34 133
MS.gene029604.t1 MTR_3g031400 28.455 369 248 7 44 408 98 454 3.43e-34 133
MS.gene029604.t1 MTR_8g006220 32.534 292 151 7 151 409 206 484 6.95e-34 132
MS.gene029604.t1 MTR_5g090620 30.137 292 163 9 142 403 195 475 1.07e-33 131
MS.gene029604.t1 MTR_5g039900 27.322 366 241 10 60 404 123 484 1.10e-33 132
MS.gene029604.t1 MTR_4g118000 31.071 280 161 11 153 406 196 469 1.11e-33 131
MS.gene029604.t1 MTR_7g013260 32.444 225 130 6 182 400 229 437 1.38e-33 130
MS.gene029604.t1 MTR_1g019520 37.019 208 104 5 212 397 4 206 1.41e-33 125
MS.gene029604.t1 MTR_7g071050 35.176 199 118 3 208 397 227 423 1.93e-33 130
MS.gene029604.t1 MTR_2g046820 30.877 285 165 7 142 405 191 464 1.98e-33 130
MS.gene029604.t1 MTR_5g027210 30.479 292 163 9 148 408 204 486 2.22e-33 130
MS.gene029604.t1 MTR_4g485640 30.892 314 178 12 105 392 355 655 2.36e-33 132
MS.gene029604.t1 MTR_4g024020 28.141 398 210 17 57 405 119 489 3.80e-33 130
MS.gene029604.t1 MTR_1g029540 34.272 213 120 4 210 405 252 461 4.31e-33 129
MS.gene029604.t1 MTR_6g013680 27.344 384 200 13 42 403 48 374 4.82e-33 128
MS.gene029604.t1 MTR_0536s0010 28.244 393 231 19 45 405 105 478 4.84e-33 130
MS.gene029604.t1 MTR_7g012120 27.202 386 223 12 57 405 121 485 5.08e-33 130
MS.gene029604.t1 MTR_4g117950 28.431 408 238 19 26 404 81 463 9.74e-33 129
MS.gene029604.t1 MTR_5g016660 28.000 375 228 15 61 404 121 484 1.04e-32 129
MS.gene029604.t1 MTR_7g102450 27.926 376 232 14 60 406 109 474 1.15e-32 129
MS.gene029604.t1 MTR_7g102560 28.413 271 172 6 155 403 213 483 2.81e-32 127
MS.gene029604.t1 MTR_7g102520 32.301 226 132 6 199 403 263 488 5.16e-32 127
MS.gene029604.t1 MTR_7g470610 34.146 205 120 6 155 346 73 275 9.03e-32 122
MS.gene029604.t1 MTR_7g070583 34.146 205 120 6 155 346 73 275 9.03e-32 122
MS.gene029604.t1 MTR_5g098960 28.354 328 199 10 33 340 82 393 9.67e-32 125
MS.gene029604.t1 MTR_2g046750 30.357 280 163 7 147 405 199 467 1.19e-31 125
MS.gene029604.t1 MTR_4g082820 29.900 301 188 9 119 404 172 464 1.43e-31 125
MS.gene029604.t1 MTR_8g090095 32.701 211 125 3 212 405 271 481 5.00e-31 124
MS.gene029604.t1 MTR_2g034990 27.225 382 231 14 57 405 116 483 5.44e-31 124
MS.gene029604.t1 MTR_5g029800 31.321 265 156 7 163 405 219 479 6.05e-31 124
MS.gene029604.t1 MTR_4g082810 31.884 276 154 8 86 338 138 402 8.11e-31 122
MS.gene029604.t1 MTR_4g485590 34.649 228 129 8 153 370 188 405 1.38e-30 122
MS.gene029604.t1 MTR_8g006260 25.199 377 234 11 53 399 107 465 1.42e-30 122
MS.gene029604.t1 MTR_5g045960 26.410 390 237 13 48 403 112 485 1.72e-30 122
MS.gene029604.t1 MTR_2g040530 28.307 378 229 11 52 405 107 466 2.63e-30 122
MS.gene029604.t1 MTR_6g035295 27.000 400 260 13 30 404 93 485 3.98e-30 122
MS.gene029604.t1 MTR_8g006270 30.859 256 149 6 157 392 205 452 4.86e-30 121
MS.gene029604.t1 MTR_5g087620 31.734 271 154 9 158 403 229 493 5.48e-30 121
MS.gene029604.t1 MTR_8g032950 32.189 233 132 6 197 405 252 482 1.22e-29 120
MS.gene029604.t1 MTR_2g098430 27.344 384 220 16 60 405 119 481 1.24e-29 120
MS.gene029604.t1 MTR_6g014160 29.667 300 166 10 43 323 84 357 1.40e-29 119
MS.gene029604.t1 MTR_2g035020 26.385 379 238 12 57 405 116 483 2.42e-29 119
MS.gene029604.t1 MTR_5g067170 25.581 387 232 12 57 405 113 481 2.98e-29 119
MS.gene029604.t1 MTR_5g066390 34.595 185 106 3 225 403 39 214 3.75e-29 113
MS.gene029604.t1 MTR_0009s0240 29.434 265 159 7 158 408 213 463 4.15e-29 118
MS.gene029604.t1 MTR_8g071070 27.922 308 183 11 116 408 190 473 1.41e-28 117
MS.gene029604.t1 MTR_7g039550 31.381 239 146 6 183 404 25 262 3.22e-28 112
MS.gene029604.t1 MTR_7g070870 33.500 200 116 6 152 341 218 410 1.76e-27 114
MS.gene029604.t1 MTR_8g009840 35.545 211 100 7 229 413 333 533 4.77e-27 113
MS.gene029604.t1 MTR_6g078320 28.383 303 172 12 115 391 184 467 6.26e-27 112
MS.gene029604.t1 MTR_5g072850 32.530 249 139 7 157 403 160 381 8.70e-27 110
MS.gene029604.t1 MTR_7g070760 32.124 193 108 4 153 341 29 202 1.56e-26 106
MS.gene029604.t1 MTR_3g009490 35.556 180 94 4 238 396 3 181 1.67e-26 105
MS.gene029604.t1 MTR_8g007565 33.333 207 116 5 210 404 267 463 1.46e-24 105
MS.gene029604.t1 MTR_8g007650 33.333 207 116 5 210 404 267 463 2.76e-24 104
MS.gene029604.t1 MTR_5g066410 35.638 188 104 4 210 389 243 421 6.48e-24 103
MS.gene029604.t1 MTR_2g008225 31.325 249 154 8 141 380 203 443 9.39e-24 103
MS.gene029604.t1 MTR_6g014000 36.719 128 75 1 272 399 30 151 1.36e-23 102
MS.gene029604.t1 MTR_8g466240 25.385 390 249 15 41 405 83 455 1.94e-23 102
MS.gene029604.t1 MTR_4g123553 32.787 244 146 8 140 375 200 433 2.51e-23 102
MS.gene029604.t1 MTR_0536s0030 37.255 153 85 5 263 404 200 352 3.44e-23 100
MS.gene029604.t1 MTR_8g068340 38.411 151 73 4 213 354 271 410 5.56e-23 100
MS.gene029604.t1 MTR_8g068330 27.652 264 161 8 156 406 217 463 8.31e-23 100
MS.gene029604.t1 MTR_5g090690 35.669 157 76 5 169 307 155 304 8.70e-23 99.4
MS.gene029604.t1 MTR_2g008226 31.839 223 140 6 158 375 227 442 1.75e-22 99.4
MS.gene029604.t1 MTR_2g008220 30.827 266 157 10 134 380 185 442 2.09e-22 99.4
MS.gene029604.t1 MTR_8g068360 37.500 160 80 4 204 354 261 409 3.63e-22 98.6
MS.gene029604.t1 MTR_1g090270 29.644 253 140 8 148 380 208 442 8.63e-22 97.4
MS.gene029604.t1 MTR_2g046620 31.140 228 139 6 157 375 216 434 3.08e-21 95.9
MS.gene029604.t1 MTR_4g079250 32.227 211 116 7 161 359 217 412 5.97e-21 95.1
MS.gene029604.t1 MTR_4g059370 27.200 250 150 7 148 380 135 369 8.19e-21 94.0
MS.gene029604.t1 MTR_7g070995 31.469 143 87 4 272 404 4 145 9.83e-21 88.6
MS.gene029604.t1 MTR_7g067330 31.336 217 129 8 168 380 206 406 1.81e-20 93.2
MS.gene029604.t1 MTR_6g014186 23.969 388 222 12 42 403 98 438 2.17e-20 93.2
MS.gene029604.t1 MTR_4g077960 30.736 231 144 7 158 380 193 415 4.00e-20 92.4
MS.gene029604.t1 MTR_2g014900 27.381 252 155 7 142 380 197 433 1.05e-19 91.3
MS.gene029604.t1 MTR_7g067120 30.876 217 130 8 168 380 206 406 1.89e-19 90.1
MS.gene029604.t1 MTR_6g042310 31.169 231 147 7 158 382 219 443 4.97e-19 89.4
MS.gene029604.t1 MTR_4g079270 30.332 211 120 7 161 359 217 412 6.90e-19 88.6
MS.gene029604.t1 MTR_8g056740 27.530 247 163 7 105 341 62 302 3.26e-18 86.3
MS.gene029604.t1 MTR_6g036650 30.435 230 146 6 158 380 226 448 5.40e-18 86.3
MS.gene029604.t1 MTR_6g013435 26.198 313 174 11 102 403 40 306 2.11e-17 82.8
MS.gene029604.t1 MTR_3g435310 31.937 191 118 5 195 375 204 392 3.03e-16 80.5
MS.gene029604.t1 MTR_1g090280 31.847 157 94 4 237 380 136 292 2.17e-15 77.0
MS.gene029604.t1 MTR_2g083480 29.148 223 132 7 168 379 227 434 5.25e-15 77.0
MS.gene029604.t1 MTR_2g083380 31.220 205 114 7 163 355 236 425 3.06e-14 74.7
MS.gene029604.t1 MTR_2g009740 39.000 100 54 2 207 299 197 296 1.49e-13 71.2
MS.gene029604.t1 MTR_2g083430 30.899 178 111 5 214 380 259 435 2.24e-13 72.0
MS.gene029604.t1 MTR_2g083420 25.893 224 127 8 163 379 219 410 3.77e-13 71.2
MS.gene029604.t1 MTR_2g083390 27.638 199 113 7 163 359 219 388 4.56e-13 70.9
MS.gene029604.t1 MTR_6g052375 32.749 171 92 8 127 283 31 192 2.67e-12 67.8
MS.gene029604.t1 MTR_2g083490 28.767 219 129 7 149 355 205 408 1.56e-11 66.2
MS.gene029604.t1 MTR_0475s0030 39.437 71 37 1 287 357 8 72 9.40e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene029604.t1 AT4G15480 47.754 423 197 8 1 403 60 478 4.17e-129 381
MS.gene029604.t1 AT3G21560 44.931 434 212 8 1 412 53 481 8.40e-125 370
MS.gene029604.t1 AT4G15500 45.047 424 215 10 3 414 57 474 7.35e-119 354
MS.gene029604.t1 AT4G15490 42.459 431 220 10 1 410 50 473 3.91e-114 342
MS.gene029604.t1 AT2G23260 36.623 385 209 10 36 403 87 453 2.23e-73 237
MS.gene029604.t1 AT2G43820 33.573 417 249 14 3 406 48 449 9.32e-71 229
MS.gene029604.t1 AT2G23250 36.141 368 221 8 40 403 78 435 8.85e-70 227
MS.gene029604.t1 AT1G05680 33.002 403 246 11 10 400 59 449 2.33e-65 216
MS.gene029604.t1 AT2G31790 33.053 357 226 6 54 400 100 453 2.46e-65 216
MS.gene029604.t1 AT1G05675 34.959 369 216 9 46 400 91 449 3.49e-65 215
MS.gene029604.t1 AT4G15550 32.518 409 243 10 13 402 78 472 1.97e-64 214
MS.gene029604.t1 AT4G14090 34.135 416 243 12 5 402 52 454 2.02e-64 213
MS.gene029604.t1 AT2G43840 32.976 373 230 10 40 404 87 447 3.33e-64 213
MS.gene029604.t1 AT2G43840 32.976 373 230 10 40 404 87 447 1.14e-63 211
MS.gene029604.t1 AT2G31750 33.333 402 233 14 26 405 68 456 1.20e-60 203
MS.gene029604.t1 AT2G31750 33.333 402 233 14 26 405 68 456 2.13e-60 204
MS.gene029604.t1 AT1G05560 33.495 412 227 12 26 410 67 458 3.39e-60 202
MS.gene029604.t1 AT1G05560 33.495 412 227 12 26 410 117 508 1.32e-59 202
MS.gene029604.t1 AT1G22340 33.073 384 220 11 50 404 112 487 1.55e-59 201
MS.gene029604.t1 AT1G24100 31.496 381 245 9 36 405 85 460 2.20e-56 192
MS.gene029604.t1 AT1G22400 31.522 368 219 11 41 385 105 462 5.16e-56 192
MS.gene029604.t1 AT1G05530 31.111 405 235 10 26 403 67 454 2.03e-55 190
MS.gene029604.t1 AT1G22380 31.892 370 221 10 57 403 119 480 2.56e-55 190
MS.gene029604.t1 AT1G78270 31.034 377 229 11 50 403 112 480 2.49e-54 187
MS.gene029604.t1 AT2G15490 29.612 412 261 10 13 406 80 480 1.18e-53 186
MS.gene029604.t1 AT2G15490 29.398 415 261 10 13 406 80 483 2.98e-53 184
MS.gene029604.t1 AT1G22360 29.351 385 239 10 44 403 101 477 4.87e-53 184
MS.gene029604.t1 AT2G36970 29.620 368 225 9 57 406 122 473 1.78e-51 180
MS.gene029604.t1 AT1G22360 28.571 385 230 10 44 403 101 465 3.56e-50 176
MS.gene029604.t1 AT2G15480 28.710 411 266 11 13 406 83 483 6.65e-50 176
MS.gene029604.t1 AT2G15480 27.791 421 267 12 13 406 83 493 4.48e-47 168
MS.gene029604.t1 AT1G22370 28.871 381 241 10 44 403 104 475 1.24e-46 167
MS.gene029604.t1 AT4G34131 29.238 407 260 14 13 402 83 478 1.46e-43 159
MS.gene029604.t1 AT4G34135 29.829 409 258 12 13 403 84 481 6.05e-43 157
MS.gene029604.t1 AT5G59580 29.178 377 234 12 41 404 92 448 1.27e-42 155
MS.gene029604.t1 AT5G17050 27.937 383 251 7 36 411 95 459 1.47e-42 155
MS.gene029604.t1 AT1G30530 28.042 378 248 7 36 405 91 452 1.56e-42 155
MS.gene029604.t1 AT4G34138 28.810 420 269 14 1 403 72 478 6.05e-42 154
MS.gene029604.t1 AT5G14860 31.332 383 228 15 41 405 112 477 6.91e-42 154
MS.gene029604.t1 AT2G36770 32.841 271 162 7 155 406 222 491 1.48e-41 153
MS.gene029604.t1 AT2G28080 29.477 363 227 9 58 406 127 474 1.49e-41 153
MS.gene029604.t1 AT1G22370 30.612 294 184 6 122 403 20 305 2.04e-41 149
MS.gene029604.t1 AT5G59590 28.986 414 238 13 23 403 59 449 3.98e-41 151
MS.gene029604.t1 AT2G36780 33.088 272 162 7 155 407 222 492 7.58e-41 151
MS.gene029604.t1 AT5G17040 26.882 372 256 5 36 405 84 441 2.35e-40 149
MS.gene029604.t1 AT5G17040 33.463 257 158 4 151 405 94 339 2.36e-40 147
MS.gene029604.t1 AT3G11340 38.384 198 108 3 208 397 247 438 3.35e-40 149
MS.gene029604.t1 AT2G36750 34.815 270 156 8 155 405 217 485 4.27e-40 149
MS.gene029604.t1 AT1G10400 31.519 349 221 10 58 397 117 456 5.20e-40 149
MS.gene029604.t1 AT3G55710 36.800 250 140 5 157 397 208 448 8.24e-40 148
MS.gene029604.t1 AT3G55700 37.154 253 129 7 157 397 210 444 1.10e-39 147
MS.gene029604.t1 AT3G21790 27.536 414 229 11 41 408 95 483 1.19e-39 148
MS.gene029604.t1 AT3G46670 29.032 372 211 13 58 404 106 449 2.02e-39 147
MS.gene029604.t1 AT3G16520 35.206 267 146 8 150 402 205 458 2.96e-39 146
MS.gene029604.t1 AT4G01070 32.955 264 144 5 157 398 210 462 3.63e-39 147
MS.gene029604.t1 AT3G53160 31.136 273 166 8 155 407 216 486 5.53e-39 146
MS.gene029604.t1 AT3G46660 29.570 372 220 11 53 404 107 456 6.00e-39 145
MS.gene029604.t1 AT5G17030 31.765 255 161 4 151 403 212 455 8.52e-39 145
MS.gene029604.t1 AT2G30140 30.168 358 229 8 54 403 107 451 1.14e-38 145
MS.gene029604.t1 AT2G36800 34.050 279 156 10 155 410 221 494 1.44e-38 145
MS.gene029604.t1 AT3G46700 27.945 365 224 9 58 404 102 445 1.63e-38 144
MS.gene029604.t1 AT2G30140 29.722 360 227 7 54 403 107 450 2.50e-38 144
MS.gene029604.t1 AT3G46680 30.411 365 200 13 58 397 108 443 2.61e-38 144
MS.gene029604.t1 AT2G36760 32.841 271 162 8 155 406 222 491 2.86e-38 144
MS.gene029604.t1 AT5G05870 29.008 393 221 13 41 403 90 454 3.23e-38 144
MS.gene029604.t1 AT3G46650 29.661 354 204 9 58 399 108 428 4.44e-38 143
MS.gene029604.t1 AT3G46690 28.771 358 216 10 58 397 107 443 7.53e-38 142
MS.gene029604.t1 AT3G02100 37.004 227 132 4 180 406 247 462 1.17e-37 142
MS.gene029604.t1 AT2G30150 28.729 362 233 10 55 405 91 438 2.67e-37 140
MS.gene029604.t1 AT3G16520 35.714 252 135 8 150 387 205 443 2.68e-37 141
MS.gene029604.t1 AT3G16520 35.714 252 135 8 150 387 205 443 3.08e-37 141
MS.gene029604.t1 AT5G66690 30.827 266 139 5 157 392 204 454 3.14e-37 141
MS.gene029604.t1 AT3G50740 31.321 265 139 6 157 391 209 460 3.92e-37 141
MS.gene029604.t1 AT2G30150 28.729 362 233 10 55 405 107 454 4.11e-37 140
MS.gene029604.t1 AT2G16890 28.729 362 233 10 58 405 119 469 6.93e-37 140
MS.gene029604.t1 AT5G26310 29.412 272 145 6 157 396 204 460 1.78e-36 139
MS.gene029604.t1 AT4G15280 25.445 393 225 8 53 403 107 473 4.43e-36 138
MS.gene029604.t1 AT5G03490 28.226 372 246 12 41 405 107 464 4.52e-36 138
MS.gene029604.t1 AT4G15280 25.445 393 225 8 53 403 139 505 8.68e-36 138
MS.gene029604.t1 AT1G07250 33.591 259 152 6 157 403 222 472 9.04e-36 137
MS.gene029604.t1 AT3G21800 29.474 285 161 7 149 405 205 477 1.24e-35 137
MS.gene029604.t1 AT5G38040 25.549 364 242 7 53 403 102 449 2.62e-35 135
MS.gene029604.t1 AT3G21760 29.710 276 156 6 157 405 218 482 3.17e-35 136
MS.gene029604.t1 AT1G01420 31.939 263 145 5 157 397 210 460 6.31e-35 135
MS.gene029604.t1 AT1G01420 31.939 263 145 5 157 397 213 463 7.61e-35 135
MS.gene029604.t1 AT2G36790 32.616 279 160 8 155 410 221 494 9.42e-35 135
MS.gene029604.t1 AT1G51210 29.211 380 240 12 8 375 67 429 1.08e-34 134
MS.gene029604.t1 AT4G15260 28.571 329 174 10 105 403 57 354 1.85e-34 131
MS.gene029604.t1 AT3G21750 34.091 220 113 4 211 403 254 468 2.61e-34 133
MS.gene029604.t1 AT3G46720 35.586 222 128 4 177 397 227 434 2.66e-34 132
MS.gene029604.t1 AT2G29740 31.727 249 147 6 157 392 225 463 2.73e-34 133
MS.gene029604.t1 AT3G22250 35.193 233 129 8 160 376 215 441 3.13e-34 132
MS.gene029604.t1 AT4G36770 31.418 261 130 8 157 386 204 446 6.86e-34 132
MS.gene029604.t1 AT2G29730 30.837 227 144 5 183 403 243 462 1.03e-33 131
MS.gene029604.t1 AT1G01390 33.600 250 126 7 157 377 210 448 1.88e-33 131
MS.gene029604.t1 AT1G01390 33.600 250 126 7 157 377 227 465 2.20e-33 131
MS.gene029604.t1 AT5G38010 28.045 353 225 8 58 397 111 447 2.40e-33 130
MS.gene029604.t1 AT2G29710 31.602 231 144 6 180 403 239 462 3.76e-33 130
MS.gene029604.t1 AT1G07260 30.739 257 163 5 157 403 220 471 4.04e-33 130
MS.gene029604.t1 AT3G21780 29.818 275 155 7 157 405 208 470 4.27e-33 130
MS.gene029604.t1 AT5G05880 34.000 200 116 3 206 397 251 442 8.11e-33 129
MS.gene029604.t1 AT5G05860 35.266 207 118 4 205 403 249 447 1.48e-32 128
MS.gene029604.t1 AT1G73880 30.502 259 160 7 155 403 218 466 1.04e-31 126
MS.gene029604.t1 AT2G18560 31.698 265 143 6 157 396 118 369 1.07e-31 124
MS.gene029604.t1 AT2G29750 31.154 260 155 7 157 403 225 473 1.19e-31 126
MS.gene029604.t1 AT2G18570 30.534 262 150 7 157 396 208 459 4.13e-31 124
MS.gene029604.t1 AT2G26480 26.509 381 240 13 35 397 81 439 3.93e-29 118
MS.gene029604.t1 AT5G05900 32.143 252 150 8 157 403 212 447 1.59e-28 116
MS.gene029604.t1 AT5G05890 29.600 250 154 6 163 403 216 452 2.86e-28 116
MS.gene029604.t1 AT5G12890 30.108 279 152 9 158 410 227 488 3.31e-28 116
MS.gene029604.t1 AT2G16890 28.296 311 199 9 58 355 119 418 3.77e-28 115
MS.gene029604.t1 AT3G53150 25.128 390 237 12 57 403 132 509 9.32e-28 115
MS.gene029604.t1 AT1G07240 27.157 313 188 10 114 403 180 475 2.07e-27 114
MS.gene029604.t1 AT1G06000 28.148 270 167 8 152 403 173 433 2.79e-27 113
MS.gene029604.t1 AT5G65550 27.778 360 219 12 44 380 98 439 2.84e-26 110
MS.gene029604.t1 AT5G37950 33.136 169 98 3 157 317 184 345 6.85e-24 102
MS.gene029604.t1 AT5G37950 33.136 169 98 3 157 317 178 339 6.88e-24 102
MS.gene029604.t1 AT5G49690 30.180 222 143 6 156 375 216 427 4.04e-23 101
MS.gene029604.t1 AT4G27570 29.617 287 150 11 139 404 189 444 5.76e-22 97.8
MS.gene029604.t1 AT4G27560 29.268 287 151 11 139 404 189 444 5.62e-21 95.1
MS.gene029604.t1 AT5G54060 27.273 297 186 9 120 403 183 462 2.80e-20 93.2
MS.gene029604.t1 AT5G54010 24.863 366 224 11 61 405 110 445 3.34e-19 89.7
MS.gene029604.t1 AT1G64910 27.481 262 146 9 159 399 199 437 7.04e-19 88.6
MS.gene029604.t1 AT5G53990 29.534 193 112 5 159 340 199 378 3.50e-18 86.7
MS.gene029604.t1 AT3G29630 27.059 255 159 7 157 397 197 438 1.12e-17 85.1
MS.gene029604.t1 AT2G22590 27.386 241 144 7 173 401 243 464 4.31e-17 83.6
MS.gene029604.t1 AT2G23210 33.333 219 126 9 20 227 65 274 1.10e-16 80.5
MS.gene029604.t1 AT1G64920 25.461 271 170 9 157 410 197 452 1.65e-16 81.6
MS.gene029604.t1 AT1G50580 27.378 347 216 11 61 394 110 433 1.72e-16 81.6
MS.gene029604.t1 AT3G29630 27.982 218 143 5 191 397 198 412 2.48e-15 77.8
MS.gene029604.t1 AT2G22930 28.061 196 115 5 157 340 197 378 1.08e-14 75.9
MS.gene029604.t1 AT4G09500 28.718 195 115 5 157 340 197 378 3.63e-14 74.3
MS.gene029604.t1 AT4G01070 32.653 147 68 4 157 282 210 346 5.28e-14 73.2
MS.gene029604.t1 AT4G34135 26.693 251 165 9 13 255 84 323 1.08e-13 72.0
MS.gene029604.t1 AT4G09500 32.283 127 78 2 222 340 227 353 5.64e-12 67.4

Find 0 sgRNAs with CRISPR-Local

Find 108 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTTTGATAGATGTTTT+TGG - 10972:40084-40103 MS.gene029604:CDS 15.0%
!! TAAAAGGATGTATTAAATCT+GGG + 10972:39486-39505 None:intergenic 20.0%
!! TTAAAAGGATGTATTAAATC+TGG + 10972:39487-39506 None:intergenic 20.0%
!! TTGTATATGATACATGAAAT+TGG + 10972:39274-39293 None:intergenic 20.0%
!!! TAAAATGTTTTGTGTATTAG+TGG - 10972:39558-39577 MS.gene029604:CDS 20.0%
!!! TCAAAAATTTTGCATTTGTA+AGG + 10972:40074-40093 None:intergenic 20.0%
! ATAATTGGATAGGGATTAAA+AGG + 10972:39502-39521 None:intergenic 25.0%
! ATATTCTTTCTGCTTTATCA+TGG - 10972:39335-39354 MS.gene029604:CDS 25.0%
! ATGATTGTAGTATTATAGAG+TGG - 10972:39722-39741 MS.gene029604:CDS 25.0%
! TTAATCCCTATCCAATTATA+GGG - 10972:39503-39522 MS.gene029604:CDS 25.0%
! TTGTATTGAAGGACTATAAA+AGG + 10972:39457-39476 None:intergenic 25.0%
! TTTAATCCCTATCCAATTAT+AGG - 10972:39502-39521 MS.gene029604:CDS 25.0%
!! AAAATTTTGCATTTGTAAGG+TGG + 10972:40071-40090 None:intergenic 25.0%
!! ATTCTAAACTCAGATTTTTG+TGG - 10972:39845-39864 MS.gene029604:CDS 25.0%
!! TTCTAAACTCAGATTTTTGT+GGG - 10972:39846-39865 MS.gene029604:CDS 25.0%
AAGTGAACGAAATTGCATTT+GGG - 10972:39815-39834 MS.gene029604:CDS 30.0%
GATCATTGTTTACTAGATGA+TGG - 10972:39166-39185 MS.gene029604:CDS 30.0%
GGCAAATGAACATCAATATA+AGG + 10972:39436-39455 None:intergenic 30.0%
TCGGAATCTTGATGTATTTA+TGG - 10972:40281-40300 MS.gene029604:CDS 30.0%
TGAAGAAAAATGCAATGAAG+TGG - 10972:40214-40233 MS.gene029604:CDS 30.0%
! ATACAATCCTTTTCTTCCAT+GGG - 10972:39288-39307 MS.gene029604:CDS 30.0%
! ATGTAAACTACAGAACCTTT+TGG + 10972:39760-39779 None:intergenic 30.0%
! CTGTAGTTTACATCTCTTTT+GGG - 10972:39767-39786 MS.gene029604:CDS 30.0%
! TAGATTGGGTTATAGTCTTA+TGG - 10972:40116-40135 MS.gene029604:CDS 30.0%
! TATACAATCCTTTTCTTCCA+TGG - 10972:39287-39306 MS.gene029604:CDS 30.0%
! TCTGTAGTTTACATCTCTTT+TGG - 10972:39766-39785 MS.gene029604:CDS 30.0%
!! ATATAAGGTTCTGTTTCTGA+AGG + 10972:39421-39440 None:intergenic 30.0%
!! TAGTCTTATGGAAAACAAGT+TGG - 10972:40128-40147 MS.gene029604:CDS 30.0%
!!! TCTAATGAGGACTGATTTTT+TGG + 10972:39626-39645 None:intergenic 30.0%
!!! TGATAGATGTTTTTGGTGTA+GGG - 10972:40091-40110 MS.gene029604:CDS 30.0%
!!! TTGATAGATGTTTTTGGTGT+AGG - 10972:40090-40109 MS.gene029604:CDS 30.0%
AAATGCAATGAAGTGGAAGA+AGG - 10972:40221-40240 MS.gene029604:CDS 35.0%
AACAAATTAGCAACTCCGAT+AGG - 10972:39115-39134 MS.gene029604:CDS 35.0%
AGTGACCCTATAATTGGATA+GGG + 10972:39511-39530 None:intergenic 35.0%
CAAGTGAACGAAATTGCATT+TGG - 10972:39814-39833 MS.gene029604:CDS 35.0%
CAAGTTATTCATATGTGACG+TGG + 10972:39536-39555 None:intergenic 35.0%
CTGGGATTTCATTGTATTGA+AGG + 10972:39468-39487 None:intergenic 35.0%
GTGGACATAGTTATAGTAAG+TGG + 10972:39383-39402 None:intergenic 35.0%
TGCTGTTGTAAACATTCACA+AGG - 10972:40320-40339 MS.gene029604:CDS 35.0%
! AAGGAAAAGGTACAAGTTTG+TGG + 10972:39402-39421 None:intergenic 35.0%
! AGCGTGATTCTTGATCATTT+TGG + 10972:39239-39258 None:intergenic 35.0%
! TATCGGAGTTGCTAATTTGT+TGG + 10972:39116-39135 None:intergenic 35.0%
! TTTGGTGTAGGGATTAGATT+GGG - 10972:40102-40121 MS.gene029604:CDS 35.0%
!! ATCATGCTCTAGTTCTTCAT+AGG + 10972:39587-39606 None:intergenic 35.0%
!! TTTTGGTGTAGGGATTAGAT+TGG - 10972:40101-40120 MS.gene029604:CDS 35.0%
!!! TGCTTGCTGCTTTTATTGTT+GGG + 10972:39672-39691 None:intergenic 35.0%
!!! TTGCTTGCTGCTTTTATTGT+TGG + 10972:39673-39692 None:intergenic 35.0%
AAAGCAGCAAGCAATATTCG+AGG - 10972:39679-39698 MS.gene029604:CDS 40.0%
AAAGCTACATCACAAACCCA+TGG + 10972:39307-39326 None:intergenic 40.0%
AACAAGTGAGAGAGGAAAAG+TGG - 10972:39912-39931 MS.gene029604:CDS 40.0%
ATTGTTGGGTTCTTGAACAG+AGG + 10972:39658-39677 None:intergenic 40.0%
CTTAATGGAAGCAACAACAG+GGG - 10972:40176-40195 MS.gene029604:CDS 40.0%
GAGTGACCCTATAATTGGAT+AGG + 10972:39512-39531 None:intergenic 40.0%
GATCAAAGAACTCGAAAGTG+AGG + 10972:39150-39169 None:intergenic 40.0%
GCAATTTCGTTCACTTGTTC+TGG + 10972:39811-39830 None:intergenic 40.0%
GCTTAATGGAAGCAACAACA+GGG - 10972:40175-40194 MS.gene029604:CDS 40.0%
TACATCAAGATTCCGATCAG+AGG + 10972:40277-40296 None:intergenic 40.0%
TCACAAACCCATGGAAGAAA+AGG + 10972:39298-39317 None:intergenic 40.0%
TGCTTAATGGAAGCAACAAC+AGG - 10972:40174-40193 MS.gene029604:CDS 40.0%
TGGCTAAACACAAAGCCAAA+AGG - 10972:39742-39761 MS.gene029604:CDS 40.0%
TTCTTGAACAGAGGACCAAT+GGG + 10972:39649-39668 None:intergenic 40.0%
TTTGTGGGCAAAAAAACACC+AGG - 10972:39861-39880 MS.gene029604:CDS 40.0%
!! CAAGTTGGTAACAAGAGATG+AGG - 10972:40143-40162 MS.gene029604:CDS 40.0%
!! GGAAGTACTTGATCATCCTT+CGG - 10972:39954-39973 MS.gene029604:CDS 40.0%
!! GGTTCTGTTTCTGAAGGAAA+AGG + 10972:39415-39434 None:intergenic 40.0%
!! TGAGGTGAAGAAGTGCTTAA+TGG - 10972:40161-40180 MS.gene029604:CDS 40.0%
AACAACAGGGGAAAAAGCAG+AGG - 10972:40188-40207 MS.gene029604:CDS 45.0%
AATGCTGGAAATGCCAACAC+CGG + 10972:40042-40061 None:intergenic 45.0%
ACCAGGATCATTTGCCTGAT+GGG - 10972:39878-39897 MS.gene029604:CDS 45.0%
AGAGAGGAAAAGTGGTGAAG+TGG - 10972:39920-39939 MS.gene029604:CDS 45.0%
AGTACTTGATCATCCTTCGG+TGG - 10972:39957-39976 MS.gene029604:CDS 45.0%
ATGCAGAGCTTGAGCTTGTA+GGG - 10972:39200-39219 MS.gene029604:CDS 45.0%
GCATGTTTCGTGACACATTG+TGG - 10972:39979-39998 MS.gene029604:CDS 45.0%
GTGGTGAGTGACCCTATAAT+TGG + 10972:39517-39536 None:intergenic 45.0%
GTTCTTGAACAGAGGACCAA+TGG + 10972:39650-39669 None:intergenic 45.0%
TCAGTCCTCATTAGACCCAT+TGG - 10972:39631-39650 MS.gene029604:CDS 45.0%
TGATCAAGTACTTCCTCCTG+TGG + 10972:39949-39968 None:intergenic 45.0%
TGCAATGAAGTGGAAGAAGG+CGG - 10972:40224-40243 MS.gene029604:CDS 45.0%
TTAGCAACTCCGATAGGTGA+TGG - 10972:39121-39140 MS.gene029604:CDS 45.0%
TTGGAGGAAACAAGTGAGAG+AGG - 10972:39904-39923 MS.gene029604:CDS 45.0%
TTGTGGCTGGAATTCAACGA+TGG - 10972:39996-40015 MS.gene029604:CDS 45.0%
! CGTTCACTTGTTCTGGATGA+TGG + 10972:39804-39823 None:intergenic 45.0%
! GTGTTGGCATTTCCAGCATT+TGG - 10972:40042-40061 MS.gene029604:CDS 45.0%
!! TCATTTGCCTGATGGGTTCT+TGG - 10972:39885-39904 MS.gene029604:CDS 45.0%
AATGAAGTGGAAGAAGGCGG+CGG - 10972:40227-40246 MS.gene029604:CDS 50.0%
ACCCATCAGGCAAATGATCC+TGG + 10972:39882-39901 None:intergenic 50.0%
ACGATGGAAGCAACTGCTTC+AGG - 10972:40012-40031 MS.gene029604:CDS 50.0%
AGCAACTGCTTCAGGAGTTC+CGG - 10972:40020-40039 MS.gene029604:CDS 50.0%
CACCAGGATCATTTGCCTGA+TGG - 10972:39877-39896 MS.gene029604:CDS 50.0%
CATGCAGAGCTTGAGCTTGT+AGG - 10972:39199-39218 MS.gene029604:CDS 50.0%
CTACAAGCTCAAGCTCTGCA+TGG + 10972:39201-39220 None:intergenic 50.0%
CTCAAGCTCTGCATGGTCAA+TGG + 10972:39194-39213 None:intergenic 50.0%
GAGGACCAATGGGTCTAATG+AGG + 10972:39639-39658 None:intergenic 50.0%
GTAAGGTGGTCACCAAATGC+TGG + 10972:40057-40076 None:intergenic 50.0%
GTGAGGCAACCATCACCTAT+CGG + 10972:39133-39152 None:intergenic 50.0%
GTTTCCTCCAAGAACCCATC+AGG + 10972:39895-39914 None:intergenic 50.0%
GTTTCGTGACACATTGTGGC+TGG - 10972:39983-40002 MS.gene029604:CDS 50.0%
!! TTTGCCTGATGGGTTCTTGG+AGG - 10972:39888-39907 MS.gene029604:CDS 50.0%
AGTGGTGAAGTGGAGTCCAC+AGG - 10972:39930-39949 MS.gene029604:CDS 55.0%
CAGAGCTTGAGCTTGTAGGG+AGG - 10972:39203-39222 MS.gene029604:CDS 55.0%
CTGTCGGTGGATCCTCTGAT+CGG - 10972:40262-40281 MS.gene029604:CDS 55.0%
GTCACGAAACATGCCACCGA+AGG + 10972:39973-39992 None:intergenic 55.0%
TGCTTCAGGAGTTCCGGTGT+TGG - 10972:40026-40045 MS.gene029604:CDS 55.0%
GGTGAAGTGGAGTCCACAGG+AGG - 10972:39933-39952 MS.gene029604:CDS 60.0%
GAAGTGGAAGAAGGCGGCGG+AGG - 10972:40230-40249 MS.gene029604:CDS 65.0%
GAGGAAGCAGTGGCTGTCGG+TGG - 10972:40249-40268 MS.gene029604:CDS 65.0%
GCGGAGGAAGCAGTGGCTGT+CGG - 10972:40246-40265 MS.gene029604:CDS 65.0%
GAAGGCGGCGGAGGAAGCAG+TGG - 10972:40239-40258 MS.gene029604:CDS 70.0%


Chromosome Type Strat End Strand Name
10972 gene 39103 40347 39103 ID=MS.gene029604
10972 mRNA 39103 40347 39103 ID=MS.gene029604.t1;Parent=MS.gene029604
10972 exon 39103 40347 39103 ID=MS.gene029604.t1.exon1;Parent=MS.gene029604.t1
10972 CDS 39103 40347 39103 ID=cds.MS.gene029604.t1;Parent=MS.gene029604.t1
Gene Sequence

>MS.gene029604

ATGCGAATCACCAACAAATTAGCAACTCCGATAGGTGATGGTTGCCTCACTTTCGAGTTCTTTGATCATTGTTTACTAGATGATGGTTCCATTGACCATGCAGAGCTTGAGCTTGTAGGGAGGCAGTTTTTTTCCAAAATGATCAAGAATCACGCTGATTCAAGTAAACCAATTTCATGTATCATATACAATCCTTTTCTTCCATGGGTTTGTGATGTAGCTTTTGAACATGATATTCTTTCTGCTTTATCATGGAATAATTCTAGTGCTGTTTTCGCCACTTACTATAACTATGTCCACAAACTTGTACCTTTTCCTTCAGAAACAGAACCTTATATTGATGTTCATTTGCCTTTTATAGTCCTTCAATACAATGAAATCCCAGATTTAATACATCCTTTTAATCCCTATCCAATTATAGGGTCACTCACCACGTCACATATGAATAACTTGTCTAAAATGTTTTGTGTATTAGTGGACACCTATGAAGAACTAGAGCATGATTTCATCGATTATCTTTCCAAAAAATCAGTCCTCATTAGACCCATTGGTCCTCTGTTCAAGAACCCAACAATAAAAGCAGCAAGCAATATTCGAGGTGATTTTGTTAAGAGCGATGATGATTGTAGTATTATAGAGTGGCTAAACACAAAGCCAAAAGGTTCTGTAGTTTACATCTCTTTTGGGACTGTTGTAGACCATCATCCAGAACAAGTGAACGAAATTGCATTTGGGTTATTGAATTCTAAACTCAGATTTTTGTGGGCAAAAAAACACCAGGATCATTTGCCTGATGGGTTCTTGGAGGAAACAAGTGAGAGAGGAAAAGTGGTGAAGTGGAGTCCACAGGAGGAAGTACTTGATCATCCTTCGGTGGCATGTTTCGTGACACATTGTGGCTGGAATTCAACGATGGAAGCAACTGCTTCAGGAGTTCCGGTGTTGGCATTTCCAGCATTTGGTGACCACCTTACAAATGCAAAATTTTTGATAGATGTTTTTGGTGTAGGGATTAGATTGGGTTATAGTCTTATGGAAAACAAGTTGGTAACAAGAGATGAGGTGAAGAAGTGCTTAATGGAAGCAACAACAGGGGAAAAAGCAGAGGAGTTGAAGAAAAATGCAATGAAGTGGAAGAAGGCGGCGGAGGAAGCAGTGGCTGTCGGTGGATCCTCTGATCGGAATCTTGATGTATTTATGGAAGACATTAAGAAACGTGCTGTTGTAAACATTCACAAGGTGTAA
Protein sequence

>MS.gene029604.t1

MRITNKLATPIGDGCLTFEFFDHCLLDDGSIDHAELELVGRQFFSKMIKNHADSSKPISCIIYNPFLPWVCDVAFEHDILSALSWNNSSAVFATYYNYVHKLVPFPSETEPYIDVHLPFIVLQYNEIPDLIHPFNPYPIIGSLTTSHMNNLSKMFCVLVDTYEELEHDFIDYLSKKSVLIRPIGPLFKNPTIKAASNIRGDFVKSDDDCSIIEWLNTKPKGSVVYISFGTVVDHHPEQVNEIAFGLLNSKLRFLWAKKHQDHLPDGFLEETSERGKVVKWSPQEEVLDHPSVACFVTHCGWNSTMEATASGVPVLAFPAFGDHLTNAKFLIDVFGVGIRLGYSLMENKLVTRDEVKKCLMEATTGEKAEELKKNAMKWKKAAEEAVAVGGSSDRNLDVFMEDIKKRAVVNIHKV