Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033130.t1 | XP_003609066.2 | 99.5 | 222 | 1 | 0 | 1 | 222 | 1 | 222 | 1.00E-122 | 449.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033130.t1 | Q8LC68 | 72.9 | 221 | 58 | 2 | 1 | 219 | 1 | 221 | 2.4e-88 | 326.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033130.t1 | G7JQZ6 | 99.5 | 222 | 1 | 0 | 1 | 222 | 1 | 222 | 7.4e-123 | 449.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene033130 | MS.gene21952 | PPI |
| MS.gene033130 | MS.gene22290 | PPI |
| MS.gene073732 | MS.gene033130 | PPI |
| MS.gene28923 | MS.gene033130 | PPI |
| MS.gene033130 | MS.gene024700 | PPI |
| MS.gene052308 | MS.gene033130 | PPI |
| MS.gene033130 | MS.gene58439 | PPI |
| MS.gene21678 | MS.gene033130 | PPI |
| MS.gene22290 | MS.gene033130 | PPI |
| MS.gene033130 | MS.gene040755 | PPI |
| MS.gene033130 | MS.gene031830 | PPI |
| MS.gene033130 | MS.gene93335 | PPI |
| MS.gene035484 | MS.gene033130 | PPI |
| MS.gene033130 | MS.gene003373 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033130.t1 | MTR_4g108570 | 99.213 | 254 | 1 | 1 | 1 | 253 | 1 | 254 | 0.0 | 497 |
| MS.gene033130.t1 | MTR_4g108570 | 94.737 | 266 | 1 | 2 | 1 | 253 | 1 | 266 | 6.07e-177 | 487 |
| MS.gene033130.t1 | MTR_3g040400 | 78.281 | 221 | 45 | 1 | 1 | 218 | 1 | 221 | 4.05e-127 | 361 |
| MS.gene033130.t1 | MTR_4g115160 | 63.559 | 236 | 71 | 3 | 5 | 230 | 105 | 335 | 4.29e-100 | 296 |
| MS.gene033130.t1 | MTR_4g115160 | 61.004 | 259 | 83 | 4 | 5 | 253 | 105 | 355 | 2.62e-97 | 289 |
| MS.gene033130.t1 | MTR_4g115820 | 60.204 | 98 | 25 | 3 | 100 | 183 | 6 | 103 | 3.62e-30 | 110 |
| MS.gene033130.t1 | MTR_0240s0030 | 48.810 | 84 | 42 | 1 | 57 | 139 | 2 | 85 | 4.97e-25 | 95.1 |
| MS.gene033130.t1 | MTR_6g090475 | 39.496 | 119 | 59 | 2 | 100 | 206 | 38 | 155 | 3.50e-20 | 84.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033130.t1 | AT1G18800 | 72.851 | 221 | 57 | 3 | 1 | 218 | 1 | 221 | 1.54e-112 | 324 |
| MS.gene033130.t1 | AT1G74560 | 73.529 | 204 | 52 | 2 | 17 | 218 | 22 | 225 | 2.10e-108 | 313 |
| MS.gene033130.t1 | AT1G74560 | 73.333 | 195 | 50 | 2 | 17 | 209 | 22 | 216 | 1.23e-102 | 299 |
Find 52 sgRNAs with CRISPR-Local
Find 291 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAATCTATTCCTGATTTC+TGG | 0.142000 | 8.2:+17397285 | MS.gene033130:CDS |
| TTCGGTGAGTTTCTGCTTCT+TGG | 0.176469 | 8.2:-17396963 | None:intergenic |
| AATTAATCAAGGATGATTTA+TGG | 0.308424 | 8.2:+17400404 | MS.gene033130:CDS |
| TCTTGAGGTTGAAGATAATA+AGG | 0.335371 | 8.2:+17397886 | MS.gene033130:CDS |
| GATAATAAGGATGTCAAATC+TGG | 0.344818 | 8.2:+17397899 | MS.gene033130:CDS |
| AGTTCAGCATCAACTTCTTC+GGG | 0.365326 | 8.2:-17396989 | None:intergenic |
| CTTCTCATGATTGTCGCCAT+TGG | 0.369583 | 8.2:-17398894 | None:intergenic |
| GAGTTCAGCATCAACTTCTT+CGG | 0.373422 | 8.2:-17396990 | None:intergenic |
| ATGAATGCAGTTTCCTTAGT+TGG | 0.378489 | 8.2:+17400165 | MS.gene033130:intron |
| TTCTCATGATTGTCGCCATT+GGG | 0.394389 | 8.2:-17398893 | None:intergenic |
| TGAATCCTCAAAATAGGGAT+TGG | 0.404769 | 8.2:-17398120 | None:intergenic |
| GAATCCTCAAAATAGGGATT+GGG | 0.412238 | 8.2:-17398119 | None:intergenic |
| GACACCAACCTGACATCAAC+AGG | 0.420723 | 8.2:-17398935 | None:intergenic |
| TCTCTGTTGTTCCTTCTTCA+CGG | 0.428176 | 8.2:-17398166 | None:intergenic |
| ACAGCATTCAACCAGAAATC+AGG | 0.453818 | 8.2:-17397296 | None:intergenic |
| TCATCGGCATCCTCTTCATC+AGG | 0.453926 | 8.2:-17400582 | None:intergenic |
| TCGTTCCGCTTATCGTAAAC+CGG | 0.454701 | 8.2:-17397257 | None:intergenic |
| ATGAGAAGAAAGGGAACAAA+AGG | 0.469606 | 8.2:+17398909 | MS.gene033130:CDS |
| CTGTGAGCAGAAAGATGATA+TGG | 0.473510 | 8.2:+17400196 | MS.gene033130:CDS |
| GGCGACAATCATGAGAAGAA+AGG | 0.484157 | 8.2:+17398899 | MS.gene033130:CDS |
| AAAGGCCTCCTGTTGATGTC+AGG | 0.487205 | 8.2:+17398927 | MS.gene033130:CDS |
| AGCAGAAGTATAATGAGATT+AGG | 0.487313 | 8.2:+17397231 | MS.gene033130:CDS |
| CACAGTCACAAAACCAACTA+AGG | 0.487948 | 8.2:-17400178 | None:intergenic |
| GCAGCTTGCAGAATTAATCA+AGG | 0.516175 | 8.2:+17400393 | MS.gene033130:intron |
| GTATAATGAGATTAGGAAGC+CGG | 0.518765 | 8.2:+17397238 | MS.gene033130:CDS |
| TGTTGTTCCTTCTTCACGGA+AGG | 0.521205 | 8.2:-17398162 | None:intergenic |
| GCGACAATCATGAGAAGAAA+GGG | 0.529007 | 8.2:+17398900 | MS.gene033130:CDS |
| TAATGATGAAGCGAGTGATA+AGG | 0.530659 | 8.2:+17397196 | MS.gene033130:CDS |
| GATCCAAGATGACCTCGAAA+AGG | 0.540267 | 8.2:+17397039 | MS.gene033130:CDS |
| CTCATTCAGTAGTTCACTGA+GGG | 0.542426 | 8.2:-17397452 | None:intergenic |
| TGACGAAGAGGGTGATGATG+AGG | 0.543527 | 8.2:+17401240 | MS.gene033130:CDS |
| CTCATCATCAGCTTCATCAT+CGG | 0.555556 | 8.2:-17400598 | None:intergenic |
| CAAGTATTTGAGTTCTCTTG+AGG | 0.559002 | 8.2:+17397871 | MS.gene033130:CDS |
| GATCTCTTGCAATTTCTCGA+TGG | 0.566477 | 8.2:-17397020 | None:intergenic |
| GTAGTTCACTGAGGGTAGGA+TGG | 0.569898 | 8.2:-17397444 | None:intergenic |
| CCTCAGTGAACTACTGAATG+AGG | 0.570986 | 8.2:+17397453 | MS.gene033130:CDS |
| ACAGGAGGAGCCTGATGAAG+AGG | 0.571562 | 8.2:+17400572 | MS.gene033130:intron |
| AGAGGCGAACCGAAGATGGT+TGG | 0.579592 | 8.2:+17396932 | None:intergenic |
| CATAAAATGGAAAGAAGGCA+AGG | 0.587844 | 8.2:+17398202 | MS.gene033130:CDS |
| CTTGCAATTTCTCGATGGAG+AGG | 0.599246 | 8.2:-17397015 | None:intergenic |
| AGACGAGGACGACTCTGAAG+AGG | 0.603159 | 8.2:+17401216 | MS.gene033130:CDS |
| GGAAGCCGGTTTACGATAAG+CGG | 0.605546 | 8.2:+17397252 | MS.gene033130:CDS |
| CTCTGAAGAGGATGACGAAG+AGG | 0.619244 | 8.2:+17401228 | MS.gene033130:CDS |
| TCTGAAGAGGATGACGAAGA+GGG | 0.630726 | 8.2:+17401229 | MS.gene033130:CDS |
| TTCAGTAGTTCACTGAGGGT+AGG | 0.637147 | 8.2:-17397448 | None:intergenic |
| GAAGAGGGTGATGATGAGGA+AGG | 0.646490 | 8.2:+17401244 | MS.gene033130:CDS |
| TACATGTAGGGAATACCCAA+TGG | 0.673035 | 8.2:+17398878 | MS.gene033130:intron |
| CGATGATGAAGCTGATGATG+AGG | 0.673202 | 8.2:+17400599 | MS.gene033130:CDS |
| ACACTGTTGAAATAAATGAG+TGG | 0.676235 | 8.2:-17400433 | None:intergenic |
| CCTCATTCAGTAGTTCACTG+AGG | 0.684849 | 8.2:-17397453 | None:intergenic |
| ACCAACCTGACATCAACAGG+AGG | 0.699036 | 8.2:-17398932 | None:intergenic |
| TATGGCTGACATTCACGACG+AGG | 0.776284 | 8.2:+17400214 | MS.gene033130:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATGTTAATATAAAGAATA+TGG | + | chr8.2:17400893-17400912 | MS.gene033130:intron | 10.0% |
| !! | ATTAAATATATGATAGTTTA+AGG | + | chr8.2:17398677-17398696 | MS.gene033130:intron | 10.0% |
| !! | TCAATTGAATAATAAAAAAA+CGG | - | chr8.2:17397067-17397086 | None:intergenic | 10.0% |
| !! | TTAAATATATGATAGTTTAA+GGG | + | chr8.2:17398678-17398697 | MS.gene033130:intron | 10.0% |
| !! | AAAAATTATAAATGCTGATA+GGG | - | chr8.2:17398254-17398273 | None:intergenic | 15.0% |
| !! | ATATCTATCAAATAAAGAAT+TGG | - | chr8.2:17397850-17397869 | None:intergenic | 15.0% |
| !! | TAAAAATTATAAATGCTGAT+AGG | - | chr8.2:17398255-17398274 | None:intergenic | 15.0% |
| !! | TCAACAACAAAAAATATATA+AGG | - | chr8.2:17398754-17398773 | None:intergenic | 15.0% |
| !! | TGTTTGTCATTAATTTAAAA+TGG | - | chr8.2:17401147-17401166 | None:intergenic | 15.0% |
| !!! | AAAATGTTTTTTTACATGAA+AGG | - | chr8.2:17399927-17399946 | None:intergenic | 15.0% |
| !!! | AAATGTTTTTTTACATGAAA+GGG | - | chr8.2:17399926-17399945 | None:intergenic | 15.0% |
| !!! | ATTGTGTTTTATTAATTATG+TGG | + | chr8.2:17397146-17397165 | MS.gene033130:intron | 15.0% |
| !!! | TTCACATTATTTATTGTTTT+CGG | - | chr8.2:17400998-17401017 | None:intergenic | 15.0% |
| !! | AAAATGACAAATAATGCATT+TGG | - | chr8.2:17400499-17400518 | None:intergenic | 20.0% |
| !! | AAAATTATAAATGCTGATAG+GGG | - | chr8.2:17398253-17398272 | None:intergenic | 20.0% |
| !! | AACACAATTCAAATCAAATT+AGG | - | chr8.2:17397134-17397153 | None:intergenic | 20.0% |
| !! | AATTAATCAAGGATGATTTA+TGG | + | chr8.2:17400404-17400423 | MS.gene033130:CDS | 20.0% |
| !! | AGTGAATTGAATATTATACA+AGG | - | chr8.2:17400368-17400387 | None:intergenic | 20.0% |
| !! | ATTTGCAAATGAAAATACTT+TGG | - | chr8.2:17399549-17399568 | None:intergenic | 20.0% |
| !! | TATTGCTCATAATAATTGTT+TGG | + | chr8.2:17400680-17400699 | MS.gene033130:intron | 20.0% |
| !! | TGAAAATTATGAATTCAGTA+TGG | - | chr8.2:17400725-17400744 | None:intergenic | 20.0% |
| !! | TGATTAGAAATACAATCATT+AGG | + | chr8.2:17398607-17398626 | MS.gene033130:intron | 20.0% |
| !! | TTAATCCTAAACATTGTTAA+AGG | + | chr8.2:17401088-17401107 | MS.gene033130:intron | 20.0% |
| !!! | AATCCTTTTAAAGTAGATTT+AGG | - | chr8.2:17399329-17399348 | None:intergenic | 20.0% |
| !!! | ATAAATCATAAGTTTCAAGT+AGG | + | chr8.2:17398422-17398441 | MS.gene033130:intron | 20.0% |
| !!! | CATTTTGTATAGACATATAA+AGG | - | chr8.2:17399057-17399076 | None:intergenic | 20.0% |
| !!! | TAAATCATAAGTTTCAAGTA+GGG | + | chr8.2:17398423-17398442 | MS.gene033130:intron | 20.0% |
| !!! | TCTATTTTTTCCAAGAAAAA+CGG | - | chr8.2:17400636-17400655 | None:intergenic | 20.0% |
| !!! | TGAAGTGATTTTCAAATTTT+CGG | - | chr8.2:17397971-17397990 | None:intergenic | 20.0% |
| ! | AAAAAAGGAAAAGAGGAATT+TGG | - | chr8.2:17399205-17399224 | None:intergenic | 25.0% |
| ! | AAATAATATTTCTTGTTCGC+AGG | + | chr8.2:17401189-17401208 | MS.gene033130:intron | 25.0% |
| ! | AAGAATATGGAACTATAAGT+TGG | + | chr8.2:17400906-17400925 | MS.gene033130:intron | 25.0% |
| ! | AATCTGTAAATCTCACAATT+TGG | - | chr8.2:17398714-17398733 | None:intergenic | 25.0% |
| ! | ACAATTGATCAAATTTCTCT+TGG | - | chr8.2:17399664-17399683 | None:intergenic | 25.0% |
| ! | ACTGAAAAGAAGAAGAAAAA+AGG | - | chr8.2:17399220-17399239 | None:intergenic | 25.0% |
| ! | ACTTTGGTATTGTTAAATAG+CGG | - | chr8.2:17399533-17399552 | None:intergenic | 25.0% |
| ! | ATGCCTAAATCTACTTTAAA+AGG | + | chr8.2:17399323-17399342 | MS.gene033130:intron | 25.0% |
| ! | ATTATTTGATCCACCAAATT+AGG | + | chr8.2:17397104-17397123 | MS.gene033130:intron | 25.0% |
| ! | CAAATTAGGTTAACCTAATT+TGG | - | chr8.2:17397137-17397118 | None:intergenic | 25.0% |
| ! | CTGTCGAAAAAAAAAAAAGA+AGG | - | chr8.2:17398814-17398833 | None:intergenic | 25.0% |
| ! | CTTCATTGCAATGAAAAATA+TGG | + | chr8.2:17397986-17398005 | MS.gene033130:intron | 25.0% |
| ! | GTTAGTAAAATACAACAACA+AGG | - | chr8.2:17398846-17398865 | None:intergenic | 25.0% |
| ! | TAGATCCTTTAACAATGTTT+AGG | - | chr8.2:17401096-17401115 | None:intergenic | 25.0% |
| ! | TCAATTAGGACATCAATAAA+GGG | + | chr8.2:17399145-17399164 | MS.gene033130:intron | 25.0% |
| ! | TCATTCTAACTTAAAGCTTT+AGG | - | chr8.2:17400965-17400984 | None:intergenic | 25.0% |
| ! | TGATCAATTGTATACTTGAT+TGG | + | chr8.2:17399673-17399692 | MS.gene033130:intron | 25.0% |
| ! | TTCAATTAAAGAGTTTGATG+CGG | + | chr8.2:17400741-17400760 | MS.gene033130:intron | 25.0% |
| ! | TTCATTTGCAAATAATTGAC+TGG | + | chr8.2:17399556-17399575 | MS.gene033130:intron | 25.0% |
| ! | TTGTGAGATTTACAGATTAA+TGG | + | chr8.2:17398716-17398735 | MS.gene033130:intron | 25.0% |
| ! | TTTATTGATGTCCTAATTGA+CGG | - | chr8.2:17399145-17399164 | None:intergenic | 25.0% |
| ! | TTTGAGAAATATGTTGTCAA+AGG | + | chr8.2:17400077-17400096 | MS.gene033130:intron | 25.0% |
| !! | AGGTGATTAACAAAAGTTTT+TGG | + | chr8.2:17400655-17400674 | MS.gene033130:intron | 25.0% |
| !! | ATTTTCAAATTTTCGGAAGA+GGG | - | chr8.2:17397964-17397983 | None:intergenic | 25.0% |
| !! | GGTGATTAACAAAAGTTTTT+GGG | + | chr8.2:17400656-17400675 | MS.gene033130:intron | 25.0% |
| !! | GTTTTTCTTGGAAAAAATAG+AGG | + | chr8.2:17400635-17400654 | MS.gene033130:intron | 25.0% |
| !!! | AAGTTTTGAATCCTCAAAAT+AGG | - | chr8.2:17398129-17398148 | None:intergenic | 25.0% |
| !!! | AGTTTTGAATCCTCAAAATA+GGG | - | chr8.2:17398128-17398147 | None:intergenic | 25.0% |
| !!! | TCTTTTTTTTTTTTCGACAG+AGG | + | chr8.2:17398814-17398833 | MS.gene033130:intron | 25.0% |
| !!! | TTAAACTTGCTAAAAGTAGA+GGG | + | chr8.2:17398337-17398356 | MS.gene033130:intron | 25.0% |
| !!! | TTCTGTGGAAGTATTTTTTA+AGG | + | chr8.2:17397590-17397609 | MS.gene033130:intron | 25.0% |
| !!! | TTTTTTACATGAAAGGGTTT+TGG | - | chr8.2:17399920-17399939 | None:intergenic | 25.0% |
| AAAAAGTTATGCATTCAGCA+TGG | - | chr8.2:17400787-17400806 | None:intergenic | 30.0% | |
| AAAACAAGCATCACTAATCA+AGG | - | chr8.2:17399172-17399191 | None:intergenic | 30.0% | |
| AAACAAGCATCACTAATCAA+GGG | - | chr8.2:17399171-17399190 | None:intergenic | 30.0% | |
| AAAGTTACCCCACAATTAAA+AGG | + | chr8.2:17398506-17398525 | MS.gene033130:intron | 30.0% | |
| ACACTGTTGAAATAAATGAG+TGG | - | chr8.2:17400436-17400455 | None:intergenic | 30.0% | |
| ACAGATTCATACAACATTAC+AGG | - | chr8.2:17398532-17398551 | None:intergenic | 30.0% | |
| ACATAATCCTGATACATGTA+GGG | + | chr8.2:17398866-17398885 | MS.gene033130:intron | 30.0% | |
| ACTAATATGCATCATGAACA+TGG | - | chr8.2:17399014-17399033 | None:intergenic | 30.0% | |
| AGCTACAGTTAGAAACATAA+CGG | - | chr8.2:17400540-17400559 | None:intergenic | 30.0% | |
| ATTAATGACAAACACAGCTT+TGG | + | chr8.2:17401153-17401172 | MS.gene033130:intron | 30.0% | |
| ATTAGGTTAACCTAATTTGG+TGG | - | chr8.2:17397117-17397136 | None:intergenic | 30.0% | |
| CATAACACAATACAATACAG+AGG | + | chr8.2:17399300-17399319 | MS.gene033130:intron | 30.0% | |
| CGCGAATGAAAATTAAAGTT+CGG | - | chr8.2:17400854-17400873 | None:intergenic | 30.0% | |
| GAAGAAGAAAAAAGGAAAAG+AGG | - | chr8.2:17399212-17399231 | None:intergenic | 30.0% | |
| GATAATAAGGATGTCAAATC+TGG | + | chr8.2:17397899-17397918 | MS.gene033130:CDS | 30.0% | |
| GATTTGAAGAAGTTTCACAT+TGG | - | chr8.2:17398299-17398318 | None:intergenic | 30.0% | |
| GTAGCTGATTGTAATATAAC+AGG | + | chr8.2:17400554-17400573 | MS.gene033130:intron | 30.0% | |
| GTCAATTAGGACATCAATAA+AGG | + | chr8.2:17399144-17399163 | MS.gene033130:intron | 30.0% | |
| GTCAGTAGAAAATCAACATT+TGG | - | chr8.2:17398059-17398078 | None:intergenic | 30.0% | |
| GTCTATACAAAATGAACTTC+TGG | + | chr8.2:17399063-17399082 | MS.gene033130:intron | 30.0% | |
| GTGATATTACTTTGATTCCA+TGG | - | chr8.2:17397675-17397694 | None:intergenic | 30.0% | |
| TAAAACCACCTTCATATTTG+AGG | + | chr8.2:17400015-17400034 | MS.gene033130:intron | 30.0% | |
| TACTTTGATTCCATGGAAAA+TGG | - | chr8.2:17397668-17397687 | None:intergenic | 30.0% | |
| TATCTCCGTCAATTATTTGA+CGG | + | chr8.2:17399600-17399619 | MS.gene033130:intron | 30.0% | |
| TCAAATCTATTCCTGATTTC+TGG | + | chr8.2:17397285-17397304 | MS.gene033130:CDS | 30.0% | |
| TCAATTGTATACTTGATTGG+AGG | + | chr8.2:17399676-17399695 | MS.gene033130:intron | 30.0% | |
| TCATTAGCACAAGAAATCAA+AGG | - | chr8.2:17400149-17400168 | None:intergenic | 30.0% | |
| TCTGAACATGAAATGATTAC+TGG | - | chr8.2:17398091-17398110 | None:intergenic | 30.0% | |
| TCTTGAGGTTGAAGATAATA+AGG | + | chr8.2:17397886-17397905 | MS.gene033130:CDS | 30.0% | |
| TGAAAATTAAAGTTCGGTTC+AGG | - | chr8.2:17400848-17400867 | None:intergenic | 30.0% | |
| TGAGTGATACTTTACTATTG+CGG | - | chr8.2:17398475-17398494 | None:intergenic | 30.0% | |
| TGATAACCTCCAAAAAAACT+TGG | + | chr8.2:17401041-17401060 | MS.gene033130:intron | 30.0% | |
| TTCTTCAAATCTACATGACA+TGG | + | chr8.2:17398308-17398327 | MS.gene033130:intron | 30.0% | |
| TTGTATGAATCTGTTCACTT+GGG | + | chr8.2:17398538-17398557 | MS.gene033130:intron | 30.0% | |
| TTTATTCCAATATGACCAAG+CGG | + | chr8.2:17399244-17399263 | MS.gene033130:intron | 30.0% | |
| ! | AAAACGAAACAGAATGGTTT+TGG | + | chr8.2:17397637-17397656 | MS.gene033130:intron | 30.0% |
| ! | AGCAGAAGTATAATGAGATT+AGG | + | chr8.2:17397231-17397250 | MS.gene033130:CDS | 30.0% |
| ! | GATTTTCAAATTTTCGGAAG+AGG | - | chr8.2:17397965-17397984 | None:intergenic | 30.0% |
| ! | GTATGATTCTGGAAATTACT+CGG | + | chr8.2:17397563-17397582 | MS.gene033130:intron | 30.0% |
| ! | TATTAGTTTCCACTTGTTCT+TGG | + | chr8.2:17399027-17399046 | MS.gene033130:intron | 30.0% |
| ! | TTAATTTTCATTCGCGATCT+AGG | + | chr8.2:17400858-17400877 | MS.gene033130:intron | 30.0% |
| ! | TTGATTAGTGATGCTTGTTT+TGG | + | chr8.2:17399171-17399190 | MS.gene033130:intron | 30.0% |
| ! | TTGCCTTCTTTCCATTTTAT+GGG | - | chr8.2:17398203-17398222 | None:intergenic | 30.0% |
| ! | TTTTCAAATTTTCGGAAGAG+GGG | - | chr8.2:17397963-17397982 | None:intergenic | 30.0% |
| !! | ATTACAGGCCTTTTAATTGT+GGG | - | chr8.2:17398517-17398536 | None:intergenic | 30.0% |
| !! | CAAATATGAAGGTGGTTTTA+AGG | - | chr8.2:17400015-17400034 | None:intergenic | 30.0% |
| !! | CTTAAACTTGCTAAAAGTAG+AGG | + | chr8.2:17398336-17398355 | MS.gene033130:intron | 30.0% |
| !! | TTGGTTTGTTTGTATGATTC+TGG | + | chr8.2:17397552-17397571 | MS.gene033130:intron | 30.0% |
| !!! | GATAACTTGCCAAGTTTTTT+TGG | - | chr8.2:17401053-17401072 | None:intergenic | 30.0% |
| !!! | GGTTTTGTTCCTTTGATTAA+CGG | + | chr8.2:17397798-17397817 | MS.gene033130:intron | 30.0% |
| !!! | TGGTACCAATTTTTTCCAAT+AGG | + | chr8.2:17399734-17399753 | MS.gene033130:intron | 30.0% |
| AAACCTAGCAATTGTTCAGA+AGG | - | chr8.2:17397783-17397802 | None:intergenic | 35.0% | |
| AAGACCTCTACAAGAACAAA+TGG | + | chr8.2:17398640-17398659 | MS.gene033130:intron | 35.0% | |
| ACAAACCAAACGTAACAACA+TGG | - | chr8.2:17397541-17397560 | None:intergenic | 35.0% | |
| AGAAACTACTTGAGAAGAAC+AGG | - | chr8.2:17400253-17400272 | None:intergenic | 35.0% | |
| AGACCTCTACAAGAACAAAT+GGG | + | chr8.2:17398641-17398660 | MS.gene033130:intron | 35.0% | |
| AGGGACCTATTGGAAAAAAT+TGG | - | chr8.2:17399742-17399761 | None:intergenic | 35.0% | |
| ATCCGTAATCATCAAACTGT+GGG | - | chr8.2:17399360-17399379 | None:intergenic | 35.0% | |
| ATGAATGCAGTTTCCTTAGT+TGG | + | chr8.2:17400165-17400184 | MS.gene033130:intron | 35.0% | |
| ATGAGAAGAAAGGGAACAAA+AGG | + | chr8.2:17398909-17398928 | MS.gene033130:CDS | 35.0% | |
| CACATAATCCTGATACATGT+AGG | + | chr8.2:17398865-17398884 | MS.gene033130:intron | 35.0% | |
| CATAAAATGGAAAGAAGGCA+AGG | + | chr8.2:17398202-17398221 | MS.gene033130:CDS | 35.0% | |
| CTTTGATTAACGGTTCTGTT+GGG | + | chr8.2:17397808-17397827 | MS.gene033130:intron | 35.0% | |
| GAAACGCTTCATTGAACAAA+TGG | + | chr8.2:17400116-17400135 | MS.gene033130:intron | 35.0% | |
| GAATCCTCAAAATAGGGATT+GGG | - | chr8.2:17398122-17398141 | None:intergenic | 35.0% | |
| GATAGTTTAAGGGAAACTGT+TGG | + | chr8.2:17398688-17398707 | MS.gene033130:intron | 35.0% | |
| GCGAAAGAATCATATTGTAG+CGG | + | chr8.2:17399467-17399486 | MS.gene033130:intron | 35.0% | |
| GCTGATTGTAATATAACAGG+AGG | + | chr8.2:17400557-17400576 | MS.gene033130:intron | 35.0% | |
| GTATAATGAGATTAGGAAGC+CGG | + | chr8.2:17397238-17397257 | MS.gene033130:CDS | 35.0% | |
| GTATACTTGATTGGAGGTTT+GGG | + | chr8.2:17399682-17399701 | MS.gene033130:intron | 35.0% | |
| GTTGTATGAATCTGTTCACT+TGG | + | chr8.2:17398537-17398556 | MS.gene033130:intron | 35.0% | |
| TAATGATGAAGCGAGTGATA+AGG | + | chr8.2:17397196-17397215 | MS.gene033130:CDS | 35.0% | |
| TATCCGTAATCATCAAACTG+TGG | - | chr8.2:17399361-17399380 | None:intergenic | 35.0% | |
| TCCATAGCAACGATAGTAAT+GGG | - | chr8.2:17399422-17399441 | None:intergenic | 35.0% | |
| TGAATCCTCAAAATAGGGAT+TGG | - | chr8.2:17398123-17398142 | None:intergenic | 35.0% | |
| TGACGGAGATAATTCTTCAA+AGG | - | chr8.2:17399591-17399610 | None:intergenic | 35.0% | |
| TGTATACTTGATTGGAGGTT+TGG | + | chr8.2:17399681-17399700 | MS.gene033130:intron | 35.0% | |
| TGTATGAATCTGTTCACTTG+GGG | + | chr8.2:17398539-17398558 | MS.gene033130:intron | 35.0% | |
| TTATAATCCTGCCGTCAATT+AGG | + | chr8.2:17399131-17399150 | MS.gene033130:intron | 35.0% | |
| TTCCATAGCAACGATAGTAA+TGG | - | chr8.2:17399423-17399442 | None:intergenic | 35.0% | |
| TTGTTGAGTGATCCATATAG+TGG | + | chr8.2:17398767-17398786 | MS.gene033130:intron | 35.0% | |
| ! | AAAAAAACGGTACCTTTTCG+AGG | - | chr8.2:17397054-17397073 | None:intergenic | 35.0% |
| ! | AAAGTATCACTCAAGTTTGC+AGG | + | chr8.2:17398482-17398501 | MS.gene033130:intron | 35.0% |
| ! | ATCAACTTCTTCGGGATTTT+CGG | - | chr8.2:17396984-17397003 | None:intergenic | 35.0% |
| ! | ATCCCACAGTTTGATGATTA+CGG | + | chr8.2:17399355-17399374 | MS.gene033130:intron | 35.0% |
| ! | CAAGTATTTGAGTTCTCTTG+AGG | + | chr8.2:17397871-17397890 | MS.gene033130:CDS | 35.0% |
| ! | CTTGCCTTCTTTCCATTTTA+TGG | - | chr8.2:17398204-17398223 | None:intergenic | 35.0% |
| ! | GTTTTCCATGTTGTTACGTT+TGG | + | chr8.2:17397533-17397552 | MS.gene033130:intron | 35.0% |
| ! | TAGTAATGGGAAAGTTGTTC+AGG | - | chr8.2:17399409-17399428 | None:intergenic | 35.0% |
| ! | TGCCTTCTTTCCATTTTATG+GGG | - | chr8.2:17398202-17398221 | None:intergenic | 35.0% |
| ! | TTCAATGAAGCGTTTCCAAA+AGG | - | chr8.2:17400112-17400131 | None:intergenic | 35.0% |
| ! | TTTCAAATTTTCGGAAGAGG+GGG | - | chr8.2:17397962-17397981 | None:intergenic | 35.0% |
| ! | TTTGTTATCATGGACAAAGC+TGG | - | chr8.2:17399103-17399122 | None:intergenic | 35.0% |
| !! | AACTCGTGAGTTTGTTATCA+TGG | - | chr8.2:17399113-17399132 | None:intergenic | 35.0% |
| !! | AATGGAAGTTCCGTTTTTCT+TGG | + | chr8.2:17400623-17400642 | MS.gene033130:intron | 35.0% |
| !! | CATTACAGGCCTTTTAATTG+TGG | - | chr8.2:17398518-17398537 | None:intergenic | 35.0% |
| !! | GTGAAAAGTATTGACCTTTC+AGG | + | chr8.2:17399846-17399865 | MS.gene033130:intron | 35.0% |
| !! | TTACAGGCCTTTTAATTGTG+GGG | - | chr8.2:17398516-17398535 | None:intergenic | 35.0% |
| !! | TTTGGTTTCACCATTTTCCA+TGG | + | chr8.2:17397655-17397674 | MS.gene033130:intron | 35.0% |
| !!! | AACTTGCCAAGTTTTTTTGG+AGG | - | chr8.2:17401050-17401069 | None:intergenic | 35.0% |
| AATGGAAAGAAGGCAAGGTA+AGG | + | chr8.2:17398207-17398226 | MS.gene033130:intron | 40.0% | |
| ACACGTGGAAAACAAAGACA+GGG | - | chr8.2:17400288-17400307 | None:intergenic | 40.0% | |
| ACAGCATTCAACCAGAAATC+AGG | - | chr8.2:17397299-17397318 | None:intergenic | 40.0% | |
| ACCCCCATAAAATGGAAAGA+AGG | + | chr8.2:17398197-17398216 | MS.gene033130:CDS | 40.0% | |
| AGAAGAAGGGCAACTTACAA+GGG | - | chr8.2:17397936-17397955 | None:intergenic | 40.0% | |
| AGAGACTGCTCTTGACAATA+TGG | - | chr8.2:17399800-17399819 | None:intergenic | 40.0% | |
| AGCAAGACAGAGAGTAAAGT+AGG | + | chr8.2:17399968-17399987 | MS.gene033130:intron | 40.0% | |
| AGCGGAAGGTAAGGAAATAT+TGG | + | chr8.2:17399262-17399281 | MS.gene033130:intron | 40.0% | |
| AGTTCAGCATCAACTTCTTC+GGG | - | chr8.2:17396992-17397011 | None:intergenic | 40.0% | |
| ATATTTCCTTACCTTCCGCT+TGG | - | chr8.2:17399262-17399281 | None:intergenic | 40.0% | |
| ATGGAAAGAAGGCAAGGTAA+GGG | + | chr8.2:17398208-17398227 | MS.gene033130:intron | 40.0% | |
| ATTAGTCAAGTAGAGACACG+TGG | - | chr8.2:17400303-17400322 | None:intergenic | 40.0% | |
| CACAGTCACAAAACCAACTA+AGG | - | chr8.2:17400181-17400200 | None:intergenic | 40.0% | |
| CCAACAGAACCGTTAATCAA+AGG | - | chr8.2:17397810-17397829 | None:intergenic | 40.0% | |
| CCTTTGATTAACGGTTCTGT+TGG | + | chr8.2:17397807-17397826 | MS.gene033130:intron | 40.0% | |
| CGAACTTGATGAGATGCATA+GGG | + | chr8.2:17398375-17398394 | MS.gene033130:intron | 40.0% | |
| CTCATCATCAGCTTCATCAT+CGG | - | chr8.2:17400601-17400620 | None:intergenic | 40.0% | |
| CTCATTCAGTAGTTCACTGA+GGG | - | chr8.2:17397455-17397474 | None:intergenic | 40.0% | |
| CTGTGAGCAGAAAGATGATA+TGG | + | chr8.2:17400196-17400215 | MS.gene033130:CDS | 40.0% | |
| GACCTCTACAAGAACAAATG+GGG | + | chr8.2:17398642-17398661 | MS.gene033130:intron | 40.0% | |
| GAGACTGCTCTTGACAATAT+GGG | - | chr8.2:17399799-17399818 | None:intergenic | 40.0% | |
| GAGATGCATAGGGAAAATAG+TGG | + | chr8.2:17398385-17398404 | MS.gene033130:intron | 40.0% | |
| GAGTTCAGCATCAACTTCTT+CGG | - | chr8.2:17396993-17397012 | None:intergenic | 40.0% | |
| GATCTCTTGCAATTTCTCGA+TGG | - | chr8.2:17397023-17397042 | None:intergenic | 40.0% | |
| GCAGCTTGCAGAATTAATCA+AGG | + | chr8.2:17400393-17400412 | MS.gene033130:intron | 40.0% | |
| GCCATCCGTCAAATAATTGA+CGG | - | chr8.2:17399608-17399627 | None:intergenic | 40.0% | |
| GCGACAATCATGAGAAGAAA+GGG | + | chr8.2:17398900-17398919 | MS.gene033130:CDS | 40.0% | |
| GCGGAAGGTAAGGAAATATT+GGG | + | chr8.2:17399263-17399282 | MS.gene033130:intron | 40.0% | |
| GCTTCTGTCCTCAAATATGA+AGG | - | chr8.2:17400026-17400045 | None:intergenic | 40.0% | |
| GTATGAATCTGTTCACTTGG+GGG | + | chr8.2:17398540-17398559 | MS.gene033130:intron | 40.0% | |
| GTGGACAAAACGAAACAGAA+TGG | + | chr8.2:17397631-17397650 | MS.gene033130:intron | 40.0% | |
| TACATGTAGGGAATACCCAA+TGG | + | chr8.2:17398878-17398897 | MS.gene033130:intron | 40.0% | |
| TCCCATTACTATCGTTGCTA+TGG | + | chr8.2:17399418-17399437 | MS.gene033130:intron | 40.0% | |
| TCCGTCAATTATTTGACGGA+TGG | + | chr8.2:17399604-17399623 | MS.gene033130:intron | 40.0% | |
| TCGAACTTGATGAGATGCAT+AGG | + | chr8.2:17398374-17398393 | MS.gene033130:intron | 40.0% | |
| TCTACAAGAACAAATGGGGA+GGG | + | chr8.2:17398646-17398665 | MS.gene033130:intron | 40.0% | |
| TCTCTGTTGTTCCTTCTTCA+CGG | - | chr8.2:17398169-17398188 | None:intergenic | 40.0% | |
| TCTGTCCTCAAATATGAAGG+TGG | - | chr8.2:17400023-17400042 | None:intergenic | 40.0% | |
| TGAATCCACCCGTCAAATAT+GGG | - | chr8.2:17399631-17399650 | None:intergenic | 40.0% | |
| TTCTCATGATTGTCGCCATT+GGG | - | chr8.2:17398896-17398915 | None:intergenic | 40.0% | |
| TTGAATCCACCCGTCAAATA+TGG | - | chr8.2:17399632-17399651 | None:intergenic | 40.0% | |
| TTTCGCTATCAGTGCAATAG+CGG | - | chr8.2:17399453-17399472 | None:intergenic | 40.0% | |
| ! | AAGGTCTTTTACCATGAGCT+TGG | - | chr8.2:17398795-17398814 | None:intergenic | 40.0% |
| ! | ACTTTTACCTTCCGTGAAGA+AGG | + | chr8.2:17398155-17398174 | MS.gene033130:CDS | 40.0% |
| ! | AGGTCTTTTACCATGAGCTT+GGG | - | chr8.2:17398794-17398813 | None:intergenic | 40.0% |
| ! | CAAAGGCTTAAAGCTCCTTT+TGG | + | chr8.2:17400094-17400113 | MS.gene033130:intron | 40.0% |
| ! | CAATCCCAATCCCTATTTTG+AGG | + | chr8.2:17398115-17398134 | MS.gene033130:CDS | 40.0% |
| ! | GCAAAGCACACAAGTTTTAC+TGG | - | chr8.2:17399766-17399785 | None:intergenic | 40.0% |
| ! | GCCTTCTTTCCATTTTATGG+GGG | - | chr8.2:17398201-17398220 | None:intergenic | 40.0% |
| ! | TATTTGACGGGTGGATTCAA+TGG | + | chr8.2:17399632-17399651 | MS.gene033130:intron | 40.0% |
| ! | TGAAGCTGATGATGAGGTAA+TGG | + | chr8.2:17400605-17400624 | MS.gene033130:intron | 40.0% |
| !! | ATGGTGGATGTTTAAGAGTC+TGG | + | chr8.2:17399714-17399733 | MS.gene033130:intron | 40.0% |
| !! | GAAAGTTGTTCAGGTTGTTG+AGG | - | chr8.2:17399400-17399419 | None:intergenic | 40.0% |
| !! | TGGAAGAGTATCTTTATGCC+TGG | + | chr8.2:17399875-17399894 | MS.gene033130:intron | 40.0% |
| AAAGGTCAGCCAAGAACAAG+TGG | - | chr8.2:17399039-17399058 | None:intergenic | 45.0% | |
| AAATTACTCGGCGTGTTCTG+TGG | + | chr8.2:17397575-17397594 | MS.gene033130:intron | 45.0% | |
| ATATGACCAAGCGGAAGGTA+AGG | + | chr8.2:17399253-17399272 | MS.gene033130:intron | 45.0% | |
| ATGAGCTTGGGTCCACTATA+TGG | - | chr8.2:17398782-17398801 | None:intergenic | 45.0% | |
| ATTGACCTTTCAGGAGTCGA+TGG | + | chr8.2:17399855-17399874 | MS.gene033130:intron | 45.0% | |
| CCTCAGTGAACTACTGAATG+AGG | + | chr8.2:17397453-17397472 | MS.gene033130:CDS | 45.0% | |
| CCTCATTCAGTAGTTCACTG+AGG | - | chr8.2:17397456-17397475 | None:intergenic | 45.0% | |
| CTAGCAATTGTTCAGAAGGC+AGG | - | chr8.2:17397779-17397798 | None:intergenic | 45.0% | |
| CTCCCCATTTGTTCTTGTAG+AGG | - | chr8.2:17398647-17398666 | None:intergenic | 45.0% | |
| CTCTACAAGAACAAATGGGG+AGG | + | chr8.2:17398645-17398664 | MS.gene033130:intron | 45.0% | |
| CTGCCTTCTGAACAATTGCT+AGG | + | chr8.2:17397777-17397796 | MS.gene033130:intron | 45.0% | |
| CTTCTAGCAGCGATTTCTGA+AGG | + | chr8.2:17400821-17400840 | MS.gene033130:intron | 45.0% | |
| CTTCTCATGATTGTCGCCAT+TGG | - | chr8.2:17398897-17398916 | None:intergenic | 45.0% | |
| CTTGCAATTTCTCGATGGAG+AGG | - | chr8.2:17397018-17397037 | None:intergenic | 45.0% | |
| GAATCCACCCGTCAAATATG+GGG | - | chr8.2:17399630-17399649 | None:intergenic | 45.0% | |
| GACACGTGGAAAACAAAGAC+AGG | - | chr8.2:17400289-17400308 | None:intergenic | 45.0% | |
| GAGAAGAAGGGCAACTTACA+AGG | - | chr8.2:17397937-17397956 | None:intergenic | 45.0% | |
| GATCCAAGATGACCTCGAAA+AGG | + | chr8.2:17397039-17397058 | MS.gene033130:CDS | 45.0% | |
| GGCGACAATCATGAGAAGAA+AGG | + | chr8.2:17398899-17398918 | MS.gene033130:CDS | 45.0% | |
| GGGTATTCCCTACATGTATC+AGG | - | chr8.2:17398876-17398895 | None:intergenic | 45.0% | |
| TACCTTCCGCTTGGTCATAT+TGG | - | chr8.2:17399253-17399272 | None:intergenic | 45.0% | |
| TCACTGCTACCCCCATAAAA+TGG | + | chr8.2:17398189-17398208 | MS.gene033130:CDS | 45.0% | |
| TCGTTCCGCTTATCGTAAAC+CGG | - | chr8.2:17397260-17397279 | None:intergenic | 45.0% | |
| TCTGAAGAGGATGACGAAGA+GGG | + | chr8.2:17401229-17401248 | MS.gene033130:CDS | 45.0% | |
| TGTTGTTCCTTCTTCACGGA+AGG | - | chr8.2:17398165-17398184 | None:intergenic | 45.0% | |
| TTCAGTAGTTCACTGAGGGT+AGG | - | chr8.2:17397451-17397470 | None:intergenic | 45.0% | |
| TTCCAATATGACCAAGCGGA+AGG | + | chr8.2:17399248-17399267 | MS.gene033130:intron | 45.0% | |
| TTCGGTGAGTTTCTGCTTCT+TGG | - | chr8.2:17396966-17396985 | None:intergenic | 45.0% | |
| TTGATGTCCTAATTGACGGC+AGG | - | chr8.2:17399141-17399160 | None:intergenic | 45.0% | |
| TTGTTCGCAGGAAAAAGACG+AGG | + | chr8.2:17401201-17401220 | MS.gene033130:intron | 45.0% | |
| ! | AGAGTATCTTTATGCCTGGC+TGG | + | chr8.2:17399879-17399898 | MS.gene033130:intron | 45.0% |
| ! | AGCACACAAGTTTTACTGGC+AGG | - | chr8.2:17399762-17399781 | None:intergenic | 45.0% |
| ! | ATAGCGGAGCTATTGTCTAG+CGG | - | chr8.2:17399517-17399536 | None:intergenic | 45.0% |
| ! | CGATGATGAAGCTGATGATG+AGG | + | chr8.2:17400599-17400618 | MS.gene033130:CDS | 45.0% |
| ! | GCACACAAGTTTTACTGGCA+GGG | - | chr8.2:17399761-17399780 | None:intergenic | 45.0% |
| ! | TGATTGGAGGTTTGGGATCA+GGG | + | chr8.2:17399689-17399708 | MS.gene033130:intron | 45.0% |
| ! | TGTTTCGTTTTGTCCACGCT+GGG | - | chr8.2:17397628-17397647 | None:intergenic | 45.0% |
| ! | TTGATTGGAGGTTTGGGATC+AGG | + | chr8.2:17399688-17399707 | MS.gene033130:intron | 45.0% |
| ! | TTTTACTGGCAGGGACCTAT+TGG | - | chr8.2:17399752-17399771 | None:intergenic | 45.0% |
| !! | ATATAGTGGACCCAAGCTCA+TGG | + | chr8.2:17398781-17398800 | MS.gene033130:intron | 45.0% |
| !! | GTACCTTTTCGAGGTCATCT+TGG | - | chr8.2:17397045-17397064 | None:intergenic | 45.0% |
| !! | TTGTTCAGGTTGTTGAGGTC+TGG | - | chr8.2:17399395-17399414 | None:intergenic | 45.0% |
| AAAGGCCTCCTGTTGATGTC+AGG | + | chr8.2:17398927-17398946 | MS.gene033130:CDS | 50.0% | |
| ACCAACCTGACATCAACAGG+AGG | - | chr8.2:17398935-17398954 | None:intergenic | 50.0% | |
| ACGGATGGCCCCATATTTGA+CGG | + | chr8.2:17399619-17399638 | MS.gene033130:intron | 50.0% | |
| CAAGAACAAATGGGGAGGGT+TGG | + | chr8.2:17398650-17398669 | MS.gene033130:intron | 50.0% | |
| CATGGACAAAGCTGGAGAGT+GGG | - | chr8.2:17399095-17399114 | None:intergenic | 50.0% | |
| GAAGAGGGGGAAGAGAAGAA+GGG | - | chr8.2:17397949-17397968 | None:intergenic | 50.0% | |
| GACACCAACCTGACATCAAC+AGG | - | chr8.2:17398938-17398957 | None:intergenic | 50.0% | |
| GTAGTTCACTGAGGGTAGGA+TGG | - | chr8.2:17397447-17397466 | None:intergenic | 50.0% | |
| TAGCGGAGCTATTGTCTAGC+GGG | - | chr8.2:17399516-17399535 | None:intergenic | 50.0% | |
| TATGGCTGACATTCACGACG+AGG | + | chr8.2:17400214-17400233 | MS.gene033130:CDS | 50.0% | |
| TCATCGGCATCCTCTTCATC+AGG | - | chr8.2:17400585-17400604 | None:intergenic | 50.0% | |
| TCATGGACAAAGCTGGAGAG+TGG | - | chr8.2:17399096-17399115 | None:intergenic | 50.0% | |
| TGCGGTGATACTGTGCATAC+TGG | + | chr8.2:17400759-17400778 | MS.gene033130:intron | 50.0% | |
| ! | CTCTGAAGAGGATGACGAAG+AGG | + | chr8.2:17401228-17401247 | MS.gene033130:CDS | 50.0% |
| ! | CTGTTTCGTTTTGTCCACGC+TGG | - | chr8.2:17397629-17397648 | None:intergenic | 50.0% |
| ! | GAAGAGGGTGATGATGAGGA+AGG | + | chr8.2:17401244-17401263 | MS.gene033130:CDS | 50.0% |
| ! | GATTGGAGGTTTGGGATCAG+GGG | + | chr8.2:17399690-17399709 | MS.gene033130:intron | 50.0% |
| ! | GGAAGCCGGTTTACGATAAG+CGG | + | chr8.2:17397252-17397271 | MS.gene033130:CDS | 50.0% |
| ! | GTTGAGGTCTGGAACGAACA+GGG | - | chr8.2:17399384-17399403 | None:intergenic | 50.0% |
| ! | TGACGAAGAGGGTGATGATG+AGG | + | chr8.2:17401240-17401259 | MS.gene033130:CDS | 50.0% |
| ! | TGTTGAGGTCTGGAACGAAC+AGG | - | chr8.2:17399385-17399404 | None:intergenic | 50.0% |
| !! | CTCTTCCATCGACTCCTGAA+AGG | - | chr8.2:17399863-17399882 | None:intergenic | 50.0% |
| !!! | GTAGTAGTTTTGACCCAGCG+TGG | + | chr8.2:17397612-17397631 | MS.gene033130:intron | 50.0% |
| ACAGGAGGAGCCTGATGAAG+AGG | + | chr8.2:17400572-17400591 | MS.gene033130:intron | 55.0% | |
| ACTTGGGGGTTGCACAAGAC+AGG | + | chr8.2:17398554-17398573 | MS.gene033130:intron | 55.0% | |
| AGAGTAATGCACAGCCAGCC+AGG | - | chr8.2:17399896-17399915 | None:intergenic | 55.0% | |
| ATGGCCCCATATTTGACGGG+TGG | + | chr8.2:17399623-17399642 | MS.gene033130:intron | 55.0% | |
| CGGATGGCCCCATATTTGAC+GGG | + | chr8.2:17399620-17399639 | MS.gene033130:intron | 55.0% | |
| CTTGGGGGTTGCACAAGACA+GGG | + | chr8.2:17398555-17398574 | MS.gene033130:intron | 55.0% | |
| GCCTCCTGTTGATGTCAGGT+TGG | + | chr8.2:17398931-17398950 | MS.gene033130:intron | 55.0% | |
| GGAAGAGGGGGAAGAGAAGA+AGG | - | chr8.2:17397950-17397969 | None:intergenic | 55.0% | |
| ! | AGACGAGGACGACTCTGAAG+AGG | + | chr8.2:17401216-17401235 | MS.gene033130:CDS | 55.0% |
| ! | GAGGTTTGGGATCAGGGGTA+TGG | + | chr8.2:17399695-17399714 | MS.gene033130:intron | 55.0% |
| ! | GTTTGGGATCAGGGGTATGG+TGG | + | chr8.2:17399698-17399717 | MS.gene033130:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 17396947 | 17401273 | 17396947 | ID=MS.gene033130 |
| chr8.2 | mRNA | 17396947 | 17401273 | 17396947 | ID=MS.gene033130.t1;Parent=MS.gene033130 |
| chr8.2 | exon | 17396947 | 17397060 | 17396947 | ID=MS.gene033130.t1.exon1;Parent=MS.gene033130.t1 |
| chr8.2 | CDS | 17396947 | 17397060 | 17396947 | ID=cds.MS.gene033130.t1;Parent=MS.gene033130.t1 |
| chr8.2 | exon | 17397194 | 17397316 | 17397194 | ID=MS.gene033130.t1.exon2;Parent=MS.gene033130.t1 |
| chr8.2 | CDS | 17397194 | 17397316 | 17397194 | ID=cds.MS.gene033130.t1;Parent=MS.gene033130.t1 |
| chr8.2 | exon | 17397436 | 17397486 | 17397436 | ID=MS.gene033130.t1.exon3;Parent=MS.gene033130.t1 |
| chr8.2 | CDS | 17397436 | 17397486 | 17397436 | ID=cds.MS.gene033130.t1;Parent=MS.gene033130.t1 |
| chr8.2 | exon | 17397866 | 17397937 | 17397866 | ID=MS.gene033130.t1.exon4;Parent=MS.gene033130.t1 |
| chr8.2 | CDS | 17397866 | 17397937 | 17397866 | ID=cds.MS.gene033130.t1;Parent=MS.gene033130.t1 |
| chr8.2 | exon | 17398110 | 17398223 | 17398110 | ID=MS.gene033130.t1.exon5;Parent=MS.gene033130.t1 |
| chr8.2 | CDS | 17398110 | 17398223 | 17398110 | ID=cds.MS.gene033130.t1;Parent=MS.gene033130.t1 |
| chr8.2 | exon | 17398887 | 17398948 | 17398887 | ID=MS.gene033130.t1.exon6;Parent=MS.gene033130.t1 |
| chr8.2 | CDS | 17398887 | 17398948 | 17398887 | ID=cds.MS.gene033130.t1;Parent=MS.gene033130.t1 |
| chr8.2 | exon | 17400175 | 17400235 | 17400175 | ID=MS.gene033130.t1.exon7;Parent=MS.gene033130.t1 |
| chr8.2 | CDS | 17400175 | 17400235 | 17400175 | ID=cds.MS.gene033130.t1;Parent=MS.gene033130.t1 |
| chr8.2 | exon | 17400397 | 17400453 | 17400397 | ID=MS.gene033130.t1.exon8;Parent=MS.gene033130.t1 |
| chr8.2 | CDS | 17400397 | 17400453 | 17400397 | ID=cds.MS.gene033130.t1;Parent=MS.gene033130.t1 |
| chr8.2 | exon | 17400576 | 17400620 | 17400576 | ID=MS.gene033130.t1.exon9;Parent=MS.gene033130.t1 |
| chr8.2 | CDS | 17400576 | 17400620 | 17400576 | ID=cds.MS.gene033130.t1;Parent=MS.gene033130.t1 |
| chr8.2 | exon | 17401211 | 17401273 | 17401211 | ID=MS.gene033130.t1.exon10;Parent=MS.gene033130.t1 |
| chr8.2 | CDS | 17401211 | 17401273 | 17401211 | ID=cds.MS.gene033130.t1;Parent=MS.gene033130.t1 |
| Gene Sequence |
| Protein sequence |
