Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28923.t1 | XP_003607307.1 | 98.3 | 179 | 3 | 0 | 1 | 179 | 1 | 179 | 4.40E-96 | 360.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28923.t1 | Q8L7T3 | 81.1 | 180 | 31 | 1 | 1 | 177 | 1 | 180 | 4.6e-78 | 292.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28923.t1 | G7JQK2 | 98.3 | 179 | 3 | 0 | 1 | 179 | 1 | 179 | 3.2e-96 | 360.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049298 | MS.gene28923 | 0.829311 | 5.53E-55 | -1.69E-46 |
| MS.gene050707 | MS.gene28923 | 0.838134 | 3.44E-57 | -1.69E-46 |
| MS.gene050875 | MS.gene28923 | 0.823552 | 1.30E-53 | -1.69E-46 |
| MS.gene051896 | MS.gene28923 | 0.816439 | 5.53E-52 | -1.69E-46 |
| MS.gene051914 | MS.gene28923 | 0.883232 | 5.34E-71 | -1.69E-46 |
| MS.gene051955 | MS.gene28923 | 0.840093 | 1.07E-57 | -1.69E-46 |
| MS.gene052143 | MS.gene28923 | 0.848809 | 4.84E-60 | -1.69E-46 |
| MS.gene052308 | MS.gene28923 | 0.968058 | 3.85E-128 | -1.69E-46 |
| MS.gene052367 | MS.gene28923 | 0.869214 | 3.66E-66 | -1.69E-46 |
| MS.gene053173 | MS.gene28923 | 0.877688 | 5.14E-69 | -1.69E-46 |
| MS.gene053348 | MS.gene28923 | 0.85116 | 1.06E-60 | -1.69E-46 |
| MS.gene053416 | MS.gene28923 | 0.815692 | 8.12E-52 | -1.69E-46 |
| MS.gene053417 | MS.gene28923 | 0.813897 | 2.03E-51 | -1.69E-46 |
| MS.gene054551 | MS.gene28923 | 0.891998 | 2.38E-74 | -1.69E-46 |
| MS.gene054552 | MS.gene28923 | 0.832017 | 1.20E-55 | -1.69E-46 |
| MS.gene054593 | MS.gene28923 | 0.885667 | 6.67E-72 | -1.69E-46 |
| MS.gene054633 | MS.gene28923 | 0.858735 | 6.72E-63 | -1.69E-46 |
| MS.gene054662 | MS.gene28923 | 0.851407 | 9.06E-61 | -1.69E-46 |
| MS.gene054850 | MS.gene28923 | 0.826105 | 3.26E-54 | -1.69E-46 |
| MS.gene054941 | MS.gene28923 | 0.850138 | 2.06E-60 | -1.69E-46 |
| MS.gene055308 | MS.gene28923 | 0.889547 | 2.20E-73 | -1.69E-46 |
| MS.gene055578 | MS.gene28923 | 0.922056 | 1.61E-88 | -1.69E-46 |
| MS.gene055579 | MS.gene28923 | 0.853426 | 2.41E-61 | -1.69E-46 |
| MS.gene055957 | MS.gene28923 | 0.855989 | 4.36E-62 | -1.69E-46 |
| MS.gene056041 | MS.gene28923 | 0.91044 | 1.87E-82 | -1.69E-46 |
| MS.gene056042 | MS.gene28923 | 0.827896 | 1.21E-54 | -1.69E-46 |
| MS.gene05640 | MS.gene28923 | 0.894525 | 2.27E-75 | -1.69E-46 |
| MS.gene056526 | MS.gene28923 | 0.8111 | 8.29E-51 | -1.69E-46 |
| MS.gene056528 | MS.gene28923 | 0.845184 | 4.76E-59 | -1.69E-46 |
| MS.gene05652 | MS.gene28923 | 0.891689 | 3.16E-74 | -1.69E-46 |
| MS.gene057101 | MS.gene28923 | 0.801388 | 9.22E-49 | -1.69E-46 |
| MS.gene057367 | MS.gene28923 | 0.826851 | 2.16E-54 | -1.69E-46 |
| MS.gene057458 | MS.gene28923 | 0.867752 | 1.09E-65 | -1.69E-46 |
| MS.gene057669 | MS.gene28923 | 0.837003 | 6.72E-57 | -1.69E-46 |
| MS.gene058013 | MS.gene28923 | 0.814205 | 1.73E-51 | -1.69E-46 |
| MS.gene058128 | MS.gene28923 | 0.918826 | 9.64E-87 | -1.69E-46 |
| MS.gene058849 | MS.gene28923 | 0.828724 | 7.67E-55 | -1.69E-46 |
| MS.gene058853 | MS.gene28923 | 0.910579 | 1.60E-82 | -1.69E-46 |
| MS.gene05926 | MS.gene28923 | 0.844259 | 8.44E-59 | -1.69E-46 |
| MS.gene059553 | MS.gene28923 | 0.831774 | 1.38E-55 | -1.69E-46 |
| MS.gene059616 | MS.gene28923 | 0.890287 | 1.13E-73 | -1.69E-46 |
| MS.gene059905 | MS.gene28923 | 0.801833 | 7.47E-49 | -1.69E-46 |
| MS.gene060473 | MS.gene28923 | 0.878779 | 2.13E-69 | -1.69E-46 |
| MS.gene060565 | MS.gene28923 | 0.859687 | 3.48E-63 | -1.69E-46 |
| MS.gene060825 | MS.gene28923 | 0.817883 | 2.62E-52 | -1.69E-46 |
| MS.gene06093 | MS.gene28923 | 0.872114 | 4.08E-67 | -1.69E-46 |
| MS.gene060985 | MS.gene28923 | 0.808506 | 3.00E-50 | -1.69E-46 |
| MS.gene061099 | MS.gene28923 | 0.880763 | 4.20E-70 | -1.69E-46 |
| MS.gene061260 | MS.gene28923 | 0.881358 | 2.57E-70 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene28923 | MS.gene08774 | PPI |
| MS.gene28923 | MS.gene033130 | PPI |
| MS.gene28923 | MS.gene58439 | PPI |
| MS.gene28923 | MS.gene060634 | PPI |
| MS.gene28923 | MS.gene031830 | PPI |
| MS.gene40572 | MS.gene28923 | PPI |
| MS.gene052308 | MS.gene28923 | PPI |
| MS.gene28923 | MS.gene049883 | PPI |
| MS.gene28923 | MS.gene21952 | PPI |
| MS.gene28923 | MS.gene22290 | PPI |
| MS.gene28923 | MS.gene052308 | PPI |
| MS.gene21678 | MS.gene28923 | PPI |
| MS.gene28923 | MS.gene023529 | PPI |
| MS.gene28923 | MS.gene003373 | PPI |
| MS.gene28923 | MS.gene024700 | PPI |
| MS.gene28923 | MS.gene060137 | PPI |
| MS.gene28923 | MS.gene08926 | PPI |
| MS.gene28923 | MS.gene056800 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28923.t1 | MTR_4g076200 | 98.324 | 179 | 3 | 0 | 1 | 179 | 1 | 179 | 5.75e-132 | 367 |
| MS.gene28923.t1 | MTR_5g009020 | 85.311 | 177 | 26 | 0 | 1 | 177 | 1 | 177 | 1.31e-114 | 323 |
| MS.gene28923.t1 | MTR_4g076200 | 97.826 | 138 | 3 | 0 | 42 | 179 | 1 | 138 | 7.30e-101 | 286 |
| MS.gene28923.t1 | MTR_1g095510 | 66.871 | 163 | 53 | 1 | 18 | 179 | 27 | 189 | 3.30e-75 | 224 |
| MS.gene28923.t1 | MTR_1g095510 | 68.148 | 135 | 43 | 0 | 45 | 179 | 1 | 135 | 2.03e-64 | 194 |
| MS.gene28923.t1 | MTR_1g095510 | 60.123 | 163 | 44 | 2 | 18 | 179 | 27 | 169 | 9.53e-62 | 189 |
| MS.gene28923.t1 | MTR_4g108080 | 46.853 | 143 | 75 | 1 | 30 | 171 | 2 | 144 | 3.26e-40 | 134 |
| MS.gene28923.t1 | MTR_8g468530 | 45.517 | 145 | 78 | 1 | 30 | 173 | 18 | 162 | 1.09e-39 | 132 |
| MS.gene28923.t1 | MTR_2g078010 | 45.312 | 128 | 70 | 0 | 35 | 162 | 8 | 135 | 8.52e-35 | 119 |
| MS.gene28923.t1 | MTR_2g078010 | 45.312 | 128 | 70 | 0 | 35 | 162 | 8 | 135 | 1.15e-34 | 119 |
| MS.gene28923.t1 | MTR_8g071040 | 43.750 | 128 | 72 | 0 | 35 | 162 | 4 | 131 | 2.12e-34 | 119 |
| MS.gene28923.t1 | MTR_4g073240 | 44.715 | 123 | 68 | 0 | 35 | 157 | 4 | 126 | 7.62e-34 | 117 |
| MS.gene28923.t1 | MTR_3g062450 | 44.355 | 124 | 69 | 0 | 35 | 158 | 4 | 127 | 1.33e-33 | 116 |
| MS.gene28923.t1 | MTR_5g075580 | 44.355 | 124 | 69 | 0 | 35 | 158 | 4 | 127 | 1.48e-33 | 116 |
| MS.gene28923.t1 | MTR_7g116940 | 43.548 | 124 | 70 | 0 | 35 | 158 | 4 | 127 | 3.88e-33 | 115 |
| MS.gene28923.t1 | MTR_1g021150 | 42.969 | 128 | 73 | 0 | 35 | 162 | 4 | 131 | 9.23e-33 | 114 |
| MS.gene28923.t1 | MTR_2g078010 | 41.549 | 142 | 69 | 1 | 35 | 162 | 8 | 149 | 4.12e-32 | 113 |
| MS.gene28923.t1 | MTR_4g108080 | 48.624 | 109 | 56 | 0 | 30 | 138 | 2 | 110 | 1.45e-30 | 108 |
| MS.gene28923.t1 | MTR_1g021150 | 40.769 | 130 | 77 | 0 | 33 | 162 | 10 | 139 | 2.56e-30 | 108 |
| MS.gene28923.t1 | MTR_7g116940 | 41.221 | 131 | 70 | 1 | 35 | 158 | 4 | 134 | 4.37e-30 | 108 |
| MS.gene28923.t1 | MTR_4g073240 | 48.454 | 97 | 50 | 0 | 61 | 157 | 1 | 97 | 1.05e-29 | 105 |
| MS.gene28923.t1 | MTR_5g075580 | 47.959 | 98 | 51 | 0 | 61 | 158 | 1 | 98 | 2.13e-29 | 105 |
| MS.gene28923.t1 | MTR_4g108080 | 51.000 | 100 | 48 | 1 | 73 | 171 | 45 | 144 | 2.52e-28 | 103 |
| MS.gene28923.t1 | MTR_2g078010 | 45.545 | 101 | 55 | 0 | 35 | 135 | 8 | 108 | 6.49e-27 | 98.6 |
| MS.gene28923.t1 | MTR_4g063490 | 36.641 | 131 | 69 | 2 | 57 | 173 | 30 | 160 | 1.73e-26 | 99.4 |
| MS.gene28923.t1 | MTR_8g085690 | 38.710 | 124 | 76 | 0 | 35 | 158 | 25 | 148 | 4.30e-26 | 98.2 |
| MS.gene28923.t1 | MTR_7g116940 | 41.509 | 106 | 62 | 0 | 35 | 140 | 4 | 109 | 1.03e-25 | 95.9 |
| MS.gene28923.t1 | MTR_2g096690 | 36.641 | 131 | 69 | 2 | 57 | 173 | 30 | 160 | 1.27e-24 | 94.4 |
| MS.gene28923.t1 | MTR_2g096690 | 36.154 | 130 | 70 | 1 | 57 | 173 | 30 | 159 | 1.47e-24 | 94.4 |
| MS.gene28923.t1 | MTR_3g098780 | 37.778 | 135 | 80 | 3 | 36 | 168 | 6 | 138 | 6.19e-24 | 93.2 |
| MS.gene28923.t1 | MTR_3g098780 | 37.778 | 135 | 80 | 3 | 36 | 168 | 30 | 162 | 7.62e-24 | 93.6 |
| MS.gene28923.t1 | MTR_3g110110 | 38.393 | 112 | 68 | 1 | 47 | 157 | 20 | 131 | 3.27e-23 | 90.5 |
| MS.gene28923.t1 | MTR_4g094872 | 36.620 | 142 | 82 | 3 | 36 | 169 | 8 | 149 | 2.07e-21 | 85.9 |
| MS.gene28923.t1 | MTR_5g016630 | 35.616 | 146 | 86 | 3 | 36 | 173 | 8 | 153 | 2.51e-21 | 85.5 |
| MS.gene28923.t1 | MTR_4g106690 | 35.200 | 125 | 76 | 4 | 35 | 157 | 6 | 127 | 1.93e-19 | 81.3 |
| MS.gene28923.t1 | MTR_5g019480 | 38.144 | 97 | 57 | 1 | 73 | 169 | 21 | 114 | 5.71e-18 | 76.3 |
| MS.gene28923.t1 | MTR_5g019480 | 32.090 | 134 | 87 | 2 | 36 | 169 | 33 | 162 | 1.16e-17 | 76.6 |
| MS.gene28923.t1 | MTR_5g019480 | 38.144 | 97 | 57 | 1 | 73 | 169 | 72 | 165 | 1.20e-17 | 76.6 |
| MS.gene28923.t1 | MTR_8g028920 | 33.600 | 125 | 78 | 4 | 35 | 157 | 6 | 127 | 2.40e-17 | 75.9 |
| MS.gene28923.t1 | MTR_7g087590 | 30.968 | 155 | 99 | 2 | 18 | 171 | 3 | 150 | 3.36e-17 | 77.0 |
| MS.gene28923.t1 | MTR_4g073240 | 50.820 | 61 | 30 | 0 | 97 | 157 | 4 | 64 | 5.61e-16 | 69.7 |
| MS.gene28923.t1 | MTR_8g098595 | 36.667 | 90 | 55 | 2 | 70 | 157 | 23 | 112 | 1.78e-15 | 70.5 |
| MS.gene28923.t1 | MTR_8g076490 | 36.364 | 99 | 61 | 2 | 36 | 133 | 19 | 116 | 2.27e-15 | 70.1 |
| MS.gene28923.t1 | MTR_8g028920 | 36.905 | 84 | 51 | 2 | 76 | 157 | 5 | 88 | 9.26e-15 | 68.2 |
| MS.gene28923.t1 | MTR_5g021260 | 34.906 | 106 | 67 | 2 | 30 | 134 | 13 | 117 | 3.90e-14 | 67.0 |
| MS.gene28923.t1 | MTR_2g096690 | 44.615 | 65 | 36 | 0 | 57 | 121 | 30 | 94 | 8.28e-14 | 65.1 |
| MS.gene28923.t1 | MTR_4g121960 | 29.530 | 149 | 87 | 5 | 33 | 174 | 11 | 148 | 3.34e-12 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28923.t1 | AT3G20060 | 80.791 | 177 | 30 | 1 | 1 | 173 | 1 | 177 | 1.79e-101 | 290 |
| MS.gene28923.t1 | AT1G50490 | 81.111 | 180 | 31 | 1 | 1 | 177 | 1 | 180 | 3.12e-97 | 279 |
| MS.gene28923.t1 | AT3G20060 | 86.765 | 136 | 18 | 0 | 42 | 177 | 1 | 136 | 2.99e-87 | 252 |
| MS.gene28923.t1 | AT2G02760 | 46.154 | 143 | 76 | 1 | 30 | 171 | 2 | 144 | 1.78e-39 | 132 |
| MS.gene28923.t1 | AT2G02760 | 46.154 | 143 | 76 | 1 | 30 | 171 | 2 | 144 | 1.78e-39 | 132 |
| MS.gene28923.t1 | AT2G02760 | 46.154 | 143 | 76 | 1 | 30 | 171 | 2 | 144 | 1.78e-39 | 132 |
| MS.gene28923.t1 | AT2G02760 | 46.154 | 143 | 76 | 1 | 30 | 171 | 2 | 144 | 1.78e-39 | 132 |
| MS.gene28923.t1 | AT1G14400 | 46.154 | 143 | 76 | 1 | 30 | 171 | 2 | 144 | 1.88e-39 | 132 |
| MS.gene28923.t1 | AT1G14400 | 46.154 | 143 | 76 | 1 | 30 | 171 | 2 | 144 | 1.88e-39 | 132 |
| MS.gene28923.t1 | AT5G62540 | 46.479 | 142 | 74 | 2 | 30 | 169 | 2 | 143 | 5.27e-37 | 125 |
| MS.gene28923.t1 | AT1G78870 | 46.094 | 128 | 69 | 0 | 35 | 162 | 8 | 135 | 2.14e-35 | 121 |
| MS.gene28923.t1 | AT1G16890 | 45.312 | 128 | 70 | 0 | 35 | 162 | 8 | 135 | 7.77e-35 | 120 |
| MS.gene28923.t1 | AT5G56150 | 45.161 | 124 | 68 | 0 | 35 | 158 | 4 | 127 | 4.74e-34 | 118 |
| MS.gene28923.t1 | AT1G16890 | 46.923 | 130 | 67 | 1 | 35 | 162 | 15 | 144 | 5.11e-34 | 118 |
| MS.gene28923.t1 | AT1G64230 | 44.355 | 124 | 69 | 0 | 35 | 158 | 4 | 127 | 1.78e-33 | 116 |
| MS.gene28923.t1 | AT1G64230 | 44.355 | 124 | 69 | 0 | 35 | 158 | 4 | 127 | 1.78e-33 | 116 |
| MS.gene28923.t1 | AT2G16740 | 41.176 | 136 | 79 | 1 | 35 | 169 | 4 | 139 | 2.21e-33 | 116 |
| MS.gene28923.t1 | AT4G27960 | 41.860 | 129 | 75 | 0 | 35 | 163 | 4 | 132 | 2.44e-33 | 116 |
| MS.gene28923.t1 | AT3G08700 | 42.029 | 138 | 78 | 2 | 35 | 170 | 4 | 141 | 6.10e-33 | 115 |
| MS.gene28923.t1 | AT3G08700 | 42.029 | 138 | 78 | 2 | 35 | 170 | 4 | 141 | 6.10e-33 | 115 |
| MS.gene28923.t1 | AT3G08690 | 43.548 | 124 | 70 | 0 | 35 | 158 | 4 | 127 | 6.54e-33 | 115 |
| MS.gene28923.t1 | AT3G08690 | 43.548 | 124 | 70 | 0 | 35 | 158 | 4 | 127 | 6.54e-33 | 115 |
| MS.gene28923.t1 | AT5G53300 | 41.085 | 129 | 76 | 0 | 35 | 163 | 4 | 132 | 1.08e-32 | 114 |
| MS.gene28923.t1 | AT5G53300 | 41.085 | 129 | 76 | 0 | 35 | 163 | 4 | 132 | 1.08e-32 | 114 |
| MS.gene28923.t1 | AT5G53300 | 41.085 | 129 | 76 | 0 | 35 | 163 | 4 | 132 | 1.08e-32 | 114 |
| MS.gene28923.t1 | AT5G41700 | 42.742 | 124 | 71 | 0 | 35 | 158 | 4 | 127 | 1.41e-32 | 114 |
| MS.gene28923.t1 | AT5G41700 | 42.742 | 124 | 71 | 0 | 35 | 158 | 4 | 127 | 1.41e-32 | 114 |
| MS.gene28923.t1 | AT5G41700 | 42.742 | 124 | 71 | 0 | 35 | 158 | 4 | 127 | 1.41e-32 | 114 |
| MS.gene28923.t1 | AT4G27960 | 41.860 | 129 | 75 | 0 | 35 | 163 | 34 | 162 | 3.94e-32 | 114 |
| MS.gene28923.t1 | AT5G41700 | 43.200 | 125 | 70 | 1 | 35 | 158 | 4 | 128 | 6.79e-31 | 110 |
| MS.gene28923.t1 | AT1G64230 | 41.353 | 133 | 69 | 1 | 35 | 158 | 4 | 136 | 1.91e-30 | 108 |
| MS.gene28923.t1 | AT1G64230 | 46.602 | 103 | 55 | 0 | 56 | 158 | 67 | 169 | 1.27e-29 | 107 |
| MS.gene28923.t1 | AT1G64230 | 46.602 | 103 | 55 | 0 | 56 | 158 | 67 | 169 | 1.27e-29 | 107 |
| MS.gene28923.t1 | AT1G16890 | 50.526 | 95 | 47 | 0 | 68 | 162 | 8 | 102 | 4.65e-29 | 104 |
| MS.gene28923.t1 | AT1G78870 | 50.526 | 95 | 47 | 0 | 68 | 162 | 8 | 102 | 5.07e-29 | 104 |
| MS.gene28923.t1 | AT1G78870 | 45.714 | 105 | 57 | 0 | 35 | 139 | 8 | 112 | 5.68e-28 | 101 |
| MS.gene28923.t1 | AT1G78870 | 50.000 | 96 | 47 | 1 | 68 | 162 | 8 | 103 | 1.26e-27 | 100 |
| MS.gene28923.t1 | AT3G13550 | 37.500 | 136 | 85 | 0 | 35 | 170 | 39 | 174 | 6.05e-27 | 100 |
| MS.gene28923.t1 | AT1G36340 | 40.876 | 137 | 79 | 2 | 26 | 162 | 3 | 137 | 5.91e-26 | 97.4 |
| MS.gene28923.t1 | AT1G36340 | 40.876 | 137 | 79 | 2 | 26 | 162 | 3 | 137 | 5.91e-26 | 97.4 |
| MS.gene28923.t1 | AT5G50870 | 41.935 | 124 | 67 | 3 | 34 | 155 | 4 | 124 | 1.08e-25 | 97.8 |
| MS.gene28923.t1 | AT5G50870 | 41.935 | 124 | 67 | 3 | 34 | 155 | 4 | 124 | 1.36e-25 | 97.8 |
| MS.gene28923.t1 | AT5G56150 | 43.000 | 100 | 57 | 0 | 35 | 134 | 4 | 103 | 1.73e-25 | 95.1 |
| MS.gene28923.t1 | AT5G41700 | 40.385 | 104 | 62 | 0 | 35 | 138 | 4 | 107 | 2.47e-24 | 93.2 |
| MS.gene28923.t1 | AT3G13550 | 39.640 | 111 | 67 | 0 | 35 | 145 | 39 | 149 | 3.51e-24 | 93.2 |
| MS.gene28923.t1 | AT3G55380 | 35.115 | 131 | 71 | 2 | 57 | 173 | 31 | 161 | 8.54e-24 | 92.4 |
| MS.gene28923.t1 | AT5G53300 | 40.404 | 99 | 59 | 0 | 35 | 133 | 4 | 102 | 9.48e-24 | 90.5 |
| MS.gene28923.t1 | AT5G59300 | 35.115 | 131 | 71 | 2 | 57 | 173 | 30 | 160 | 9.57e-24 | 92.0 |
| MS.gene28923.t1 | AT3G46460 | 35.878 | 131 | 70 | 2 | 57 | 173 | 30 | 160 | 1.65e-23 | 91.7 |
| MS.gene28923.t1 | AT5G25760 | 38.739 | 111 | 67 | 1 | 48 | 157 | 21 | 131 | 3.35e-23 | 90.5 |
| MS.gene28923.t1 | AT5G25760 | 38.739 | 111 | 67 | 1 | 48 | 157 | 21 | 131 | 3.35e-23 | 90.5 |
| MS.gene28923.t1 | AT1G63800 | 37.600 | 125 | 73 | 4 | 35 | 157 | 6 | 127 | 5.72e-21 | 85.5 |
| MS.gene28923.t1 | AT3G57870 | 36.620 | 142 | 82 | 3 | 36 | 169 | 9 | 150 | 1.57e-20 | 83.6 |
| MS.gene28923.t1 | AT5G41340 | 36.800 | 125 | 74 | 4 | 35 | 157 | 6 | 127 | 2.09e-20 | 84.0 |
| MS.gene28923.t1 | AT2G18600 | 34.959 | 123 | 77 | 3 | 36 | 157 | 35 | 155 | 5.70e-19 | 80.1 |
| MS.gene28923.t1 | AT2G18600 | 34.959 | 123 | 77 | 3 | 36 | 157 | 35 | 155 | 5.70e-19 | 80.1 |
| MS.gene28923.t1 | AT1G63800 | 40.217 | 92 | 53 | 2 | 68 | 157 | 21 | 112 | 8.45e-19 | 79.3 |
| MS.gene28923.t1 | AT2G46030 | 35.200 | 125 | 76 | 4 | 35 | 157 | 6 | 127 | 1.30e-18 | 79.3 |
| MS.gene28923.t1 | AT2G46030 | 35.200 | 125 | 76 | 4 | 35 | 157 | 6 | 127 | 1.30e-18 | 79.3 |
| MS.gene28923.t1 | AT5G05080 | 33.099 | 142 | 93 | 2 | 32 | 172 | 10 | 150 | 7.16e-18 | 78.6 |
| MS.gene28923.t1 | AT5G05080 | 33.099 | 142 | 93 | 2 | 32 | 172 | 10 | 150 | 7.16e-18 | 78.6 |
| MS.gene28923.t1 | AT5G05080 | 33.099 | 142 | 93 | 2 | 32 | 172 | 10 | 150 | 7.16e-18 | 78.6 |
| MS.gene28923.t1 | AT5G05080 | 33.099 | 142 | 93 | 2 | 32 | 172 | 10 | 150 | 7.16e-18 | 78.6 |
| MS.gene28923.t1 | AT2G46030 | 35.200 | 125 | 76 | 4 | 35 | 157 | 78 | 199 | 9.15e-18 | 78.6 |
| MS.gene28923.t1 | AT4G36800 | 31.148 | 122 | 83 | 1 | 36 | 157 | 34 | 154 | 5.43e-17 | 75.1 |
| MS.gene28923.t1 | AT4G36800 | 31.148 | 122 | 83 | 1 | 36 | 157 | 34 | 154 | 5.43e-17 | 75.1 |
| MS.gene28923.t1 | AT3G55380 | 27.907 | 172 | 75 | 4 | 51 | 173 | 24 | 195 | 1.99e-16 | 73.9 |
| MS.gene28923.t1 | AT3G46460 | 33.333 | 111 | 60 | 2 | 77 | 173 | 8 | 118 | 5.28e-16 | 70.9 |
| MS.gene28923.t1 | AT3G46460 | 33.333 | 111 | 60 | 2 | 77 | 173 | 8 | 118 | 5.28e-16 | 70.9 |
| MS.gene28923.t1 | AT2G46030 | 35.644 | 101 | 63 | 2 | 59 | 157 | 30 | 130 | 7.38e-16 | 72.0 |
| MS.gene28923.t1 | AT2G46030 | 35.644 | 101 | 63 | 2 | 59 | 157 | 30 | 130 | 7.38e-16 | 72.0 |
| MS.gene28923.t1 | AT5G41340 | 40.000 | 85 | 49 | 2 | 75 | 157 | 8 | 92 | 8.25e-16 | 71.2 |
| MS.gene28923.t1 | AT3G24515 | 37.391 | 115 | 63 | 4 | 68 | 173 | 51 | 165 | 9.78e-16 | 74.3 |
| MS.gene28923.t1 | AT3G24515 | 37.391 | 115 | 63 | 4 | 68 | 173 | 76 | 190 | 1.41e-15 | 73.9 |
| MS.gene28923.t1 | AT1G45050 | 33.929 | 112 | 72 | 2 | 24 | 134 | 7 | 117 | 6.38e-15 | 68.9 |
| MS.gene28923.t1 | AT1G75440 | 34.234 | 111 | 71 | 2 | 24 | 133 | 7 | 116 | 2.66e-14 | 67.4 |
| MS.gene28923.t1 | AT5G42990 | 33.929 | 112 | 72 | 2 | 24 | 134 | 7 | 117 | 2.80e-14 | 67.4 |
| MS.gene28923.t1 | AT4G36410 | 35.354 | 99 | 62 | 2 | 36 | 133 | 19 | 116 | 3.88e-14 | 67.0 |
| MS.gene28923.t1 | AT2G32790 | 38.017 | 121 | 72 | 2 | 53 | 173 | 51 | 168 | 4.71e-14 | 67.0 |
| MS.gene28923.t1 | AT3G17000 | 32.743 | 113 | 67 | 3 | 34 | 141 | 13 | 121 | 7.09e-12 | 62.8 |
Find 42 sgRNAs with CRISPR-Local
Find 116 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGACTTTAGGAGCCTTAAA+AGG | 0.184751 | 4.4:+34248181 | None:intergenic |
| TTGTTTGTTTATAGGATAAA+TGG | 0.261888 | 4.4:-34248009 | MS.gene28923:intron |
| CATCCCAATGTTGATCTTCA+TGG | 0.269716 | 4.4:-34248139 | MS.gene28923:CDS |
| GCCTTCAAACACTGTATCTT+TGG | 0.311394 | 4.4:+34248243 | None:intergenic |
| CTGTCCATCCAAAGTCTTCT+TGG | 0.336173 | 4.4:-34247956 | MS.gene28923:CDS |
| TGTCAGATGAGCGGTGATTC+TGG | 0.340319 | 4.4:-34248325 | MS.gene28923:intron |
| GTAGTTTCAAACTTGACTTT+AGG | 0.379535 | 4.4:+34248169 | None:intergenic |
| TTGTGGAAAGGAACAATAAC+AGG | 0.394846 | 4.4:-34248268 | MS.gene28923:CDS |
| ATCCACAAGCAGCACAGCTT+TGG | 0.411990 | 4.4:-34247720 | MS.gene28923:CDS |
| GCCTTAAAAGGGTAATCATT+AGG | 0.415557 | 4.4:+34248193 | None:intergenic |
| TATATGCTTGGACATACTTC+AGG | 0.420859 | 4.4:-34248113 | MS.gene28923:intron |
| AGCATCGGTGTTCCCATTGA+TGG | 0.425940 | 4.4:+34249556 | None:intergenic |
| GTCTGAATTGATGTCTTTGA+TGG | 0.426742 | 4.4:-34248569 | MS.gene28923:intron |
| CTCCAAAGCTGTGCTGCTTG+TGG | 0.432715 | 4.4:+34247718 | None:intergenic |
| ATTCCACCTCTGTTCTCAAA+AGG | 0.440278 | 4.4:-34249478 | MS.gene28923:intron |
| TGTGCTGCTTGTGGATTTAG+TGG | 0.440911 | 4.4:+34247727 | None:intergenic |
| TTTAGTGGTGAACTAATGTT+TGG | 0.452232 | 4.4:+34247742 | None:intergenic |
| GTCTACCTCCAAGAAGACTT+TGG | 0.472732 | 4.4:+34247948 | None:intergenic |
| AAGAATATGTTGTCTTCCTC+AGG | 0.473205 | 4.4:+34248289 | None:intergenic |
| TGACTTTAGGAGCCTTAAAA+GGG | 0.487045 | 4.4:+34248182 | None:intergenic |
| ATCAACATTGGGATGGAAGC+AGG | 0.492019 | 4.4:+34248147 | None:intergenic |
| TTATACAGATTACAGAAAGA+TGG | 0.493470 | 4.4:-34247599 | MS.gene28923:intron |
| TTGCCATGAAGATCAACATT+GGG | 0.507321 | 4.4:+34248136 | None:intergenic |
| TCTTCATGGCAATATATGCT+TGG | 0.513262 | 4.4:-34248125 | MS.gene28923:CDS |
| AACAATGGGTTGAGCAGCAT+CGG | 0.515118 | 4.4:+34249541 | None:intergenic |
| GAGGTGGAATCAACGGACTT+AGG | 0.525977 | 4.4:+34249491 | None:intergenic |
| ATCGACTAAGCAGTAGCACT+TGG | 0.531003 | 4.4:+34247556 | None:intergenic |
| ACCTCCAAGAAGACTTTGGA+TGG | 0.537043 | 4.4:+34247952 | None:intergenic |
| AGATACAGTGTTTGAAGGCA+CGG | 0.542633 | 4.4:-34248239 | MS.gene28923:CDS |
| TCCATCCAAAGTCTTCTTGG+AGG | 0.548893 | 4.4:-34247953 | MS.gene28923:intron |
| ACCAAAGATACAGTGTTTGA+AGG | 0.558474 | 4.4:-34248244 | MS.gene28923:CDS |
| GACAACATATTCTTGTGGAA+AGG | 0.561762 | 4.4:-34248280 | MS.gene28923:CDS |
| ACGGACTTAGGAGGAGGAAG+AGG | 0.570689 | 4.4:+34249503 | None:intergenic |
| GAGAACAGAGGTGGAATCAA+CGG | 0.579252 | 4.4:+34249484 | None:intergenic |
| ATTGCCATGAAGATCAACAT+TGG | 0.588583 | 4.4:+34248135 | None:intergenic |
| GAATCAACGGACTTAGGAGG+AGG | 0.597125 | 4.4:+34249497 | None:intergenic |
| AGGAAGACAACATATTCTTG+TGG | 0.600574 | 4.4:-34248285 | MS.gene28923:CDS |
| GTGGAATCAACGGACTTAGG+AGG | 0.610762 | 4.4:+34249494 | None:intergenic |
| CAGCTTTGGAGCAATCAAGA+AGG | 0.619795 | 4.4:-34247706 | MS.gene28923:intron |
| TACAGATTACAGAAAGATGG+TGG | 0.634223 | 4.4:-34247596 | MS.gene28923:intron |
| CATGAAGATCAACATTGGGA+TGG | 0.643434 | 4.4:+34248140 | None:intergenic |
| TGATTGGACTGTCAGATGAG+CGG | 0.704407 | 4.4:-34248334 | MS.gene28923:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAAAAATGTATAAATAAA+GGG | - | chr4.4:34248093-34248112 | MS.gene28923:intron | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | - | chr4.4:34248092-34248111 | MS.gene28923:intron | 10.0% |
| !! | AATTAGAGTTATATTGTATT+GGG | - | chr4.4:34248158-34248177 | MS.gene28923:CDS | 15.0% |
| !! | ACAAATGACAATAATAATAA+GGG | + | chr4.4:34248448-34248467 | None:intergenic | 15.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | - | chr4.4:34248094-34248113 | MS.gene28923:intron | 15.0% |
| !! | TAAAAAGTTAAAAAAGAGTT+AGG | + | chr4.4:34249351-34249370 | None:intergenic | 15.0% |
| !! | TAAAAGAGAGATTTAATAAT+AGG | + | chr4.4:34247683-34247702 | None:intergenic | 15.0% |
| !! | TAATTAGAGTTATATTGTAT+TGG | - | chr4.4:34248157-34248176 | MS.gene28923:CDS | 15.0% |
| !! | TACAAATGACAATAATAATA+AGG | + | chr4.4:34248449-34248468 | None:intergenic | 15.0% |
| !! | TTATTTGTTTGTTTGTTTAT+AGG | - | chr4.4:34249107-34249126 | MS.gene28923:intron | 15.0% |
| !! | TTGTTTGTTTATAGGATAAA+TGG | - | chr4.4:34249115-34249134 | MS.gene28923:intron | 20.0% |
| !!! | ACACTAATCTAATTTGTATA+CGG | + | chr4.4:34249313-34249332 | None:intergenic | 20.0% |
| !!! | AGACACTTTTTTTTAGAAAA+TGG | - | chr4.4:34248226-34248245 | MS.gene28923:CDS | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | - | chr4.4:34248227-34248246 | MS.gene28923:CDS | 20.0% |
| ! | AAAGTGGAATATATTGTACT+GGG | - | chr4.4:34248117-34248136 | MS.gene28923:CDS | 25.0% |
| ! | GAACAAATGATTGTGATAAA+TGG | - | chr4.4:34247980-34247999 | MS.gene28923:CDS | 25.0% |
| ! | TTATACAGATTACAGAAAGA+TGG | - | chr4.4:34249525-34249544 | MS.gene28923:CDS | 25.0% |
| !!! | TGTTTTGCATTTTTTGTGAT+TGG | - | chr4.4:34248774-34248793 | MS.gene28923:intron | 25.0% |
| ACAAGACTCATAATGATTGA+AGG | + | chr4.4:34249451-34249470 | None:intergenic | 30.0% | |
| AGGTAATGTGAAATCATCTA+AGG | - | chr4.4:34249031-34249050 | MS.gene28923:intron | 30.0% | |
| ATGTTAATGTATGATGTCGT+CGG | + | chr4.4:34247810-34247829 | None:intergenic | 30.0% | |
| CATACATTAACATGATCAGT+GGG | - | chr4.4:34247817-34247836 | MS.gene28923:intron | 30.0% | |
| CATGTATTTAGCTAATAGTG+TGG | - | chr4.4:34248727-34248746 | MS.gene28923:intron | 30.0% | |
| GAAAGTGGAATATATTGTAC+TGG | - | chr4.4:34248116-34248135 | MS.gene28923:CDS | 30.0% | |
| GTAGTTTCAAACTTGACTTT+AGG | + | chr4.4:34248958-34248977 | None:intergenic | 30.0% | |
| TCATACATTAACATGATCAG+TGG | - | chr4.4:34247816-34247835 | MS.gene28923:intron | 30.0% | |
| TCTGAACCTCAACAAAATTA+AGG | + | chr4.4:34248669-34248688 | None:intergenic | 30.0% | |
| TGAAAAAACTAAGCTACACA+AGG | + | chr4.4:34248373-34248392 | None:intergenic | 30.0% | |
| TGTATAAATAAAGGGGAAAG+TGG | - | chr4.4:34248101-34248120 | MS.gene28923:intron | 30.0% | |
| TTTAGTGGTGAACTAATGTT+TGG | + | chr4.4:34249385-34249404 | None:intergenic | 30.0% | |
| ! | AATCATTATGAGTCTTGTGA+TGG | - | chr4.4:34249453-34249472 | MS.gene28923:intron | 30.0% |
| ! | TCCTAATGATTACCCTTTTA+AGG | - | chr4.4:34248930-34248949 | MS.gene28923:intron | 30.0% |
| !! | TAGGAGTACTAGTTAAGAAA+TGG | + | chr4.4:34248410-34248429 | None:intergenic | 30.0% |
| !!! | ATTTGTTGTTGACCTTGTTT+TGG | - | chr4.4:34249069-34249088 | MS.gene28923:intron | 30.0% |
| !!! | CACGTTCATTATTGTTTTTG+AGG | - | chr4.4:34248618-34248637 | MS.gene28923:intron | 30.0% |
| AAGAATATGTTGTCTTCCTC+AGG | + | chr4.4:34248838-34248857 | None:intergenic | 35.0% | |
| ACAATGTGCGAATGTAACTT+TGG | + | chr4.4:34248699-34248718 | None:intergenic | 35.0% | |
| ACCAAAGATACAGTGTTTGA+AGG | - | chr4.4:34248880-34248899 | MS.gene28923:intron | 35.0% | |
| ACTACAAGTGTCTAAGTAAG+TGG | - | chr4.4:34248305-34248324 | MS.gene28923:CDS | 35.0% | |
| AGAAAATGGGTCAGATATTC+CGG | - | chr4.4:34248240-34248259 | MS.gene28923:CDS | 35.0% | |
| AGGAAGACAACATATTCTTG+TGG | - | chr4.4:34248839-34248858 | MS.gene28923:intron | 35.0% | |
| ATCTGTGTGAAAATCCAAAC+TGG | + | chr4.4:34248072-34248091 | None:intergenic | 35.0% | |
| ATGTAGCCGTAACACATAAA+TGG | + | chr4.4:34248335-34248354 | None:intergenic | 35.0% | |
| ATTGCCATGAAGATCAACAT+TGG | + | chr4.4:34248992-34249011 | None:intergenic | 35.0% | |
| CTACAAGTGTCTAAGTAAGT+GGG | - | chr4.4:34248306-34248325 | MS.gene28923:CDS | 35.0% | |
| CTTGTATGCATTCTTAGATG+AGG | - | chr4.4:34247850-34247869 | MS.gene28923:intron | 35.0% | |
| GACAACATATTCTTGTGGAA+AGG | - | chr4.4:34248844-34248863 | MS.gene28923:intron | 35.0% | |
| GCCTTAAAAGGGTAATCATT+AGG | + | chr4.4:34248934-34248953 | None:intergenic | 35.0% | |
| GCTCAACACACAAATCAAAT+TGG | + | chr4.4:34248527-34248546 | None:intergenic | 35.0% | |
| GTCTGAATTGATGTCTTTGA+TGG | - | chr4.4:34248555-34248574 | MS.gene28923:intron | 35.0% | |
| TACAGATTACAGAAAGATGG+TGG | - | chr4.4:34249528-34249547 | MS.gene28923:CDS | 35.0% | |
| TATATGCTTGGACATACTTC+AGG | - | chr4.4:34249011-34249030 | MS.gene28923:intron | 35.0% | |
| TCTTCATGGCAATATATGCT+TGG | - | chr4.4:34248999-34249018 | MS.gene28923:intron | 35.0% | |
| TTGCCATGAAGATCAACATT+GGG | + | chr4.4:34248991-34249010 | None:intergenic | 35.0% | |
| TTGTGGAAAGGAACAATAAC+AGG | - | chr4.4:34248856-34248875 | MS.gene28923:intron | 35.0% | |
| ! | TGACTTTAGGAGCCTTAAAA+GGG | + | chr4.4:34248945-34248964 | None:intergenic | 35.0% |
| ! | TTGACTTTAGGAGCCTTAAA+AGG | + | chr4.4:34248946-34248965 | None:intergenic | 35.0% |
| !! | TGTTCGCTTTTATGTCACTT+TGG | + | chr4.4:34247965-34247984 | None:intergenic | 35.0% |
| !! | TGTTTTGTTGGAGCAACAAT+GGG | + | chr4.4:34247600-34247619 | None:intergenic | 35.0% |
| !! | TTGTTTTGTTGGAGCAACAA+TGG | + | chr4.4:34247601-34247620 | None:intergenic | 35.0% |
| !!! | ACACGTTCTTTGTTTTGTGT+TGG | - | chr4.4:34248500-34248519 | MS.gene28923:intron | 35.0% |
| ACACCTTATACCGTTCATGT+GGG | - | chr4.4:34247923-34247942 | MS.gene28923:intron | 40.0% | |
| ACATGAACGGTATAAGGTGT+CGG | + | chr4.4:34247923-34247942 | None:intergenic | 40.0% | |
| ACTTGTGTGATCCACATCAA+TGG | - | chr4.4:34247873-34247892 | MS.gene28923:intron | 40.0% | |
| AGATACAGTGTTTGAAGGCA+CGG | - | chr4.4:34248885-34248904 | MS.gene28923:intron | 40.0% | |
| ATTAAATACTCCCTTCGTCC+CGG | + | chr4.4:34248262-34248281 | None:intergenic | 40.0% | |
| ATTCCACCTCTGTTCTCAAA+AGG | - | chr4.4:34247646-34247665 | MS.gene28923:intron | 40.0% | |
| CATCCCAATGTTGATCTTCA+TGG | - | chr4.4:34248985-34249004 | MS.gene28923:intron | 40.0% | |
| CATGAAGATCAACATTGGGA+TGG | + | chr4.4:34248987-34249006 | None:intergenic | 40.0% | |
| GAAAATGGGTCAGATATTCC+GGG | - | chr4.4:34248241-34248260 | MS.gene28923:CDS | 40.0% | |
| GCCTTCAAACACTGTATCTT+TGG | + | chr4.4:34248884-34248903 | None:intergenic | 40.0% | |
| GGGCATCCATTTATGTGTTA+CGG | - | chr4.4:34248326-34248345 | MS.gene28923:intron | 40.0% | |
| ! | CAAACTGGCTCAGATAAAAC+GGG | + | chr4.4:34248057-34248076 | None:intergenic | 40.0% |
| ! | CCAAACTGGCTCAGATAAAA+CGG | + | chr4.4:34248058-34248077 | None:intergenic | 40.0% |
| ! | GTGACGCCTTAATTTTGTTG+AGG | - | chr4.4:34248660-34248679 | MS.gene28923:intron | 40.0% |
| !! | AAACCTTTTGAGAACAGAGG+TGG | + | chr4.4:34247652-34247671 | None:intergenic | 40.0% |
| !! | AGGGTTTGCTAACTAGTGTT+AGG | + | chr4.4:34248429-34248448 | None:intergenic | 40.0% |
| !! | GAGAAACCTTTTGAGAACAG+AGG | + | chr4.4:34247655-34247674 | None:intergenic | 40.0% |
| !! | TGGTATATCTGCTTTTCCTG+AGG | - | chr4.4:34248819-34248838 | MS.gene28923:intron | 40.0% |
| !!! | TTGTTGACCTTGTTTTGGCT+TGG | - | chr4.4:34249074-34249093 | MS.gene28923:intron | 40.0% |
| ACCTCCAAGAAGACTTTGGA+TGG | + | chr4.4:34249175-34249194 | None:intergenic | 45.0% | |
| ATCAACATTGGGATGGAAGC+AGG | + | chr4.4:34248980-34248999 | None:intergenic | 45.0% | |
| CAGTATGCCAAGCCAAAACA+AGG | + | chr4.4:34249084-34249103 | None:intergenic | 45.0% | |
| CATGATCAGTGGGTCTTTGT+TGG | - | chr4.4:34247827-34247846 | MS.gene28923:intron | 45.0% | |
| CTGTCCATCCAAAGTCTTCT+TGG | - | chr4.4:34249168-34249187 | MS.gene28923:intron | 45.0% | |
| GACACCTTATACCGTTCATG+TGG | - | chr4.4:34247922-34247941 | MS.gene28923:intron | 45.0% | |
| GAGAACAGAGGTGGAATCAA+CGG | + | chr4.4:34247643-34247662 | None:intergenic | 45.0% | |
| GTCTACCTCCAAGAAGACTT+TGG | + | chr4.4:34249179-34249198 | None:intergenic | 45.0% | |
| TACCGTTCATGTGGGTCATT+CGG | - | chr4.4:34247931-34247950 | MS.gene28923:intron | 45.0% | |
| TCCATCCAAAGTCTTCTTGG+AGG | - | chr4.4:34249171-34249190 | MS.gene28923:intron | 45.0% | |
| TGACCCACATGAACGGTATA+AGG | + | chr4.4:34247929-34247948 | None:intergenic | 45.0% | |
| TGATCCACATCAATGGCACA+CGG | - | chr4.4:34247880-34247899 | MS.gene28923:intron | 45.0% | |
| TGATTGGACTGTCAGATGAG+CGG | - | chr4.4:34248790-34248809 | MS.gene28923:intron | 45.0% | |
| ! | CCGTTTTATCTGAGCCAGTT+TGG | - | chr4.4:34248055-34248074 | MS.gene28923:intron | 45.0% |
| !! | AACAATGGGTTGAGCAGCAT+CGG | + | chr4.4:34247586-34247605 | None:intergenic | 45.0% |
| !! | CAGCTTTGGAGCAATCAAGA+AGG | - | chr4.4:34249418-34249437 | MS.gene28923:intron | 45.0% |
| !! | GGAGGAAGAGGTTGTTTTGT+TGG | + | chr4.4:34247612-34247631 | None:intergenic | 45.0% |
| !! | TGTGCTGCTTGTGGATTTAG+TGG | + | chr4.4:34249400-34249419 | None:intergenic | 45.0% |
| ACCCGAATGACCCACATGAA+CGG | + | chr4.4:34247936-34247955 | None:intergenic | 50.0% | |
| ACCGTTCATGTGGGTCATTC+GGG | - | chr4.4:34247932-34247951 | MS.gene28923:intron | 50.0% | |
| ATCCACAAGCAGCACAGCTT+TGG | - | chr4.4:34249404-34249423 | MS.gene28923:intron | 50.0% | |
| CTCAGATAAAACGGGACGGA+GGG | + | chr4.4:34248049-34248068 | None:intergenic | 50.0% | |
| CTGGCTCAGATAAAACGGGA+CGG | + | chr4.4:34248053-34248072 | None:intergenic | 50.0% | |
| GTCAGATATTCCGGGACGAA+GGG | - | chr4.4:34248249-34248268 | MS.gene28923:CDS | 50.0% | |
| TGTCAGATGAGCGGTGATTC+TGG | - | chr4.4:34248799-34248818 | MS.gene28923:intron | 50.0% | |
| ! | GAATCAACGGACTTAGGAGG+AGG | + | chr4.4:34247630-34247649 | None:intergenic | 50.0% |
| ! | GAGGTGGAATCAACGGACTT+AGG | + | chr4.4:34247636-34247655 | None:intergenic | 50.0% |
| ! | GTGGAATCAACGGACTTAGG+AGG | + | chr4.4:34247633-34247652 | None:intergenic | 50.0% |
| !! | AGCATCGGTGTTCCCATTGA+TGG | + | chr4.4:34247571-34247590 | None:intergenic | 50.0% |
| ACGGACTTAGGAGGAGGAAG+AGG | + | chr4.4:34247624-34247643 | None:intergenic | 55.0% | |
| GCTCAGATAAAACGGGACGG+AGG | + | chr4.4:34248050-34248069 | None:intergenic | 55.0% | |
| GGTCAGATATTCCGGGACGA+AGG | - | chr4.4:34248248-34248267 | MS.gene28923:CDS | 55.0% | |
| ! | GACACCGTGTGCCATTGATG+TGG | + | chr4.4:34247887-34247906 | None:intergenic | 55.0% |
| !! | CTCCAAAGCTGTGCTGCTTG+TGG | + | chr4.4:34249409-34249428 | None:intergenic | 55.0% |
| !! | AAGGTGTCGGTGCACTCTGC+AGG | + | chr4.4:34247910-34247929 | None:intergenic | 60.0% |
| !! | AGGTGTCGGTGCACTCTGCA+GGG | + | chr4.4:34247909-34247928 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 34247561 | 34249585 | 34247561 | ID=MS.gene28923 |
| chr4.4 | mRNA | 34247561 | 34249585 | 34247561 | ID=MS.gene28923.t1;Parent=MS.gene28923 |
| chr4.4 | exon | 34249479 | 34249585 | 34249479 | ID=MS.gene28923.t1.exon1;Parent=MS.gene28923.t1 |
| chr4.4 | CDS | 34249479 | 34249585 | 34249479 | ID=cds.MS.gene28923.t1;Parent=MS.gene28923.t1 |
| chr4.4 | exon | 34248570 | 34248597 | 34248570 | ID=MS.gene28923.t1.exon2;Parent=MS.gene28923.t1 |
| chr4.4 | CDS | 34248570 | 34248597 | 34248570 | ID=cds.MS.gene28923.t1;Parent=MS.gene28923.t1 |
| chr4.4 | exon | 34248114 | 34248341 | 34248114 | ID=MS.gene28923.t1.exon3;Parent=MS.gene28923.t1 |
| chr4.4 | CDS | 34248114 | 34248341 | 34248114 | ID=cds.MS.gene28923.t1;Parent=MS.gene28923.t1 |
| chr4.4 | exon | 34247954 | 34248017 | 34247954 | ID=MS.gene28923.t1.exon4;Parent=MS.gene28923.t1 |
| chr4.4 | CDS | 34247954 | 34248017 | 34247954 | ID=cds.MS.gene28923.t1;Parent=MS.gene28923.t1 |
| chr4.4 | exon | 34247707 | 34247766 | 34247707 | ID=MS.gene28923.t1.exon5;Parent=MS.gene28923.t1 |
| chr4.4 | CDS | 34247707 | 34247766 | 34247707 | ID=cds.MS.gene28923.t1;Parent=MS.gene28923.t1 |
| chr4.4 | exon | 34247561 | 34247613 | 34247561 | ID=MS.gene28923.t1.exon6;Parent=MS.gene28923.t1 |
| chr4.4 | CDS | 34247561 | 34247613 | 34247561 | ID=cds.MS.gene28923.t1;Parent=MS.gene28923.t1 |
| Gene Sequence |
| Protein sequence |
