Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene20056.t1 | AES81832.1 | 98 | 454 | 8 | 1 | 1 | 453 | 1 | 454 | 3.10E-229 | 804.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene20056.t1 | Q9LYW9 | 72.9 | 432 | 112 | 2 | 1 | 428 | 10 | 440 | 9.5e-171 | 601.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene20056.t1 | G7L2R8 | 98.0 | 454 | 8 | 1 | 1 | 453 | 1 | 454 | 2.2e-229 | 804.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050838 | MS.gene20056 | 0.828143 | 1.06E-54 | -1.69E-46 |
MS.gene051120 | MS.gene20056 | 0.803823 | 2.90E-49 | -1.69E-46 |
MS.gene051885 | MS.gene20056 | 0.817281 | 3.58E-52 | -1.69E-46 |
MS.gene052345 | MS.gene20056 | 0.800397 | 1.47E-48 | -1.69E-46 |
MS.gene057094 | MS.gene20056 | 0.813172 | 2.93E-51 | -1.69E-46 |
MS.gene05880 | MS.gene20056 | 0.819755 | 9.83E-53 | -1.69E-46 |
MS.gene06113 | MS.gene20056 | 0.885161 | 1.03E-71 | -1.69E-46 |
MS.gene06117 | MS.gene20056 | 0.930962 | 7.62E-94 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene20056 | MS.gene27507 | PPI |
MS.gene20056 | MS.gene87680 | PPI |
MS.gene022257 | MS.gene20056 | PPI |
MS.gene20056 | MS.gene25914 | PPI |
MS.gene20056 | MS.gene036937 | PPI |
MS.gene20056 | MS.gene51850 | PPI |
MS.gene20056 | MS.gene70587 | PPI |
MS.gene92768 | MS.gene20056 | PPI |
MS.gene20056 | MS.gene074392 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene20056.t1 | MTR_7g101070 | 98.316 | 475 | 7 | 1 | 1 | 474 | 1 | 475 | 0.0 | 944 |
MS.gene20056.t1 | MTR_4g078850 | 47.000 | 100 | 47 | 2 | 358 | 451 | 4 | 103 | 1.32e-20 | 93.2 |
MS.gene20056.t1 | MTR_2g014480 | 50.000 | 96 | 46 | 2 | 358 | 451 | 4 | 99 | 1.77e-20 | 92.8 |
MS.gene20056.t1 | MTR_2g090705 | 44.545 | 110 | 51 | 2 | 358 | 457 | 4 | 113 | 2.03e-20 | 92.4 |
MS.gene20056.t1 | MTR_2g014470 | 47.917 | 96 | 49 | 1 | 358 | 452 | 4 | 99 | 6.31e-20 | 91.3 |
MS.gene20056.t1 | MTR_4g015840 | 55.385 | 65 | 29 | 0 | 358 | 422 | 4 | 68 | 1.07e-18 | 87.4 |
MS.gene20056.t1 | MTR_3g108020 | 53.846 | 65 | 30 | 0 | 358 | 422 | 4 | 68 | 2.42e-18 | 86.3 |
MS.gene20056.t1 | MTR_8g022310 | 48.276 | 87 | 37 | 2 | 354 | 432 | 6 | 92 | 1.41e-17 | 81.6 |
MS.gene20056.t1 | MTR_8g022310 | 48.276 | 87 | 37 | 2 | 354 | 432 | 6 | 92 | 1.84e-17 | 80.9 |
MS.gene20056.t1 | MTR_8g006430 | 54.651 | 86 | 32 | 3 | 359 | 442 | 15 | 95 | 4.02e-17 | 83.6 |
MS.gene20056.t1 | MTR_8g022310 | 48.276 | 87 | 37 | 2 | 354 | 432 | 6 | 92 | 4.94e-17 | 80.9 |
MS.gene20056.t1 | MTR_8g022310 | 48.276 | 87 | 37 | 2 | 354 | 432 | 6 | 92 | 5.89e-17 | 79.7 |
MS.gene20056.t1 | MTR_5g065860 | 52.174 | 69 | 32 | 1 | 353 | 421 | 43 | 110 | 4.47e-16 | 75.5 |
MS.gene20056.t1 | MTR_7g109340 | 62.121 | 66 | 24 | 1 | 357 | 422 | 25 | 89 | 5.20e-16 | 79.7 |
MS.gene20056.t1 | MTR_2g104030 | 51.724 | 87 | 38 | 3 | 358 | 442 | 70 | 154 | 1.25e-15 | 79.7 |
MS.gene20056.t1 | MTR_3g027580 | 59.091 | 66 | 26 | 1 | 357 | 422 | 88 | 152 | 2.56e-15 | 78.2 |
MS.gene20056.t1 | MTR_3g087030 | 55.385 | 65 | 27 | 1 | 358 | 422 | 82 | 144 | 1.10e-14 | 76.3 |
MS.gene20056.t1 | MTR_7g090940 | 23.838 | 495 | 281 | 13 | 27 | 437 | 696 | 1178 | 1.91e-14 | 76.6 |
MS.gene20056.t1 | MTR_7g112360 | 50.000 | 68 | 31 | 1 | 359 | 423 | 17 | 84 | 1.97e-14 | 71.2 |
MS.gene20056.t1 | MTR_7g112360 | 49.333 | 75 | 33 | 2 | 359 | 428 | 17 | 91 | 2.98e-14 | 69.3 |
MS.gene20056.t1 | MTR_1g110310 | 51.515 | 66 | 31 | 1 | 356 | 421 | 14 | 78 | 9.79e-14 | 73.2 |
MS.gene20056.t1 | MTR_4g023470 | 54.545 | 66 | 29 | 1 | 357 | 422 | 85 | 149 | 2.43e-13 | 72.0 |
MS.gene20056.t1 | MTR_5g037880 | 40.000 | 85 | 44 | 1 | 358 | 435 | 5 | 89 | 1.04e-12 | 68.9 |
MS.gene20056.t1 | MTR_7g069480 | 52.941 | 68 | 30 | 1 | 354 | 421 | 23 | 88 | 1.40e-12 | 70.1 |
MS.gene20056.t1 | MTR_3g437850 | 44.444 | 81 | 41 | 2 | 358 | 437 | 2 | 79 | 2.54e-12 | 65.5 |
MS.gene20056.t1 | MTR_6g026940 | 47.059 | 68 | 32 | 1 | 358 | 421 | 2 | 69 | 4.92e-12 | 65.1 |
MS.gene20056.t1 | MTR_2g436560 | 36.792 | 106 | 65 | 1 | 352 | 457 | 98 | 201 | 1.27e-11 | 66.2 |
MS.gene20056.t1 | MTR_5g035770 | 46.970 | 66 | 34 | 1 | 356 | 421 | 23 | 87 | 2.00e-11 | 66.2 |
MS.gene20056.t1 | MTR_4g085070 | 50.000 | 62 | 28 | 1 | 365 | 423 | 19 | 80 | 4.45e-11 | 61.6 |
MS.gene20056.t1 | MTR_2g097690 | 46.154 | 65 | 33 | 1 | 360 | 424 | 77 | 139 | 8.31e-11 | 62.0 |
MS.gene20056.t1 | MTR_3g100330 | 33.088 | 136 | 81 | 4 | 307 | 434 | 11 | 144 | 8.70e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene20056.t1 | AT5G03160 | 73.094 | 446 | 113 | 3 | 1 | 442 | 10 | 452 | 0.0 | 598 |
MS.gene20056.t1 | AT5G25530 | 45.690 | 116 | 54 | 4 | 358 | 464 | 4 | 119 | 1.14e-21 | 96.3 |
MS.gene20056.t1 | AT2G20560 | 45.455 | 99 | 45 | 2 | 358 | 455 | 4 | 94 | 1.68e-19 | 90.1 |
MS.gene20056.t1 | AT5G01390 | 55.385 | 65 | 29 | 0 | 358 | 422 | 4 | 68 | 3.06e-19 | 87.4 |
MS.gene20056.t1 | AT5G25530 | 42.742 | 124 | 54 | 5 | 358 | 464 | 4 | 127 | 3.51e-19 | 89.0 |
MS.gene20056.t1 | AT5G01390 | 55.385 | 65 | 29 | 0 | 358 | 422 | 4 | 68 | 4.12e-19 | 86.7 |
MS.gene20056.t1 | AT5G01390 | 55.385 | 65 | 29 | 0 | 358 | 422 | 4 | 68 | 5.90e-19 | 87.4 |
MS.gene20056.t1 | AT4G28480 | 41.748 | 103 | 49 | 2 | 358 | 452 | 4 | 103 | 7.16e-19 | 87.4 |
MS.gene20056.t1 | AT4G28480 | 41.748 | 103 | 49 | 2 | 358 | 452 | 4 | 103 | 8.56e-19 | 88.2 |
MS.gene20056.t1 | AT3G08910 | 53.846 | 65 | 30 | 0 | 358 | 422 | 4 | 68 | 1.01e-18 | 87.4 |
MS.gene20056.t1 | AT5G01390 | 55.385 | 65 | 29 | 0 | 358 | 422 | 4 | 68 | 1.38e-18 | 87.0 |
MS.gene20056.t1 | AT1G80030 | 47.107 | 121 | 54 | 5 | 346 | 464 | 63 | 175 | 2.86e-17 | 84.7 |
MS.gene20056.t1 | AT1G80030 | 47.107 | 121 | 54 | 5 | 346 | 464 | 63 | 175 | 2.92e-17 | 84.7 |
MS.gene20056.t1 | AT1G80030 | 47.107 | 121 | 54 | 5 | 346 | 464 | 63 | 175 | 2.92e-17 | 84.7 |
MS.gene20056.t1 | AT1G80030 | 47.107 | 121 | 54 | 5 | 346 | 464 | 63 | 175 | 2.92e-17 | 84.7 |
MS.gene20056.t1 | AT2G22360 | 52.326 | 86 | 38 | 2 | 358 | 442 | 86 | 169 | 3.36e-17 | 84.3 |
MS.gene20056.t1 | AT4G39960 | 51.163 | 86 | 39 | 2 | 358 | 442 | 85 | 168 | 5.82e-17 | 83.6 |
MS.gene20056.t1 | AT4G39960 | 51.163 | 86 | 39 | 2 | 358 | 442 | 85 | 168 | 5.82e-17 | 83.6 |
MS.gene20056.t1 | AT1G10350 | 47.692 | 65 | 34 | 0 | 358 | 422 | 4 | 68 | 7.84e-17 | 82.0 |
MS.gene20056.t1 | AT1G59725 | 51.429 | 70 | 32 | 2 | 358 | 425 | 4 | 73 | 2.14e-16 | 80.5 |
MS.gene20056.t1 | AT3G47940 | 53.333 | 75 | 33 | 2 | 358 | 430 | 4 | 78 | 4.78e-16 | 79.7 |
MS.gene20056.t1 | AT1G56300 | 49.296 | 71 | 33 | 1 | 356 | 423 | 11 | 81 | 6.11e-15 | 71.6 |
MS.gene20056.t1 | AT1G56300 | 49.296 | 71 | 33 | 1 | 356 | 423 | 11 | 81 | 8.95e-15 | 72.4 |
MS.gene20056.t1 | AT3G62600 | 54.795 | 73 | 32 | 1 | 350 | 422 | 18 | 89 | 1.46e-14 | 75.5 |
MS.gene20056.t1 | AT5G48030 | 50.633 | 79 | 36 | 2 | 357 | 433 | 93 | 170 | 2.81e-14 | 75.1 |
MS.gene20056.t1 | AT3G17830 | 41.000 | 100 | 48 | 3 | 349 | 442 | 54 | 148 | 3.00e-14 | 75.5 |
MS.gene20056.t1 | AT1G68370 | 46.250 | 80 | 40 | 2 | 354 | 431 | 13 | 91 | 1.67e-13 | 72.8 |
MS.gene20056.t1 | AT1G72416 | 38.554 | 83 | 46 | 2 | 355 | 432 | 2 | 84 | 2.66e-13 | 69.3 |
MS.gene20056.t1 | AT3G14200 | 42.105 | 95 | 46 | 3 | 345 | 432 | 1 | 93 | 2.85e-13 | 69.7 |
MS.gene20056.t1 | AT1G71000 | 47.561 | 82 | 38 | 2 | 356 | 434 | 6 | 85 | 4.06e-13 | 67.8 |
MS.gene20056.t1 | AT1G71000 | 47.561 | 82 | 38 | 2 | 356 | 434 | 6 | 85 | 5.32e-13 | 67.4 |
MS.gene20056.t1 | AT2G41000 | 34.409 | 93 | 55 | 2 | 358 | 446 | 3 | 93 | 6.55e-13 | 68.2 |
MS.gene20056.t1 | AT1G72416 | 38.554 | 83 | 46 | 2 | 355 | 432 | 2 | 84 | 1.03e-12 | 67.0 |
MS.gene20056.t1 | AT1G72416 | 38.554 | 83 | 46 | 2 | 355 | 432 | 2 | 84 | 1.05e-12 | 67.0 |
MS.gene20056.t1 | AT1G72416 | 38.554 | 83 | 46 | 2 | 355 | 432 | 2 | 84 | 1.49e-12 | 66.6 |
MS.gene20056.t1 | AT3G57340 | 29.319 | 191 | 106 | 7 | 274 | 439 | 12 | 198 | 3.09e-12 | 68.6 |
MS.gene20056.t1 | AT3G57340 | 29.319 | 191 | 106 | 7 | 274 | 439 | 12 | 198 | 3.09e-12 | 68.6 |
MS.gene20056.t1 | AT2G41000 | 34.409 | 93 | 55 | 2 | 358 | 446 | 3 | 93 | 3.32e-12 | 65.5 |
MS.gene20056.t1 | AT5G16650 | 51.471 | 68 | 32 | 1 | 354 | 421 | 7 | 73 | 5.01e-12 | 64.7 |
MS.gene20056.t1 | AT5G12430 | 25.105 | 239 | 141 | 4 | 229 | 429 | 876 | 1114 | 7.22e-12 | 68.6 |
MS.gene20056.t1 | AT2G41520 | 28.037 | 214 | 116 | 5 | 251 | 426 | 851 | 1064 | 7.43e-12 | 68.6 |
MS.gene20056.t1 | AT1G59980 | 42.683 | 82 | 37 | 2 | 355 | 427 | 20 | 100 | 8.88e-12 | 67.0 |
MS.gene20056.t1 | AT2G33735 | 46.970 | 66 | 34 | 1 | 357 | 422 | 21 | 85 | 1.00e-11 | 62.4 |
MS.gene20056.t1 | AT2G33735 | 46.970 | 66 | 34 | 1 | 357 | 422 | 21 | 85 | 1.00e-11 | 62.4 |
MS.gene20056.t1 | AT5G16650 | 51.471 | 68 | 32 | 1 | 354 | 421 | 7 | 73 | 1.14e-11 | 62.4 |
MS.gene20056.t1 | AT2G41520 | 28.037 | 214 | 116 | 5 | 251 | 426 | 751 | 964 | 1.30e-11 | 67.8 |
MS.gene20056.t1 | AT1G59980 | 42.683 | 82 | 37 | 2 | 355 | 427 | 20 | 100 | 2.02e-11 | 66.2 |
MS.gene20056.t1 | AT5G05750 | 31.429 | 140 | 59 | 5 | 353 | 457 | 109 | 246 | 3.97e-11 | 64.3 |
MS.gene20056.t1 | AT3G12170 | 38.202 | 89 | 54 | 1 | 354 | 442 | 7 | 94 | 5.43e-11 | 63.5 |
MS.gene20056.t1 | AT5G59610 | 37.895 | 95 | 54 | 3 | 341 | 434 | 55 | 145 | 5.72e-11 | 63.2 |
MS.gene20056.t1 | AT3G12170 | 38.202 | 89 | 54 | 1 | 354 | 442 | 43 | 130 | 7.52e-11 | 63.5 |
MS.gene20056.t1 | AT2G41520 | 29.379 | 177 | 87 | 5 | 288 | 426 | 857 | 1033 | 7.52e-11 | 65.1 |
MS.gene20056.t1 | AT5G06910 | 37.349 | 83 | 51 | 1 | 360 | 442 | 31 | 112 | 9.58e-11 | 63.2 |
Find 108 sgRNAs with CRISPR-Local
Find 339 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAGGATTATTACAAGATTT+TGG | 0.134713 | 7.2:-11198825 | MS.gene20056:CDS |
CAACCCTTTGTTTCTGCTTC+AGG | 0.202001 | 7.2:-11202859 | MS.gene20056:intron |
AAAGCATCTCGAAGTATAAA+AGG | 0.221656 | 7.2:-11201326 | MS.gene20056:CDS |
CTATGGATTCGGTGCCTTAC+AGG | 0.256750 | 7.2:-11202942 | MS.gene20056:CDS |
GGAATGGGTGGCGGCGGCGG+TGG | 0.261593 | 7.2:-11198372 | MS.gene20056:CDS |
TTCCCTGGTGGAGGCTTTCC+CGG | 0.267174 | 7.2:-11198291 | MS.gene20056:CDS |
AGCCAACTTCACAAAATCTT+TGG | 0.269965 | 7.2:-11200569 | MS.gene20056:CDS |
GATCTAGGCGAAGACCTTTC+TGG | 0.287530 | 7.2:+11200079 | None:intergenic |
ATGGGTGGCGGCGGCGGTGG+AGG | 0.326629 | 7.2:-11198369 | MS.gene20056:CDS |
ACTTATTGATGCTCTTGTTC+AGG | 0.335775 | 7.2:-11199692 | MS.gene20056:intron |
CACCCATTCCTGATTCTTCA+AGG | 0.347393 | 7.2:+11198385 | None:intergenic |
CGTATGCAGCAGCGATTTCT+CGG | 0.352911 | 7.2:+11198690 | None:intergenic |
CTCGTTGTTAACTATGGATT+CGG | 0.359454 | 7.2:-11202953 | None:intergenic |
GGCTTTCCCGGTGGCGGCGG+CGG | 0.366054 | 7.2:-11198279 | MS.gene20056:CDS |
TCAGGAATGGGTGGCGGCGG+CGG | 0.371929 | 7.2:-11198375 | MS.gene20056:CDS |
CTTATCCGGGTGCCATTGTA+AGG | 0.399906 | 7.2:+11198748 | None:intergenic |
TTTCCCGGTGGCGGCGGCGG+TGG | 0.402220 | 7.2:-11198276 | MS.gene20056:CDS |
ACATTATGTGCAAGATGGTC+AGG | 0.406282 | 7.2:+11199811 | None:intergenic |
GGCTGAAGATAATGCGAGTA+AGG | 0.407097 | 7.2:-11199884 | MS.gene20056:CDS |
CTAAACTCTTGACGGAAGAC+TGG | 0.409882 | 7.2:-11199453 | MS.gene20056:CDS |
GTTCACTATGCTCAGGATCT+AGG | 0.412241 | 7.2:+11200064 | None:intergenic |
AGCTTCACTACAACTGTTCA+AGG | 0.413274 | 7.2:+11199732 | None:intergenic |
CGGACATTCAATTGCAGAAA+AGG | 0.413425 | 7.2:-11200653 | MS.gene20056:CDS |
GGAAGATGAAAACAATTTAG+AGG | 0.413639 | 7.2:-11200257 | MS.gene20056:CDS |
GCCTGTGTAAAGTGCTAGTC+AGG | 0.413773 | 7.2:-11199774 | MS.gene20056:CDS |
GGGGAGGACCTTGAAGAATC+AGG | 0.418433 | 7.2:-11198393 | MS.gene20056:CDS |
CATAGAGGGACTGAGCTGTT+TGG | 0.420825 | 7.2:+11200596 | None:intergenic |
GAGGGTGCCATTGCTGAGTC+TGG | 0.421230 | 7.2:-11200292 | MS.gene20056:CDS |
GGGCAAGCTACGGGTGGCAG+TGG | 0.421513 | 7.2:-11199863 | MS.gene20056:CDS |
AGGTATGCTTCTGAAAGGTT+TGG | 0.434008 | 7.2:+11201251 | None:intergenic |
GGAGCTCTCTCAGCTATTGC+AGG | 0.434656 | 7.2:-11200632 | MS.gene20056:CDS |
TTCAATCCATTCGGTGGTGG+TGG | 0.445135 | 7.2:-11198345 | MS.gene20056:CDS |
CGGATAAGAATGTTGACAAA+AGG | 0.448605 | 7.2:-11198733 | MS.gene20056:CDS |
ACTTGCGAAGAACTGAAGCC+TGG | 0.451633 | 7.2:+11201225 | None:intergenic |
GGAGGCTTTCCCGGTGGCGG+CGG | 0.460764 | 7.2:-11198282 | MS.gene20056:CDS |
CCACCGGGAAAGCCTCCACC+AGG | 0.461120 | 7.2:+11198288 | None:intergenic |
ATTCTTCAAGGTCCTCCCCT+TGG | 0.461750 | 7.2:+11198397 | None:intergenic |
GATGGTGGCTTCCCTGGTGG+AGG | 0.465504 | 7.2:-11198300 | MS.gene20056:CDS |
GTCTGAAACAATCCCCTGTA+AGG | 0.471459 | 7.2:+11202928 | None:intergenic |
CAGTTCTTCGCAAGTTATGC+AGG | 0.476082 | 7.2:-11201217 | MS.gene20056:intron |
GATATCTGCTAAAGAGTATG+AGG | 0.477248 | 7.2:-11200311 | MS.gene20056:CDS |
TATGGATTCGGTGCCTTACA+GGG | 0.480574 | 7.2:-11202941 | MS.gene20056:CDS |
GAATCAGGAATGGGTGGCGG+CGG | 0.483700 | 7.2:-11198378 | MS.gene20056:CDS |
CAAGCTACGGGTGGCAGTGG+AGG | 0.484614 | 7.2:-11199860 | MS.gene20056:CDS |
GTAACCACCGCCGCCGCCAC+CGG | 0.485366 | 7.2:+11198272 | None:intergenic |
CTGATCATGATGTTGCTACA+AGG | 0.485535 | 7.2:-11200198 | MS.gene20056:intron |
GGTGGAGGCTTTCCCGGTGG+CGG | 0.486071 | 7.2:-11198285 | MS.gene20056:CDS |
CATAATGTACATCTTCATCT+TGG | 0.494888 | 7.2:-11199796 | MS.gene20056:CDS |
TTCAGAAGCATACCTTTCCC+AGG | 0.497787 | 7.2:-11201243 | MS.gene20056:CDS |
GGTGGCAGTGGAGGAATTCA+AGG | 0.501651 | 7.2:-11199851 | MS.gene20056:CDS |
GGTGGAGGTTTCAATCCATT+CGG | 0.510505 | 7.2:-11198354 | MS.gene20056:CDS |
TGAAGTTGGCTGACTCATAG+AGG | 0.510931 | 7.2:+11200581 | None:intergenic |
GTTGTTACCTTAGTGCATGC+TGG | 0.513136 | 7.2:+11200514 | None:intergenic |
GGGAGAAGCTAAACTCTTGA+CGG | 0.513362 | 7.2:-11199461 | MS.gene20056:CDS |
GGTTTCAATCCATTCGGTGG+TGG | 0.522209 | 7.2:-11198348 | MS.gene20056:CDS |
GACCTTGAAGAATCAGGAAT+GGG | 0.528456 | 7.2:-11198387 | MS.gene20056:CDS |
TAACCACCGCCGCCGCCACC+GGG | 0.533943 | 7.2:+11198273 | None:intergenic |
AGGGTTGAATAATGACAAGT+TGG | 0.541100 | 7.2:+11202875 | None:intergenic |
AAGCATCTCGAAGTATAAAA+GGG | 0.546866 | 7.2:-11201325 | MS.gene20056:CDS |
GGATAAGAATGTTGACAAAA+GGG | 0.547327 | 7.2:-11198732 | MS.gene20056:CDS |
TTTCTCTCCAGCATGCACTA+AGG | 0.557072 | 7.2:-11200521 | MS.gene20056:intron |
GGACCTTGAAGAATCAGGAA+TGG | 0.557178 | 7.2:-11198388 | MS.gene20056:CDS |
ATGCGAGTAAGGGCAAGCTA+CGG | 0.560599 | 7.2:-11199873 | MS.gene20056:CDS |
TGCGAGTAAGGGCAAGCTAC+GGG | 0.563487 | 7.2:-11199872 | MS.gene20056:CDS |
TGTAAAGTGCTAGTCAGGCT+TGG | 0.567833 | 7.2:-11199769 | MS.gene20056:CDS |
ATATTCAGGCATTACCAGAA+AGG | 0.568306 | 7.2:-11200093 | MS.gene20056:intron |
CTTGCGAAGAACTGAAGCCT+GGG | 0.570619 | 7.2:+11201226 | None:intergenic |
TGCTGTCCACCACCACCGAA+TGG | 0.571837 | 7.2:+11198339 | None:intergenic |
TTTAAAGATCAGCAAACGCA+AGG | 0.572466 | 7.2:-11198843 | MS.gene20056:CDS |
AGGCTAAGCTTCTTAAAGTG+AGG | 0.576851 | 7.2:-11200339 | MS.gene20056:CDS |
AGAAATCGCTGCTGCATACG+AGG | 0.583278 | 7.2:-11198687 | MS.gene20056:intron |
TAAACTCTTGACGGAAGACT+GGG | 0.583293 | 7.2:-11199452 | MS.gene20056:CDS |
GAAGAATCAGGAATGGGTGG+CGG | 0.587103 | 7.2:-11198381 | MS.gene20056:CDS |
GTGCTAGTCAGGCTTGGCAG+AGG | 0.590572 | 7.2:-11199763 | MS.gene20056:CDS |
TATACCTGAAGCAGAAACAA+AGG | 0.591247 | 7.2:+11202855 | None:intergenic |
AAGTTTCTGGAGTTAAAACC+CGG | 0.592058 | 7.2:-11200673 | MS.gene20056:CDS |
TTTGATGGTGGCTTCCCTGG+TGG | 0.596620 | 7.2:-11198303 | MS.gene20056:CDS |
ATACCTGAAGCAGAAACAAA+GGG | 0.600717 | 7.2:+11202856 | None:intergenic |
GAAGAACTGAAGCCTGGGAA+AGG | 0.605583 | 7.2:+11201231 | None:intergenic |
GGAGGTTTCAATCCATTCGG+TGG | 0.610043 | 7.2:-11198351 | MS.gene20056:CDS |
CATTATGTGCAAGATGGTCA+GGG | 0.612509 | 7.2:+11199812 | None:intergenic |
ACAAGAAACTTGCCTTACAA+TGG | 0.614939 | 7.2:-11198760 | MS.gene20056:CDS |
ATATTCGTGAAGCATTAATG+AGG | 0.615631 | 7.2:-11198877 | MS.gene20056:CDS |
GCTGAAGATAATGCGAGTAA+GGG | 0.618327 | 7.2:-11199883 | MS.gene20056:CDS |
CTTGAAGAATCAGGAATGGG+TGG | 0.620295 | 7.2:-11198384 | MS.gene20056:CDS |
GGGAAAGGTATGCTTCTGAA+AGG | 0.621313 | 7.2:+11201246 | None:intergenic |
TATTCGTGAAGCATTAATGA+GGG | 0.627259 | 7.2:-11198876 | MS.gene20056:CDS |
CCTGGTGGAGGCTTTCCCGG+TGG | 0.627865 | 7.2:-11198288 | MS.gene20056:CDS |
AACGCACAAGATACGACCAA+GGG | 0.630643 | 7.2:-11198413 | MS.gene20056:CDS |
TGACAAAAGGGAAGAAGCAG+AGG | 0.631426 | 7.2:-11198720 | MS.gene20056:CDS |
GCCTGACTAGCACTTTACAC+AGG | 0.631954 | 7.2:+11199773 | None:intergenic |
ATGGATTCGGTGCCTTACAG+GGG | 0.639407 | 7.2:-11202940 | MS.gene20056:CDS |
GAAGTTGGCTGACTCATAGA+GGG | 0.643770 | 7.2:+11200582 | None:intergenic |
GATGTACATTATGTGCAAGA+TGG | 0.649387 | 7.2:+11199806 | None:intergenic |
CTCTTGACGGAAGACTGGGA+GGG | 0.651624 | 7.2:-11199448 | MS.gene20056:CDS |
ACTCTTGACGGAAGACTGGG+AGG | 0.654965 | 7.2:-11199449 | MS.gene20056:CDS |
AAACGCACAAGATACGACCA+AGG | 0.660195 | 7.2:-11198414 | MS.gene20056:CDS |
ACTTGCCTTACAATGGCACC+CGG | 0.661475 | 7.2:-11198753 | MS.gene20056:CDS |
ATATCTGCTAAAGAGTATGA+GGG | 0.662613 | 7.2:-11200310 | MS.gene20056:CDS |
AAGAAAACCAGACTCAGCAA+TGG | 0.664979 | 7.2:+11200285 | None:intergenic |
CACCGGGAAAGCCTCCACCA+GGG | 0.665138 | 7.2:+11198289 | None:intergenic |
CACAAGATACGACCAAGGGG+AGG | 0.668043 | 7.2:-11198409 | MS.gene20056:CDS |
GAGTAAGGGCAAGCTACGGG+TGG | 0.668740 | 7.2:-11199869 | MS.gene20056:CDS |
TTAGAGGCATTGTTGTTACG+TGG | 0.670478 | 7.2:-11200241 | MS.gene20056:CDS |
AAAAGGGAAACATTATACTG+AGG | 0.693246 | 7.2:-11201309 | MS.gene20056:CDS |
TGAAGCTCTTAAGATCGATG+AGG | 0.710564 | 7.2:-11199716 | MS.gene20056:CDS |
ACGCACAAGATACGACCAAG+GGG | 0.726879 | 7.2:-11198412 | MS.gene20056:CDS |
GTAGATATGAGCAATCTGAG+AGG | 0.737942 | 7.2:-11200705 | MS.gene20056:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAAAAATAAATGGT+TGG | + | chr7.2:11198381-11198400 | None:intergenic | 10.0% |
!! | AAATAAACATTAAATCAAAA+TGG | + | chr7.2:11198420-11198439 | None:intergenic | 10.0% |
!! | AATAAACATTAAATCAAAAT+GGG | + | chr7.2:11198419-11198438 | None:intergenic | 10.0% |
!! | TAAAGATATGAAATTTAATA+GGG | + | chr7.2:11198452-11198471 | None:intergenic | 10.0% |
!! | TTAAAGATATGAAATTTAAT+AGG | + | chr7.2:11198453-11198472 | None:intergenic | 10.0% |
!!! | AAATTATGTGTTTATTTTAA+AGG | - | chr7.2:11198556-11198575 | MS.gene20056:intron | 10.0% |
!!! | ATATGATAATGTTAATATTT+TGG | - | chr7.2:11202257-11202276 | MS.gene20056:intron | 10.0% |
!!! | ATGATTAAATTTTAGAATAT+TGG | - | chr7.2:11201854-11201873 | MS.gene20056:intron | 10.0% |
!!! | ATTTTATAGCTTTTATTTTT+TGG | - | chr7.2:11198709-11198728 | MS.gene20056:CDS | 10.0% |
!!! | TTTTATAGCTTTTATTTTTT+GGG | - | chr7.2:11198710-11198729 | MS.gene20056:CDS | 10.0% |
!! | AAACTAATATCTTAAAGTAT+AGG | + | chr7.2:11200346-11200365 | None:intergenic | 15.0% |
!! | AAAGATATGAAATTTAATAG+GGG | + | chr7.2:11198451-11198470 | None:intergenic | 15.0% |
!! | AAATATAATCTAATTCAAAC+AGG | - | chr7.2:11199629-11199648 | MS.gene20056:intron | 15.0% |
!! | AATATTTGCAATAAAACTTT+AGG | - | chr7.2:11202192-11202211 | MS.gene20056:intron | 15.0% |
!! | AGGATAATATTAGAAAAAAT+TGG | + | chr7.2:11201066-11201085 | None:intergenic | 15.0% |
!! | ATAAACATTAAATCAAAATG+GGG | + | chr7.2:11198418-11198437 | None:intergenic | 15.0% |
!! | CATTTATCATAAAATGAAAA+GGG | - | chr7.2:11199241-11199260 | MS.gene20056:intron | 15.0% |
!!! | ATGAATATTTTGTTGAATAA+CGG | - | chr7.2:11202722-11202741 | MS.gene20056:intron | 15.0% |
!! | AATGCAAGAAATAAATAACA+AGG | + | chr7.2:11201947-11201966 | None:intergenic | 20.0% |
!! | AATTCAATATATATTACCTG+AGG | + | chr7.2:11201812-11201831 | None:intergenic | 20.0% |
!! | AGAAATTTGAACAATATATC+AGG | + | chr7.2:11201215-11201234 | None:intergenic | 20.0% |
!! | AGGAATAGAAAGTAAATTTA+TGG | + | chr7.2:11200726-11200745 | None:intergenic | 20.0% |
!! | ATCTTAAAGTATAGGATTTA+TGG | + | chr7.2:11200338-11200357 | None:intergenic | 20.0% |
!! | CACTTCTAATAAAAGATATA+TGG | + | chr7.2:11199375-11199394 | None:intergenic | 20.0% |
!! | CCATTTATCATAAAATGAAA+AGG | - | chr7.2:11199240-11199259 | MS.gene20056:intron | 20.0% |
!! | GAAAATAATGCATATAAAGT+TGG | + | chr7.2:11200835-11200854 | None:intergenic | 20.0% |
!! | GAAATTTGAACAATATATCA+GGG | + | chr7.2:11201214-11201233 | None:intergenic | 20.0% |
!! | GGTATATAGTATAGTATATA+AGG | - | chr7.2:11199500-11199519 | MS.gene20056:intron | 20.0% |
!! | TAGTTATAGAATTAGTAAAG+TGG | + | chr7.2:11199060-11199079 | None:intergenic | 20.0% |
!! | TCAACAAAATATTCATATCT+AGG | + | chr7.2:11202718-11202737 | None:intergenic | 20.0% |
!! | TCTTAAAGTATAGGATTTAT+GGG | + | chr7.2:11200337-11200356 | None:intergenic | 20.0% |
!!! | AAAATCACAAGTTTTTTTCT+GGG | - | chr7.2:11201579-11201598 | MS.gene20056:intron | 20.0% |
!!! | AATTTTGCCAAAAGTTTTTA+AGG | + | chr7.2:11199576-11199595 | None:intergenic | 20.0% |
!!! | ACAAATTCAGAGTTTATTTT+TGG | + | chr7.2:11198834-11198853 | None:intergenic | 20.0% |
!!! | ATTTTGCCAAAAGTTTTTAA+GGG | + | chr7.2:11199575-11199594 | None:intergenic | 20.0% |
!!! | CAAAAAAGAAATTTTTTGCT+AGG | + | chr7.2:11201609-11201628 | None:intergenic | 20.0% |
!!! | CAAATTCAGAGTTTATTTTT+GGG | + | chr7.2:11198833-11198852 | None:intergenic | 20.0% |
!!! | CCTTTTCATTTTATGATAAA+TGG | + | chr7.2:11199243-11199262 | None:intergenic | 20.0% |
!!! | TATTATATACCATGCTTTTT+TGG | - | chr7.2:11202614-11202633 | MS.gene20056:intron | 20.0% |
!!! | TATTTCTTTGTTTTCCATAA+AGG | - | chr7.2:11201292-11201311 | MS.gene20056:CDS | 20.0% |
!!! | TGAATATTTTGTTGAATAAC+GGG | - | chr7.2:11202723-11202742 | MS.gene20056:intron | 20.0% |
!!! | TTATATGCATTATTTTCTTC+AGG | - | chr7.2:11200838-11200857 | MS.gene20056:intron | 20.0% |
!!! | TTTTCATCATTCTTTCTTTT+GGG | - | chr7.2:11201255-11201274 | MS.gene20056:CDS | 20.0% |
!!! | TTTTTCATCATTCTTTCTTT+TGG | - | chr7.2:11201254-11201273 | MS.gene20056:CDS | 20.0% |
! | AAAAGAAAAAGAAAACTACC+AGG | + | chr7.2:11202096-11202115 | None:intergenic | 25.0% |
! | AAAGTTAATGCCTAAGTATT+GGG | - | chr7.2:11200769-11200788 | MS.gene20056:intron | 25.0% |
! | AAATACTGTATTTCGTTGAT+AGG | - | chr7.2:11199295-11199314 | MS.gene20056:intron | 25.0% |
! | AAGTAATAAAGTTAGGACTT+GGG | + | chr7.2:11199736-11199755 | None:intergenic | 25.0% |
! | AAGTATAGTGTTCACATTAT+TGG | + | chr7.2:11200188-11200207 | None:intergenic | 25.0% |
! | AATATTATCCTGCTTATATG+TGG | - | chr7.2:11201075-11201094 | MS.gene20056:intron | 25.0% |
! | AATGATATCACTATCCAATT+AGG | + | chr7.2:11200453-11200472 | None:intergenic | 25.0% |
! | AATGGTATATAGAAAGAGTT+AGG | - | chr7.2:11198805-11198824 | MS.gene20056:CDS | 25.0% |
! | ACAACACAAATAAAAACCTA+AGG | + | chr7.2:11198535-11198554 | None:intergenic | 25.0% |
! | AGAAAGTAAATTTATGGATG+TGG | + | chr7.2:11200720-11200739 | None:intergenic | 25.0% |
! | ATATTATCCTGCTTATATGT+GGG | - | chr7.2:11201076-11201095 | MS.gene20056:intron | 25.0% |
! | CTTAAAGTATAGGATTTATG+GGG | + | chr7.2:11200336-11200355 | None:intergenic | 25.0% |
! | GAGTTATAATAGGATTCATT+TGG | - | chr7.2:11202687-11202706 | MS.gene20056:intron | 25.0% |
! | TAAACCATAGCATAAAACAA+CGG | + | chr7.2:11199178-11199197 | None:intergenic | 25.0% |
! | TATAGTGCAATTAACAAACT+TGG | + | chr7.2:11199476-11199495 | None:intergenic | 25.0% |
! | TATATTAGAAAATACCTGCA+CGG | - | chr7.2:11202136-11202155 | MS.gene20056:intron | 25.0% |
! | TATCAACGAAATACAGTATT+TGG | + | chr7.2:11199296-11199315 | None:intergenic | 25.0% |
! | TATCCTTATGAAACAGAAAT+TGG | + | chr7.2:11200092-11200111 | None:intergenic | 25.0% |
! | TCTAGAGAAGTAATAAAGTT+AGG | + | chr7.2:11199743-11199762 | None:intergenic | 25.0% |
! | TGTAGTTTGAATTTGAACAT+TGG | - | chr7.2:11198747-11198766 | MS.gene20056:CDS | 25.0% |
! | TTAAAGTATAGGATTTATGG+GGG | + | chr7.2:11200335-11200354 | None:intergenic | 25.0% |
! | TTGCACATAATTACTTATCT+TGG | - | chr7.2:11201696-11201715 | MS.gene20056:intron | 25.0% |
! | TTGTTAATTGCACTATATTG+TGG | - | chr7.2:11199479-11199498 | MS.gene20056:intron | 25.0% |
! | TTTCCAATTTCTGTTTCATA+AGG | - | chr7.2:11200086-11200105 | MS.gene20056:CDS | 25.0% |
! | TTTCTATATACCATTCAAAC+AGG | + | chr7.2:11198800-11198819 | None:intergenic | 25.0% |
!! | CAAGGATTATTACAAGATTT+TGG | - | chr7.2:11202372-11202391 | MS.gene20056:intron | 25.0% |
!! | TAGTATATAAGGTCTTGTAT+TGG | - | chr7.2:11199511-11199530 | MS.gene20056:intron | 25.0% |
!!! | AAAAGAAATTTTTTGCTAGG+AGG | + | chr7.2:11201606-11201625 | None:intergenic | 25.0% |
!!! | AAAGAAATTTTTTGCTAGGA+GGG | + | chr7.2:11201605-11201624 | None:intergenic | 25.0% |
!!! | CAAAATCACAAGTTTTTTTC+TGG | - | chr7.2:11201578-11201597 | MS.gene20056:intron | 25.0% |
!!! | CAATTTCACTTTACTTTTGA+TGG | - | chr7.2:11202879-11202898 | MS.gene20056:CDS | 25.0% |
!!! | TGGGAGTATTATTTTTTAGT+GGG | + | chr7.2:11199717-11199736 | None:intergenic | 25.0% |
!!! | TTGGGAGTATTATTTTTTAG+TGG | + | chr7.2:11199718-11199737 | None:intergenic | 25.0% |
!!! | TTTTGCCAAAAGTTTTTAAG+GGG | + | chr7.2:11199574-11199593 | None:intergenic | 25.0% |
AAAAGGGAAACATTATACTG+AGG | - | chr7.2:11199888-11199907 | MS.gene20056:intron | 30.0% | |
AAATCACTCAAACTCCTAAT+TGG | - | chr7.2:11200436-11200455 | MS.gene20056:intron | 30.0% | |
AAATGGTTGGAAAGAAATGA+AGG | + | chr7.2:11198368-11198387 | None:intergenic | 30.0% | |
AAGCATCTCGAAGTATAAAA+GGG | - | chr7.2:11199872-11199891 | MS.gene20056:CDS | 30.0% | |
AATCTCATATGATGTCATTG+TGG | + | chr7.2:11199123-11199142 | None:intergenic | 30.0% | |
AATTAGGAGTTTGAGTGATT+TGG | + | chr7.2:11200437-11200456 | None:intergenic | 30.0% | |
ACTTGTGTAATTGCTAATAC+AGG | + | chr7.2:11200746-11200765 | None:intergenic | 30.0% | |
ATATGTGGGCATATATATTC+AGG | - | chr7.2:11201090-11201109 | MS.gene20056:intron | 30.0% | |
ATTAGGAGTTTGAGTGATTT+GGG | + | chr7.2:11200436-11200455 | None:intergenic | 30.0% | |
ATTGGATAGTGATATCATTC+AGG | - | chr7.2:11200454-11200473 | MS.gene20056:intron | 30.0% | |
CATAATGTACATCTTCATCT+TGG | - | chr7.2:11201401-11201420 | MS.gene20056:intron | 30.0% | |
CTAACTTCAATAACGATAAG+GGG | + | chr7.2:11200165-11200184 | None:intergenic | 30.0% | |
CTGAACAAGGAAAAGAAATA+AGG | + | chr7.2:11202556-11202575 | None:intergenic | 30.0% | |
GAAAGTTAATGCCTAAGTAT+TGG | - | chr7.2:11200768-11200787 | MS.gene20056:intron | 30.0% | |
GAAGTAATAAAGTTAGGACT+TGG | + | chr7.2:11199737-11199756 | None:intergenic | 30.0% | |
GAATGATGAAAAACTTGAGA+AGG | + | chr7.2:11201247-11201266 | None:intergenic | 30.0% | |
GCTAACTTCAATAACGATAA+GGG | + | chr7.2:11200166-11200185 | None:intergenic | 30.0% | |
GGAAGATGAAAACAATTTAG+AGG | - | chr7.2:11200940-11200959 | MS.gene20056:intron | 30.0% | |
GGATAAGAATGTTGACAAAA+GGG | - | chr7.2:11202465-11202484 | MS.gene20056:intron | 30.0% | |
TAAAGTATAGGATTTATGGG+GGG | + | chr7.2:11200334-11200353 | None:intergenic | 30.0% | |
TAATTCAGAATTGTCTGTTG+TGG | - | chr7.2:11201990-11202009 | MS.gene20056:intron | 30.0% | |
TACCAAACTTTCAAAAAGCA+CGG | + | chr7.2:11200036-11200055 | None:intergenic | 30.0% | |
TGAATTGGTTGGATTTATTG+AGG | - | chr7.2:11198686-11198705 | MS.gene20056:intron | 30.0% | |
TGCATTTGTGTGTTAATTAG+AGG | - | chr7.2:11201961-11201980 | MS.gene20056:intron | 30.0% | |
TTCATATAGCATGTTTCACA+CGG | - | chr7.2:11201830-11201849 | MS.gene20056:intron | 30.0% | |
TTGTGTGTTAATTAGAGGTT+TGG | - | chr7.2:11201966-11201985 | MS.gene20056:intron | 30.0% | |
TTTAGTATGACCTGTTTGAA+TGG | - | chr7.2:11198787-11198806 | MS.gene20056:CDS | 30.0% | |
! | AAAGCATCTCGAAGTATAAA+AGG | - | chr7.2:11199871-11199890 | MS.gene20056:CDS | 30.0% |
! | ATATCTGCTAAAGAGTATGA+GGG | - | chr7.2:11200887-11200906 | MS.gene20056:intron | 30.0% |
! | ATATTCGTGAAGCATTAATG+AGG | - | chr7.2:11202320-11202339 | MS.gene20056:intron | 30.0% |
! | ATCGCTACTAAGTGAAATTT+TGG | - | chr7.2:11199423-11199442 | MS.gene20056:CDS | 30.0% |
! | CTTTTGTCAACATTCTTATC+CGG | + | chr7.2:11202466-11202485 | None:intergenic | 30.0% |
! | GAACTGAAAAAAGCATACTT+TGG | - | chr7.2:11201152-11201171 | MS.gene20056:intron | 30.0% |
! | TATTCGTGAAGCATTAATGA+GGG | - | chr7.2:11202321-11202340 | MS.gene20056:intron | 30.0% |
! | TATTTCGTTGATAGGCATTA+TGG | - | chr7.2:11199303-11199322 | MS.gene20056:intron | 30.0% |
! | TTCCAAAGATTTTGTGAAGT+TGG | + | chr7.2:11200633-11200652 | None:intergenic | 30.0% |
! | TTTTGTCAACATTCTTATCC+GGG | + | chr7.2:11202465-11202484 | None:intergenic | 30.0% |
!! | AGTTTGTTAGCTAAGATAGT+AGG | + | chr7.2:11199000-11199019 | None:intergenic | 30.0% |
!! | TGAATAAACTTGCTGTTAAG+AGG | + | chr7.2:11199600-11199619 | None:intergenic | 30.0% |
!! | TTTCACTTTACTTTTGATGG+TGG | - | chr7.2:11202882-11202901 | MS.gene20056:CDS | 30.0% |
!! | TTTTCCGTTGTTTTATGCTA+TGG | - | chr7.2:11199171-11199190 | MS.gene20056:intron | 30.0% |
!!! | TTGATCCAACTTTGTTTTGT+GGG | - | chr7.2:11198477-11198496 | MS.gene20056:intron | 30.0% |
!!! | TTTGATCCAACTTTGTTTTG+TGG | - | chr7.2:11198476-11198495 | MS.gene20056:intron | 30.0% |
AAGCACTAGCTCATTTGTAA+AGG | + | chr7.2:11198931-11198950 | None:intergenic | 35.0% | |
AAGTGGCATCACATAATAGT+GGG | - | chr7.2:11199265-11199284 | MS.gene20056:intron | 35.0% | |
AATCTATTATGCGATACTCC+TGG | - | chr7.2:11199020-11199039 | MS.gene20056:intron | 35.0% | |
ACAAGAAACTTGCCTTACAA+TGG | - | chr7.2:11202437-11202456 | MS.gene20056:intron | 35.0% | |
ACTTATTGATGCTCTTGTTC+AGG | - | chr7.2:11201505-11201524 | MS.gene20056:intron | 35.0% | |
AGATCAGAACCAAAAAAGAC+TGG | + | chr7.2:11199815-11199834 | None:intergenic | 35.0% | |
AGCACTAGCTCATTTGTAAA+GGG | + | chr7.2:11198930-11198949 | None:intergenic | 35.0% | |
AGCCAACTTCACAAAATCTT+TGG | - | chr7.2:11200628-11200647 | MS.gene20056:CDS | 35.0% | |
AGGGTTGAATAATGACAAGT+TGG | + | chr7.2:11198325-11198344 | None:intergenic | 35.0% | |
ATACCTGAAGCAGAAACAAA+GGG | + | chr7.2:11198344-11198363 | None:intergenic | 35.0% | |
ATATATGCCCACATATAAGC+AGG | + | chr7.2:11201086-11201105 | None:intergenic | 35.0% | |
ATATTCAGGCATTACCAGAA+AGG | - | chr7.2:11201104-11201123 | MS.gene20056:intron | 35.0% | |
ATCTATTATGCGATACTCCT+GGG | - | chr7.2:11199021-11199040 | MS.gene20056:intron | 35.0% | |
ATTAATGCATTCCAGGAGAT+CGG | + | chr7.2:11199150-11199169 | None:intergenic | 35.0% | |
CAAAACTAGCCAAAAAAGCA+TGG | + | chr7.2:11202626-11202645 | None:intergenic | 35.0% | |
CAAATTCGAAAAGCTTCAAG+GGG | + | chr7.2:11202046-11202065 | None:intergenic | 35.0% | |
CATAAAATGAAAAGGGCAAG+TGG | - | chr7.2:11199248-11199267 | MS.gene20056:intron | 35.0% | |
CATATGAAACACAAGACACA+AGG | + | chr7.2:11201551-11201570 | None:intergenic | 35.0% | |
CGGATAAGAATGTTGACAAA+AGG | - | chr7.2:11202464-11202483 | MS.gene20056:intron | 35.0% | |
CTTAACTGCGGAGTTATAAT+AGG | - | chr7.2:11202677-11202696 | MS.gene20056:intron | 35.0% | |
GATGTACATTATGTGCAAGA+TGG | + | chr7.2:11201394-11201413 | None:intergenic | 35.0% | |
GCAAATTCGAAAAGCTTCAA+GGG | + | chr7.2:11202047-11202066 | None:intergenic | 35.0% | |
GGAAAACATTAATGCATTCC+AGG | + | chr7.2:11199157-11199176 | None:intergenic | 35.0% | |
GGCTAACTTCAATAACGATA+AGG | + | chr7.2:11200167-11200186 | None:intergenic | 35.0% | |
GTGATGATTCAGTGTTAAAG+TGG | - | chr7.2:11199775-11199794 | MS.gene20056:CDS | 35.0% | |
TAGTAGTTGTCTATAACTGC+AGG | - | chr7.2:11202291-11202310 | MS.gene20056:intron | 35.0% | |
TATACCTGAAGCAGAAACAA+AGG | + | chr7.2:11198345-11198364 | None:intergenic | 35.0% | |
TCCTGATTAAAGTCTGAACA+AGG | + | chr7.2:11202569-11202588 | None:intergenic | 35.0% | |
TCCTTGTTCAGACTTTAATC+AGG | - | chr7.2:11202565-11202584 | MS.gene20056:intron | 35.0% | |
TGTTAGCTAAGATAGTAGGA+GGG | + | chr7.2:11198996-11199015 | None:intergenic | 35.0% | |
TTAGGAGTTTGAGTGATTTG+GGG | + | chr7.2:11200435-11200454 | None:intergenic | 35.0% | |
TTGTCTTGTGGAAATGATGT+TGG | - | chr7.2:11201023-11201042 | MS.gene20056:intron | 35.0% | |
TTGTTAGCTAAGATAGTAGG+AGG | + | chr7.2:11198997-11199016 | None:intergenic | 35.0% | |
TTTAAAGATCAGCAAACGCA+AGG | - | chr7.2:11202354-11202373 | MS.gene20056:intron | 35.0% | |
! | ACCAAACTTTCAAAAAGCAC+GGG | + | chr7.2:11200035-11200054 | None:intergenic | 35.0% |
! | ATGACAGAACTCTAGTTTCA+AGG | - | chr7.2:11198896-11198915 | MS.gene20056:intron | 35.0% |
! | CTTTTCTGCAATTGAATGTC+CGG | + | chr7.2:11200546-11200565 | None:intergenic | 35.0% |
! | GATATCATTCAGGTGCTTTT+TGG | - | chr7.2:11200464-11200483 | MS.gene20056:intron | 35.0% |
! | GATATCTGCTAAAGAGTATG+AGG | - | chr7.2:11200886-11200905 | MS.gene20056:intron | 35.0% |
! | TTTTCTGCAATTGAATGTCC+GGG | + | chr7.2:11200545-11200564 | None:intergenic | 35.0% |
!! | AAGTTTCTGGAGTTAAAACC+CGG | - | chr7.2:11200524-11200543 | MS.gene20056:CDS | 35.0% |
!! | AATGCCTAAGTATTGGGTTT+GGG | - | chr7.2:11200775-11200794 | MS.gene20056:intron | 35.0% |
!! | GATCTAAGTCTTGTTTGAGT+AGG | - | chr7.2:11201628-11201647 | MS.gene20056:intron | 35.0% |
!! | TAAGTCTTGTTTGAGTAGGA+TGG | - | chr7.2:11201632-11201651 | MS.gene20056:intron | 35.0% |
!! | TAATGCCTAAGTATTGGGTT+TGG | - | chr7.2:11200774-11200793 | MS.gene20056:intron | 35.0% |
!! | TTTTAATGGACGCTTAACTG+CGG | - | chr7.2:11202665-11202684 | MS.gene20056:intron | 35.0% |
!! | TTTTTCAGTTCACTATGCTC+AGG | + | chr7.2:11201143-11201162 | None:intergenic | 35.0% |
!!! | AGTCTTTTTTGGTTCTGATC+TGG | - | chr7.2:11199814-11199833 | MS.gene20056:CDS | 35.0% |
!!! | CATGCTTTTTTGGCTAGTTT+TGG | - | chr7.2:11202624-11202643 | MS.gene20056:intron | 35.0% |
!!! | TCTTTTGGGTGTTGATGATT+CGG | - | chr7.2:11201269-11201288 | MS.gene20056:CDS | 35.0% |
AAGAAAACCAGACTCAGCAA+TGG | + | chr7.2:11200915-11200934 | None:intergenic | 40.0% | |
AATGACAATGTTAACCGTGC+AGG | + | chr7.2:11202153-11202172 | None:intergenic | 40.0% | |
ACATTATGTGCAAGATGGTC+AGG | + | chr7.2:11201389-11201408 | None:intergenic | 40.0% | |
ACATTGGAAACTAGAGAGAG+AGG | - | chr7.2:11198763-11198782 | MS.gene20056:CDS | 40.0% | |
ACGTATGCAAGATCGACTAA+TGG | + | chr7.2:11199215-11199234 | None:intergenic | 40.0% | |
AGCATGTTGCATGAATTGGT+TGG | - | chr7.2:11198675-11198694 | MS.gene20056:intron | 40.0% | |
AGCTTCACTACAACTGTTCA+AGG | + | chr7.2:11201468-11201487 | None:intergenic | 40.0% | |
AGGCTAAGCTTCTTAAAGTG+AGG | - | chr7.2:11200858-11200877 | MS.gene20056:intron | 40.0% | |
ATCGACCCACAAAACAAAGT+TGG | + | chr7.2:11198485-11198504 | None:intergenic | 40.0% | |
CAAGTGGCATCACATAATAG+TGG | - | chr7.2:11199264-11199283 | MS.gene20056:intron | 40.0% | |
CACTGAATCATCACATTCAC+AGG | + | chr7.2:11199769-11199788 | None:intergenic | 40.0% | |
CAGCAAGTTTATTCAGTTCG+TGG | - | chr7.2:11199605-11199624 | MS.gene20056:intron | 40.0% | |
CATGTTTCATTTCATGCTCC+TGG | - | chr7.2:11202075-11202094 | MS.gene20056:intron | 40.0% | |
CATTATGTGCAAGATGGTCA+GGG | + | chr7.2:11201388-11201407 | None:intergenic | 40.0% | |
CATTGGAAACTAGAGAGAGA+GGG | - | chr7.2:11198764-11198783 | MS.gene20056:CDS | 40.0% | |
CGCAAATTCGAAAAGCTTCA+AGG | + | chr7.2:11202048-11202067 | None:intergenic | 40.0% | |
CGCATTATCTTCAGCCTTTA+TGG | + | chr7.2:11201309-11201328 | None:intergenic | 40.0% | |
CGGACATTCAATTGCAGAAA+AGG | - | chr7.2:11200544-11200563 | MS.gene20056:CDS | 40.0% | |
CTCATATGATGTCATTGTGG+AGG | + | chr7.2:11199120-11199139 | None:intergenic | 40.0% | |
CTGATCATGATGTTGCTACA+AGG | - | chr7.2:11200999-11201018 | MS.gene20056:intron | 40.0% | |
GACCTTGAAGAATCAGGAAT+GGG | - | chr7.2:11202810-11202829 | MS.gene20056:intron | 40.0% | |
GAGGAGCTACAAAAAGTTTC+TGG | - | chr7.2:11200511-11200530 | MS.gene20056:intron | 40.0% | |
GCACTAGCTCATTTGTAAAG+GGG | + | chr7.2:11198929-11198948 | None:intergenic | 40.0% | |
GCTGAAGATAATGCGAGTAA+GGG | - | chr7.2:11201314-11201333 | MS.gene20056:CDS | 40.0% | |
GTAGATATGAGCAATCTGAG+AGG | - | chr7.2:11200492-11200511 | MS.gene20056:intron | 40.0% | |
TAAACTCTTGACGGAAGACT+GGG | - | chr7.2:11201745-11201764 | MS.gene20056:intron | 40.0% | |
TATAGGATTTATGGGGGGTT+GGG | + | chr7.2:11200329-11200348 | None:intergenic | 40.0% | |
TGAACTAAGGGATAAGGAGT+TGG | + | chr7.2:11200292-11200311 | None:intergenic | 40.0% | |
TGAAGCTCTTAAGATCGATG+AGG | - | chr7.2:11201481-11201500 | MS.gene20056:intron | 40.0% | |
TTGCTACAAGGTTTGTCTTG+TGG | - | chr7.2:11201011-11201030 | MS.gene20056:intron | 40.0% | |
! | AGAACCAAAAAAGACTGGTC+AGG | + | chr7.2:11199810-11199829 | None:intergenic | 40.0% |
! | AGCTGCCCCTTAAAAACTTT+TGG | - | chr7.2:11199566-11199585 | MS.gene20056:intron | 40.0% |
! | AGGTATGCTTCTGAAAGGTT+TGG | + | chr7.2:11199949-11199968 | None:intergenic | 40.0% |
! | CAGGAGCATGAAATGAAACA+TGG | + | chr7.2:11202077-11202096 | None:intergenic | 40.0% |
! | CCAAACTTTCAAAAAGCACG+GGG | + | chr7.2:11200034-11200053 | None:intergenic | 40.0% |
! | CTGGTTTGAACTAAGGGATA+AGG | + | chr7.2:11200298-11200317 | None:intergenic | 40.0% |
! | TTGGTGTTCCTTGTTGTAGA+GGG | - | chr7.2:11201715-11201734 | MS.gene20056:intron | 40.0% |
! | TTTGAGTGATTTGGGGTGAT+GGG | + | chr7.2:11200428-11200447 | None:intergenic | 40.0% |
! | TTTTCATCACTCTCAGCCTT+AGG | - | chr7.2:11198516-11198535 | MS.gene20056:intron | 40.0% |
!! | AGCTGAACTGGTTTGAACTA+AGG | + | chr7.2:11200305-11200324 | None:intergenic | 40.0% |
!! | GCTGAACTGGTTTGAACTAA+GGG | + | chr7.2:11200304-11200323 | None:intergenic | 40.0% |
!! | TTAGAGGCATTGTTGTTACG+TGG | - | chr7.2:11200956-11200975 | MS.gene20056:intron | 40.0% |
!!! | ATTAGTTTTCCTCCTTCGTC+CGG | - | chr7.2:11200248-11200267 | MS.gene20056:CDS | 40.0% |
!!! | CTTTTTTGGTTCTGATCTGG+TGG | - | chr7.2:11199817-11199836 | MS.gene20056:CDS | 40.0% |
!!! | TGAGATTTTTTCCGATCTCC+TGG | - | chr7.2:11199136-11199155 | MS.gene20056:intron | 40.0% |
!!! | TGAGTCTGGTTTTCTTCTCA+AGG | - | chr7.2:11200919-11200938 | MS.gene20056:intron | 40.0% |
AAACGCACAAGATACGACCA+AGG | - | chr7.2:11202783-11202802 | MS.gene20056:intron | 45.0% | |
AACAACTCAGCTGCATTTCC+TGG | + | chr7.2:11199847-11199866 | None:intergenic | 45.0% | |
AACGCACAAGATACGACCAA+GGG | - | chr7.2:11202784-11202803 | MS.gene20056:intron | 45.0% | |
ACAGCCCAAACCCAATACTT+AGG | + | chr7.2:11200782-11200801 | None:intergenic | 45.0% | |
ACTAAGGGATAAGGAGTTGG+AGG | + | chr7.2:11200289-11200308 | None:intergenic | 45.0% | |
AGCTGCTCAAAAATCTCCTC+AGG | - | chr7.2:11201793-11201812 | MS.gene20056:intron | 45.0% | |
CACCCATTCCTGATTCTTCA+AGG | + | chr7.2:11202815-11202834 | None:intergenic | 45.0% | |
CAGTTCTTCGCAAGTTATGC+AGG | - | chr7.2:11199980-11199999 | MS.gene20056:intron | 45.0% | |
CTAAACTCTTGACGGAAGAC+TGG | - | chr7.2:11201744-11201763 | MS.gene20056:intron | 45.0% | |
CTTGAAGAATCAGGAATGGG+TGG | - | chr7.2:11202813-11202832 | MS.gene20056:intron | 45.0% | |
GACACACAAGGAAATCATGC+AGG | + | chr7.2:11199098-11199117 | None:intergenic | 45.0% | |
GGACCTTGAAGAATCAGGAA+TGG | - | chr7.2:11202809-11202828 | MS.gene20056:intron | 45.0% | |
GGCTGAAGATAATGCGAGTA+AGG | - | chr7.2:11201313-11201332 | MS.gene20056:CDS | 45.0% | |
GGGAGAAGCTAAACTCTTGA+CGG | - | chr7.2:11201736-11201755 | MS.gene20056:intron | 45.0% | |
GGTGGAGGTTTCAATCCATT+CGG | - | chr7.2:11202843-11202862 | MS.gene20056:intron | 45.0% | |
GTATAGGATTTATGGGGGGT+TGG | + | chr7.2:11200330-11200349 | None:intergenic | 45.0% | |
GTGCAGCATGTTGCATGAAT+TGG | - | chr7.2:11198671-11198690 | MS.gene20056:intron | 45.0% | |
GTTCACTATGCTCAGGATCT+AGG | + | chr7.2:11201136-11201155 | None:intergenic | 45.0% | |
GTTGTTACCTTAGTGCATGC+TGG | + | chr7.2:11200686-11200705 | None:intergenic | 45.0% | |
TGACAAAAGGGAAGAAGCAG+AGG | - | chr7.2:11202477-11202496 | MS.gene20056:intron | 45.0% | |
TGAGTTCATCAGAGAGAGGA+TGG | - | chr7.2:11199328-11199347 | MS.gene20056:intron | 45.0% | |
TTCATCAGAGAGAGGATGGA+GGG | - | chr7.2:11199332-11199351 | MS.gene20056:intron | 45.0% | |
TTCTGATCTGGTGGAAAACC+AGG | - | chr7.2:11199826-11199845 | MS.gene20056:CDS | 45.0% | |
TTTCTCTCCAGCATGCACTA+AGG | - | chr7.2:11200676-11200695 | MS.gene20056:CDS | 45.0% | |
! | AAGGGGCAAAATGTTGCTTC+TGG | + | chr7.2:11200148-11200167 | None:intergenic | 45.0% |
! | ACTTTCAAAAAGCACGGGGA+TGG | + | chr7.2:11200030-11200049 | None:intergenic | 45.0% |
! | CTTTCAAAAAGCACGGGGAT+GGG | + | chr7.2:11200029-11200048 | None:intergenic | 45.0% |
! | GAAGTTGGCTGACTCATAGA+GGG | + | chr7.2:11200618-11200637 | None:intergenic | 45.0% |
! | GGGAAAGGTATGCTTCTGAA+AGG | + | chr7.2:11199954-11199973 | None:intergenic | 45.0% |
! | GGGTCGTTGCATTGTGTTTT+AGG | - | chr7.2:11202743-11202762 | MS.gene20056:intron | 45.0% |
! | GGTTTGAGTTCATCAGAGAG+AGG | - | chr7.2:11199324-11199343 | MS.gene20056:intron | 45.0% |
! | GTCTGAAACAATCCCCTGTA+AGG | + | chr7.2:11198272-11198291 | None:intergenic | 45.0% |
! | GTTTGAGTGATTTGGGGTGA+TGG | + | chr7.2:11200429-11200448 | None:intergenic | 45.0% |
! | TCTTGTATTGGCGTTGAAGC+TGG | - | chr7.2:11199523-11199542 | MS.gene20056:intron | 45.0% |
! | TGAAGTTGGCTGACTCATAG+AGG | + | chr7.2:11200619-11200638 | None:intergenic | 45.0% |
! | TGGTGTTCCTTGTTGTAGAG+GGG | - | chr7.2:11201716-11201735 | MS.gene20056:intron | 45.0% |
! | TGTAAAGTGCTAGTCAGGCT+TGG | - | chr7.2:11201428-11201447 | MS.gene20056:intron | 45.0% |
! | TTCAGAAGCATACCTTTCCC+AGG | - | chr7.2:11199954-11199973 | MS.gene20056:intron | 45.0% |
! | TTGAGTGATTTGGGGTGATG+GGG | + | chr7.2:11200427-11200446 | None:intergenic | 45.0% |
! | TTTCAAAAAGCACGGGGATG+GGG | + | chr7.2:11200028-11200047 | None:intergenic | 45.0% |
!! | CAACCCTTTGTTTCTGCTTC+AGG | - | chr7.2:11198338-11198357 | MS.gene20056:CDS | 45.0% |
!! | CCCCGTGCTTTTTGAAAGTT+TGG | - | chr7.2:11200031-11200050 | MS.gene20056:CDS | 45.0% |
!! | CTTGGTGTTCCTTGTTGTAG+AGG | - | chr7.2:11201714-11201733 | MS.gene20056:intron | 45.0% |
!! | TTAGTTTTCCTCCTTCGTCC+GGG | - | chr7.2:11200249-11200268 | MS.gene20056:CDS | 45.0% |
!!! | GTTGCCTGACCAGTCTTTTT+TGG | - | chr7.2:11199803-11199822 | MS.gene20056:CDS | 45.0% |
!! | ATACAAAAAAAAAAAATAAA+TGG | + | chr7.2:11198385-11198404 | None:intergenic | 5.0% |
!!! | AAATAATTTGTTTTTTTTAA+TGG | - | chr7.2:11202651-11202670 | MS.gene20056:intron | 5.0% |
ACGCACAAGATACGACCAAG+GGG | - | chr7.2:11202785-11202804 | MS.gene20056:intron | 50.0% | |
ACTTGCCTTACAATGGCACC+CGG | - | chr7.2:11202444-11202463 | MS.gene20056:intron | 50.0% | |
ACTTGCGAAGAACTGAAGCC+TGG | + | chr7.2:11199975-11199994 | None:intergenic | 50.0% | |
AGAAATCGCTGCTGCATACG+AGG | - | chr7.2:11202510-11202529 | MS.gene20056:intron | 50.0% | |
AGCTTCTCCCCTCTACAACA+AGG | + | chr7.2:11201726-11201745 | None:intergenic | 50.0% | |
ATGCGAGTAAGGGCAAGCTA+CGG | - | chr7.2:11201324-11201343 | MS.gene20056:CDS | 50.0% | |
ATTCTTCAAGGTCCTCCCCT+TGG | + | chr7.2:11202803-11202822 | None:intergenic | 50.0% | |
CATAGAGGGACTGAGCTGTT+TGG | + | chr7.2:11200604-11200623 | None:intergenic | 50.0% | |
CGTATGCAGCAGCGATTTCT+CGG | + | chr7.2:11202510-11202529 | None:intergenic | 50.0% | |
CTTCGCAAGTTATGCAGGTG+TGG | - | chr7.2:11199985-11200004 | MS.gene20056:intron | 50.0% | |
CTTGCGAAGAACTGAAGCCT+GGG | + | chr7.2:11199974-11199993 | None:intergenic | 50.0% | |
GAAGAACTGAAGCCTGGGAA+AGG | + | chr7.2:11199969-11199988 | None:intergenic | 50.0% | |
GAAGAATCAGGAATGGGTGG+CGG | - | chr7.2:11202816-11202835 | MS.gene20056:intron | 50.0% | |
GATAAGGAGTTGGAGGTCCT+GGG | + | chr7.2:11200282-11200301 | None:intergenic | 50.0% | |
GATCTAGGCGAAGACCTTTC+TGG | + | chr7.2:11201121-11201140 | None:intergenic | 50.0% | |
GCCTGACTAGCACTTTACAC+AGG | + | chr7.2:11201427-11201446 | None:intergenic | 50.0% | |
GGAGGTTTCAATCCATTCGG+TGG | - | chr7.2:11202846-11202865 | MS.gene20056:intron | 50.0% | |
GTCATTGTGGAGGACACACA+AGG | + | chr7.2:11199110-11199129 | None:intergenic | 50.0% | |
GTTCATCAGAGAGAGGATGG+AGG | - | chr7.2:11199331-11199350 | MS.gene20056:intron | 50.0% | |
TCATCAGAGAGAGGATGGAG+GGG | - | chr7.2:11199333-11199352 | MS.gene20056:intron | 50.0% | |
! | ATGAGAAGTGTGAGGGAAGG+AGG | + | chr7.2:11200398-11200417 | None:intergenic | 50.0% |
! | GAGATGAGAAGTGTGAGGGA+AGG | + | chr7.2:11200401-11200420 | None:intergenic | 50.0% |
! | GCCTGTGTAAAGTGCTAGTC+AGG | - | chr7.2:11201423-11201442 | MS.gene20056:intron | 50.0% |
! | GGAGGAGATGAGAAGTGTGA+GGG | + | chr7.2:11200405-11200424 | None:intergenic | 50.0% |
! | GGTTTCAATCCATTCGGTGG+TGG | - | chr7.2:11202849-11202868 | MS.gene20056:intron | 50.0% |
! | TGAGAAGTGTGAGGGAAGGA+GGG | + | chr7.2:11200397-11200416 | None:intergenic | 50.0% |
! | TGAGTGATTTGGGGTGATGG+GGG | + | chr7.2:11200426-11200445 | None:intergenic | 50.0% |
! | TGCGCGTTTTATCTCAGCAG+CGG | + | chr7.2:11202416-11202435 | None:intergenic | 50.0% |
! | TTCAATCCATTCGGTGGTGG+TGG | - | chr7.2:11202852-11202871 | MS.gene20056:intron | 50.0% |
!! | ATGGATTCGGTGCCTTACAG+GGG | - | chr7.2:11198257-11198276 | MS.gene20056:CDS | 50.0% |
!! | CTTATCCGGGTGCCATTGTA+AGG | + | chr7.2:11202452-11202471 | None:intergenic | 50.0% |
!!! | ACTTTTGATGGTGGCTTCCC+TGG | - | chr7.2:11202891-11202910 | MS.gene20056:CDS | 50.0% |
ACTCTTGACGGAAGACTGGG+AGG | - | chr7.2:11201748-11201767 | MS.gene20056:intron | 55.0% | |
CACAAGATACGACCAAGGGG+AGG | - | chr7.2:11202788-11202807 | MS.gene20056:intron | 55.0% | |
CACGGGGATGGGGTAATACT+TGG | + | chr7.2:11200018-11200037 | None:intergenic | 55.0% | |
CTCTTGACGGAAGACTGGGA+GGG | - | chr7.2:11201749-11201768 | MS.gene20056:intron | 55.0% | |
GAGGTCCTGGGTTCAAAACC+CGG | + | chr7.2:11200270-11200289 | None:intergenic | 55.0% | |
GGAGCTCTCTCAGCTATTGC+AGG | - | chr7.2:11200565-11200584 | MS.gene20056:CDS | 55.0% | |
GGATAAGGAGTTGGAGGTCC+TGG | + | chr7.2:11200283-11200302 | None:intergenic | 55.0% | |
GGGGAGGACCTTGAAGAATC+AGG | - | chr7.2:11202804-11202823 | MS.gene20056:intron | 55.0% | |
GGTGGCAGTGGAGGAATTCA+AGG | - | chr7.2:11201346-11201365 | MS.gene20056:CDS | 55.0% | |
GTTCAAAACCCGGACGAAGG+AGG | + | chr7.2:11200260-11200279 | None:intergenic | 55.0% | |
TGCGAGTAAGGGCAAGCTAC+GGG | - | chr7.2:11201325-11201344 | MS.gene20056:CDS | 55.0% | |
TGGGTTCAAAACCCGGACGA+AGG | + | chr7.2:11200263-11200282 | None:intergenic | 55.0% | |
! | AGAAGTGTGAGGGAAGGAGG+GGG | + | chr7.2:11200395-11200414 | None:intergenic | 55.0% |
! | GAGAAGTGTGAGGGAAGGAG+GGG | + | chr7.2:11200396-11200415 | None:intergenic | 55.0% |
! | GGGAGGAGATGAGAAGTGTG+AGG | + | chr7.2:11200406-11200425 | None:intergenic | 55.0% |
!! | TTTGATGGTGGCTTCCCTGG+TGG | - | chr7.2:11202894-11202913 | MS.gene20056:CDS | 55.0% |
!!! | TTCGTCCGGGTTTTGAACCC+AGG | - | chr7.2:11200262-11200281 | MS.gene20056:CDS | 55.0% |
GAGTAAGGGCAAGCTACGGG+TGG | - | chr7.2:11201328-11201347 | MS.gene20056:CDS | 60.0% | |
GTGCTAGTCAGGCTTGGCAG+AGG | - | chr7.2:11201434-11201453 | MS.gene20056:intron | 60.0% | |
TGCTGTCCACCACCACCGAA+TGG | + | chr7.2:11202861-11202880 | None:intergenic | 60.0% | |
TTCCCTGGTGGAGGCTTTCC+CGG | - | chr7.2:11202906-11202925 | MS.gene20056:CDS | 60.0% | |
! | GAATCAGGAATGGGTGGCGG+CGG | - | chr7.2:11202819-11202838 | MS.gene20056:intron | 60.0% |
!! | GAGGGTGCCATTGCTGAGTC+TGG | - | chr7.2:11200905-11200924 | MS.gene20056:intron | 60.0% |
!! | GTGATTTGGGGTGATGGGGG+AGG | + | chr7.2:11200423-11200442 | None:intergenic | 60.0% |
CAAGCTACGGGTGGCAGTGG+AGG | - | chr7.2:11201337-11201356 | MS.gene20056:CDS | 65.0% | |
CACCGGGAAAGCCTCCACCA+GGG | + | chr7.2:11202911-11202930 | None:intergenic | 65.0% | |
GAGGGAAGGAGGGGGATGAG+TGG | + | chr7.2:11200387-11200406 | None:intergenic | 65.0% | |
GAGGGGGATGAGTGGCGCAA+TGG | + | chr7.2:11200379-11200398 | None:intergenic | 65.0% | |
GGGGGGTTGGGTAGCTGAAC+TGG | + | chr7.2:11200317-11200336 | None:intergenic | 65.0% | |
GTGGTCACGAGTCACGACCC+AGG | + | chr7.2:11199041-11199060 | None:intergenic | 65.0% | |
! | GATGGTGGCTTCCCTGGTGG+AGG | - | chr7.2:11202897-11202916 | MS.gene20056:CDS | 65.0% |
CCACCGGGAAAGCCTCCACC+AGG | + | chr7.2:11202912-11202931 | None:intergenic | 70.0% | |
CCTGGTGGAGGCTTTCCCGG+TGG | - | chr7.2:11202909-11202928 | MS.gene20056:CDS | 70.0% | |
GGGCAAGCTACGGGTGGCAG+TGG | - | chr7.2:11201334-11201353 | MS.gene20056:CDS | 70.0% | |
GGTGGAGGCTTTCCCGGTGG+CGG | - | chr7.2:11202912-11202931 | MS.gene20056:CDS | 70.0% | |
! | TCAGGAATGGGTGGCGGCGG+CGG | - | chr7.2:11202822-11202841 | MS.gene20056:intron | 70.0% |
GTAACCACCGCCGCCGCCAC+CGG | + | chr7.2:11202928-11202947 | None:intergenic | 75.0% | |
TAACCACCGCCGCCGCCACC+GGG | + | chr7.2:11202927-11202946 | None:intergenic | 75.0% | |
! | GGAGGCTTTCCCGGTGGCGG+CGG | - | chr7.2:11202915-11202934 | MS.gene20056:CDS | 75.0% |
!! | ATGGGTGGCGGCGGCGGTGG+AGG | - | chr7.2:11202828-11202847 | MS.gene20056:intron | 80.0% |
!! | GGAATGGGTGGCGGCGGCGG+TGG | - | chr7.2:11202825-11202844 | MS.gene20056:intron | 80.0% |
!! | GGCTTTCCCGGTGGCGGCGG+CGG | - | chr7.2:11202918-11202937 | MS.gene20056:CDS | 80.0% |
!! | TTTCCCGGTGGCGGCGGCGG+TGG | - | chr7.2:11202921-11202940 | MS.gene20056:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 11198257 | 11202962 | 11198257 | ID=MS.gene20056 |
chr7.2 | mRNA | 11198257 | 11202962 | 11198257 | ID=MS.gene20056.t1;Parent=MS.gene20056 |
chr7.2 | exon | 11202860 | 11202962 | 11202860 | ID=MS.gene20056.t1.exon1;Parent=MS.gene20056.t1 |
chr7.2 | CDS | 11202860 | 11202962 | 11202860 | ID=cds.MS.gene20056.t1;Parent=MS.gene20056.t1 |
chr7.2 | exon | 11201218 | 11201371 | 11201218 | ID=MS.gene20056.t1.exon2;Parent=MS.gene20056.t1 |
chr7.2 | CDS | 11201218 | 11201371 | 11201218 | ID=cds.MS.gene20056.t1;Parent=MS.gene20056.t1 |
chr7.2 | exon | 11200522 | 11200723 | 11200522 | ID=MS.gene20056.t1.exon3;Parent=MS.gene20056.t1 |
chr7.2 | CDS | 11200522 | 11200723 | 11200522 | ID=cds.MS.gene20056.t1;Parent=MS.gene20056.t1 |
chr7.2 | exon | 11200199 | 11200359 | 11200199 | ID=MS.gene20056.t1.exon4;Parent=MS.gene20056.t1 |
chr7.2 | CDS | 11200199 | 11200359 | 11200199 | ID=cds.MS.gene20056.t1;Parent=MS.gene20056.t1 |
chr7.2 | exon | 11200014 | 11200107 | 11200014 | ID=MS.gene20056.t1.exon5;Parent=MS.gene20056.t1 |
chr7.2 | CDS | 11200014 | 11200107 | 11200014 | ID=cds.MS.gene20056.t1;Parent=MS.gene20056.t1 |
chr7.2 | exon | 11199693 | 11199905 | 11199693 | ID=MS.gene20056.t1.exon6;Parent=MS.gene20056.t1 |
chr7.2 | CDS | 11199693 | 11199905 | 11199693 | ID=cds.MS.gene20056.t1;Parent=MS.gene20056.t1 |
chr7.2 | exon | 11199405 | 11199485 | 11199405 | ID=MS.gene20056.t1.exon7;Parent=MS.gene20056.t1 |
chr7.2 | CDS | 11199405 | 11199485 | 11199405 | ID=cds.MS.gene20056.t1;Parent=MS.gene20056.t1 |
chr7.2 | exon | 11198688 | 11198906 | 11198688 | ID=MS.gene20056.t1.exon8;Parent=MS.gene20056.t1 |
chr7.2 | CDS | 11198688 | 11198906 | 11198688 | ID=cds.MS.gene20056.t1;Parent=MS.gene20056.t1 |
chr7.2 | exon | 11198257 | 11198454 | 11198257 | ID=MS.gene20056.t1.exon9;Parent=MS.gene20056.t1 |
chr7.2 | CDS | 11198257 | 11198454 | 11198257 | ID=cds.MS.gene20056.t1;Parent=MS.gene20056.t1 |
Gene Sequence |
Protein sequence |