AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene00961


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene00961.t1 MTR_2g020710 98.351 485 8 0 1 485 1 485 0.0 964
MS.gene00961.t1 MTR_4g118610 81.967 488 85 1 1 485 1 488 0.0 833
MS.gene00961.t1 MTR_2g020710 98.537 410 6 0 1 410 1 410 0.0 820
MS.gene00961.t1 MTR_2g020710 98.533 409 6 0 1 409 1 409 0.0 817
MS.gene00961.t1 MTR_2g020710 98.737 396 5 0 90 485 1 396 0.0 782
MS.gene00961.t1 MTR_2g020710 98.383 371 6 0 1 371 1 371 0.0 744
MS.gene00961.t1 MTR_4g118610 81.114 413 75 1 1 410 1 413 0.0 694
MS.gene00961.t1 MTR_7g094110 56.495 485 203 4 1 485 1 477 0.0 536
MS.gene00961.t1 MTR_7g094450 54.037 483 214 3 3 485 1 475 0.0 529
MS.gene00961.t1 MTR_7g113970 56.221 434 189 1 52 485 65 497 1.12e-175 503
MS.gene00961.t1 MTR_7g113960 55.149 437 193 2 48 484 26 459 6.91e-173 495
MS.gene00961.t1 MTR_7g094110 54.021 485 195 5 1 485 1 457 1.36e-172 493
MS.gene00961.t1 MTR_5g020270 44.172 489 255 5 6 482 5 487 3.34e-139 409
MS.gene00961.t1 MTR_8g077310 44.075 481 258 4 13 483 6 485 2.26e-138 407
MS.gene00961.t1 MTR_1g022315 43.552 473 254 3 20 480 14 485 6.22e-135 399
MS.gene00961.t1 MTR_5g020270 42.127 489 244 6 6 482 5 466 5.78e-130 385
MS.gene00961.t1 MTR_7g113970 53.372 341 158 1 52 392 65 404 2.62e-124 369
MS.gene00961.t1 MTR_7g113960 51.124 356 171 2 48 403 26 378 8.53e-123 364
MS.gene00961.t1 MTR_8g077300 39.167 480 280 2 7 482 5 476 2.55e-121 363
MS.gene00961.t1 MTR_5g020270 45.361 388 206 2 100 482 1 387 1.62e-116 348
MS.gene00961.t1 MTR_8g077310 44.588 388 211 1 100 483 1 388 2.39e-116 347
MS.gene00961.t1 MTR_1g022315 44.819 386 208 1 100 480 1 386 1.97e-114 343
MS.gene00961.t1 MTR_8g077310 44.658 365 195 3 13 371 6 369 2.44e-100 307
MS.gene00961.t1 MTR_6g018790 30.998 471 304 7 27 485 83 544 2.97e-59 204
MS.gene00961.t1 MTR_7g082270 30.704 469 307 7 26 484 43 503 1.22e-57 199
MS.gene00961.t1 MTR_1g116660 34.465 383 239 6 109 480 98 479 2.27e-57 198
MS.gene00961.t1 MTR_7g446340 30.061 489 314 9 12 480 19 499 9.75e-57 197
MS.gene00961.t1 MTR_6g007340 30.061 489 314 9 12 480 19 499 9.75e-57 197
MS.gene00961.t1 MTR_2g013310 31.354 421 268 7 77 480 8 424 4.74e-53 185
MS.gene00961.t1 MTR_4g069500 30.206 437 270 9 77 482 8 440 9.20e-53 185
MS.gene00961.t1 MTR_3g084110 30.233 473 311 10 23 479 2 471 1.00e-52 186
MS.gene00961.t1 MTR_2g013310 31.354 421 268 7 77 480 81 497 1.66e-52 186
MS.gene00961.t1 MTR_4g069500 29.736 454 284 9 60 482 41 490 1.92e-52 185
MS.gene00961.t1 MTR_1g116650 33.850 387 223 7 109 480 141 509 1.04e-51 184
MS.gene00961.t1 MTR_4g077740 26.829 492 320 8 24 481 13 498 1.46e-51 182
MS.gene00961.t1 MTR_7g005910 33.247 388 240 7 107 480 94 476 1.69e-51 182
MS.gene00961.t1 MTR_3g116240 30.345 435 274 8 77 482 56 490 1.38e-50 180
MS.gene00961.t1 MTR_7g082270 31.387 411 267 6 26 428 43 446 1.92e-49 176
MS.gene00961.t1 MTR_4g072030 28.416 461 290 9 55 482 33 486 3.48e-49 176
MS.gene00961.t1 MTR_5g075300 29.655 435 273 11 77 480 47 479 1.24e-46 169
MS.gene00961.t1 MTR_4g013205 30.425 447 287 11 50 483 37 472 1.39e-44 163
MS.gene00961.t1 MTR_6g088450 28.795 448 293 9 50 475 59 502 2.37e-43 160
MS.gene00961.t1 MTR_8g077890 29.613 439 268 13 77 480 47 479 2.79e-43 160
MS.gene00961.t1 MTR_8g103500 28.512 477 297 10 37 480 3 468 2.32e-42 157
MS.gene00961.t1 MTR_6g087910 29.095 464 295 11 38 483 39 486 2.47e-42 157
MS.gene00961.t1 MTR_3g023480 28.538 424 283 9 73 480 66 485 3.24e-39 149
MS.gene00961.t1 MTR_3g080240 27.333 450 295 9 54 485 98 533 5.89e-38 145
MS.gene00961.t1 MTR_3g007910 25.696 467 302 10 36 479 9 453 6.01e-37 142
MS.gene00961.t1 MTR_7g094420 47.134 157 61 2 292 448 1 135 7.32e-37 132
MS.gene00961.t1 MTR_3g093010 27.386 482 307 13 36 479 9 485 1.10e-36 142
MS.gene00961.t1 MTR_0204s0020 27.033 492 300 16 29 479 2 475 7.82e-36 139
MS.gene00961.t1 MTR_0204s0020 26.869 495 300 16 29 479 2 478 1.45e-35 138
MS.gene00961.t1 MTR_1g104750 26.521 411 280 7 89 483 83 487 2.49e-35 138
MS.gene00961.t1 MTR_5g006070 27.494 411 276 9 89 483 35 439 9.26e-35 135
MS.gene00961.t1 MTR_0009s0370 26.961 408 278 9 89 480 82 485 1.02e-34 136
MS.gene00961.t1 MTR_0204s0040 27.295 414 263 12 89 479 88 486 1.10e-34 136
MS.gene00961.t1 MTR_2g049020 31.250 336 214 7 49 368 26 360 1.14e-34 137
MS.gene00961.t1 MTR_5g006070 27.494 411 276 9 89 483 83 487 1.41e-34 136
MS.gene00961.t1 MTR_4g069500 30.333 300 181 7 207 482 6 301 1.50e-34 132
MS.gene00961.t1 MTR_3g074270 24.500 400 276 7 88 479 81 462 1.84e-34 135
MS.gene00961.t1 MTR_5g077580 25.232 539 279 12 49 480 26 547 1.99e-34 136
MS.gene00961.t1 MTR_3g008160 26.383 470 302 11 48 480 22 484 2.19e-34 135
MS.gene00961.t1 MTR_4g116770 27.295 414 263 12 89 479 284 682 2.28e-34 137
MS.gene00961.t1 MTR_3g074410 24.939 413 279 8 89 480 84 486 2.34e-34 135
MS.gene00961.t1 MTR_3g008160 27.384 409 273 9 89 480 34 435 3.26e-34 134
MS.gene00961.t1 MTR_1g104770 25.666 413 285 7 87 483 82 488 3.33e-34 134
MS.gene00961.t1 MTR_7g021390 56.604 106 29 2 380 485 55 143 1.21e-33 124
MS.gene00961.t1 MTR_5g019870 27.088 443 275 13 77 480 43 476 2.11e-33 132
MS.gene00961.t1 MTR_3g093060 25.799 407 282 9 89 479 36 438 4.01e-33 131
MS.gene00961.t1 MTR_3g074390 26.521 411 273 7 89 479 87 488 5.97e-33 131
MS.gene00961.t1 MTR_1g104780 28.424 387 261 7 110 483 104 487 6.75e-33 131
MS.gene00961.t1 MTR_8g102860 29.584 409 261 11 89 479 34 433 2.54e-32 129
MS.gene00961.t1 MTR_8g102860 29.584 409 261 11 89 479 86 485 4.37e-32 129
MS.gene00961.t1 MTR_3g008170 27.654 358 236 9 140 480 134 485 5.14e-32 129
MS.gene00961.t1 MTR_5g041550 25.527 427 292 12 74 479 65 486 1.94e-31 127
MS.gene00961.t1 MTR_4g090600 28.165 387 258 9 109 479 103 485 1.21e-30 124
MS.gene00961.t1 MTR_6g087040 27.952 415 260 11 89 479 86 485 1.37e-30 124
MS.gene00961.t1 MTR_6g088375 27.952 415 260 11 89 479 86 485 1.37e-30 124
MS.gene00961.t1 MTR_1g038630 25.153 489 324 8 28 480 2 484 1.43e-30 124
MS.gene00961.t1 MTR_4g116790 26.456 412 269 10 89 479 86 484 2.66e-30 124
MS.gene00961.t1 MTR_4g091370 27.110 391 259 8 109 480 103 486 5.41e-30 123
MS.gene00961.t1 MTR_2g048720 29.889 271 177 6 109 368 89 357 1.64e-29 122
MS.gene00961.t1 MTR_1g038600 25.156 481 316 8 28 480 2 466 2.83e-29 120
MS.gene00961.t1 MTR_7g091690 27.791 421 263 14 82 479 82 484 5.92e-28 117
MS.gene00961.t1 MTR_5g094760 27.553 421 264 14 82 479 82 484 9.40e-28 116
MS.gene00961.t1 MTR_5g082540 26.044 407 280 6 89 480 84 484 1.61e-27 115
MS.gene00961.t1 MTR_7g094430 59.091 88 36 0 166 253 53 140 1.97e-27 108
MS.gene00961.t1 MTR_3g074380 28.358 268 183 4 88 347 84 350 4.46e-27 112
MS.gene00961.t1 MTR_4g064820 26.972 393 246 10 30 391 79 461 1.06e-26 113
MS.gene00961.t1 MTR_2g026160 28.058 278 183 5 107 368 88 364 2.41e-25 109
MS.gene00961.t1 MTR_2g026160 37.374 99 61 1 383 480 455 553 2.41e-13 72.8
MS.gene00961.t1 MTR_3g074340 25.172 290 203 4 200 479 31 316 1.71e-22 98.6
MS.gene00961.t1 MTR_3g074370 25.172 290 203 4 200 479 31 316 2.00e-22 98.6
MS.gene00961.t1 MTR_3g074320 25.172 290 203 4 200 479 31 316 5.03e-22 97.4
MS.gene00961.t1 MTR_3g116060 33.163 196 117 4 77 262 32 223 4.57e-21 97.1
MS.gene00961.t1 MTR_3g116060 28.111 217 140 3 276 479 500 713 1.48e-14 76.6
MS.gene00961.t1 MTR_4g116790 27.143 280 174 8 89 350 86 353 6.77e-21 94.7
MS.gene00961.t1 MTR_5g044910 29.070 258 154 7 246 479 451 703 3.23e-17 85.1
MS.gene00961.t1 MTR_5g044910 30.128 156 101 3 106 254 63 217 1.27e-15 80.1
MS.gene00961.t1 MTR_5g024740 29.870 231 141 6 267 479 478 705 1.28e-16 83.2
MS.gene00961.t1 MTR_5g024740 32.500 160 96 4 104 254 61 217 1.64e-14 76.6
MS.gene00961.t1 MTR_3g074400 21.867 375 256 9 88 454 32 377 4.85e-16 80.5
MS.gene00961.t1 MTR_7g118110 39.344 122 50 2 270 391 130 227 9.39e-16 79.0
MS.gene00961.t1 MTR_3g118530 34.783 161 97 3 97 249 54 214 2.87e-15 79.0
MS.gene00961.t1 MTR_3g118530 28.440 218 140 3 275 479 509 723 3.19e-15 79.0
MS.gene00961.t1 MTR_3g118530 34.783 161 97 3 97 249 54 214 3.35e-15 78.6
MS.gene00961.t1 MTR_2g026140 24.252 301 194 8 107 391 85 367 1.32e-14 76.6
MS.gene00961.t1 MTR_8g073100 28.910 211 132 5 283 479 495 701 1.62e-14 76.6
MS.gene00961.t1 MTR_8g073100 27.228 202 131 7 67 254 18 217 6.37e-12 68.6
MS.gene00961.t1 MTR_8g447340 23.423 444 265 17 68 476 104 507 5.18e-12 68.6
MS.gene00961.t1 MTR_4g081490 24.557 395 255 12 102 478 66 435 5.33e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene00961.t1 AT5G18840 69.835 484 139 2 1 483 1 478 0.0 678
MS.gene00961.t1 AT2G48020 58.963 463 186 2 25 484 1 462 0.0 567
MS.gene00961.t1 AT2G48020 58.963 463 186 2 25 484 1 462 0.0 567
MS.gene00961.t1 AT3G05150 54.375 480 205 4 3 481 1 467 0.0 520
MS.gene00961.t1 AT3G05150 54.375 480 205 4 3 481 1 467 0.0 520
MS.gene00961.t1 AT3G05150 54.375 480 205 4 3 481 1 467 0.0 520
MS.gene00961.t1 AT1G54730 54.884 430 193 1 54 483 37 465 1.15e-174 499
MS.gene00961.t1 AT1G54730 54.135 399 182 1 54 452 37 434 1.15e-159 460
MS.gene00961.t1 AT1G54730 51.860 430 185 2 54 483 37 444 2.23e-158 457
MS.gene00961.t1 AT2G48020 57.724 369 152 2 25 390 1 368 2.13e-152 439
MS.gene00961.t1 AT1G54730 50.877 399 174 2 54 452 37 413 2.25e-143 417
MS.gene00961.t1 AT3G20460 44.215 484 265 4 3 484 7 487 5.78e-143 419
MS.gene00961.t1 AT1G08930 44.040 495 263 5 3 485 1 493 1.50e-140 413
MS.gene00961.t1 AT1G08930 44.040 495 263 5 3 485 1 493 1.50e-140 413
MS.gene00961.t1 AT3G05165 42.366 465 258 3 20 484 10 464 3.00e-140 411
MS.gene00961.t1 AT3G05165 42.366 465 258 3 20 484 10 464 3.00e-140 411
MS.gene00961.t1 AT3G05165 42.366 465 258 3 20 484 10 464 3.00e-140 411
MS.gene00961.t1 AT3G05160 45.413 436 237 1 49 484 21 455 7.62e-140 410
MS.gene00961.t1 AT5G27350 46.841 459 241 2 25 483 9 464 8.08e-140 410
MS.gene00961.t1 AT2G48020 59.337 332 131 2 25 353 1 331 6.60e-139 404
MS.gene00961.t1 AT1G08920 46.575 438 233 1 48 485 31 467 3.42e-138 406
MS.gene00961.t1 AT1G54730 53.463 361 167 1 54 414 37 396 5.85e-138 404
MS.gene00961.t1 AT1G54730 53.463 361 167 1 54 414 37 396 5.85e-138 404
MS.gene00961.t1 AT4G04760 45.977 435 231 2 50 481 32 465 1.92e-136 402
MS.gene00961.t1 AT1G08920 45.843 445 233 2 48 485 31 474 1.53e-135 400
MS.gene00961.t1 AT5G27360 46.667 435 231 1 49 483 35 468 1.74e-135 400
MS.gene00961.t1 AT5G27360 43.892 483 252 4 1 483 53 516 6.13e-135 400
MS.gene00961.t1 AT1G75220 42.946 482 264 3 10 481 4 484 2.08e-134 397
MS.gene00961.t1 AT4G04750 43.722 446 248 2 41 484 28 472 8.12e-132 390
MS.gene00961.t1 AT4G04750 43.722 446 248 2 41 484 28 472 8.12e-132 390
MS.gene00961.t1 AT4G04750 43.722 446 248 2 41 484 72 516 2.52e-131 391
MS.gene00961.t1 AT1G08890 45.233 451 242 2 33 483 15 460 1.58e-129 384
MS.gene00961.t1 AT3G05155 43.982 457 240 4 36 480 3 455 7.12e-129 382
MS.gene00961.t1 AT3G05165 42.627 434 239 3 20 453 10 433 1.04e-128 384
MS.gene00961.t1 AT1G19450 41.909 482 269 3 10 481 5 485 1.60e-128 382
MS.gene00961.t1 AT3G05160 44.691 405 223 1 80 484 3 406 4.29e-128 378
MS.gene00961.t1 AT3G05160 44.691 405 223 1 80 484 3 406 4.29e-128 378
MS.gene00961.t1 AT1G08920 46.883 401 212 1 48 448 31 430 1.82e-126 375
MS.gene00961.t1 AT4G04760 45.679 405 216 2 80 481 3 406 2.93e-125 371
MS.gene00961.t1 AT3G05400 43.498 446 251 1 37 482 14 458 9.16e-125 372
MS.gene00961.t1 AT1G08900 44.138 435 242 1 49 483 25 458 1.13e-124 372
MS.gene00961.t1 AT1G08900 44.138 435 242 1 49 483 25 458 1.13e-124 372
MS.gene00961.t1 AT4G04760 43.508 439 233 5 50 481 32 462 1.34e-122 367
MS.gene00961.t1 AT1G54730 49.861 361 159 2 54 414 37 375 9.73e-122 362
MS.gene00961.t1 AT1G54730 55.298 302 134 1 54 355 37 337 2.03e-119 353
MS.gene00961.t1 AT3G05165 41.429 420 236 3 20 439 10 419 2.58e-119 358
MS.gene00961.t1 AT3G05165 41.429 420 236 3 20 439 10 419 2.58e-119 358
MS.gene00961.t1 AT1G08900 43.645 417 234 1 67 483 1 416 9.13e-119 355
MS.gene00961.t1 AT1G08900 43.218 435 238 2 49 483 25 450 4.30e-118 354
MS.gene00961.t1 AT3G05400 42.152 446 237 3 37 482 14 438 2.70e-114 344
MS.gene00961.t1 AT1G54730 55.124 283 126 1 54 336 37 318 7.69e-109 326
MS.gene00961.t1 AT1G54730 55.124 283 126 1 54 336 37 318 7.69e-109 326
MS.gene00961.t1 AT1G08900 42.537 402 230 1 49 450 25 425 5.43e-108 328
MS.gene00961.t1 AT5G27360 45.479 365 198 1 119 483 1 364 5.61e-108 325
MS.gene00961.t1 AT5G27360 45.479 365 198 1 119 483 1 364 5.61e-108 325
MS.gene00961.t1 AT5G27360 41.895 401 215 2 49 449 35 417 1.61e-102 314
MS.gene00961.t1 AT3G05155 43.598 328 170 3 36 352 3 326 1.31e-88 274
MS.gene00961.t1 AT5G16150 31.277 470 306 6 26 485 82 544 6.10e-59 203
MS.gene00961.t1 AT5G16150 31.277 470 306 6 26 485 82 544 6.10e-59 203
MS.gene00961.t1 AT5G16150 31.277 470 306 6 26 485 82 544 6.10e-59 203
MS.gene00961.t1 AT3G03090 29.283 502 308 12 9 481 17 500 8.50e-56 194
MS.gene00961.t1 AT5G17010 28.180 511 318 12 4 481 6 500 3.87e-54 189
MS.gene00961.t1 AT5G17010 28.180 511 318 12 4 481 6 500 3.87e-54 189
MS.gene00961.t1 AT5G17010 28.180 511 318 12 4 481 6 500 3.87e-54 189
MS.gene00961.t1 AT2G43330 33.504 391 233 10 109 480 94 476 6.11e-53 186
MS.gene00961.t1 AT5G59250 29.545 484 304 11 30 483 80 556 2.22e-50 181
MS.gene00961.t1 AT2G20780 31.042 451 284 9 49 480 55 497 1.49e-49 177
MS.gene00961.t1 AT2G16130 29.954 434 275 7 77 481 54 487 3.37e-49 176
MS.gene00961.t1 AT2G16120 29.075 454 285 7 60 480 37 486 4.54e-49 176
MS.gene00961.t1 AT2G20780 31.517 422 262 9 78 480 26 439 5.29e-49 175
MS.gene00961.t1 AT3G18830 27.523 436 280 8 77 480 64 495 6.09e-48 173
MS.gene00961.t1 AT4G36670 29.825 456 290 9 55 481 23 477 4.36e-46 167
MS.gene00961.t1 AT1G05030 30.318 409 255 7 93 485 73 467 5.08e-45 164
MS.gene00961.t1 AT1G05030 29.778 450 282 9 55 485 85 519 5.72e-45 165
MS.gene00961.t1 AT1G67300 29.289 478 289 11 33 483 35 490 3.78e-44 162
MS.gene00961.t1 AT2G18480 26.503 449 295 7 63 480 36 480 8.40e-43 159
MS.gene00961.t1 AT1G67300 29.289 478 288 12 33 483 35 489 1.62e-42 158
MS.gene00961.t1 AT1G67300 29.289 478 288 12 33 483 35 489 1.62e-42 158
MS.gene00961.t1 AT1G79820 30.085 472 288 12 36 485 41 492 1.11e-39 150
MS.gene00961.t1 AT1G79820 30.085 472 288 12 36 485 41 492 1.11e-39 150
MS.gene00961.t1 AT3G05960 28.029 421 259 9 89 483 80 482 2.15e-36 141
MS.gene00961.t1 AT5G26340 27.913 412 273 9 89 483 84 488 9.03e-36 139
MS.gene00961.t1 AT4G21480 28.117 409 270 8 89 480 83 484 2.90e-35 137
MS.gene00961.t1 AT5G26250 27.229 415 270 9 89 483 81 483 3.93e-35 137
MS.gene00961.t1 AT1G67300 28.842 423 252 11 33 429 35 434 7.78e-35 135
MS.gene00961.t1 AT1G67300 28.842 423 252 11 33 429 35 434 7.78e-35 135
MS.gene00961.t1 AT1G11260 27.073 410 273 9 89 479 83 485 2.01e-34 135
MS.gene00961.t1 AT1G67300 29.056 413 244 11 33 419 35 424 6.97e-34 132
MS.gene00961.t1 AT1G67300 29.056 413 244 11 33 419 35 424 6.97e-34 132
MS.gene00961.t1 AT1G79820 29.782 413 253 10 36 429 41 435 7.98e-34 133
MS.gene00961.t1 AT5G23270 26.585 410 274 8 89 479 85 486 2.12e-32 130
MS.gene00961.t1 AT3G19940 25.672 409 278 9 89 479 85 485 5.24e-32 129
MS.gene00961.t1 AT1G07340 27.228 404 277 8 89 479 82 481 1.46e-31 127
MS.gene00961.t1 AT5G17010 24.048 499 274 12 21 482 8 438 3.67e-31 125
MS.gene00961.t1 AT1G77210 27.941 408 269 10 89 479 86 485 9.72e-31 125
MS.gene00961.t1 AT1G77210 27.941 408 269 10 89 479 86 485 9.72e-31 125
MS.gene00961.t1 AT3G19930 26.291 426 291 9 70 480 67 484 2.60e-30 124
MS.gene00961.t1 AT3G19930 26.291 426 291 9 70 480 67 484 2.60e-30 124
MS.gene00961.t1 AT1G30220 31.765 340 208 11 49 368 28 363 3.02e-30 124
MS.gene00961.t1 AT1G30220 35.922 103 57 2 383 480 455 553 1.46e-11 67.0
MS.gene00961.t1 AT1G50310 25.610 410 278 10 89 479 85 486 4.73e-30 123
MS.gene00961.t1 AT4G02050 27.920 351 229 9 145 479 142 484 4.08e-29 120
MS.gene00961.t1 AT4G02050 27.920 351 229 9 145 479 142 484 4.08e-29 120
MS.gene00961.t1 AT5G61520 27.222 360 226 9 142 479 94 439 3.63e-27 114
MS.gene00961.t1 AT5G61520 27.222 360 226 9 142 479 142 487 4.16e-27 114
MS.gene00961.t1 AT1G34580 25.845 414 275 11 89 479 33 437 2.12e-25 108
MS.gene00961.t1 AT1G34580 25.845 414 275 11 89 479 83 487 2.67e-25 109
MS.gene00961.t1 AT2G35740 27.211 294 194 8 93 369 73 363 2.24e-24 107
MS.gene00961.t1 AT2G35740 37.374 99 61 1 383 480 458 556 1.69e-13 73.2
MS.gene00961.t1 AT1G50310 25.444 338 225 10 161 479 14 343 5.69e-24 103
MS.gene00961.t1 AT4G16480 29.562 274 169 9 109 363 90 358 8.70e-24 105
MS.gene00961.t1 AT4G16480 35.354 99 63 1 383 480 459 557 7.57e-13 71.2
MS.gene00961.t1 AT4G16480 29.562 274 169 9 109 363 90 358 8.70e-24 105
MS.gene00961.t1 AT4G16480 35.354 99 63 1 383 480 459 557 7.57e-13 71.2
MS.gene00961.t1 AT4G16480 29.562 274 169 9 109 363 90 358 8.70e-24 105
MS.gene00961.t1 AT4G16480 35.354 99 63 1 383 480 459 557 7.57e-13 71.2
MS.gene00961.t1 AT1G77210 28.363 342 210 11 160 479 8 336 2.84e-23 101
MS.gene00961.t1 AT1G79820 26.981 467 261 14 36 485 41 444 1.55e-19 91.3
MS.gene00961.t1 AT3G51490 35.714 168 94 4 97 254 54 217 9.18e-19 90.1
MS.gene00961.t1 AT3G51490 27.523 218 134 5 275 479 502 708 5.82e-13 71.6
MS.gene00961.t1 AT3G51490 35.714 168 94 4 97 254 54 217 9.94e-19 89.7
MS.gene00961.t1 AT3G51490 28.899 218 139 5 275 479 502 716 9.35e-16 80.5
MS.gene00961.t1 AT3G51490 35.714 168 94 4 97 254 4 167 1.01e-18 89.7
MS.gene00961.t1 AT3G51490 28.899 218 139 5 275 479 452 666 8.51e-16 80.5
MS.gene00961.t1 AT1G20840 28.636 220 149 3 51 263 6 224 1.14e-18 89.7
MS.gene00961.t1 AT1G20840 26.728 217 143 3 276 479 502 715 3.26e-14 75.9
MS.gene00961.t1 AT1G20840 28.636 220 149 3 51 263 6 224 1.14e-18 89.7
MS.gene00961.t1 AT1G20840 26.728 217 143 3 276 479 502 715 3.26e-14 75.9
MS.gene00961.t1 AT4G35300 34.536 194 103 6 77 254 32 217 2.44e-18 88.6
MS.gene00961.t1 AT4G35300 29.358 218 138 4 275 479 498 712 2.54e-15 79.3
MS.gene00961.t1 AT4G35300 34.536 194 103 6 77 254 32 217 2.44e-18 88.6
MS.gene00961.t1 AT4G35300 29.358 218 138 4 275 479 498 712 2.54e-15 79.3
MS.gene00961.t1 AT4G35300 34.536 194 103 6 77 254 32 217 2.44e-18 88.6
MS.gene00961.t1 AT4G35300 29.358 218 138 4 275 479 498 712 2.54e-15 79.3
MS.gene00961.t1 AT4G35300 34.536 194 103 6 77 254 32 217 2.74e-18 88.6
MS.gene00961.t1 AT4G35300 29.358 218 138 4 275 479 508 722 2.95e-15 79.0
MS.gene00961.t1 AT4G35300 34.536 194 103 6 77 254 32 217 2.74e-18 88.6
MS.gene00961.t1 AT4G35300 29.358 218 138 4 275 479 508 722 2.95e-15 79.0
MS.gene00961.t1 AT4G35300 34.536 194 103 6 77 254 32 217 2.74e-18 88.6
MS.gene00961.t1 AT4G35300 29.358 218 138 4 275 479 508 722 2.95e-15 79.0
MS.gene00961.t1 AT4G35300 34.536 194 103 6 77 254 32 217 2.74e-18 88.6
MS.gene00961.t1 AT4G35300 29.358 218 138 4 275 479 508 722 2.95e-15 79.0
MS.gene00961.t1 AT4G35300 34.536 194 103 6 77 254 32 217 2.74e-18 88.6
MS.gene00961.t1 AT4G35300 29.358 218 138 4 275 479 508 722 2.95e-15 79.0
MS.gene00961.t1 AT4G35300 34.536 194 103 6 77 254 32 217 2.74e-18 88.6
MS.gene00961.t1 AT4G35300 29.358 218 138 4 275 479 508 722 2.95e-15 79.0
MS.gene00961.t1 AT4G35300 34.536 194 103 6 77 254 32 217 2.74e-18 88.6
MS.gene00961.t1 AT4G35300 29.358 218 138 4 275 479 508 722 2.95e-15 79.0
MS.gene00961.t1 AT1G54730 54.839 62 28 0 100 161 1 62 8.81e-17 75.1
MS.gene00961.t1 AT4G35300 29.358 218 138 4 275 479 311 525 1.75e-15 79.3
MS.gene00961.t1 AT1G79820 25.762 361 182 13 144 485 89 382 1.86e-15 78.6

Find 95 sgRNAs with CRISPR-Local

Find 313 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCAGCTTATGATTGTTAT+TGG 0.148748 2.3:-66581652 MS.gene00961:intron
CAAAACATTGGAAGAAATTC+AGG 0.233434 2.3:-66579294 MS.gene00961:CDS
TGCTGGAAGTTTGGTGGTTT+TGG 0.236584 2.3:-66579559 MS.gene00961:CDS
TGATGAAGCTAATGAAATTC+TGG 0.251682 2.3:-66581036 MS.gene00961:intron
TCAGATTGGAGTTGGATTAA+TGG 0.253920 2.3:-66580744 MS.gene00961:intron
TAATAGGAAGTCTCATAAAT+TGG 0.255488 2.3:-66581612 MS.gene00961:CDS
AAGAATTTCAACTAGCATTA+AGG 0.257869 2.3:-66581088 MS.gene00961:CDS
GCAGTTCCTTTCACATTTAT+CGG 0.267185 2.3:+66579579 None:intergenic
TCCAGACTTGTCCATCAAAA+TGG 0.279878 2.3:+66580197 None:intergenic
ATGGCTCCCAACATGGTAAA+TGG 0.286883 2.3:+66580216 None:intergenic
CCTTGCATTTGCTTGCTTGT+TGG 0.304574 2.3:-66581453 MS.gene00961:CDS
AGCACATTTGTTGCTGTTTG+TGG 0.330585 2.3:-66584662 MS.gene00961:CDS
CAACAATCTGTTGGAATTAA+CGG 0.335678 2.3:-66580716 MS.gene00961:CDS
TCAGATAAAAGTGTGGAAAA+TGG 0.337919 2.3:-66584707 MS.gene00961:CDS
GCTATTTCTGCTATATATAC+TGG 0.345158 2.3:+66581792 None:intergenic
TTGGGTTGGGATCAGTTCCT+TGG 0.348262 2.3:-66579715 MS.gene00961:CDS
TCTGCAAGTGGAACATTCTT+AGG 0.352381 2.3:-66580062 MS.gene00961:CDS
TAGGTTCCATTTACCATGTT+GGG 0.372499 2.3:-66580222 MS.gene00961:CDS
GTAAGTATTACTGTTATAAG+AGG 0.375329 2.3:+66580168 None:intergenic
TTCTTAGGCTGCTTTATAAC+CGG 0.380196 2.3:-66580047 MS.gene00961:CDS
CACCCACTCAAGCGGCTATC+AGG 0.386134 2.3:-66583543 MS.gene00961:CDS
TGGATCAGAATCAAAGCTTA+TGG 0.390013 2.3:-66579924 MS.gene00961:intron
GCTAGCTGTCTTCTTCTCTA+AGG 0.393869 2.3:-66582403 MS.gene00961:intron
TGGGTTGGGATCAGTTCCTT+GGG 0.394114 2.3:-66579714 MS.gene00961:CDS
CAGAGCGCACGTATTTGCTT+TGG 0.395261 2.3:+66580862 None:intergenic
ATTGAGGATGGAGAAACTAA+TGG 0.405911 2.3:-66584791 MS.gene00961:CDS
ATTAGCAGTTGCAGGTGTAT+TGG 0.415758 2.3:-66579884 MS.gene00961:intron
CTACAAATAGAATGGTTAAG+AGG 0.421225 2.3:+66579342 None:intergenic
TCATTCCTGAGTCTCCTAGA+TGG 0.424540 2.3:-66581422 MS.gene00961:CDS
TTGAGGATGGAGAAACTAAT+GGG 0.428281 2.3:-66584790 MS.gene00961:CDS
GAACAATTTCAGATTGGAGT+TGG 0.429941 2.3:-66580752 MS.gene00961:intron
GTGCCAACATTAGCAGTTGC+AGG 0.430412 2.3:-66579892 MS.gene00961:CDS
GAAAGGAACTGCTGGAAGTT+TGG 0.437546 2.3:-66579568 MS.gene00961:CDS
GTGACCATTGGTGCAATGCT+TGG 0.438418 2.3:-66582601 MS.gene00961:CDS
CTTATGAGTTGGAGTTCTCC+TGG 0.439978 2.3:-66579492 MS.gene00961:intron
ATGGCATTTCAACAATCTGT+TGG 0.440440 2.3:-66580725 MS.gene00961:CDS
CTGATATCATTGGCAGGAAA+GGG 0.440631 2.3:-66582555 MS.gene00961:CDS
TCCTTTCCTTGTTGAATGAA+AGG 0.450559 2.3:+66584749 None:intergenic
AGGACTTGCAACAACAAATC+AGG 0.474061 2.3:-66581751 MS.gene00961:intron
AAGGATGCTTGTAAAGAAGT+TGG 0.476415 2.3:-66584731 MS.gene00961:CDS
AACTAGCATTAAGGAAACTA+CGG 0.476801 2.3:-66581079 MS.gene00961:CDS
TTTGGTTCTTTGGTGACCAT+TGG 0.481812 2.3:-66582613 MS.gene00961:CDS
ATCAAAGCTTATGGCTTGAG+TGG 0.485093 2.3:-66579915 MS.gene00961:CDS
AATGACAATTGAGCAGCATA+AGG 0.485697 2.3:-66584816 MS.gene00961:CDS
GAGTTCTTACACACTTGACT+TGG 0.485780 2.3:-66582283 MS.gene00961:CDS
GCAAGCAAATGCAAGGAACT+AGG 0.487157 2.3:+66581460 None:intergenic
AGTGTGGAAAATGGATCCAT+TGG 0.491014 2.3:-66584698 MS.gene00961:CDS
TGGTAGCGTGGCTAGGAGCT+TGG 0.495651 2.3:-66579539 MS.gene00961:CDS
CATAGCTTATGCATGTATAC+AGG 0.497491 2.3:-66580329 MS.gene00961:intron
TCCTGAGTCTCCTAGATGGC+TGG 0.502043 2.3:-66581418 MS.gene00961:intron
AGCTCCAAGCATTGCACCAA+TGG 0.502584 2.3:+66582597 None:intergenic
ATAAATGTGAAAGGAACTGC+TGG 0.512457 2.3:-66579576 MS.gene00961:CDS
CAAGAACCTTTCATTCAACA+AGG 0.516918 2.3:-66584755 MS.gene00961:CDS
TCCTTCCTTACCAGCCATCT+AGG 0.519483 2.3:+66581408 None:intergenic
GCTCATTCTCTAAGAACTGA+TGG 0.520405 2.3:+66579268 None:intergenic
ATAGGTTCCATTTACCATGT+TGG 0.521078 2.3:-66580223 MS.gene00961:intron
ACTAGCATTAAGGAAACTAC+GGG 0.523883 2.3:-66581078 MS.gene00961:CDS
GGTCGAGTTACTGATATCAT+TGG 0.527994 2.3:-66582565 MS.gene00961:CDS
ACCTTTCATTCAACAAGGAA+AGG 0.530081 2.3:-66584750 MS.gene00961:CDS
GGGCTTTCTTCAGCAAAAGC+TGG 0.531999 2.3:-66580355 MS.gene00961:CDS
CTTACACACTTGACTTGGGA+AGG 0.536358 2.3:-66582278 MS.gene00961:CDS
TGAGCAGCATAAGGATATTG+AGG 0.536915 2.3:-66584807 MS.gene00961:CDS
TACAAATAGAATGGTTAAGA+GGG 0.541695 2.3:+66579343 None:intergenic
ACTGATATCATTGGCAGGAA+AGG 0.545701 2.3:-66582556 MS.gene00961:CDS
ACCAGCCATCTAGGAGACTC+AGG 0.545779 2.3:+66581417 None:intergenic
TCTGTTGGAATTAACGGCAT+AGG 0.553442 2.3:-66580710 MS.gene00961:CDS
CAGCATAAGGATATTGAGGA+TGG 0.555700 2.3:-66584803 MS.gene00961:CDS
TGGCGACAACTAGCTCTAGC+AGG 0.561924 2.3:-66581592 MS.gene00961:intron
CTGTATACATGCATAAGCTA+TGG 0.562149 2.3:+66580330 None:intergenic
CATCAAAATGGCTCCCAACA+TGG 0.563798 2.3:+66580209 None:intergenic
GACCTGATAGCCGCTTGAGT+GGG 0.574441 2.3:+66583541 None:intergenic
ACACCTGCAACTGCTAATGT+TGG 0.582284 2.3:+66579889 None:intergenic
GAGTTACTGATATCATTGGC+AGG 0.583613 2.3:-66582561 MS.gene00961:CDS
AGAAACCAAAGGCAAAACAT+TGG 0.583752 2.3:-66579306 MS.gene00961:CDS
AGTTCTTACACACTTGACTT+GGG 0.588739 2.3:-66582282 MS.gene00961:CDS
AGGAACTGCTGGAAGTTTGG+TGG 0.588904 2.3:-66579565 MS.gene00961:CDS
TAATTTCAGGTCTCTGCAAG+TGG 0.589919 2.3:-66580074 MS.gene00961:intron
TCCTATGATACAAAATCCTG+TGG 0.593679 2.3:+66582428 None:intergenic
AATTGGAGTTATCTCATATG+TGG 0.595991 2.3:-66582238 MS.gene00961:intron
AGACCTGATAGCCGCTTGAG+TGG 0.599979 2.3:+66583540 None:intergenic
TCAAAGCTTATGGCTTGAGT+GGG 0.616539 2.3:-66579914 MS.gene00961:CDS
CCAACAAGCAAGCAAATGCA+AGG 0.620888 2.3:+66581453 None:intergenic
GTGTTTCCGATAAATGTGAA+AGG 0.633214 2.3:-66579585 MS.gene00961:CDS
CAGGCTATGAGAATTTCCAC+AGG 0.633545 2.3:-66582444 MS.gene00961:CDS
ACCTCAGACATCATCACCCA+AGG 0.633561 2.3:+66579698 None:intergenic
AGTTGGATCAGATAAAAGTG+TGG 0.634652 2.3:-66584714 MS.gene00961:CDS
TTATTCAGCACCCACTCAAG+CGG 0.639807 2.3:-66583551 MS.gene00961:CDS
ATGCTTGGAGCTATAACAAG+TGG 0.646646 2.3:-66582586 MS.gene00961:CDS
GCTAAGCAGAACCATTCCAA+TGG 0.646752 2.3:+66584682 None:intergenic
TGATATCATTGGCAGGAAAG+GGG 0.647485 2.3:-66582554 MS.gene00961:intron
AAAGTAGTCCCAGAAACCAA+AGG 0.659062 2.3:-66579317 MS.gene00961:CDS
GGAAAATGGATCCATTGGAA+TGG 0.671020 2.3:-66584693 MS.gene00961:CDS
TCTTAATCTATCTCTTGCTG+AGG 0.689216 2.3:-66583515 MS.gene00961:intron
TCCTTGGGTGATGATGTCTG+AGG 0.717844 2.3:-66579699 MS.gene00961:intron
CTAGCATTAAGGAAACTACG+GGG 0.788030 2.3:-66581077 MS.gene00961:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATATAATAATGACAATA+AGG + chr2.3:66580626-66580645 None:intergenic 10.0%
!! ATCAATTAAAAAAAATACTA+TGG + chr2.3:66583113-66583132 None:intergenic 10.0%
!! TTAGAAATATTATAATAAAG+AGG + chr2.3:66582254-66582273 None:intergenic 10.0%
!! TTATCAATAAGAATTTAAAT+TGG + chr2.3:66580318-66580337 None:intergenic 10.0%
!!! AAAATTAATTTTAACATGTA+TGG - chr2.3:66581962-66581981 MS.gene00961:intron 10.0%
!!! AGATTTTTGTAAATTATTAT+TGG - chr2.3:66579486-66579505 MS.gene00961:intron 10.0%
!!! ATTTAAAACTAATGTTATTA+TGG + chr2.3:66582531-66582550 None:intergenic 10.0%
!!! TCTAAGAATAAAATTTTAAA+TGG + chr2.3:66581599-66581618 None:intergenic 10.0%
!!! TTTTTTTATGCAATAATTTA+AGG + chr2.3:66581308-66581327 None:intergenic 10.0%
!! AAAAAGTTGTTACATAATAA+AGG - chr2.3:66583667-66583686 MS.gene00961:intron 15.0%
!! AAAAGTTGTTACATAATAAA+GGG - chr2.3:66583668-66583687 MS.gene00961:intron 15.0%
!! AAATGTATTAAGTACTATAA+TGG + chr2.3:66583642-66583661 None:intergenic 15.0%
!! AATAATTGTTGTATAATTTC+AGG - chr2.3:66584005-66584024 MS.gene00961:intron 15.0%
!! AATTAATCAATGAAGAAATT+TGG - chr2.3:66583548-66583567 MS.gene00961:CDS 15.0%
!! CAACTTAATTACATTTAAAT+TGG - chr2.3:66579807-66579826 MS.gene00961:intron 15.0%
!! GAAATTATACAACAATTATT+TGG + chr2.3:66584005-66584024 None:intergenic 15.0%
!! GACAAAAAAATTTAGTTATA+TGG + chr2.3:66583824-66583843 None:intergenic 15.0%
!! TTTAAATGGAAAGAATATTA+AGG + chr2.3:66581585-66581604 None:intergenic 15.0%
!!! AAAATTGATTTTGAATGAAT+TGG + chr2.3:66582154-66582173 None:intergenic 15.0%
!!! AATAGGTTAAACTTTAAAAT+TGG - chr2.3:66581073-66581092 MS.gene00961:CDS 15.0%
!!! AATTTGAAATTTTTAGTTCT+AGG - chr2.3:66582022-66582041 MS.gene00961:intron 15.0%
!!! ATTTCTACATAATATGTTTT+GGG - chr2.3:66581438-66581457 MS.gene00961:CDS 15.0%
!!! CATTATTCTTATTCTTTTAT+AGG + chr2.3:66582924-66582943 None:intergenic 15.0%
!!! GATTTTGTTTATTTTTCTTT+TGG - chr2.3:66580002-66580021 MS.gene00961:intron 15.0%
!!! TATTTCTACATAATATGTTT+TGG - chr2.3:66581437-66581456 MS.gene00961:CDS 15.0%
!!! TATTTGTTACATTGAATAAT+AGG - chr2.3:66583851-66583870 MS.gene00961:intron 15.0%
!!! TATTTTTATTCAATCATGTT+TGG - chr2.3:66581912-66581931 MS.gene00961:intron 15.0%
!! AAAGAATAAGAATAATGTGT+CGG - chr2.3:66582927-66582946 MS.gene00961:intron 20.0%
!! AAAGTACAGAATTTGTAAAT+TGG - chr2.3:66581259-66581278 MS.gene00961:intron 20.0%
!! AAGGATATAACAAATTAAGA+AGG - chr2.3:66582560-66582579 MS.gene00961:CDS 20.0%
!! AATATGTCAAAAATAGATGT+AGG + chr2.3:66580981-66581000 None:intergenic 20.0%
!! ACAACATGATTAAACTTAAA+TGG - chr2.3:66579748-66579767 MS.gene00961:intron 20.0%
!! AGTAAAGTAAGCATTTAAAT+AGG - chr2.3:66581056-66581075 MS.gene00961:CDS 20.0%
!! GAAATTGTTCTATATAGTTT+AGG + chr2.3:66583330-66583349 None:intergenic 20.0%
!! GTATTAAATTTGTGAACAAT+TGG - chr2.3:66583576-66583595 MS.gene00961:intron 20.0%
!! TATATAGAACAATTTCAGAT+TGG - chr2.3:66583334-66583353 MS.gene00961:intron 20.0%
!!! AAATTATGCACAATTTTTTC+AGG - chr2.3:66582963-66582982 MS.gene00961:intron 20.0%
!!! AATTGAAATTTTGATTTGCA+GGG - chr2.3:66583717-66583736 MS.gene00961:intron 20.0%
!!! AGAAAATATGAGATATTTTC+AGG + chr2.3:66584323-66584342 None:intergenic 20.0%
!!! TACTAATTGTATTGTTTTTG+TGG - chr2.3:66584695-66584714 MS.gene00961:CDS 20.0%
!!! TATTCTTAGAAGTAACATTT+TGG - chr2.3:66581609-66581628 MS.gene00961:CDS 20.0%
!!! TCATCAATGTCATTTTTAAT+AGG - chr2.3:66582464-66582483 MS.gene00961:intron 20.0%
!!! TTTATTTTTCTTTTGGTGTA+TGG - chr2.3:66580009-66580028 MS.gene00961:intron 20.0%
!!! TTTCTACATAATATGTTTTG+GGG - chr2.3:66581439-66581458 MS.gene00961:CDS 20.0%
! AAAAAAAAGTCTAGCTACAT+GGG + chr2.3:66581146-66581165 None:intergenic 25.0%
! AAGAATTTCAACTAGCATTA+AGG - chr2.3:66583004-66583023 MS.gene00961:intron 25.0%
! AATAACATGTAATGTAGGTT+AGG + chr2.3:66580814-66580833 None:intergenic 25.0%
! AATCTGTTTGATTACTCTAA+AGG - chr2.3:66583302-66583321 MS.gene00961:intron 25.0%
! ATCTGTTTGATTACTCTAAA+GGG - chr2.3:66583303-66583322 MS.gene00961:intron 25.0%
! CTCATCTTTATGATTTCAAA+TGG - chr2.3:66584148-66584167 MS.gene00961:intron 25.0%
! CTGTTACAACAGATAAAATA+AGG + chr2.3:66580117-66580136 None:intergenic 25.0%
! CTTCTTAAGTATCATTGAAT+TGG - chr2.3:66582393-66582412 MS.gene00961:intron 25.0%
! CTTTCAATAACATGTAATGT+AGG + chr2.3:66580819-66580838 None:intergenic 25.0%
! GCAAATTTCTCTTTCTTAAA+TGG + chr2.3:66583620-66583639 None:intergenic 25.0%
! GTAAGTATTACTGTTATAAG+AGG + chr2.3:66583927-66583946 None:intergenic 25.0%
! TAAAAAAAAGTCTAGCTACA+TGG + chr2.3:66581147-66581166 None:intergenic 25.0%
! TAAATATAGTACTCTGTTGA+CGG - chr2.3:66583515-66583534 MS.gene00961:intron 25.0%
! TAAGTGTATTGAATGTAAGA+TGG + chr2.3:66582108-66582127 None:intergenic 25.0%
! TAATAGGAAGTCTCATAAAT+TGG - chr2.3:66582480-66582499 MS.gene00961:intron 25.0%
! TAATCAATGAAGAAATTTGG+TGG - chr2.3:66583551-66583570 MS.gene00961:CDS 25.0%
! TACAAATAGAATGGTTAAGA+GGG + chr2.3:66584752-66584771 None:intergenic 25.0%
! TAGTTTATATGCGAAAAGTT+TGG - chr2.3:66582784-66582803 MS.gene00961:intron 25.0%
! TCTAACAAAAATCAGCATAA+CGG - chr2.3:66582269-66582288 MS.gene00961:CDS 25.0%
! TGATTTGAAAGGTAAATTCA+AGG + chr2.3:66582060-66582079 None:intergenic 25.0%
! TGGATAATTATATGAGAAAC+AGG - chr2.3:66581629-66581648 MS.gene00961:CDS 25.0%
! TTTCCTGAGAAATGATTAAA+GGG + chr2.3:66583797-66583816 None:intergenic 25.0%
!! AAATCCAAAAACTTAGTCTT+AGG + chr2.3:66583207-66583226 None:intergenic 25.0%
!! AGCTAAACCATTACAATTTT+TGG + chr2.3:66584441-66584460 None:intergenic 25.0%
!! CATCATATTTGTTGATAAGT+GGG - chr2.3:66580696-66580715 MS.gene00961:CDS 25.0%
!! CGATTAAAAACAAGTCATTT+TGG + chr2.3:66579660-66579679 None:intergenic 25.0%
!! CTTTCAATTTTCTTATGAGT+TGG - chr2.3:66584589-66584608 MS.gene00961:intron 25.0%
!! GTTAGAGAGTACAAAATTTA+TGG + chr2.3:66581286-66581305 None:intergenic 25.0%
!! TACTTTTGCTACAAATAGAA+TGG + chr2.3:66584761-66584780 None:intergenic 25.0%
!! TCAACAGAGTACTATATTTA+GGG + chr2.3:66583515-66583534 None:intergenic 25.0%
!! TCATCATATTTGTTGATAAG+TGG - chr2.3:66580695-66580714 MS.gene00961:CDS 25.0%
!! TTATTGATAAAGTGTTCGTA+AGG - chr2.3:66580328-66580347 MS.gene00961:intron 25.0%
!! TTTTATTCAATCATGTTTGG+AGG - chr2.3:66581915-66581934 MS.gene00961:intron 25.0%
!!! AAAAGTACTTTTCTTATTGC+AGG - chr2.3:66584485-66584504 MS.gene00961:intron 25.0%
!!! ACTAGGCTGTAAATATTTTT+TGG + chr2.3:66579909-66579928 None:intergenic 25.0%
!!! AGTTTTAAATTTTTGCTCGA+AGG - chr2.3:66582541-66582560 MS.gene00961:intron 25.0%
!!! CAATTGAAATTTTGATTTGC+AGG - chr2.3:66583716-66583735 MS.gene00961:intron 25.0%
AAACATTTCAACCATGTGAT+TGG + chr2.3:66579704-66579723 None:intergenic 30.0%
AACTAGCATTAAGGAAACTA+CGG - chr2.3:66583013-66583032 MS.gene00961:intron 30.0%
AAGCAAAATTGAGTTCAGAT+AGG + chr2.3:66583153-66583172 None:intergenic 30.0%
AATACGTGTCATAGATTCAT+AGG + chr2.3:66581099-66581118 None:intergenic 30.0%
AATTGGAGTTATCTCATATG+TGG - chr2.3:66581854-66581873 MS.gene00961:intron 30.0%
AATTGGATAAGTGTTTGCAA+TGG - chr2.3:66579824-66579843 MS.gene00961:intron 30.0%
AGCAAAATTGAGTTCAGATA+GGG + chr2.3:66583152-66583171 None:intergenic 30.0%
ATAGCACCAAAAAATCTTAG+AGG - chr2.3:66582318-66582337 MS.gene00961:intron 30.0%
ATGAATCTATGACACGTATT+AGG - chr2.3:66581099-66581118 MS.gene00961:CDS 30.0%
ATGAGTGTATCAAGAAGAAT+AGG - chr2.3:66580762-66580781 MS.gene00961:intron 30.0%
ATTGGATAAGTGTTTGCAAT+GGG - chr2.3:66579825-66579844 MS.gene00961:intron 30.0%
CAAAACATTGGAAGAAATTC+AGG - chr2.3:66584798-66584817 MS.gene00961:CDS 30.0%
CAACAATCTGTTGGAATTAA+CGG - chr2.3:66583376-66583395 MS.gene00961:intron 30.0%
CAATCAGTATGTGTTTAGTT+TGG + chr2.3:66582190-66582209 None:intergenic 30.0%
CACAACACCAAAAATTGTAA+TGG - chr2.3:66584431-66584450 MS.gene00961:intron 30.0%
CATTCATCAAGTGATTTGAA+AGG + chr2.3:66582071-66582090 None:intergenic 30.0%
CTACAAATAGAATGGTTAAG+AGG + chr2.3:66584753-66584772 None:intergenic 30.0%
CTTGATCAGTTAAGAAAGTT+TGG + chr2.3:66583088-66583107 None:intergenic 30.0%
GTTTCCTGAGAAATGATTAA+AGG + chr2.3:66583798-66583817 None:intergenic 30.0%
TGATGAAGCTAATGAAATTC+TGG - chr2.3:66583056-66583075 MS.gene00961:intron 30.0%
TGATTATGTGCTTAATTACC+AGG + chr2.3:66584621-66584640 None:intergenic 30.0%
TGTATATCACTATCCATTAC+CGG - chr2.3:66581233-66581252 MS.gene00961:intron 30.0%
TTGCAGCTTATGATTGTTAT+TGG - chr2.3:66582440-66582459 MS.gene00961:CDS 30.0%
! AATGAAATACATGCTGATTG+TGG - chr2.3:66583445-66583464 MS.gene00961:intron 30.0%
! ACATAGCAGCATTTTCAATT+GGG - chr2.3:66584359-66584378 MS.gene00961:intron 30.0%
! ATCCTTCGATTTTCACATAA+AGG - chr2.3:66579552-66579571 MS.gene00961:CDS 30.0%
! CTAGTTTCTATTTTGTGATC+AGG - chr2.3:66580514-66580533 MS.gene00961:intron 30.0%
! CTCATTCATACAATGTGTTT+TGG + chr2.3:66580218-66580237 None:intergenic 30.0%
! CTGAACTCAATTTTGCTTAT+AGG - chr2.3:66583155-66583174 MS.gene00961:intron 30.0%
! GTCAACAGAGTACTATATTT+AGG + chr2.3:66583516-66583535 None:intergenic 30.0%
! TACATAGCAGCATTTTCAAT+TGG - chr2.3:66584358-66584377 MS.gene00961:intron 30.0%
! TCAGATAAAAGTGTGGAAAA+TGG - chr2.3:66579385-66579404 MS.gene00961:intron 30.0%
! TGGTTCTCTGAAAATGATTA+TGG + chr2.3:66582134-66582153 None:intergenic 30.0%
! TTACATAATAAAGGGTATGC+TGG - chr2.3:66583676-66583695 MS.gene00961:intron 30.0%
! TTTCTATTTTGTGATCAGGT+GGG - chr2.3:66580518-66580537 MS.gene00961:intron 30.0%
! TTTTTCACAGGATATGGAAT+TGG - chr2.3:66581837-66581856 MS.gene00961:intron 30.0%
!! ACTCTTGATTTGATTTTGCT+TGG - chr2.3:66582593-66582612 MS.gene00961:CDS 30.0%
!! GCTATTTCTGCTATATATAC+TGG + chr2.3:66582303-66582322 None:intergenic 30.0%
!! GTTTGTGGTTCTTTTTCATT+TGG - chr2.3:66579445-66579464 MS.gene00961:intron 30.0%
!!! ACATAATATGTTTTGGGGAT+TGG - chr2.3:66581444-66581463 MS.gene00961:CDS 30.0%
!!! AGGCTGTAAATATTTTTTGG+AGG + chr2.3:66579906-66579925 None:intergenic 30.0%
!!! ATACAATGTGTTTTGGAAAG+GGG + chr2.3:66580211-66580230 None:intergenic 30.0%
!!! ATTGTATTGTTTTTGTGGAC+AGG - chr2.3:66584700-66584719 MS.gene00961:CDS 30.0%
!!! CATACAATGTGTTTTGGAAA+GGG + chr2.3:66580212-66580231 None:intergenic 30.0%
!!! GTTTTCAATGTTTGGTTCTT+TGG - chr2.3:66581469-66581488 MS.gene00961:intron 30.0%
!!! TCATACAATGTGTTTTGGAA+AGG + chr2.3:66580213-66580232 None:intergenic 30.0%
AAACTAACACATGCAAACCA+GGG + chr2.3:66580286-66580305 None:intergenic 35.0%
AAAGGACACAGCAGAAAAAA+AGG + chr2.3:66580061-66580080 None:intergenic 35.0%
AAGGATGCTTGTAAAGAAGT+TGG - chr2.3:66579361-66579380 MS.gene00961:CDS 35.0%
ACAAATTCTGTACTTTACCC+CGG + chr2.3:66581255-66581274 None:intergenic 35.0%
ACCTTTCATTCAACAAGGAA+AGG - chr2.3:66579342-66579361 MS.gene00961:CDS 35.0%
ACTAGCATTAAGGAAACTAC+GGG - chr2.3:66583014-66583033 MS.gene00961:intron 35.0%
AGAAACCAAAGGCAAAACAT+TGG - chr2.3:66584786-66584805 MS.gene00961:CDS 35.0%
AGTTCTTACACACTTGACTT+GGG - chr2.3:66581810-66581829 MS.gene00961:intron 35.0%
AGTTGGATCAGATAAAAGTG+TGG - chr2.3:66579378-66579397 MS.gene00961:intron 35.0%
ATAAATGTGAAAGGAACTGC+TGG - chr2.3:66584516-66584535 MS.gene00961:intron 35.0%
ATAGGAACTGGTATGTTAGT+GGG + chr2.3:66579936-66579955 None:intergenic 35.0%
ATAGGTTCCATTTACCATGT+TGG - chr2.3:66583869-66583888 MS.gene00961:intron 35.0%
ATGGCATTTCAACAATCTGT+TGG - chr2.3:66583367-66583386 MS.gene00961:intron 35.0%
ATTGAGGATGGAGAAACTAA+TGG - chr2.3:66579301-66579320 MS.gene00961:CDS 35.0%
CAAGAACCTTTCATTCAACA+AGG - chr2.3:66579337-66579356 MS.gene00961:CDS 35.0%
CATAGCTTATGCATGTATAC+AGG - chr2.3:66583763-66583782 MS.gene00961:intron 35.0%
CTGTATACATGCATAAGCTA+TGG + chr2.3:66583765-66583784 None:intergenic 35.0%
GAACAATTTCAGATTGGAGT+TGG - chr2.3:66583340-66583359 MS.gene00961:intron 35.0%
GATCCCTTTAATCATTTCTC+AGG - chr2.3:66583791-66583810 MS.gene00961:intron 35.0%
GCAAAGGGAATGAGAAATTT+AGG - chr2.3:66583974-66583993 MS.gene00961:intron 35.0%
GCAGTTCCTTTCACATTTAT+CGG + chr2.3:66584516-66584535 None:intergenic 35.0%
GTATATCACTATCCATTACC+GGG - chr2.3:66581234-66581253 MS.gene00961:intron 35.0%
GTCCTTTATGTGAAAATCGA+AGG + chr2.3:66579557-66579576 None:intergenic 35.0%
GTGTTTCCGATAAATGTGAA+AGG - chr2.3:66584507-66584526 MS.gene00961:intron 35.0%
TAAACTAACACATGCAAACC+AGG + chr2.3:66580287-66580306 None:intergenic 35.0%
TACTATACCAAAGCAAACAG+CGG + chr2.3:66580085-66580104 None:intergenic 35.0%
TAGACTTGCCTTGAAAAAGA+AGG + chr2.3:66584076-66584095 None:intergenic 35.0%
TAGGTTCCATTTACCATGTT+GGG - chr2.3:66583870-66583889 MS.gene00961:intron 35.0%
TATATCACTATCCATTACCG+GGG - chr2.3:66581235-66581254 MS.gene00961:intron 35.0%
TCAGATTGGAGTTGGATTAA+TGG - chr2.3:66583348-66583367 MS.gene00961:intron 35.0%
TCCTATGATACAAAATCCTG+TGG + chr2.3:66581667-66581686 None:intergenic 35.0%
TCCTTTCCTTGTTGAATGAA+AGG + chr2.3:66579346-66579365 None:intergenic 35.0%
TCTTAATCTATCTCTTGCTG+AGG - chr2.3:66580577-66580596 MS.gene00961:intron 35.0%
TGGATCAGAATCAAAGCTTA+TGG - chr2.3:66584168-66584187 MS.gene00961:intron 35.0%
TTATCATCTTACCGAACTCT+AGG + chr2.3:66579588-66579607 None:intergenic 35.0%
TTGAGGATGGAGAAACTAAT+GGG - chr2.3:66579302-66579321 MS.gene00961:CDS 35.0%
! AATGAGCCTCATTTTACTTC+CGG - chr2.3:66580232-66580251 MS.gene00961:intron 35.0%
! CAGAGTACTATATTTAGGGA+CGG + chr2.3:66583511-66583530 None:intergenic 35.0%
! CAGGATTTTGTATCATAGGA+TGG - chr2.3:66581667-66581686 MS.gene00961:intron 35.0%
! CCTTCCTAAGACTAAGTTTT+TGG - chr2.3:66583200-66583219 MS.gene00961:intron 35.0%
! GACTTTGATAACCTAGAGTT+CGG - chr2.3:66579574-66579593 MS.gene00961:CDS 35.0%
! GATTGGCAGTTTTCAATGTT+TGG - chr2.3:66581461-66581480 MS.gene00961:CDS 35.0%
! GTTTCTATTTTGTGATCAGG+TGG - chr2.3:66580517-66580536 MS.gene00961:intron 35.0%
! TCCACAGGATTTTGTATCAT+AGG - chr2.3:66581663-66581682 MS.gene00961:intron 35.0%
! TTCTTAGGCTGCTTTATAAC+CGG - chr2.3:66584045-66584064 MS.gene00961:intron 35.0%
! TTCTTCCAATGTTTTGCCTT+TGG + chr2.3:66584794-66584813 None:intergenic 35.0%
!! AAAAATCAGCATAACGGATC+AGG - chr2.3:66582275-66582294 MS.gene00961:CDS 35.0%
!! AATGTTTTGCCTTTGGTTTC+TGG + chr2.3:66584787-66584806 None:intergenic 35.0%
!! ATGTTTTGCCTTTGGTTTCT+GGG + chr2.3:66584786-66584805 None:intergenic 35.0%
!! CCAAAAACTTAGTCTTAGGA+AGG + chr2.3:66583203-66583222 None:intergenic 35.0%
!! GGTACTATGTTTTTGTATGC+TGG - chr2.3:66584721-66584740 MS.gene00961:CDS 35.0%
!! TCTTTTGGTGTATGGCTTTT+TGG - chr2.3:66580017-66580036 MS.gene00961:intron 35.0%
!! TGCATGCAGTGTTACTTAAT+TGG - chr2.3:66582208-66582227 MS.gene00961:intron 35.0%
!! TTGATTTGATTTTGCTTGGC+TGG - chr2.3:66582597-66582616 MS.gene00961:CDS 35.0%
!!! AGTCCTCCTCTAAGATTTTT+TGG + chr2.3:66582327-66582346 None:intergenic 35.0%
!!! CAATTTTTTCAGGCAAAGGT+TGG - chr2.3:66582973-66582992 MS.gene00961:intron 35.0%
!!! TGCACAATTTTTTCAGGCAA+AGG - chr2.3:66582969-66582988 MS.gene00961:intron 35.0%
!!! TGTTGCTGTTTCGGTATTTT+GGG - chr2.3:66579976-66579995 MS.gene00961:intron 35.0%
AAAGCATGCTACAACAGCAT+AGG + chr2.3:66579954-66579973 None:intergenic 40.0%
AAAGTAGTCCCAGAAACCAA+AGG - chr2.3:66584775-66584794 MS.gene00961:CDS 40.0%
ACTCTGTTGACGGAATTACT+TGG - chr2.3:66583525-66583544 MS.gene00961:CDS 40.0%
ACTGATATCATTGGCAGGAA+AGG - chr2.3:66581536-66581555 MS.gene00961:intron 40.0%
ACTGTATCAACCATGCAAAG+AGG + chr2.3:66584265-66584284 None:intergenic 40.0%
AGGACTTGCAACAACAAATC+AGG - chr2.3:66582341-66582360 MS.gene00961:intron 40.0%
AGGAGGAGATTCAAGAATTG+AGG + chr2.3:66584245-66584264 None:intergenic 40.0%
AGTGTGGAAAATGGATCCAT+TGG - chr2.3:66579394-66579413 MS.gene00961:intron 40.0%
ATCAAAGCTTATGGCTTGAG+TGG - chr2.3:66584177-66584196 MS.gene00961:intron 40.0%
ATGCTTGGAGCTATAACAAG+TGG - chr2.3:66581506-66581525 MS.gene00961:intron 40.0%
ATTAGCAGTTGCAGGTGTAT+TGG - chr2.3:66584208-66584227 MS.gene00961:intron 40.0%
CAACTACATCTGCATGCAAA+GGG - chr2.3:66583959-66583978 MS.gene00961:intron 40.0%
CAGCATAAGGATATTGAGGA+TGG - chr2.3:66579289-66579308 MS.gene00961:CDS 40.0%
CATAGGAACTGGTATGTTAG+TGG + chr2.3:66579937-66579956 None:intergenic 40.0%
CTAGCATTAAGGAAACTACG+GGG - chr2.3:66583015-66583034 MS.gene00961:intron 40.0%
CTGATATCATTGGCAGGAAA+GGG - chr2.3:66581537-66581556 MS.gene00961:intron 40.0%
CTTGAAAAAGAAGGCAACTC+CGG + chr2.3:66584067-66584086 None:intergenic 40.0%
GAGTTACTGATATCATTGGC+AGG - chr2.3:66581531-66581550 MS.gene00961:intron 40.0%
GAGTTCTTACACACTTGACT+TGG - chr2.3:66581809-66581828 MS.gene00961:intron 40.0%
GCACCAAAAAATCTTAGAGG+AGG - chr2.3:66582321-66582340 MS.gene00961:intron 40.0%
GCTGTTTGCTTTGGTATAGT+AGG - chr2.3:66580084-66580103 MS.gene00961:intron 40.0%
GGAAAATGGATCCATTGGAA+TGG - chr2.3:66579399-66579418 MS.gene00961:intron 40.0%
GGTCGAGTTACTGATATCAT+TGG - chr2.3:66581527-66581546 MS.gene00961:intron 40.0%
TAGGAACTGGTATGTTAGTG+GGG + chr2.3:66579935-66579954 None:intergenic 40.0%
TCAAAGCTTATGGCTTGAGT+GGG - chr2.3:66584178-66584197 MS.gene00961:intron 40.0%
TCAACTACATCTGCATGCAA+AGG - chr2.3:66583958-66583977 MS.gene00961:intron 40.0%
TCCAGACTTGTCCATCAAAA+TGG + chr2.3:66583898-66583917 None:intergenic 40.0%
TCTGCAAGTGGAACATTCTT+AGG - chr2.3:66584030-66584049 MS.gene00961:intron 40.0%
TCTGTTGGAATTAACGGCAT+AGG - chr2.3:66583382-66583401 MS.gene00961:intron 40.0%
TGAGCAGCATAAGGATATTG+AGG - chr2.3:66579285-66579304 MS.gene00961:CDS 40.0%
TGATATCATTGGCAGGAAAG+GGG - chr2.3:66581538-66581557 MS.gene00961:intron 40.0%
TTCAACCATGTGATTGGACT+CGG + chr2.3:66579698-66579717 None:intergenic 40.0%
TTGCAACAACAAATCAGGTG+AGG - chr2.3:66582346-66582365 MS.gene00961:intron 40.0%
TTGCTTTGGTATAGTAGGCT+GGG - chr2.3:66580089-66580108 MS.gene00961:intron 40.0%
TTTGCTTTGGTATAGTAGGC+TGG - chr2.3:66580088-66580107 MS.gene00961:intron 40.0%
! AGCAGCATTTTCAATTGGGT+TGG - chr2.3:66584363-66584382 MS.gene00961:intron 40.0%
! GCAGCATTTTCAATTGGGTT+GGG - chr2.3:66584364-66584383 MS.gene00961:intron 40.0%
! GGAAGGTTTTTCACAGGATA+TGG - chr2.3:66581831-66581850 MS.gene00961:intron 40.0%
! TAATTTCAGGTCTCTGCAAG+TGG - chr2.3:66584018-66584037 MS.gene00961:intron 40.0%
! TTTGGTTTCTTTCCTGTTGC+TGG - chr2.3:66580035-66580054 MS.gene00961:CDS 40.0%
!! AGCACATTTGTTGCTGTTTG+TGG - chr2.3:66579430-66579449 MS.gene00961:intron 40.0%
!! ATGCTTTGCTGTTGCTGTTT+CGG - chr2.3:66579967-66579986 MS.gene00961:intron 40.0%
!! TTTGGTTCTTTGGTGACCAT+TGG - chr2.3:66581479-66581498 MS.gene00961:intron 40.0%
!!! CTGTTGCTGTTTCGGTATTT+TGG - chr2.3:66579975-66579994 MS.gene00961:intron 40.0%
ACACCTGCAACTGCTAATGT+TGG + chr2.3:66584206-66584225 None:intergenic 45.0%
AGCCTCCAAATTCGTTGGAA+CGG - chr2.3:66580260-66580279 MS.gene00961:intron 45.0%
AGGAACTGGTATGTTAGTGG+GGG + chr2.3:66579934-66579953 None:intergenic 45.0%
ATAGGCTAGACAGACTCACA+TGG - chr2.3:66580780-66580799 MS.gene00961:intron 45.0%
ATGGCTCCCAACATGGTAAA+TGG + chr2.3:66583879-66583898 None:intergenic 45.0%
CAGAAAAAAAGGCCAGCAAC+AGG + chr2.3:66580050-66580069 None:intergenic 45.0%
CAGGCTATGAGAATTTCCAC+AGG - chr2.3:66581648-66581667 MS.gene00961:CDS 45.0%
CATCAAAATGGCTCCCAACA+TGG + chr2.3:66583886-66583905 None:intergenic 45.0%
CCAACAAGCAAGCAAATGCA+AGG + chr2.3:66582642-66582661 None:intergenic 45.0%
CCTTGCATTTGCTTGCTTGT+TGG - chr2.3:66582639-66582658 MS.gene00961:intron 45.0%
GAAAGGAACTGCTGGAAGTT+TGG - chr2.3:66584524-66584543 MS.gene00961:intron 45.0%
GATAAGTGTTTGCAATGGGC+CGG - chr2.3:66579829-66579848 MS.gene00961:intron 45.0%
GCAAGCAAATGCAAGGAACT+AGG + chr2.3:66582635-66582654 None:intergenic 45.0%
GCTAAGCAGAACCATTCCAA+TGG + chr2.3:66579413-66579432 None:intergenic 45.0%
GCTAGCTGTCTTCTTCTCTA+AGG - chr2.3:66581689-66581708 MS.gene00961:intron 45.0%
GTATCAACCATGCAAAGAGG+AGG + chr2.3:66584262-66584281 None:intergenic 45.0%
TCATTCCTGAGTCTCCTAGA+TGG - chr2.3:66582670-66582689 MS.gene00961:intron 45.0%
TCTGTACTTTACCCCGGTAA+TGG + chr2.3:66581249-66581268 None:intergenic 45.0%
TGAATCTCCTCCTCTTTGCA+TGG - chr2.3:66584252-66584271 MS.gene00961:intron 45.0%
TGCTACAACAGCATAGGAAC+TGG + chr2.3:66579948-66579967 None:intergenic 45.0%
TTATTCAGCACCCACTCAAG+CGG - chr2.3:66580541-66580560 MS.gene00961:intron 45.0%
TTCCAACGAATTTGGAGGCT+CGG + chr2.3:66580260-66580279 None:intergenic 45.0%
! CTTATGAGTTGGAGTTCTCC+TGG - chr2.3:66584600-66584619 MS.gene00961:intron 45.0%
! GACTTGGGAAGGTTTTTCAC+AGG - chr2.3:66581825-66581844 MS.gene00961:intron 45.0%
! GCTGAAACTTTTGTAGCAGC+TGG - chr2.3:66583415-66583434 MS.gene00961:intron 45.0%
! TATTTCAAGTGCCAAGCACC+AGG + chr2.3:66580158-66580177 None:intergenic 45.0%
! TGCTTGGCTGGAACTTTTGA+AGG - chr2.3:66582609-66582628 MS.gene00961:CDS 45.0%
! TTTGCCATTTAGTGCACTCC+TGG - chr2.3:66580137-66580156 MS.gene00961:intron 45.0%
!! CATGTTGGGAGCCATTTTGA+TGG - chr2.3:66583884-66583903 MS.gene00961:intron 45.0%
!! CGGAGTTGCCTTCTTTTTCA+AGG - chr2.3:66584065-66584084 MS.gene00961:intron 45.0%
!! CTTACACACTTGACTTGGGA+AGG - chr2.3:66581814-66581833 MS.gene00961:intron 45.0%
!! GCCATTTTGATGGACAAGTC+TGG - chr2.3:66583894-66583913 MS.gene00961:intron 45.0%
!! TGCTGGAAGTTTGGTGGTTT+TGG - chr2.3:66584533-66584552 MS.gene00961:intron 45.0%
!! TTTTTGGAGGCCCATACCTT+GGG + chr2.3:66579893-66579912 None:intergenic 45.0%
!!! TTTTTTGGAGGCCCATACCT+TGG + chr2.3:66579894-66579913 None:intergenic 45.0%
ACCAAAGCAAACAGCGGCAA+AGG + chr2.3:66580079-66580098 None:intergenic 50.0%
ACCTCAGACATCATCACCCA+AGG + chr2.3:66584397-66584416 None:intergenic 50.0%
AGCATCCGAGTCCAATCACA+TGG - chr2.3:66579690-66579709 MS.gene00961:intron 50.0%
AGGAACTGCTGGAAGTTTGG+TGG - chr2.3:66584527-66584546 MS.gene00961:intron 50.0%
AGTCTCCTAGATGGCTGGTA+AGG - chr2.3:66582679-66582698 MS.gene00961:intron 50.0%
CAGAGCGCACGTATTTGCTT+TGG + chr2.3:66583233-66583252 None:intergenic 50.0%
GGAACTGGTATGTTAGTGGG+GGG + chr2.3:66579933-66579952 None:intergenic 50.0%
GGGCTTTCTTCAGCAAAAGC+TGG - chr2.3:66583737-66583756 MS.gene00961:intron 50.0%
GTGACCATTGGTGCAATGCT+TGG - chr2.3:66581491-66581510 MS.gene00961:intron 50.0%
GTGCCAACATTAGCAGTTGC+AGG - chr2.3:66584200-66584219 MS.gene00961:intron 50.0%
TCCTAGATGGCTGGTAAGGA+AGG - chr2.3:66582683-66582702 MS.gene00961:intron 50.0%
TCCTTCCTTACCAGCCATCT+AGG + chr2.3:66582687-66582706 None:intergenic 50.0%
TCCTTTGCCGCTGTTTGCTT+TGG - chr2.3:66580075-66580094 MS.gene00961:intron 50.0%
TTTAGTGCACTCCTGGTGCT+TGG - chr2.3:66580144-66580163 MS.gene00961:intron 50.0%
! AGCACCAGGAGTGCACTAAA+TGG + chr2.3:66580144-66580163 None:intergenic 50.0%
! AGCTCCAAGCATTGCACCAA+TGG + chr2.3:66581498-66581517 None:intergenic 50.0%
! TCCTTGGGTGATGATGTCTG+AGG - chr2.3:66584393-66584412 MS.gene00961:intron 50.0%
! TGGGTTGGGATCAGTTCCTT+GGG - chr2.3:66584378-66584397 MS.gene00961:intron 50.0%
!! GTATGTTAGTGGGGGGTACT+AGG + chr2.3:66579926-66579945 None:intergenic 50.0%
!! TCGGTGCCGGAAGTAAAATG+AGG + chr2.3:66580241-66580260 None:intergenic 50.0%
!! TTGGGTTGGGATCAGTTCCT+TGG - chr2.3:66584377-66584396 MS.gene00961:intron 50.0%
!! TTTTGGAGGCCCATACCTTG+GGG + chr2.3:66579892-66579911 None:intergenic 50.0%
!!! GTTTGGTGGTTTTGGTAGCG+TGG - chr2.3:66584541-66584560 MS.gene00961:intron 50.0%
ACCAGCCATCTAGGAGACTC+AGG + chr2.3:66582678-66582697 None:intergenic 55.0%
AGACCTGATAGCCGCTTGAG+TGG + chr2.3:66580555-66580574 None:intergenic 55.0%
CAAATTCGTTGGAACGGCCC+TGG - chr2.3:66580266-66580285 MS.gene00961:intron 55.0%
CACCGAGCCTCCAAATTCGT+TGG - chr2.3:66580255-66580274 MS.gene00961:intron 55.0%
CAGGGCCGTTCCAACGAATT+TGG + chr2.3:66580268-66580287 None:intergenic 55.0%
GACCTGATAGCCGCTTGAGT+GGG + chr2.3:66580554-66580573 None:intergenic 55.0%
GGCCGTTCCAACGAATTTGG+AGG + chr2.3:66580265-66580284 None:intergenic 55.0%
TCCTGAGTCTCCTAGATGGC+TGG - chr2.3:66582674-66582693 MS.gene00961:intron 55.0%
!! TGGCGACAACTAGCTCTAGC+AGG - chr2.3:66582500-66582519 MS.gene00961:intron 55.0%
!!! GTGGTTTTGGTAGCGTGGCT+AGG - chr2.3:66584546-66584565 MS.gene00961:intron 55.0%
ACCAGGCCTCCCCAAGGTAT+GGG - chr2.3:66579880-66579899 MS.gene00961:intron 60.0%
CACCCACTCAAGCGGCTATC+AGG - chr2.3:66580549-66580568 MS.gene00961:intron 60.0%
GCAAGCAGCGCTATAGCACC+AGG - chr2.3:66579863-66579882 MS.gene00961:intron 60.0%
TATAGCACCAGGCCTCCCCA+AGG - chr2.3:66579874-66579893 MS.gene00961:intron 60.0%
TTTGCAATGGGCCGGACCCT+GGG - chr2.3:66579837-66579856 MS.gene00961:intron 60.0%
! TGGTAGCGTGGCTAGGAGCT+TGG - chr2.3:66584553-66584572 MS.gene00961:intron 60.0%
!! CGAATTTGGAGGCTCGGTGC+CGG + chr2.3:66580254-66580273 None:intergenic 60.0%
ATAGCGCTGCTTGCACCCCC+AGG + chr2.3:66579857-66579876 None:intergenic 65.0%
CACCAGGCCTCCCCAAGGTA+TGG - chr2.3:66579879-66579898 MS.gene00961:intron 65.0%
GTTTGCAATGGGCCGGACCC+TGG - chr2.3:66579836-66579855 MS.gene00961:intron 65.0%
TAGCGCTGCTTGCACCCCCA+GGG + chr2.3:66579856-66579875 None:intergenic 65.0%
TGGAGGCCCATACCTTGGGG+AGG + chr2.3:66579889-66579908 None:intergenic 65.0%
TTGCAATGGGCCGGACCCTG+GGG - chr2.3:66579838-66579857 MS.gene00961:intron 65.0%
CTGCTTGCACCCCCAGGGTC+CGG + chr2.3:66579851-66579870 None:intergenic 70.0%
GCCCATACCTTGGGGAGGCC+TGG + chr2.3:66579884-66579903 None:intergenic 70.0%
TGCAATGGGCCGGACCCTGG+GGG - chr2.3:66579839-66579858 MS.gene00961:intron 70.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 66579277 66584837 66579277 ID=MS.gene00961
chr2.3 mRNA 66579277 66584837 66579277 ID=MS.gene00961.t1;Parent=MS.gene00961
chr2.3 exon 66584640 66584837 66584640 ID=MS.gene00961.t1.exon1;Parent=MS.gene00961.t1
chr2.3 CDS 66584640 66584837 66584640 ID=cds.MS.gene00961.t1;Parent=MS.gene00961.t1
chr2.3 exon 66583516 66583578 66583516 ID=MS.gene00961.t1.exon2;Parent=MS.gene00961.t1
chr2.3 CDS 66583516 66583578 66583516 ID=cds.MS.gene00961.t1;Parent=MS.gene00961.t1
chr2.3 exon 66582555 66582644 66582555 ID=MS.gene00961.t1.exon3;Parent=MS.gene00961.t1
chr2.3 CDS 66582555 66582644 66582555 ID=cds.MS.gene00961.t1;Parent=MS.gene00961.t1
chr2.3 exon 66582404 66582463 66582404 ID=MS.gene00961.t1.exon4;Parent=MS.gene00961.t1
chr2.3 CDS 66582404 66582463 66582404 ID=cds.MS.gene00961.t1;Parent=MS.gene00961.t1
chr2.3 exon 66582239 66582304 66582239 ID=MS.gene00961.t1.exon5;Parent=MS.gene00961.t1
chr2.3 CDS 66582239 66582304 66582239 ID=cds.MS.gene00961.t1;Parent=MS.gene00961.t1
chr2.3 exon 66581752 66581817 66581752 ID=MS.gene00961.t1.exon6;Parent=MS.gene00961.t1
chr2.3 CDS 66581752 66581817 66581752 ID=cds.MS.gene00961.t1;Parent=MS.gene00961.t1
chr2.3 exon 66581593 66581668 66581593 ID=MS.gene00961.t1.exon7;Parent=MS.gene00961.t1
chr2.3 CDS 66581593 66581668 66581593 ID=cds.MS.gene00961.t1;Parent=MS.gene00961.t1
chr2.3 exon 66581419 66581483 66581419 ID=MS.gene00961.t1.exon8;Parent=MS.gene00961.t1
chr2.3 CDS 66581419 66581483 66581419 ID=cds.MS.gene00961.t1;Parent=MS.gene00961.t1
chr2.3 exon 66581037 66581129 66581037 ID=MS.gene00961.t1.exon9;Parent=MS.gene00961.t1
chr2.3 CDS 66581037 66581129 66581037 ID=cds.MS.gene00961.t1;Parent=MS.gene00961.t1
chr2.3 exon 66580857 66580937 66580857 ID=MS.gene00961.t1.exon10;Parent=MS.gene00961.t1
chr2.3 CDS 66580857 66580937 66580857 ID=cds.MS.gene00961.t1;Parent=MS.gene00961.t1
chr2.3 exon 66580678 66580762 66580678 ID=MS.gene00961.t1.exon11;Parent=MS.gene00961.t1
chr2.3 CDS 66580678 66580762 66580678 ID=cds.MS.gene00961.t1;Parent=MS.gene00961.t1
chr2.3 exon 66580330 66580376 66580330 ID=MS.gene00961.t1.exon12;Parent=MS.gene00961.t1
chr2.3 CDS 66580330 66580376 66580330 ID=cds.MS.gene00961.t1;Parent=MS.gene00961.t1
chr2.3 exon 66580179 66580241 66580179 ID=MS.gene00961.t1.exon13;Parent=MS.gene00961.t1
chr2.3 CDS 66580179 66580241 66580179 ID=cds.MS.gene00961.t1;Parent=MS.gene00961.t1
chr2.3 exon 66580028 66580087 66580028 ID=MS.gene00961.t1.exon14;Parent=MS.gene00961.t1
chr2.3 CDS 66580028 66580087 66580028 ID=cds.MS.gene00961.t1;Parent=MS.gene00961.t1
chr2.3 exon 66579885 66579938 66579885 ID=MS.gene00961.t1.exon15;Parent=MS.gene00961.t1
chr2.3 CDS 66579885 66579938 66579885 ID=cds.MS.gene00961.t1;Parent=MS.gene00961.t1
chr2.3 exon 66579700 66579759 66579700 ID=MS.gene00961.t1.exon16;Parent=MS.gene00961.t1
chr2.3 CDS 66579700 66579759 66579700 ID=cds.MS.gene00961.t1;Parent=MS.gene00961.t1
chr2.3 exon 66579493 66579607 66579493 ID=MS.gene00961.t1.exon17;Parent=MS.gene00961.t1
chr2.3 CDS 66579493 66579607 66579493 ID=cds.MS.gene00961.t1;Parent=MS.gene00961.t1
chr2.3 exon 66579277 66579392 66579277 ID=MS.gene00961.t1.exon18;Parent=MS.gene00961.t1
chr2.3 CDS 66579277 66579392 66579277 ID=cds.MS.gene00961.t1;Parent=MS.gene00961.t1
Gene Sequence

>MS.gene00961

ATGACAATTGAGCAGCATAAGGATATTGAGGATGGAGAAACTAATGGGTTTCAGTATTTGCAAGAACCTTTCATTCAACAAGGAAAGGATGCTTGTAAAGAAGTTGGATCAGATAAAAGTGTGGAAAATGGATCCATTGGAATGGTTCTGCTTAGCACATTTGTTGCTGTTTGTGGTTCTTTTTCATTTGGAACTTGTGTAAGTACTTAAGATTTTTGTAAATTATTATTGGCATGCTTGTCTTTTTTATATTTTTTTCTTAGATTTGTTTTTATATCCTTCGATTTTCACATAAAGGACTTTGATAACCTAGAGTTCGGTAAGATGATAAGTAAAGTATAGTCAATGATTGTTCTAATCATGATTTAAATTCAAGTTCACCAAAATGACTTGTTTTTAATCGTAGTTTATTAAGCATCCGAGTCCAATCACATGGTTGAAATGTTTGCGTTTGCGTGTGCATTAGATTAAACAACATGATTAAACTTAAATGGAATAAACGTTTACATCTATGAGCACGTTAGAGTAAGCAACTTAATTACATTTAAATTGGATAAGTGTTTGCAATGGGCCGGACCCTGGGGGTGCAAGCAGCGCTATAGCACCAGGCCTCCCCAAGGTATGGGCCTCCAAAAAATATTTACAGCCTAGTACCCCCCACTAACATACCAGTTCCTATGCTGTTGTAGCATGCTTTGCTGTTGCTGTTTCGGTATTTTGGGAGAGATTTTGTTTATTTTTCTTTTGGTGTATGGCTTTTTGGTTTCTTTCCTGTTGCTGGCCTTTTTTTCTGCTGTGTCCTTTGCCGCTGTTTGCTTTGGTATAGTAGGCTGGGCACCTTATTTTATCTGTTGTAACAGTTTGCCATTTAGTGCACTCCTGGTGCTTGGCACTTGAAATATATGCAGTTTCAAAAAAAAATTAGCGTTTTCCCCTTTCCAAAACACATTGTATGAATGAGCCTCATTTTACTTCCGGCACCGAGCCTCCAAATTCGTTGGAACGGCCCTGGTTTGCATGTGTTAGTTTATTAATCAACCAATTTAAATTCTTATTGATAAAGTGTTCGTAAGGTAAGTGCTTGTGAATAAGTTAAATTTTTATATGTTTTAAGTGTAAAACATATATAATCATATCATACATTCATACATATTCATCATATCATATCATATCTTTTTTTTTTTTTTTAAGAAATTATCATATCATATCTTATAAACACAAAGATTATTATGTTAAGCTAGTTTCTATTTTGTGATCAGGTGGGTTATTCAGCACCCACTCAAGCGGCTATCAGGTCTGATCTTAATCTATCTCTTGCTGAGGTAATTACTATTCTACTTTTTTCTCCTTATTGTCATTATTATATTATCATTCACTTCTATCACTTTTTATCTTTTTTTTCTATAAAATAAAATTACTCATCATATTTGTTGATAAGTGGGTTGATGTTCAAGCGTGACGAGTGCAATTGAGTATACATGAATGATGAGTGTATCAAGAAGAATAGGCTAGACAGACTCACATGGATCTATGACCTAACCTACATTACATGTTATTGAAAGAGTTTTCTAGACTTATGTCTAATTAAAAATATGTAAATATAATTATTATTTTTGTAATAAAATAAATATAATTATTATTATATTAAATTTTGCAATTTGTGTTAAATCATTAACATCTTATCTGATTTAATCATACTAACCTACATCTATTTTTGACATATTTAATCAACATTCTATTATAAAATAGAATTTTAATAAGATGTCATCTAAAAATAATAGTAAAGTAAGCATTTAAATAGGTTAAACTTTAAAATTGGCCTATGAATCTATGACACGTATTAGGTTATACTCAAATCAAATATTTCCCATGTAGCTAGACTTTTTTTTATTTATTTTTTGTCAAAGAAGATATTTCATTCATTCAAATAACTAAAAAAAACAAACATTACAAATGTGTATATCACTATCCATTACCGGGGTAAAGTACAGAATTTGTAAATTGGACCATAAATTTTGTACTCTCTAACCTTAAATTATTGCATAAAAAAAACTATAACAGTCAGTCTGTTGTTAGAATAATGAGTCAATGACACAATTAACATAATATTGCACAATTAAAACTCTAACATGATCAATCATTGTGTTCTTTTTTTGTTGCTATTTCTACATAATATGTTTTGGGGATTGGCAGTTTTCAATGTTTGGTTCTTTGGTGACCATTGGTGCAATGCTTGGAGCTATAACAAGTGGTCGAGTTACTGATATCATTGGCAGGAAAGGGGTATGCATGTGTAACTTAAATGCCTTAATATTCTTTCCATTTAAAATTTTATTCTTAGAAGTAACATTTTGGATAATTATATGAGAAACAGGCTATGAGAATTTCCACAGGATTTTGTATCATAGGATGGCTAGCTGTCTTCTTCTCTAAGGTATGTATCTTTTGAAATTTTAACAATGTGTTCATCTTATAAAATGTTGTTACAAAATAAAAATTCATTAAGTTATCTCATGATTCTCATGTAATGCAGAGTTCTTACACACTTGACTTGGGAAGGTTTTTCACAGGATATGGAATTGGAGTTATCTCATATGTGGTAATTAATTGATAAACAAAGAAATTAACTTCAACTTATTTTTATTCAATCATGTTTGGAGGAATTAAAATTGATTTAAAATGTATAAAATTAATTTTAACATGTATGGATATTGTCAAGTATAATTGATTCTTACTTGAAGTTAGAATTTGAAATTTTTAGTTCTAGGATTGATTTTTAACCTTGAATTTACCTTTCAAATCACTTGATGAATGTATTAAAACATAAACCATCTTACATTCAATACACTTACAGCCATAATCATTTTCAGAGAACCAATTCATTCAAAATCAATTTTTGTCACTATAGAACCAAACTAAACACATACTGATTGCATGCAGTGTTACTTAATTGGTTATATTTATATATATGTTGCCTCTTTATTATAATATTTCTAACAAAAATCAGCATAACGGATCAGGTTCCAGTATATATAGCAGAAATAGCACCAAAAAATCTTAGAGGAGGACTTGCAACAACAAATCAGGTGAGGAAATAATAACAACTTTTGTTTTTACTTCTTAAGTATCATTGAATTGGAATTTAGCATTGATTATGATTATTTTGCAGCTTATGATTGTTATTGGATCATCAATGTCATTTTTAATAGGAAGTCTCATAAATTGGCGACAACTAGCTCTAGCAGGTATCTCCATAATAACATTAGTTTTAAATTTTTGCTCGAAGGATATAACAAATTAAGAAGGTAAATATCTAACTCTTGATTTGATTTTGCTTGGCTGGAACTTTTGAAGGCCTAGTTCCTTGCATTTGCTTGCTTGTTGGTCTGTGCTTCATTCCTGAGTCTCCTAGATGGCTGGTAAGGAAGGACTACGTCTGCTTTAATCAAGTTATTTGAGAGCTTATAAAAACAGCTTATGATATGTCGACAAACTCTTTTGAACTTATAGTTTATATGCGAAAAGTTTGGCTTATTTTATCTCTTGTTGTAGAAATGACTTACACATAAACATTAGTATGATAAGCGTATACTATAAGTGCGTGATTAAGTTGTTTATATCAATGTGCTTCTATGTTTTCTTCTCCTATAAAAGAATAAGAATAATGTGTCGGTGCATAAACTAATAAATTATGCACAATTTTTTCAGGCAAAGGTTGGTCGTGAAAAAGAATTTCAACTAGCATTAAGGAAACTACGGGGTAAAGACGTTGATATTTCTGATGAAGCTAATGAAATTCTGGTACATTCCAAACTTTCTTAACTGATCAAGAACCATAGTATTTTTTTTAATTGATTTCACATGTTTGATGACCCTATCTGAACTCAATTTTGCTTATAGGATAATATTGAAACTCTTCAAAGCCTTCCTAAGACTAAGTTTTTGGATTTGTTCCAAAGCAAATACGTGCGCTCTGTAATTGTGAGTAACAACATATTTTACTTGTAGAAATTAAACTCATTCATAATCTGTTTGATTACTCTAAAGGGTCCTAAACTATATAGAACAATTTCAGATTGGAGTTGGATTAATGGCATTTCAACAATCTGTTGGAATTAACGGCATAGGATTCTATACAGCTGAAACTTTTGTAGCAGCTGGTAAGTAAAATGAAATACATGCTGATTGTGGAAAATCAAAAGAAATATGTTTATTCTGTCATATACTACATCCGTCCCTAAATATAGTACTCTGTTGACGGAATTACTTGGAATTAATCAATGAAGAAATTTGGTGGTAGTATTAAATTTGTGAACAATTGGTATTGTTTTACAAGTTTACCATTTAAGAAAGAGAAATTTGCCATTATAGTACTTAATACATTTTGTTGAAAAAGTTGTTACATAATAAAGGGTATGCTGGTAAATTAATATGTAATACAATTGAAATTTTGATTTGCAGGGCTTTCTTCAGCAAAAGCTGGTACCATAGCTTATGCATGTATACAGGTACTTGATCCCTTTAATCATTTCTCAGGAAACTAACCATATAACTAAATTTTTTTGTCTAAACTTTATTTGTTACATTGAATAATAGGTTCCATTTACCATGTTGGGAGCCATTTTGATGGACAAGTCTGGAAGAAAACCTCTTATAACAGTAATACTTACAAATACATATATCAACTACATCTGCATGCAAAGGGAATGAGAAATTTAGGTTCAACCAAATAATTGTTGTATAATTTCAGGTCTCTGCAAGTGGAACATTCTTAGGCTGCTTTATAACCGGAGTTGCCTTCTTTTTCAAGGCAAGTCTATAGTGTAAATTTTCATTCTAAGCTTTGATTCAAGTCTATAGCACTTTCTAAACTCATCTTTATGATTTCAAATGGATCAGAATCAAAGCTTATGGCTTGAGTGGGTGCCAACATTAGCAGTTGCAGGTGTATTGGTGAGTTTTCTTCCTCAATTCTTGAATCTCCTCCTCTTTGCATGGTTGATACAGTAACTATACATTACTTATACTCAAAATAATGTTTAACCTGAAAATATCTCATATTTTCTTCTTGTAATCAGATCTACATAGCAGCATTTTCAATTGGGTTGGGATCAGTTCCTTGGGTGATGATGTCTGAGGTATGTTATCATTTGACACAACACCAAAAATTGTAATGGTTTAGCTAGACTCTTAGCATGTCATTAAAGAAAAAGTACTTTTCTTATTGCAGGTGTTTCCGATAAATGTGAAAGGAACTGCTGGAAGTTTGGTGGTTTTGGTAGCGTGGCTAGGAGCTTGGATAGTTTCATATACTTTCAATTTTCTTATGAGTTGGAGTTCTCCTGGTAATTAAGCACATAATCAATATTAATTACTTAGATTCATTATTATCTGATTCTGATTATAATGAGTAACATGTACTAATTGTATTGTTTTTGTGGACAGGTACTATGTTTTTGTATGCTGGATGTTCCCTCTTAACCATTCTATTTGTAGCAAAAGTAGTCCCAGAAACCAAAGGCAAAACATTGGAAGAAATTCAGGCTTCCATCAGTTCTTAG

Protein sequence

>MS.gene00961.t1

MTIEQHKDIEDGETNGFQYLQEPFIQQGKDACKEVGSDKSVENGSIGMVLLSTFVAVCGSFSFGTCVGYSAPTQAAIRSDLNLSLAEFSMFGSLVTIGAMLGAITSGRVTDIIGRKGAMRISTGFCIIGWLAVFFSKSSYTLDLGRFFTGYGIGVISYVVPVYIAEIAPKNLRGGLATTNQLMIVIGSSMSFLIGSLINWRQLALAGLVPCICLLVGLCFIPESPRWLAKVGREKEFQLALRKLRGKDVDISDEANEILDNIETLQSLPKTKFLDLFQSKYVRSVIIGVGLMAFQQSVGINGIGFYTAETFVAAGLSSAKAGTIAYACIQVPFTMLGAILMDKSGRKPLITVSASGTFLGCFITGVAFFFKNQSLWLEWVPTLAVAGVLIYIAAFSIGLGSVPWVMMSEVFPINVKGTAGSLVVLVAWLGAWIVSYTFNFLMSWSSPGTMFLYAGCSLLTILFVAKVVPETKGKTLEEIQASISS