AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene039339

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene039339.t1 MTR_2g073500 95.429 350 14 2 1 350 1 348 0.0 692
MS.gene039339.t1 MTR_1g111010 62.784 352 117 5 1 348 1 342 1.14e-161 456
MS.gene039339.t1 MTR_2g073510 52.134 328 138 5 28 344 31 350 9.00e-123 357
MS.gene039339.t1 MTR_3g049330 51.515 330 140 6 30 348 31 351 1.46e-121 354
MS.gene039339.t1 MTR_2g015720 46.070 369 164 8 3 347 1 358 2.67e-112 331
MS.gene039339.t1 MTR_3g035830 47.788 339 151 8 22 347 23 348 3.27e-111 328
MS.gene039339.t1 MTR_4g088030 45.706 361 173 7 1 348 1 351 2.47e-110 326
MS.gene039339.t1 MTR_5g034810 47.289 332 153 7 30 350 35 355 4.36e-110 325
MS.gene039339.t1 MTR_3g021060 46.334 341 157 8 22 349 38 365 8.32e-109 322
MS.gene039339.t1 MTR_4g079700 48.780 328 147 6 30 347 47 363 1.30e-107 319
MS.gene039339.t1 MTR_4g087730 48.024 329 151 6 30 348 45 363 2.45e-107 318
MS.gene039339.t1 MTR_3g021090 47.321 336 149 9 22 343 23 344 5.68e-106 317
MS.gene039339.t1 MTR_2g091175 46.084 332 152 9 30 348 50 367 1.76e-103 309
MS.gene039339.t1 MTR_5g071350 42.740 365 160 10 23 348 46 400 2.21e-94 287
MS.gene039339.t1 MTR_3g464570 41.210 347 170 8 27 348 40 377 6.83e-92 280
MS.gene039339.t1 MTR_1g050448 42.943 333 165 8 30 347 53 375 3.02e-89 273
MS.gene039339.t1 MTR_1g112210 42.857 336 166 9 28 347 57 382 2.80e-88 270
MS.gene039339.t1 MTR_1g112210 42.857 336 153 10 28 347 57 369 1.51e-86 266
MS.gene039339.t1 MTR_7g093450 40.230 348 172 10 30 348 248 588 4.36e-83 264
MS.gene039339.t1 MTR_0136s0010 40.230 348 172 9 30 348 170 510 1.55e-82 260
MS.gene039339.t1 MTR_4g121560 39.655 348 174 12 30 348 114 454 1.21e-80 253
MS.gene039339.t1 MTR_5g059400 38.592 355 177 10 26 348 171 516 2.77e-78 249
MS.gene039339.t1 MTR_1g116130 38.592 355 177 10 26 348 171 516 2.77e-78 249
MS.gene039339.t1 MTR_7g109550 38.012 342 177 10 30 347 137 467 1.50e-76 243
MS.gene039339.t1 MTR_4g126950 36.963 349 184 12 28 348 107 447 3.76e-75 239
MS.gene039339.t1 MTR_5g033800 35.795 352 191 10 26 349 141 485 5.00e-75 240
MS.gene039339.t1 MTR_3g090120 37.709 358 200 9 10 349 109 461 1.12e-74 238
MS.gene039339.t1 MTR_4g016940 35.897 351 187 9 28 347 84 427 1.20e-72 232
MS.gene039339.t1 MTR_8g069790 35.127 353 194 9 25 349 173 518 1.48e-71 232
MS.gene039339.t1 MTR_1g058380 36.390 349 188 10 28 348 53 395 2.96e-70 225
MS.gene039339.t1 MTR_3g464570 40.809 272 134 6 102 348 4 273 3.72e-69 218
MS.gene039339.t1 MTR_7g094750 36.592 358 175 12 30 349 91 434 1.26e-68 222
MS.gene039339.t1 MTR_3g070900 34.930 355 191 10 27 348 103 450 3.69e-68 221
MS.gene039339.t1 MTR_3g071650 36.080 352 183 10 30 348 89 431 1.76e-66 216
MS.gene039339.t1 MTR_8g093530 35.613 351 185 10 25 350 85 419 5.89e-66 214
MS.gene039339.t1 MTR_8g463790 32.418 364 201 10 20 350 61 412 7.58e-66 214
MS.gene039339.t1 MTR_2g022560 37.607 351 180 10 30 349 97 439 1.10e-64 212
MS.gene039339.t1 MTR_4g014430 34.571 350 190 10 28 347 106 446 3.31e-64 210
MS.gene039339.t1 MTR_4g014440 32.071 396 215 13 1 348 19 408 1.06e-63 208
MS.gene039339.t1 MTR_7g068920 33.994 353 191 10 28 347 78 421 4.70e-62 204
MS.gene039339.t1 MTR_5g083260 35.574 357 184 13 27 348 80 425 2.11e-61 202
MS.gene039339.t1 MTR_7g070060 31.831 355 198 9 30 348 64 410 4.71e-59 196
MS.gene039339.t1 MTR_5g082880 33.239 355 194 11 30 348 165 512 4.82e-59 199
MS.gene039339.t1 MTR_5g033800 34.263 251 148 6 20 260 135 378 6.78e-50 171
MS.gene039339.t1 MTR_7g094750 35.200 250 129 7 30 260 91 326 5.46e-45 157
MS.gene039339.t1 MTR_7g070060 30.743 296 167 7 89 348 15 308 4.95e-43 151
MS.gene039339.t1 MTR_5g069320 35.055 271 132 10 83 340 147 386 5.97e-40 145
MS.gene039339.t1 MTR_7g070060 31.092 238 151 5 30 260 64 295 1.13e-38 140
MS.gene039339.t1 MTR_5g035150 29.805 359 205 14 27 347 82 431 5.39e-34 130
MS.gene039339.t1 MTR_8g093870 28.367 349 216 10 27 347 130 472 1.19e-33 130
MS.gene039339.t1 MTR_6g061710 28.418 373 197 14 25 347 162 514 2.22e-32 127
MS.gene039339.t1 MTR_4g092830 25.140 358 219 14 30 349 48 394 8.07e-32 124
MS.gene039339.t1 MTR_5g035090 27.119 354 211 12 27 343 80 423 1.86e-30 120
MS.gene039339.t1 MTR_1g076690 28.177 362 204 14 25 343 218 566 3.94e-30 121
MS.gene039339.t1 MTR_4g125060 28.571 350 212 12 28 347 130 471 2.92e-29 117
MS.gene039339.t1 MTR_4g125060 28.571 350 212 12 28 347 169 510 3.71e-29 117
MS.gene039339.t1 MTR_4g125060 28.571 350 212 12 28 347 198 539 4.27e-29 117
MS.gene039339.t1 MTR_2g016060 27.177 379 218 16 14 349 39 402 1.25e-28 115
MS.gene039339.t1 MTR_5g035080 26.975 367 204 15 27 347 72 420 3.11e-28 114
MS.gene039339.t1 MTR_6g016880 27.731 357 204 11 30 347 78 419 1.07e-27 112
MS.gene039339.t1 MTR_6g016240 26.331 357 213 14 30 347 71 416 1.41e-27 112
MS.gene039339.t1 MTR_8g104970 27.348 362 201 14 27 343 117 461 2.82e-27 112
MS.gene039339.t1 MTR_6g007777 25.634 355 220 12 27 347 113 457 3.04e-27 112
MS.gene039339.t1 MTR_7g033230 27.198 364 209 11 26 347 260 609 1.15e-26 111
MS.gene039339.t1 MTR_3g109840 27.855 359 194 16 30 343 73 411 2.30e-26 108
MS.gene039339.t1 MTR_5g035070 28.693 352 204 14 30 343 87 429 3.54e-26 108
MS.gene039339.t1 MTR_7g033230 27.198 364 209 11 26 347 330 679 3.89e-26 109
MS.gene039339.t1 MTR_8g027900 26.184 359 216 12 28 348 209 556 8.95e-26 108
MS.gene039339.t1 MTR_7g019120 26.891 357 207 11 30 347 79 420 5.99e-25 105
MS.gene039339.t1 MTR_6g016875 26.554 354 215 14 30 347 64 408 8.02e-25 104
MS.gene039339.t1 MTR_3g021150 44.444 108 45 3 223 317 1 106 4.07e-24 95.9
MS.gene039339.t1 MTR_8g099300 24.933 373 212 11 24 348 68 420 5.12e-23 99.4
MS.gene039339.t1 MTR_5g035120 41.414 99 51 2 27 125 72 163 2.33e-19 84.7
MS.gene039339.t1 MTR_7g019140 39.583 96 51 1 30 125 79 167 5.47e-17 78.2
MS.gene039339.t1 MTR_2g022580 31.667 120 68 3 97 203 2 120 5.74e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene039339.t1 AT1G78710 56.325 332 122 7 30 349 38 358 3.61e-136 392
MS.gene039339.t1 AT2G30900 51.652 333 140 7 30 349 43 367 4.39e-119 348
MS.gene039339.t1 AT1G29050 49.849 331 140 9 30 347 61 378 1.32e-113 335
MS.gene039339.t1 AT2G42570 49.096 332 145 8 30 349 47 366 1.68e-109 324
MS.gene039339.t1 AT3G14850 49.107 336 146 8 28 349 32 356 4.76e-108 320
MS.gene039339.t1 AT2G34070 47.879 330 149 9 30 347 65 383 2.23e-106 317
MS.gene039339.t1 AT2G31110 47.273 330 150 8 30 347 45 362 5.33e-106 315
MS.gene039339.t1 AT1G78710 49.231 325 103 9 30 349 31 298 2.95e-101 301
MS.gene039339.t1 AT2G30900 55.947 227 91 4 30 255 43 261 6.83e-87 263
MS.gene039339.t1 AT5G58600 41.908 346 164 11 30 348 66 401 1.89e-86 266
MS.gene039339.t1 AT3G54260 40.059 337 176 8 30 350 51 377 3.57e-85 263
MS.gene039339.t1 AT2G30010 40.223 358 171 10 24 348 50 397 2.30e-82 256
MS.gene039339.t1 AT2G30010 40.223 358 171 10 24 348 93 440 4.35e-82 256
MS.gene039339.t1 AT5G06700 39.080 348 176 10 30 348 255 595 5.47e-82 261
MS.gene039339.t1 AT3G12060 38.286 350 180 9 28 348 194 536 1.74e-80 256
MS.gene039339.t1 AT3G14850 48.638 257 114 6 107 349 1 253 7.93e-80 244
MS.gene039339.t1 AT3G62390 38.081 344 183 9 28 348 136 472 1.03e-79 251
MS.gene039339.t1 AT5G49340 40.625 352 167 12 30 348 100 442 5.91e-78 246
MS.gene039339.t1 AT2G34070 47.431 253 117 7 107 347 1 249 1.52e-76 236
MS.gene039339.t1 AT2G31110 48.673 226 107 4 30 255 45 261 2.39e-75 233
MS.gene039339.t1 AT5G20590 37.283 346 184 12 30 348 141 480 8.20e-74 236
MS.gene039339.t1 AT1G60790 36.648 352 188 10 28 349 188 534 1.61e-73 237
MS.gene039339.t1 AT1G48880 38.095 336 183 9 30 349 115 441 6.49e-73 233
MS.gene039339.t1 AT3G06080 36.648 352 184 11 30 349 103 447 1.19e-66 218
MS.gene039339.t1 AT3G11030 36.752 351 183 10 30 348 106 449 5.24e-66 215
MS.gene039339.t1 AT5G19160 36.338 355 184 11 30 349 99 446 1.22e-65 214
MS.gene039339.t1 AT5G01360 32.011 353 199 10 28 347 34 378 3.52e-65 211
MS.gene039339.t1 AT5G06230 35.328 351 199 8 25 348 16 365 4.90e-65 210
MS.gene039339.t1 AT2G40160 34.831 356 187 11 30 348 77 424 6.47e-65 212
MS.gene039339.t1 AT5G01620 32.479 351 199 9 27 347 107 449 6.57e-65 212
MS.gene039339.t1 AT5G01620 32.479 351 199 9 27 347 107 449 6.57e-65 212
MS.gene039339.t1 AT5G01620 32.479 351 199 9 27 347 115 457 8.50e-65 212
MS.gene039339.t1 AT5G06230 35.328 351 199 8 25 348 57 406 1.15e-64 211
MS.gene039339.t1 AT5G01360 32.011 353 199 10 28 347 90 434 1.19e-64 211
MS.gene039339.t1 AT3G55990 33.616 354 195 10 28 348 138 484 1.24e-64 213
MS.gene039339.t1 AT2G40160 34.758 351 184 11 30 343 77 419 1.89e-64 211
MS.gene039339.t1 AT3G11570 36.705 346 188 9 30 348 79 420 1.51e-63 208
MS.gene039339.t1 AT2G40320 34.648 355 190 10 27 348 78 423 4.26e-63 207
MS.gene039339.t1 AT1G73140 33.520 358 191 11 26 349 63 407 1.67e-62 205
MS.gene039339.t1 AT2G31110 47.596 208 97 5 150 347 9 214 1.86e-62 199
MS.gene039339.t1 AT5G58600 43.590 234 119 7 30 260 66 289 6.52e-60 194
MS.gene039339.t1 AT2G40150 32.402 358 196 10 30 348 71 421 2.07e-59 197
MS.gene039339.t1 AT3G62390 37.200 250 140 5 28 267 136 378 2.95e-57 191
MS.gene039339.t1 AT2G38320 29.775 356 210 8 28 349 57 406 6.29e-56 188
MS.gene039339.t1 AT5G20590 35.124 242 140 6 30 260 141 376 1.66e-50 173
MS.gene039339.t1 AT2G38320 29.653 317 189 6 67 349 7 323 6.04e-49 167
MS.gene039339.t1 AT2G40160 36.777 242 136 5 30 261 77 311 1.56e-48 166
MS.gene039339.t1 AT3G06080 37.860 243 132 6 30 260 103 338 1.09e-47 164
MS.gene039339.t1 AT5G19160 35.802 243 137 5 30 260 99 334 2.99e-46 161
MS.gene039339.t1 AT5G06230 33.871 248 151 4 25 260 57 303 3.37e-43 152
MS.gene039339.t1 AT5G64470 28.531 354 211 12 29 350 54 397 6.89e-39 142
MS.gene039339.t1 AT5G64470 28.056 360 211 13 29 350 54 403 1.93e-38 142
MS.gene039339.t1 AT1G70230 29.545 352 195 12 30 347 79 411 1.53e-37 139
MS.gene039339.t1 AT5G51640 28.763 372 210 12 23 350 131 491 4.29e-33 129
MS.gene039339.t1 AT3G28150 27.978 361 217 13 22 349 62 412 1.46e-32 126
MS.gene039339.t1 AT4G25360 28.065 367 214 10 25 350 170 527 2.50e-31 124
MS.gene039339.t1 AT4G25360 28.065 367 214 10 25 350 170 527 2.50e-31 124
MS.gene039339.t1 AT5G64020 28.056 360 209 13 30 347 57 408 7.49e-30 118
MS.gene039339.t1 AT1G01430 27.013 385 226 12 7 348 76 448 8.49e-30 119
MS.gene039339.t1 AT2G14530 26.503 366 208 13 26 347 58 406 1.33e-29 117
MS.gene039339.t1 AT5G20680 26.891 357 209 14 28 347 116 457 3.47e-29 117
MS.gene039339.t1 AT5G20680 27.324 355 210 12 28 347 192 533 4.61e-29 117
MS.gene039339.t1 AT5G20680 27.324 355 210 12 28 347 210 551 6.68e-29 117
MS.gene039339.t1 AT5G20680 27.324 355 210 12 28 347 210 551 6.68e-29 117
MS.gene039339.t1 AT5G20680 27.324 355 210 12 28 347 210 551 6.68e-29 117
MS.gene039339.t1 AT5G20680 27.324 355 210 12 28 347 210 551 6.68e-29 117
MS.gene039339.t1 AT2G37720 26.705 352 212 13 30 347 143 482 3.07e-27 112
MS.gene039339.t1 AT4G01080 27.792 385 230 14 1 348 58 431 7.15e-26 107
MS.gene039339.t1 AT5G15900 28.610 367 189 13 30 347 67 409 3.04e-25 105
MS.gene039339.t1 AT5G15900 28.610 367 189 13 30 347 86 428 3.27e-25 105
MS.gene039339.t1 AT3G02440 28.451 355 204 15 30 347 127 468 1.16e-24 104
MS.gene039339.t1 AT5G15890 26.575 365 204 11 27 350 184 525 1.43e-24 104
MS.gene039339.t1 AT3G02440 28.451 355 204 15 30 347 135 476 1.55e-24 104
MS.gene039339.t1 AT5G64470 27.381 252 156 9 29 263 54 295 7.13e-23 97.8
MS.gene039339.t1 AT5G64470 27.381 252 156 9 29 263 54 295 8.72e-23 97.4
MS.gene039339.t1 AT4G23790 25.895 363 216 14 28 348 77 428 8.57e-20 90.5
MS.gene039339.t1 AT4G11090 24.167 360 224 14 28 348 77 426 3.35e-17 82.8

Find 76 sgRNAs with CRISPR-Local

Find 174 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTAAGGTATAATTTGAATT+TGG 0.111523 2.2:-19044992 None:intergenic
TTGCCACATGTTGTTGCTTA+TGG 0.237223 2.2:-19044939 None:intergenic
AGTTGGGAATGAATTAATTA+AGG 0.268562 2.2:+19045441 MS.gene039339:CDS
TGCAGTCACTGGTGTCTTGC+TGG 0.271375 2.2:+19046272 MS.gene039339:CDS
AAATGGGTTCTTAGTGGATT+TGG 0.271793 2.2:+19045186 MS.gene039339:CDS
AAAGACCATTATAAGTAAAA+TGG 0.288544 2.2:+19046151 MS.gene039339:CDS
TTAAGGTATAATTTGAATTT+GGG 0.291025 2.2:-19044991 None:intergenic
AAAGACTAGAGTCTTGTTTC+AGG 0.293533 2.2:+19045540 MS.gene039339:CDS
AACATTTCATTCCAAGTATC+AGG 0.294167 2.2:-19046299 None:intergenic
TTGGTTCATGATAAAGAAAA+AGG 0.329997 2.2:+19045205 MS.gene039339:CDS
TTGCTGGTGTTCCTGATACT+TGG 0.354133 2.2:+19046288 MS.gene039339:CDS
TACTAGCTTCAGCATTTCTA+TGG 0.355586 2.2:+19043703 MS.gene039339:CDS
CATGAAAATTCTAGTGGAAA+AGG 0.364151 2.2:+19046065 MS.gene039339:intron
AATTAAGGAGATGGATCATT+TGG 0.368405 2.2:+19045456 MS.gene039339:CDS
TCAAAGGACTGTCCTTTCAT+TGG 0.370728 2.2:+19043831 MS.gene039339:CDS
TATCATTGGTGGACTCATAC+TGG 0.389613 2.2:+19045301 MS.gene039339:CDS
AAGATTATATCAAGTATAGA+TGG 0.396541 2.2:+19043892 MS.gene039339:CDS
AATGTTGGAATCAACCCATT+TGG 0.413535 2.2:-19045509 None:intergenic
GATTAAGCACTTGGGCCAAA+TGG 0.421751 2.2:+19045494 MS.gene039339:CDS
GGTGGCATTGATCCTTGATC+TGG 0.428413 2.2:-19046107 None:intergenic
AAACAAGACTCTAGTCTTTG+AGG 0.440333 2.2:-19045536 None:intergenic
ACTCACTGTGTTCTCAATTC+CGG 0.446901 2.2:+19045030 MS.gene039339:CDS
TCACTTTGCTAACACAGTTA+AGG 0.449047 2.2:+19046198 MS.gene039339:CDS
AGGAAAGAAGATAATGTTTG+TGG 0.452207 2.2:+19044910 MS.gene039339:CDS
AACAAGACTCTAGTCTTTGA+GGG 0.459535 2.2:-19045535 None:intergenic
CAATTAGCTCAGGGAATCAA+TGG 0.459718 2.2:+19045248 MS.gene039339:CDS
GTGATTATTCTCAAGGCAAC+TGG 0.460555 2.2:+19043757 MS.gene039339:CDS
AGGTTGGACACAATTAGCTC+AGG 0.471021 2.2:+19045238 MS.gene039339:CDS
ATTAAGCACTTGGGCCAAAT+GGG 0.476158 2.2:+19045495 MS.gene039339:CDS
ATGAAAATTCTAGTGGAAAA+GGG 0.480566 2.2:+19046066 MS.gene039339:intron
GACTGTCCTTTCATTGGTCA+AGG 0.484445 2.2:+19043837 MS.gene039339:CDS
AAGACTAGAGTCTTGTTTCA+GGG 0.485326 2.2:+19045541 MS.gene039339:CDS
GAGAGGGTAGGAGAAGGTAG+TGG 0.492336 2.2:-19043799 None:intergenic
CTAGTAGCAGAGAACATAGT+TGG 0.496126 2.2:-19043686 None:intergenic
TTAAGATTGGATTAAGCACT+TGG 0.499090 2.2:+19045485 MS.gene039339:CDS
TTGTTAACAGGTTTGATGGT+GGG 0.501332 2.2:+19044867 MS.gene039339:intron
CACATAACTTTCACCGCGGC+CGG 0.509632 2.2:-19046246 None:intergenic
AGTCTTTGAGGGTTCAATGT+TGG 0.510727 2.2:-19045524 None:intergenic
GAATGAATTAATTAAGGAGA+TGG 0.511939 2.2:+19045447 MS.gene039339:CDS
CCGCGGCCGGTGTAGATAGA+CGG 0.514592 2.2:-19046233 None:intergenic
GGATCAATGCCACCTTATCC+TGG 0.514871 2.2:+19046116 MS.gene039339:CDS
GGAAAGAAGATAATGTTTGT+GGG 0.515523 2.2:+19044911 MS.gene039339:CDS
CCCTCTCTATGATGCTTCAA+AGG 0.517294 2.2:+19043815 MS.gene039339:CDS
CCGTCTATCTACACCGGCCG+CGG 0.520219 2.2:+19046233 MS.gene039339:CDS
CGCGGCCGGTGTAGATAGAC+GGG 0.522573 2.2:-19046232 None:intergenic
TCACATGGTTGTTGTAGAGA+AGG 0.535627 2.2:-19043738 None:intergenic
ACAGTGTCTACACCAGGATA+AGG 0.548405 2.2:-19046128 None:intergenic
CAACCATGTGATTATTCTCA+AGG 0.548739 2.2:+19043750 MS.gene039339:CDS
AGACAAACTAAACCAGATCA+AGG 0.552461 2.2:+19046095 MS.gene039339:CDS
CCTCTAGTTGTAATCTTCCA+AGG 0.555041 2.2:+19043919 MS.gene039339:CDS
TTTGTTAACAGGTTTGATGG+TGG 0.560255 2.2:+19044866 MS.gene039339:intron
CTTTGCTAACACAGTTAAGG+AGG 0.560315 2.2:+19046201 MS.gene039339:CDS
GTGATGTCAAGCAATTGTAC+TGG 0.560712 2.2:-19046179 None:intergenic
ATCATAGAGAGGGTAGGAGA+AGG 0.576762 2.2:-19043805 None:intergenic
CTTGGAAGATTACAACTAGA+GGG 0.584327 2.2:-19043918 None:intergenic
AGCTCAGGGAATCAATGGAA+AGG 0.586442 2.2:+19045253 MS.gene039339:CDS
CCTTGGAAGATTACAACTAG+AGG 0.593707 2.2:-19043919 None:intergenic
CGGCCGCGGTGAAAGTTATG+TGG 0.597021 2.2:+19046247 MS.gene039339:CDS
GGTTGGACACAATTAGCTCA+GGG 0.597836 2.2:+19045239 MS.gene039339:CDS
GTAGCAGAGAACATAGTTGG+TGG 0.598237 2.2:-19043683 None:intergenic
CTAACACAGTTAAGGAGGGA+TGG 0.604483 2.2:+19046206 MS.gene039339:CDS
TCAAAACCTTGACCAATGAA+AGG 0.604578 2.2:-19043843 None:intergenic
TCCTTTGAAGCATCATAGAG+AGG 0.605006 2.2:-19043816 None:intergenic
TAAGATTGGATTAAGCACTT+GGG 0.608859 2.2:+19045486 MS.gene039339:CDS
GTTATGTGGACTGCAGTCAC+TGG 0.608943 2.2:+19046261 MS.gene039339:CDS
CCTTTGAAGCATCATAGAGA+GGG 0.612469 2.2:-19043815 None:intergenic
TGAAGCATCATAGAGAGGGT+AGG 0.612829 2.2:-19043811 None:intergenic
GTCTTTACAGTGTCTACACC+AGG 0.622735 2.2:-19046134 None:intergenic
AATATGAAGCTTCAATCATG+TGG 0.641893 2.2:+19045158 MS.gene039339:CDS
ACTCCATAAGCAACAACATG+TGG 0.644857 2.2:+19044936 MS.gene039339:CDS
TTTGCTAACACAGTTAAGGA+GGG 0.649121 2.2:+19046202 MS.gene039339:CDS
GTGTCTACACCAGGATAAGG+TGG 0.672854 2.2:-19046125 None:intergenic
TTGCCTTGAGAATAATCACA+TGG 0.684283 2.2:-19043753 None:intergenic
GGTCACCCGTCTATCTACAC+CGG 0.714846 2.2:+19046227 MS.gene039339:CDS
TTGGAATGAAATGTTGTATG+CGG 0.720934 2.2:+19046307 MS.gene039339:CDS
AGTCCACATAACTTTCACCG+CGG 0.826136 2.2:-19046250 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAATAAAAAAATTCCTTT+TGG - chr2.2:19044672-19044691 None:intergenic 10.0%
!!! AAATTTTTTAACTCAAATTT+TGG + chr2.2:19045342-19045361 MS.gene039339:intron 10.0%
!! AAAATAAAAATTGAATGAGT+TGG + chr2.2:19044109-19044128 MS.gene039339:intron 15.0%
!! TTAAGGTATAATTTGAATTT+GGG - chr2.2:19044994-19045013 None:intergenic 15.0%
!!! ATAATCAAGATTTTAACAAA+AGG - chr2.2:19045910-19045929 None:intergenic 15.0%
!!! TGAATTTTATTATGATGAAA+TGG + chr2.2:19045973-19045992 MS.gene039339:intron 15.0%
!! AAAGACCATTATAAGTAAAA+TGG + chr2.2:19046151-19046170 MS.gene039339:CDS 20.0%
!! AAGATTATATCAAGTATAGA+TGG + chr2.2:19043892-19043911 MS.gene039339:CDS 20.0%
!! GAAAATAAAAACAAGAACTT+TGG - chr2.2:19044002-19044021 None:intergenic 20.0%
!! GTTAAGGTATAATTTGAATT+TGG - chr2.2:19044995-19045014 None:intergenic 20.0%
!! TATAAATTAATGAGTAGTAC+CGG - chr2.2:19045052-19045071 None:intergenic 20.0%
!! TTCATGTTTGATTAGTAAAA+CGG + chr2.2:19044814-19044833 MS.gene039339:intron 20.0%
!!! AATTTTGGTATTTTTATGTG+AGG + chr2.2:19045357-19045376 MS.gene039339:intron 20.0%
!!! CTTATCCATTTTACTTATAA+TGG - chr2.2:19046159-19046178 None:intergenic 20.0%
!!! TGAGTTAAAGTTTTGTTTTT+TGG + chr2.2:19043952-19043971 MS.gene039339:intron 20.0%
!!! TGATTTTCAATACATATCAT+TGG + chr2.2:19045287-19045306 MS.gene039339:CDS 20.0%
!!! TTAAATGATTTTGTCTAATG+TGG + chr2.2:19045114-19045133 MS.gene039339:intron 20.0%
!!! TTATTTTTTAGCTTCTCTAA+TGG + chr2.2:19044841-19044860 MS.gene039339:intron 20.0%
!!! TTCTTTTGTTTGTTTTGTTA+AGG - chr2.2:19045011-19045030 None:intergenic 20.0%
! AAAGTTCTATCACACTAAAT+GGG - chr2.2:19044185-19044204 None:intergenic 25.0%
! AACTCAGATTAATGTAATGT+TGG + chr2.2:19044484-19044503 MS.gene039339:intron 25.0%
! AGTTGGGAATGAATTAATTA+AGG + chr2.2:19045441-19045460 MS.gene039339:CDS 25.0%
! ATGAAAATTCTAGTGGAAAA+GGG + chr2.2:19046066-19046085 MS.gene039339:intron 25.0%
! GAATGAATTAATTAAGGAGA+TGG + chr2.2:19045447-19045466 MS.gene039339:CDS 25.0%
! GTTATTATCTTTATGACTTG+TGG + chr2.2:19045629-19045648 MS.gene039339:intron 25.0%
! TAACTCAAATATAACTACCT+TGG - chr2.2:19043939-19043958 None:intergenic 25.0%
! TAGTAACACATAGTTGAAAA+TGG - chr2.2:19044312-19044331 None:intergenic 25.0%
! TATTTCAATGTTTCACAGAT+GGG + chr2.2:19045408-19045427 MS.gene039339:intron 25.0%
! TCATGTTTGATTAGTAAAAC+GGG + chr2.2:19044815-19044834 MS.gene039339:intron 25.0%
! TTATTTCAATGTTTCACAGA+TGG + chr2.2:19045407-19045426 MS.gene039339:intron 25.0%
! TTGGTTCATGATAAAGAAAA+AGG + chr2.2:19045205-19045224 MS.gene039339:CDS 25.0%
!! AAGAAAAAGGAAGAATTTTG+AGG + chr2.2:19045218-19045237 MS.gene039339:CDS 25.0%
!! TTTGGAATGTATCTTCAAAT+GGG + chr2.2:19043970-19043989 MS.gene039339:intron 25.0%
!! TTTTCAATACATATCATTGG+TGG + chr2.2:19045290-19045309 MS.gene039339:CDS 25.0%
!! TTTTGTCTAATGTGGTTTTT+TGG + chr2.2:19045122-19045141 MS.gene039339:intron 25.0%
!! TTTTTGTGATAGAAACAATG+TGG - chr2.2:19044721-19044740 None:intergenic 25.0%
!!! AAGTTTTTGGAAAGATACAA+AGG + chr2.2:19044890-19044909 MS.gene039339:CDS 25.0%
!!! TTGTGTTTAATTTGACCAAA+AGG + chr2.2:19044654-19044673 MS.gene039339:intron 25.0%
!!! TTGTTGTTGGTATGATTTTT+GGG + chr2.2:19044049-19044068 MS.gene039339:intron 25.0%
!!! TTTGTCTAATGTGGTTTTTT+GGG + chr2.2:19045123-19045142 MS.gene039339:intron 25.0%
!!! TTTTGGAATGTATCTTCAAA+TGG + chr2.2:19043969-19043988 MS.gene039339:intron 25.0%
AACATTTCATTCCAAGTATC+AGG - chr2.2:19046302-19046321 None:intergenic 30.0%
AATATGAAGCTTCAATCATG+TGG + chr2.2:19045158-19045177 MS.gene039339:CDS 30.0%
AATTAAGGAGATGGATCATT+TGG + chr2.2:19045456-19045475 MS.gene039339:CDS 30.0%
AGACTTTGATTAAGAGATCA+GGG + chr2.2:19044604-19044623 MS.gene039339:intron 30.0%
AGGAAAGAAGATAATGTTTG+TGG + chr2.2:19044910-19044929 MS.gene039339:CDS 30.0%
CAAAGTTCTATCACACTAAA+TGG - chr2.2:19044186-19044205 None:intergenic 30.0%
CAATCATGTGGTTGAAAAAT+GGG + chr2.2:19045170-19045189 MS.gene039339:CDS 30.0%
CATGAAAATTCTAGTGGAAA+AGG + chr2.2:19046065-19046084 MS.gene039339:intron 30.0%
CATTCAGGAAAAGAAGAAAA+GGG - chr2.2:19046044-19046063 None:intergenic 30.0%
GAATGACATGAAAATTCTAG+TGG + chr2.2:19046059-19046078 MS.gene039339:intron 30.0%
GGAAAGAAGATAATGTTTGT+GGG + chr2.2:19044911-19044930 MS.gene039339:CDS 30.0%
GTGGTTAACAATGATCATTA+TGG - chr2.2:19044702-19044721 None:intergenic 30.0%
TAAGATTGGATTAAGCACTT+GGG + chr2.2:19045486-19045505 MS.gene039339:CDS 30.0%
TCAATCATGTGGTTGAAAAA+TGG + chr2.2:19045169-19045188 MS.gene039339:CDS 30.0%
TCATTCAGGAAAAGAAGAAA+AGG - chr2.2:19046045-19046064 None:intergenic 30.0%
TTAAGATTGGATTAAGCACT+TGG + chr2.2:19045485-19045504 MS.gene039339:CDS 30.0%
TTGGAATGAAATGTTGTATG+CGG + chr2.2:19046307-19046326 MS.gene039339:CDS 30.0%
! CTAGAATTTTCATGTCATTC+AGG - chr2.2:19046059-19046078 None:intergenic 30.0%
! CTCTAATGGTTTTTGTTAAC+AGG + chr2.2:19044855-19044874 MS.gene039339:intron 30.0%
! GTTTTTGTTAACAGGTTTGA+TGG + chr2.2:19044863-19044882 MS.gene039339:intron 30.0%
!! AACTTTGTTGTTGTTGTTGT+TGG + chr2.2:19044199-19044218 MS.gene039339:intron 30.0%
!! GTTGTTGTTGGTATGATTTT+TGG + chr2.2:19044048-19044067 MS.gene039339:intron 30.0%
!! TTTGTTGTTGTTGTTGTTGT+TGG + chr2.2:19044036-19044055 MS.gene039339:intron 30.0%
!!! AAAAGGAAGAATTTTGAGGT+TGG + chr2.2:19045222-19045241 MS.gene039339:CDS 30.0%
!!! AGATGGGATTATTTTCAAGT+TGG + chr2.2:19045424-19045443 MS.gene039339:intron 30.0%
!!! CATTTGGAAGCTTTTAAGAT+TGG + chr2.2:19045472-19045491 MS.gene039339:CDS 30.0%
!!! GATGGGATTATTTTCAAGTT+GGG + chr2.2:19045425-19045444 MS.gene039339:intron 30.0%
!!! TGATTTTTGGGTGAAACTAT+AGG + chr2.2:19044061-19044080 MS.gene039339:intron 30.0%
!!! TTGTCTAATGTGGTTTTTTG+GGG + chr2.2:19045124-19045143 MS.gene039339:intron 30.0%
AAATCCAGACATTCATTGAG+TGG - chr2.2:19045607-19045626 None:intergenic 35.0%
AATGTTGGAATCAACCCATT+TGG - chr2.2:19045512-19045531 None:intergenic 35.0%
ACATTAAACCCTCAATTCCA+CGG + chr2.2:19045866-19045885 MS.gene039339:intron 35.0%
AGACAAACTAAACCAGATCA+AGG + chr2.2:19046095-19046114 MS.gene039339:CDS 35.0%
CAACCATGTGATTATTCTCA+AGG + chr2.2:19043750-19043769 MS.gene039339:CDS 35.0%
CTTGGAAGATTACAACTAGA+GGG - chr2.2:19043921-19043940 None:intergenic 35.0%
GAGACTTTGATTAAGAGATC+AGG + chr2.2:19044603-19044622 MS.gene039339:intron 35.0%
TATGTGTGATAGTTTCGTGT+TGG + chr2.2:19045746-19045765 MS.gene039339:intron 35.0%
TCAAAACCTTGACCAATGAA+AGG - chr2.2:19043846-19043865 None:intergenic 35.0%
TCACTTTGCTAACACAGTTA+AGG + chr2.2:19046198-19046217 MS.gene039339:CDS 35.0%
TTCATGTGATAGAAACAACG+TGG - chr2.2:19044575-19044594 None:intergenic 35.0%
TTGCCTTGAGAATAATCACA+TGG - chr2.2:19043756-19043775 None:intergenic 35.0%
TTTGCTAACACAGTTAAGGA+GGG + chr2.2:19046202-19046221 MS.gene039339:CDS 35.0%
TTTGTTAACAGGTTTGATGG+TGG + chr2.2:19044866-19044885 MS.gene039339:intron 35.0%
! AAACAAGACTCTAGTCTTTG+AGG - chr2.2:19045539-19045558 None:intergenic 35.0%
! AACAAGACTCTAGTCTTTGA+GGG - chr2.2:19045538-19045557 None:intergenic 35.0%
! AACTATGTGTTACTAAGACC+GGG + chr2.2:19044317-19044336 MS.gene039339:intron 35.0%
! AGACCTTGTTTAAGAGATCT+GGG + chr2.2:19044750-19044769 MS.gene039339:intron 35.0%
! CAACTATGTGTTACTAAGAC+CGG + chr2.2:19044316-19044335 MS.gene039339:intron 35.0%
! CTCAATGAATGTCTGGATTT+TGG + chr2.2:19045607-19045626 MS.gene039339:intron 35.0%
! CTTCAGATTAAAAGTGTGTC+CGG - chr2.2:19045805-19045824 None:intergenic 35.0%
! GTTGAAAAATGGGTTCTTAG+TGG + chr2.2:19045180-19045199 MS.gene039339:CDS 35.0%
! TACTAGCTTCAGCATTTCTA+TGG + chr2.2:19043703-19043722 MS.gene039339:CDS 35.0%
! TTGTTAACAGGTTTGATGGT+GGG + chr2.2:19044867-19044886 MS.gene039339:intron 35.0%
!! AAAGACTAGAGTCTTGTTTC+AGG + chr2.2:19045540-19045559 MS.gene039339:CDS 35.0%
!! AAATGGGTTCTTAGTGGATT+TGG + chr2.2:19045186-19045205 MS.gene039339:CDS 35.0%
!! AAGACTAGAGTCTTGTTTCA+GGG + chr2.2:19045541-19045560 MS.gene039339:CDS 35.0%
!! ATGCAGCTAACTTTTGTTGT+TGG - chr2.2:19044409-19044428 None:intergenic 35.0%
!! TTGTTGGTGGTGTATGATAT+TGG + chr2.2:19044215-19044234 MS.gene039339:intron 35.0%
!! TTTGTTGTTGTTGTTGTTGG+TGG + chr2.2:19044202-19044221 MS.gene039339:intron 35.0%
!!! GGTTTTGATTGTCTTGGAAA+TGG + chr2.2:19043858-19043877 MS.gene039339:CDS 35.0%
!!! TGTCTAATGTGGTTTTTTGG+GGG + chr2.2:19045125-19045144 MS.gene039339:intron 35.0%
ACTCACTGTGTTCTCAATTC+CGG + chr2.2:19045030-19045049 MS.gene039339:CDS 40.0%
ACTCCATAAGCAACAACATG+TGG + chr2.2:19044936-19044955 MS.gene039339:CDS 40.0%
AGACCCAGATCTCTTAAACA+AGG - chr2.2:19044756-19044775 None:intergenic 40.0%
ATGTGAGGAATTTGAGCATG+TGG + chr2.2:19045372-19045391 MS.gene039339:intron 40.0%
ATTAAGCACTTGGGCCAAAT+GGG + chr2.2:19045495-19045514 MS.gene039339:CDS 40.0%
CAATTAGCTCAGGGAATCAA+TGG + chr2.2:19045248-19045267 MS.gene039339:CDS 40.0%
CCTCTAGTTGTAATCTTCCA+AGG + chr2.2:19043919-19043938 MS.gene039339:CDS 40.0%
CCTTGGAAGATTACAACTAG+AGG - chr2.2:19043922-19043941 None:intergenic 40.0%
CTAGTAGCAGAGAACATAGT+TGG - chr2.2:19043689-19043708 None:intergenic 40.0%
CTCTGACACGTAATAGACAT+CGG + chr2.2:19045778-19045797 MS.gene039339:intron 40.0%
CTTTGCTAACACAGTTAAGG+AGG + chr2.2:19046201-19046220 MS.gene039339:CDS 40.0%
GAATTTGAGCATGTGGCTAA+TGG + chr2.2:19045379-19045398 MS.gene039339:intron 40.0%
GTGATGTCAAGCAATTGTAC+TGG - chr2.2:19046182-19046201 None:intergenic 40.0%
GTGATTATTCTCAAGGCAAC+TGG + chr2.2:19043757-19043776 MS.gene039339:CDS 40.0%
GTTAGACTCGGATGAATGTA+AGG + chr2.2:19044631-19044650 MS.gene039339:intron 40.0%
TACATTAGCCCAAGTGAAAC+TGG - chr2.2:19044351-19044370 None:intergenic 40.0%
TCAAAGGACTGTCCTTTCAT+TGG + chr2.2:19043831-19043850 MS.gene039339:CDS 40.0%
TCACATGGTTGTTGTAGAGA+AGG - chr2.2:19043741-19043760 None:intergenic 40.0%
TCTATTACGTGTCAGAGAGT+CGG - chr2.2:19045775-19045794 None:intergenic 40.0%
TCTTCCACTCAATGAATGTC+TGG + chr2.2:19045600-19045619 MS.gene039339:intron 40.0%
! ACTATGTGTTACTAAGACCG+GGG + chr2.2:19044318-19044337 MS.gene039339:intron 40.0%
! AGTCTTTGAGGGTTCAATGT+TGG - chr2.2:19045527-19045546 None:intergenic 40.0%
! GAGACCTTGTTTAAGAGATC+TGG + chr2.2:19044749-19044768 MS.gene039339:intron 40.0%
! TTGCCACATGTTGTTGCTTA+TGG - chr2.2:19044942-19044961 None:intergenic 40.0%
!! CCTTTGAAGCATCATAGAGA+GGG - chr2.2:19043818-19043837 None:intergenic 40.0%
!! TATCATTGGTGGACTCATAC+TGG + chr2.2:19045301-19045320 MS.gene039339:CDS 40.0%
!! TCCTTTGAAGCATCATAGAG+AGG - chr2.2:19043819-19043838 None:intergenic 40.0%
!!! GGTCAAGGTTTTGATTGTCT+TGG + chr2.2:19043852-19043871 MS.gene039339:CDS 40.0%
!!! GTCTAATGTGGTTTTTTGGG+GGG + chr2.2:19045126-19045145 MS.gene039339:intron 40.0%
!!! GTTTGATGGTGGGAAGTTTT+TGG + chr2.2:19044877-19044896 MS.gene039339:CDS 40.0%
AATCTGAGCCGTGGAATTGA+GGG - chr2.2:19045877-19045896 None:intergenic 45.0%
ACACGTAATAGACATCGGAC+CGG + chr2.2:19045783-19045802 MS.gene039339:intron 45.0%
ACAGTGTCTACACCAGGATA+AGG - chr2.2:19046131-19046150 None:intergenic 45.0%
AGACTCAGATCCCTCAAACA+AGG - chr2.2:19044459-19044478 None:intergenic 45.0%
AGCTCAGGGAATCAATGGAA+AGG + chr2.2:19045253-19045272 MS.gene039339:CDS 45.0%
AGGTTGGACACAATTAGCTC+AGG + chr2.2:19045238-19045257 MS.gene039339:CDS 45.0%
AGTCCACATAACTTTCACCG+CGG - chr2.2:19046253-19046272 None:intergenic 45.0%
ATCATAGAGAGGGTAGGAGA+AGG - chr2.2:19043808-19043827 None:intergenic 45.0%
CCCTCTCTATGATGCTTCAA+AGG + chr2.2:19043815-19043834 MS.gene039339:CDS 45.0%
CTAACACAGTTAAGGAGGGA+TGG + chr2.2:19046206-19046225 MS.gene039339:CDS 45.0%
GACTGTCCTTTCATTGGTCA+AGG + chr2.2:19043837-19043856 MS.gene039339:CDS 45.0%
GATCAGGGTCTAGTTAGACT+CGG + chr2.2:19044619-19044638 MS.gene039339:intron 45.0%
GATTAAGCACTTGGGCCAAA+TGG + chr2.2:19045494-19045513 MS.gene039339:CDS 45.0%
GGTTGGACACAATTAGCTCA+GGG + chr2.2:19045239-19045258 MS.gene039339:CDS 45.0%
GTAGCAGAGAACATAGTTGG+TGG - chr2.2:19043686-19043705 None:intergenic 45.0%
GTCTTTACAGTGTCTACACC+AGG - chr2.2:19046137-19046156 None:intergenic 45.0%
TTGCTGGTGTTCCTGATACT+TGG + chr2.2:19046288-19046307 MS.gene039339:CDS 45.0%
! AACCTCGAGACCTTGTTTGA+GGG + chr2.2:19044446-19044465 MS.gene039339:intron 45.0%
! TGAAGCATCATAGAGAGGGT+AGG - chr2.2:19043814-19043833 None:intergenic 45.0%
AGCCCAAGTGAAACTGGACT+CGG - chr2.2:19044345-19044364 None:intergenic 50.0%
ATCCCTCAAACAAGGTCTCG+AGG - chr2.2:19044451-19044470 None:intergenic 50.0%
ATTGCAACGTGTTGCGATCG+TGG + chr2.2:19045841-19045860 MS.gene039339:intron 50.0%
CACAACTAGAATCTGAGCCG+TGG - chr2.2:19045886-19045905 None:intergenic 50.0%
GAATCTGAGCCGTGGAATTG+AGG - chr2.2:19045878-19045897 None:intergenic 50.0%
GGATCAATGCCACCTTATCC+TGG + chr2.2:19046116-19046135 MS.gene039339:CDS 50.0%
GTCCGAGTCCAGTTTCACTT+GGG + chr2.2:19044340-19044359 MS.gene039339:intron 50.0%
GTGTCTACACCAGGATAAGG+TGG - chr2.2:19046128-19046147 None:intergenic 50.0%
! CAACCTCGAGACCTTGTTTG+AGG + chr2.2:19044445-19044464 MS.gene039339:intron 50.0%
! GTTATGTGGACTGCAGTCAC+TGG + chr2.2:19046261-19046280 MS.gene039339:CDS 50.0%
!! GGTGGCATTGATCCTTGATC+TGG - chr2.2:19046110-19046129 None:intergenic 50.0%
CACATAACTTTCACCGCGGC+CGG - chr2.2:19046249-19046268 None:intergenic 55.0%
GAGAGGGTAGGAGAAGGTAG+TGG - chr2.2:19043802-19043821 None:intergenic 55.0%
GGTCACCCGTCTATCTACAC+CGG + chr2.2:19046227-19046246 MS.gene039339:CDS 55.0%
GGTCCGAGTCCAGTTTCACT+TGG + chr2.2:19044339-19044358 MS.gene039339:intron 55.0%
TGCAGTCACTGGTGTCTTGC+TGG + chr2.2:19046272-19046291 MS.gene039339:CDS 55.0%
! CTCGAGGTTGAGCATTGCGA+TGG - chr2.2:19044435-19044454 None:intergenic 55.0%
!!! GGTTTTTTGGGGGGTGTCGT+AGG + chr2.2:19045135-19045154 MS.gene039339:intron 55.0%
CGGCCGCGGTGAAAGTTATG+TGG + chr2.2:19046247-19046266 MS.gene039339:CDS 60.0%
GTGAAACTGGACTCGGACCC+CGG - chr2.2:19044338-19044357 None:intergenic 60.0%
CCGCGGCCGGTGTAGATAGA+CGG - chr2.2:19046236-19046255 None:intergenic 65.0%
CCGTCTATCTACACCGGCCG+CGG + chr2.2:19046233-19046252 MS.gene039339:CDS 65.0%
CGCGGCCGGTGTAGATAGAC+GGG - chr2.2:19046235-19046254 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 19043669 19046346 19043669 ID=MS.gene039339
chr2.2 mRNA 19043669 19046346 19043669 ID=MS.gene039339.t1;Parent=MS.gene039339
chr2.2 exon 19043669 19043940 19043669 ID=MS.gene039339.t1.exon1;Parent=MS.gene039339.t1
chr2.2 CDS 19043669 19043940 19043669 ID=cds.MS.gene039339.t1;Parent=MS.gene039339.t1
chr2.2 exon 19044877 19045051 19044877 ID=MS.gene039339.t1.exon2;Parent=MS.gene039339.t1
chr2.2 CDS 19044877 19045051 19044877 ID=cds.MS.gene039339.t1;Parent=MS.gene039339.t1
chr2.2 exon 19045157 19045335 19045157 ID=MS.gene039339.t1.exon3;Parent=MS.gene039339.t1
chr2.2 CDS 19045157 19045335 19045157 ID=cds.MS.gene039339.t1;Parent=MS.gene039339.t1
chr2.2 exon 19045426 19045584 19045426 ID=MS.gene039339.t1.exon4;Parent=MS.gene039339.t1
chr2.2 CDS 19045426 19045584 19045426 ID=cds.MS.gene039339.t1;Parent=MS.gene039339.t1
chr2.2 exon 19046079 19046346 19046079 ID=MS.gene039339.t1.exon5;Parent=MS.gene039339.t1
chr2.2 CDS 19046079 19046346 19046079 ID=cds.MS.gene039339.t1;Parent=MS.gene039339.t1
Gene Sequence

>MS.gene039339

ATGTCACTCACATTCCACCAACTATGTTCTCTGCTACTAGCTTCAGCATTTCTATGGACACTACTGCAACCTTCTCTACAACAACCATGTGATTATTCTCAAGGCAACTGGCTCATTGATGATGATGATTCCACTACCTTCTCCTACCCTCTCTATGATGCTTCAAAGGACTGTCCTTTCATTGGTCAAGGTTTTGATTGTCTTGGAAATGGTAGAACTGATAAAGATTATATCAAGTATAGATGGAAGCCCTCTAGTTGTAATCTTCCAAGGTAGTTATATTTGAGTTAAAGTTTTGTTTTTTGGAATGTATCTTCAAATGGGTAGTGACCAAAGTTCTTGTTTTTATTTTCTCATTTTTTTATGTTTTGTTGTTGTTGTTGTTGTTGGTATGATTTTTGGGTGAAACTATAGGAGAAAGTGATAAGAAAAGTATAAAAAAAATAAAAATTGAATGAGTTGGATAGAAATATAGTATATAAAATTATGACATTTTTTGATCTATATAGACGACCCATTTAGTGTGATAGAACTTTGTTGTTGTTGTTGTTGGTGGTGTATGATATTGGTGTGAAGTTTCAACTGATTTGTTGATAACTAAAGTTTTCAAGAACTTAGCTGTCAATTTTTAGTGAAAACTCCATTTTCAACTATGTGTTACTAAGACCGGGGTCCGAGTCCAGTTTCACTTGGGCTAATGTAACGCAATGTAATGTTAATTCACTGTTTATGTTTAACCAACAACAAAAGTTAGCTGCATTTTCCATCGCAATGCTCAACCTCGAGACCTTGTTTGAGGGATCTGAGTCTAACTAAACTCAGATTAATGTAATGTTGGTAATTCTATATTTATGCTTACTTAGCAAAAAAGTAAAATTTTTTGCTTACATAGACTTTTATTAACCACGTTGTTTCTATCACATGAATCAAACTCGAGACTTTGATTAAGAGATCAGGGTCTAGTTAGACTCGGATGAATGTAAGGTTGTGTTTAATTTGACCAAAAGGAATTTTTTTATTTTTTTTACATCCATAATGATCATTGTTAACCACATTGTTTCTATCACAAAAATCTAACATGAGACCTTGTTTAAGAGATCTGGGTCTAGTTAGACTTAGATGAATGTATTGTTGATAATTCAATCTTCATGTTTGATTAGTAAAACGGGAACTTATTTTTTAGCTTCTCTAATGGTTTTTGTTAACAGGTTTGATGGTGGGAAGTTTTTGGAAAGATACAAAGGAAAGAAGATAATGTTTGTGGGAGACTCCATAAGCAACAACATGTGGCAATCACTCACTTGTTTGCTTCACATTGCAATCCCAAATTCAAATTATACCTTAACAAAACAAACAAAAGAACTCACTGTGTTCTCAATTCCGGTACTACTCATTAATTTATATTTGCATTACAAAAAAATGTGTTTTTTTAATTGTTTGATTAGTTAAATGATTTTGTCTAATGTGGTTTTTTGGGGGGTGTCGTAGGAATATGAAGCTTCAATCATGTGGTTGAAAAATGGGTTCTTAGTGGATTTGGTTCATGATAAAGAAAAAGGAAGAATTTTGAGGTTGGACACAATTAGCTCAGGGAATCAATGGAAAGGTTTTGATGTTTTGATTTTCAATACATATCATTGGTGGACTCATACTGGAAATTCTCAAACGTATTGAAATTTTTTAACTCAAATTTTGGTATTTTTATGTGAGGAATTTGAGCATGTGGCTAATGGTTTTTTTATTTCAATGTTTCACAGATGGGATTATTTTCAAGTTGGGAATGAATTAATTAAGGAGATGGATCATTTGGAAGCTTTTAAGATTGGATTAAGCACTTGGGCCAAATGGGTTGATTCCAACATTGAACCCTCAAAGACTAGAGTCTTGTTTCAGGGAATTGCTGCTTCTCATGTTGAGTAAGTTTAACTGTTTCTTCCACTCAATGAATGTCTGGATTTTGGTTATTATCTTTATGACTTGTGGTCTATGAAGCAGTGTCATAGATGCATACACTAGATACGACACTAACACATCGACACGTATAATTGTTTGAAATTTGAAAGAAATGAATGTAAATTATGTGTGATAGTTTCGTGTTGGTGTCCGACTCTCTGACACGTAATAGACATCGGACCGGACACACTTTTAATCTGAAGTCTAATTGCTGCATAGATTGCAACGTGTTGCGATCGTGGCAACATTAAACCCTCAATTCCACGGCTCAGATTCTAGTTGTGACCTTTTGTTAAAATCTTGATTATAAGTATTATGTGAAGAGAGATCATAGAAAGACATTTGAGACACTGAATTTTATTATGATGAAATGGTAATATTGATTATGAAAGTATATACTCAAAGACTCACTCTTTTTTCCCTTTTCTTCTTTTCCTGAATGACATGAAAATTCTAGTGGAAAAGGGTGCTTGAGACAAACTAAACCAGATCAAGGATCAATGCCACCTTATCCTGGTGTAGACACTGTAAAGACCATTATAAGTAAAATGGATAAGCCAGTACAATTGCTTGACATCACTTTGCTAACACAGTTAAGGAGGGATGGTCACCCGTCTATCTACACCGGCCGCGGTGAAAGTTATGTGGACTGCAGTCACTGGTGTCTTGCTGGTGTTCCTGATACTTGGAATGAAATGTTGTATGCGGCTCTTCTTGAAGATTAG
Protein sequence

>MS.gene039339.t1

MSLTFHQLCSLLLASAFLWTLLQPSLQQPCDYSQGNWLIDDDDSTTFSYPLYDASKDCPFIGQGFDCLGNGRTDKDYIKYRWKPSSCNLPRFDGGKFLERYKGKKIMFVGDSISNNMWQSLTCLLHIAIPNSNYTLTKQTKELTVFSIPEYEASIMWLKNGFLVDLVHDKEKGRILRLDTISSGNQWKGFDVLIFNTYHWWTHTGNSQTWDYFQVGNELIKEMDHLEAFKIGLSTWAKWVDSNIEPSKTRVLFQGIAASHVDGKGCLRQTKPDQGSMPPYPGVDTVKTIISKMDKPVQLLDITLLTQLRRDGHPSIYTGRGESYVDCSHWCLAGVPDTWNEMLYAALLED