Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39565.t1 | XP_003608140.2 | 96.7 | 332 | 10 | 1 | 1 | 332 | 22 | 352 | 4.10E-196 | 693.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39565.t1 | Q8VY22 | 66.0 | 329 | 109 | 3 | 5 | 332 | 54 | 380 | 2.4e-136 | 486.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39565.t1 | G7JPR2 | 96.7 | 332 | 10 | 1 | 1 | 332 | 22 | 352 | 2.9e-196 | 693.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene39565 | 0.816884 | 4.39E-52 | -1.69E-46 |
| MS.gene049171 | MS.gene39565 | 0.814973 | 1.17E-51 | -1.69E-46 |
| MS.gene049173 | MS.gene39565 | 0.850289 | 1.87E-60 | -1.69E-46 |
| MS.gene049217 | MS.gene39565 | 0.854935 | 8.84E-62 | -1.69E-46 |
| MS.gene049222 | MS.gene39565 | 0.840278 | 9.58E-58 | -1.69E-46 |
| MS.gene049285 | MS.gene39565 | 0.850056 | 2.17E-60 | -1.69E-46 |
| MS.gene049320 | MS.gene39565 | 0.844488 | 7.33E-59 | -1.69E-46 |
| MS.gene049369 | MS.gene39565 | 0.82908 | 6.29E-55 | -1.69E-46 |
| MS.gene049427 | MS.gene39565 | 0.848831 | 4.77E-60 | -1.69E-46 |
| MS.gene049609 | MS.gene39565 | 0.857816 | 1.26E-62 | -1.69E-46 |
| MS.gene049614 | MS.gene39565 | 0.809394 | 1.93E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene39565 | 0.850906 | 1.25E-60 | -1.69E-46 |
| MS.gene050076 | MS.gene39565 | 0.832787 | 7.74E-56 | -1.69E-46 |
| MS.gene050163 | MS.gene39565 | 0.833225 | 6.02E-56 | -1.69E-46 |
| MS.gene050165 | MS.gene39565 | 0.822629 | 2.14E-53 | -1.69E-46 |
| MS.gene050333 | MS.gene39565 | 0.848159 | 7.32E-60 | -1.69E-46 |
| MS.gene050432 | MS.gene39565 | 0.875693 | 2.52E-68 | -1.69E-46 |
| MS.gene050444 | MS.gene39565 | 0.809016 | 2.33E-50 | -1.69E-46 |
| MS.gene050504 | MS.gene39565 | 0.808691 | 2.74E-50 | -1.69E-46 |
| MS.gene050520 | MS.gene39565 | 0.801908 | 7.21E-49 | -1.69E-46 |
| MS.gene050538 | MS.gene39565 | 0.831347 | 1.76E-55 | -1.69E-46 |
| MS.gene050593 | MS.gene39565 | 0.822305 | 2.54E-53 | -1.69E-46 |
| MS.gene050612 | MS.gene39565 | 0.816935 | 4.28E-52 | -1.69E-46 |
| MS.gene050686 | MS.gene39565 | 0.80818 | 3.51E-50 | -1.69E-46 |
| MS.gene050699 | MS.gene39565 | 0.803708 | 3.06E-49 | -1.69E-46 |
| MS.gene050747 | MS.gene39565 | 0.813341 | 2.69E-51 | -1.69E-46 |
| MS.gene050767 | MS.gene39565 | 0.861865 | 7.59E-64 | -1.69E-46 |
| MS.gene050770 | MS.gene39565 | 0.866692 | 2.37E-65 | -1.69E-46 |
| MS.gene050772 | MS.gene39565 | 0.877647 | 5.32E-69 | -1.69E-46 |
| MS.gene05080 | MS.gene39565 | 0.808075 | 3.70E-50 | -1.69E-46 |
| MS.gene05081 | MS.gene39565 | 0.809624 | 1.73E-50 | -1.69E-46 |
| MS.gene050950 | MS.gene39565 | 0.80741 | 5.12E-50 | -1.69E-46 |
| MS.gene05100 | MS.gene39565 | 0.820259 | 7.54E-53 | -1.69E-46 |
| MS.gene05105 | MS.gene39565 | 0.839845 | 1.24E-57 | -1.69E-46 |
| MS.gene051228 | MS.gene39565 | 0.868206 | 7.76E-66 | -1.69E-46 |
| MS.gene051387 | MS.gene39565 | 0.817209 | 3.71E-52 | -1.69E-46 |
| MS.gene051617 | MS.gene39565 | 0.808437 | 3.10E-50 | -1.69E-46 |
| MS.gene051666 | MS.gene39565 | 0.845368 | 4.24E-59 | -1.69E-46 |
| MS.gene051692 | MS.gene39565 | 0.843614 | 1.26E-58 | -1.69E-46 |
| MS.gene051694 | MS.gene39565 | 0.82715 | 1.83E-54 | -1.69E-46 |
| MS.gene051810 | MS.gene39565 | 0.85546 | 6.21E-62 | -1.69E-46 |
| MS.gene051858 | MS.gene39565 | 0.859461 | 4.07E-63 | -1.69E-46 |
| MS.gene051877 | MS.gene39565 | 0.808848 | 2.53E-50 | -1.69E-46 |
| MS.gene051949 | MS.gene39565 | 0.814385 | 1.58E-51 | -1.69E-46 |
| MS.gene052078 | MS.gene39565 | 0.801708 | 7.93E-49 | -1.69E-46 |
| MS.gene052271 | MS.gene39565 | 0.855187 | 7.46E-62 | -1.69E-46 |
| MS.gene052290 | MS.gene39565 | 0.819299 | 1.25E-52 | -1.69E-46 |
| MS.gene052310 | MS.gene39565 | 0.819539 | 1.10E-52 | -1.69E-46 |
| MS.gene052322 | MS.gene39565 | 0.805598 | 1.24E-49 | -1.69E-46 |
| MS.gene052379 | MS.gene39565 | 0.876065 | 1.88E-68 | -1.69E-46 |
| MS.gene052421 | MS.gene39565 | 0.810199 | 1.30E-50 | -1.69E-46 |
| MS.gene052481 | MS.gene39565 | 0.836616 | 8.43E-57 | -1.69E-46 |
| MS.gene052484 | MS.gene39565 | 0.879202 | 1.51E-69 | -1.69E-46 |
| MS.gene052485 | MS.gene39565 | 0.823721 | 1.19E-53 | -1.69E-46 |
| MS.gene052615 | MS.gene39565 | 0.824955 | 6.10E-54 | -1.69E-46 |
| MS.gene052870 | MS.gene39565 | 0.849552 | 3.00E-60 | -1.69E-46 |
| MS.gene052872 | MS.gene39565 | 0.84097 | 6.31E-58 | -1.69E-46 |
| MS.gene052916 | MS.gene39565 | 0.809212 | 2.12E-50 | -1.69E-46 |
| MS.gene053009 | MS.gene39565 | 0.810709 | 1.01E-50 | -1.69E-46 |
| MS.gene053103 | MS.gene39565 | 0.857396 | 1.68E-62 | -1.69E-46 |
| MS.gene053104 | MS.gene39565 | 0.888506 | 5.56E-73 | -1.69E-46 |
| MS.gene053107 | MS.gene39565 | 0.827885 | 1.22E-54 | -1.69E-46 |
| MS.gene053207 | MS.gene39565 | 0.856704 | 2.69E-62 | -1.69E-46 |
| MS.gene053209 | MS.gene39565 | 0.835739 | 1.41E-56 | -1.69E-46 |
| MS.gene053213 | MS.gene39565 | 0.859903 | 3.00E-63 | -1.69E-46 |
| MS.gene053286 | MS.gene39565 | 0.851873 | 6.68E-61 | -1.69E-46 |
| MS.gene053322 | MS.gene39565 | 0.868662 | 5.53E-66 | -1.69E-46 |
| MS.gene053384 | MS.gene39565 | 0.824383 | 8.31E-54 | -1.69E-46 |
| MS.gene053449 | MS.gene39565 | 0.834236 | 3.37E-56 | -1.69E-46 |
| MS.gene053574 | MS.gene39565 | 0.827944 | 1.18E-54 | -1.69E-46 |
| MS.gene053632 | MS.gene39565 | 0.848199 | 7.14E-60 | -1.69E-46 |
| MS.gene053813 | MS.gene39565 | 0.802115 | 6.54E-49 | -1.69E-46 |
| MS.gene053824 | MS.gene39565 | 0.831633 | 1.49E-55 | -1.69E-46 |
| MS.gene053916 | MS.gene39565 | 0.851317 | 9.60E-61 | -1.69E-46 |
| MS.gene054376 | MS.gene39565 | 0.836457 | 9.25E-57 | -1.69E-46 |
| MS.gene054408 | MS.gene39565 | 0.802278 | 6.05E-49 | -1.69E-46 |
| MS.gene054595 | MS.gene39565 | 0.801155 | 1.03E-48 | -1.69E-46 |
| MS.gene054600 | MS.gene39565 | 0.864141 | 1.50E-64 | -1.69E-46 |
| MS.gene054642 | MS.gene39565 | 0.870783 | 1.12E-66 | -1.69E-46 |
| MS.gene054802 | MS.gene39565 | 0.84541 | 4.13E-59 | -1.69E-46 |
| MS.gene054803 | MS.gene39565 | 0.843505 | 1.34E-58 | -1.69E-46 |
| MS.gene054804 | MS.gene39565 | 0.845239 | 4.60E-59 | -1.69E-46 |
| MS.gene05494 | MS.gene39565 | 0.800312 | 1.53E-48 | -1.69E-46 |
| MS.gene054955 | MS.gene39565 | 0.804621 | 1.98E-49 | -1.69E-46 |
| MS.gene05505 | MS.gene39565 | 0.856346 | 3.42E-62 | -1.69E-46 |
| MS.gene055154 | MS.gene39565 | -0.800656 | 1.30E-48 | -1.69E-46 |
| MS.gene055206 | MS.gene39565 | 0.873451 | 1.46E-67 | -1.69E-46 |
| MS.gene055212 | MS.gene39565 | 0.859365 | 4.35E-63 | -1.69E-46 |
| MS.gene055224 | MS.gene39565 | 0.82356 | 1.30E-53 | -1.69E-46 |
| MS.gene055254 | MS.gene39565 | 0.818253 | 2.16E-52 | -1.69E-46 |
| MS.gene055277 | MS.gene39565 | 0.817348 | 3.46E-52 | -1.69E-46 |
| MS.gene055289 | MS.gene39565 | 0.854081 | 1.56E-61 | -1.69E-46 |
| MS.gene055362 | MS.gene39565 | 0.839427 | 1.60E-57 | -1.69E-46 |
| MS.gene055397 | MS.gene39565 | 0.840875 | 6.68E-58 | -1.69E-46 |
| MS.gene055412 | MS.gene39565 | 0.825977 | 3.49E-54 | -1.69E-46 |
| MS.gene055499 | MS.gene39565 | 0.847098 | 1.43E-59 | -1.69E-46 |
| MS.gene055502 | MS.gene39565 | 0.831497 | 1.61E-55 | -1.69E-46 |
| MS.gene055577 | MS.gene39565 | 0.833394 | 5.47E-56 | -1.69E-46 |
| MS.gene055636 | MS.gene39565 | 0.854112 | 1.53E-61 | -1.69E-46 |
| MS.gene055638 | MS.gene39565 | 0.849243 | 3.66E-60 | -1.69E-46 |
| MS.gene055647 | MS.gene39565 | 0.839144 | 1.89E-57 | -1.69E-46 |
| MS.gene055722 | MS.gene39565 | 0.874112 | 8.71E-68 | -1.69E-46 |
| MS.gene05592 | MS.gene39565 | 0.883513 | 4.21E-71 | -1.69E-46 |
| MS.gene055941 | MS.gene39565 | 0.851974 | 6.26E-61 | -1.69E-46 |
| MS.gene055956 | MS.gene39565 | -0.810847 | 9.40E-51 | -1.69E-46 |
| MS.gene056374 | MS.gene39565 | 0.856979 | 2.23E-62 | -1.69E-46 |
| MS.gene056410 | MS.gene39565 | 0.843048 | 1.78E-58 | -1.69E-46 |
| MS.gene056422 | MS.gene39565 | 0.800503 | 1.40E-48 | -1.69E-46 |
| MS.gene056448 | MS.gene39565 | 0.803647 | 3.15E-49 | -1.69E-46 |
| MS.gene056449 | MS.gene39565 | 0.811581 | 6.52E-51 | -1.69E-46 |
| MS.gene056487 | MS.gene39565 | 0.838398 | 2.95E-57 | -1.69E-46 |
| MS.gene056511 | MS.gene39565 | 0.805046 | 1.61E-49 | -1.69E-46 |
| MS.gene056549 | MS.gene39565 | 0.806639 | 7.46E-50 | -1.69E-46 |
| MS.gene056609 | MS.gene39565 | 0.830472 | 2.88E-55 | -1.69E-46 |
| MS.gene056657 | MS.gene39565 | 0.849177 | 3.82E-60 | -1.69E-46 |
| MS.gene056796 | MS.gene39565 | 0.830563 | 2.74E-55 | -1.69E-46 |
| MS.gene056897 | MS.gene39565 | 0.835444 | 1.67E-56 | -1.69E-46 |
| MS.gene056947 | MS.gene39565 | 0.811367 | 7.25E-51 | -1.69E-46 |
| MS.gene057011 | MS.gene39565 | 0.843591 | 1.28E-58 | -1.69E-46 |
| MS.gene057076 | MS.gene39565 | 0.816414 | 5.60E-52 | -1.69E-46 |
| MS.gene057123 | MS.gene39565 | 0.80401 | 2.65E-49 | -1.69E-46 |
| MS.gene057129 | MS.gene39565 | 0.886481 | 3.29E-72 | -1.69E-46 |
| MS.gene057146 | MS.gene39565 | 0.820697 | 5.98E-53 | -1.69E-46 |
| MS.gene057295 | MS.gene39565 | 0.816115 | 6.53E-52 | -1.69E-46 |
| MS.gene057331 | MS.gene39565 | 0.857332 | 1.75E-62 | -1.69E-46 |
| MS.gene05735 | MS.gene39565 | 0.813493 | 2.49E-51 | -1.69E-46 |
| MS.gene057416 | MS.gene39565 | 0.85578 | 5.01E-62 | -1.69E-46 |
| MS.gene057658 | MS.gene39565 | 0.802944 | 4.41E-49 | -1.69E-46 |
| MS.gene057926 | MS.gene39565 | 0.869463 | 3.04E-66 | -1.69E-46 |
| MS.gene057927 | MS.gene39565 | 0.801629 | 8.23E-49 | -1.69E-46 |
| MS.gene058006 | MS.gene39565 | 0.840795 | 7.01E-58 | -1.69E-46 |
| MS.gene058019 | MS.gene39565 | 0.832004 | 1.21E-55 | -1.69E-46 |
| MS.gene058082 | MS.gene39565 | 0.803466 | 3.44E-49 | -1.69E-46 |
| MS.gene058293 | MS.gene39565 | 0.851256 | 9.99E-61 | -1.69E-46 |
| MS.gene058323 | MS.gene39565 | 0.855392 | 6.51E-62 | -1.69E-46 |
| MS.gene058338 | MS.gene39565 | 0.802466 | 5.54E-49 | -1.69E-46 |
| MS.gene05837 | MS.gene39565 | 0.804903 | 1.73E-49 | -1.69E-46 |
| MS.gene058419 | MS.gene39565 | 0.850984 | 1.19E-60 | -1.69E-46 |
| MS.gene058660 | MS.gene39565 | 0.807172 | 5.75E-50 | -1.69E-46 |
| MS.gene058723 | MS.gene39565 | 0.839076 | 1.97E-57 | -1.69E-46 |
| MS.gene058748 | MS.gene39565 | 0.800744 | 1.25E-48 | -1.69E-46 |
| MS.gene058773 | MS.gene39565 | 0.843103 | 1.72E-58 | -1.69E-46 |
| MS.gene058838 | MS.gene39565 | 0.812518 | 4.07E-51 | -1.69E-46 |
| MS.gene058840 | MS.gene39565 | -0.811314 | 7.45E-51 | -1.69E-46 |
| MS.gene059022 | MS.gene39565 | 0.824355 | 8.44E-54 | -1.69E-46 |
| MS.gene059023 | MS.gene39565 | 0.820271 | 7.49E-53 | -1.69E-46 |
| MS.gene059029 | MS.gene39565 | 0.850411 | 1.73E-60 | -1.69E-46 |
| MS.gene05913 | MS.gene39565 | 0.844596 | 6.85E-59 | -1.69E-46 |
| MS.gene05934 | MS.gene39565 | 0.853815 | 1.86E-61 | -1.69E-46 |
| MS.gene059536 | MS.gene39565 | 0.856768 | 2.57E-62 | -1.69E-46 |
| MS.gene059676 | MS.gene39565 | 0.822385 | 2.44E-53 | -1.69E-46 |
| MS.gene059677 | MS.gene39565 | 0.841568 | 4.39E-58 | -1.69E-46 |
| MS.gene059688 | MS.gene39565 | 0.837954 | 3.83E-57 | -1.69E-46 |
| MS.gene059692 | MS.gene39565 | 0.844408 | 7.70E-59 | -1.69E-46 |
| MS.gene059695 | MS.gene39565 | 0.846346 | 2.30E-59 | -1.69E-46 |
| MS.gene059711 | MS.gene39565 | 0.817027 | 4.08E-52 | -1.69E-46 |
| MS.gene059718 | MS.gene39565 | 0.837679 | 4.51E-57 | -1.69E-46 |
| MS.gene059858 | MS.gene39565 | 0.810784 | 9.70E-51 | -1.69E-46 |
| MS.gene059902 | MS.gene39565 | 0.857881 | 1.21E-62 | -1.69E-46 |
| MS.gene059960 | MS.gene39565 | 0.872176 | 3.89E-67 | -1.69E-46 |
| MS.gene060193 | MS.gene39565 | 0.862388 | 5.25E-64 | -1.69E-46 |
| MS.gene060403 | MS.gene39565 | 0.80159 | 8.38E-49 | -1.69E-46 |
| MS.gene060728 | MS.gene39565 | 0.808373 | 3.20E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene39565 | 0.826964 | 2.03E-54 | -1.69E-46 |
| MS.gene060804 | MS.gene39565 | 0.875056 | 4.16E-68 | -1.69E-46 |
| MS.gene060818 | MS.gene39565 | 0.865096 | 7.56E-65 | -1.69E-46 |
| MS.gene060835 | MS.gene39565 | 0.831075 | 2.05E-55 | -1.69E-46 |
| MS.gene060837 | MS.gene39565 | 0.839989 | 1.14E-57 | -1.69E-46 |
| MS.gene06092 | MS.gene39565 | 0.850246 | 1.92E-60 | -1.69E-46 |
| MS.gene061041 | MS.gene39565 | 0.859858 | 3.09E-63 | -1.69E-46 |
| MS.gene061051 | MS.gene39565 | -0.811063 | 8.44E-51 | -1.69E-46 |
| MS.gene061150 | MS.gene39565 | 0.835388 | 1.73E-56 | -1.69E-46 |
| MS.gene061200 | MS.gene39565 | 0.873936 | 9.99E-68 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene031625 | MS.gene39565 | PPI |
| MS.gene39565 | MS.gene065125 | PPI |
| MS.gene39565 | MS.gene039339 | PPI |
| MS.gene39565 | MS.gene31379 | PPI |
| MS.gene039341 | MS.gene39565 | PPI |
| MS.gene39565 | MS.gene028817 | PPI |
| MS.gene73821 | MS.gene39565 | PPI |
| MS.gene39565 | MS.gene72457 | PPI |
| MS.gene39565 | MS.gene54859 | PPI |
| MS.gene39565 | MS.gene71840 | PPI |
| MS.gene97826 | MS.gene39565 | PPI |
| MS.gene94488 | MS.gene39565 | PPI |
| MS.gene39565 | MS.gene043504 | PPI |
| MS.gene39565 | MS.gene72456 | PPI |
| MS.gene39565 | MS.gene006674 | PPI |
| MS.gene39565 | MS.gene97825 | PPI |
| MS.gene029396 | MS.gene39565 | PPI |
| MS.gene39565 | MS.gene76296 | PPI |
| MS.gene39565 | MS.gene045508 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39565.t1 | MTR_4g088030 | 96.687 | 332 | 10 | 1 | 1 | 332 | 22 | 352 | 0.0 | 670 |
| MS.gene39565.t1 | MTR_4g087730 | 86.890 | 328 | 42 | 1 | 5 | 332 | 38 | 364 | 0.0 | 596 |
| MS.gene39565.t1 | MTR_2g015720 | 75.926 | 324 | 76 | 2 | 9 | 332 | 39 | 360 | 0.0 | 519 |
| MS.gene39565.t1 | MTR_2g091175 | 60.185 | 324 | 125 | 3 | 9 | 331 | 47 | 367 | 1.60e-146 | 417 |
| MS.gene39565.t1 | MTR_4g079700 | 58.385 | 322 | 132 | 2 | 9 | 330 | 44 | 363 | 2.35e-138 | 397 |
| MS.gene39565.t1 | MTR_3g049330 | 55.556 | 324 | 141 | 3 | 10 | 331 | 29 | 351 | 1.00e-132 | 382 |
| MS.gene39565.t1 | MTR_2g073510 | 55.140 | 321 | 140 | 4 | 9 | 326 | 30 | 349 | 1.30e-127 | 369 |
| MS.gene39565.t1 | MTR_3g021060 | 51.703 | 323 | 153 | 3 | 9 | 330 | 43 | 363 | 7.11e-124 | 360 |
| MS.gene39565.t1 | MTR_3g021090 | 51.703 | 323 | 153 | 3 | 5 | 326 | 24 | 344 | 8.40e-124 | 362 |
| MS.gene39565.t1 | MTR_3g035830 | 51.402 | 321 | 153 | 3 | 11 | 330 | 30 | 348 | 1.44e-123 | 358 |
| MS.gene39565.t1 | MTR_5g034810 | 52.615 | 325 | 149 | 4 | 9 | 331 | 32 | 353 | 1.38e-121 | 353 |
| MS.gene39565.t1 | MTR_3g464570 | 49.133 | 346 | 159 | 5 | 2 | 331 | 33 | 377 | 6.31e-118 | 345 |
| MS.gene39565.t1 | MTR_5g071350 | 48.603 | 358 | 155 | 6 | 2 | 331 | 44 | 400 | 1.19e-116 | 343 |
| MS.gene39565.t1 | MTR_2g073500 | 47.256 | 328 | 155 | 6 | 12 | 331 | 29 | 346 | 2.40e-107 | 317 |
| MS.gene39565.t1 | MTR_1g111010 | 46.177 | 327 | 159 | 8 | 9 | 331 | 29 | 342 | 9.22e-99 | 295 |
| MS.gene39565.t1 | MTR_0136s0010 | 39.067 | 343 | 186 | 6 | 12 | 332 | 170 | 511 | 1.12e-90 | 280 |
| MS.gene39565.t1 | MTR_1g050448 | 40.361 | 332 | 182 | 4 | 9 | 330 | 50 | 375 | 1.18e-89 | 273 |
| MS.gene39565.t1 | MTR_7g093450 | 40.233 | 343 | 182 | 5 | 12 | 332 | 248 | 589 | 1.69e-88 | 277 |
| MS.gene39565.t1 | MTR_3g464570 | 49.815 | 271 | 119 | 5 | 77 | 331 | 4 | 273 | 5.19e-87 | 263 |
| MS.gene39565.t1 | MTR_4g121560 | 40.057 | 352 | 182 | 9 | 6 | 332 | 108 | 455 | 2.00e-85 | 265 |
| MS.gene39565.t1 | MTR_4g126950 | 37.537 | 341 | 192 | 5 | 12 | 332 | 109 | 448 | 1.32e-83 | 260 |
| MS.gene39565.t1 | MTR_1g112210 | 36.826 | 334 | 186 | 6 | 12 | 330 | 59 | 382 | 8.37e-83 | 256 |
| MS.gene39565.t1 | MTR_1g112210 | 36.826 | 334 | 173 | 7 | 12 | 330 | 59 | 369 | 2.65e-80 | 249 |
| MS.gene39565.t1 | MTR_5g059400 | 36.812 | 345 | 194 | 6 | 10 | 331 | 173 | 516 | 1.03e-79 | 252 |
| MS.gene39565.t1 | MTR_1g116130 | 36.812 | 345 | 194 | 6 | 10 | 331 | 173 | 516 | 1.03e-79 | 252 |
| MS.gene39565.t1 | MTR_5g033800 | 36.364 | 341 | 195 | 5 | 12 | 331 | 145 | 484 | 1.40e-79 | 251 |
| MS.gene39565.t1 | MTR_8g069790 | 36.950 | 341 | 193 | 7 | 12 | 331 | 178 | 517 | 9.31e-78 | 247 |
| MS.gene39565.t1 | MTR_4g016940 | 36.550 | 342 | 194 | 7 | 12 | 330 | 86 | 427 | 5.58e-76 | 239 |
| MS.gene39565.t1 | MTR_3g070900 | 37.069 | 348 | 190 | 8 | 11 | 331 | 105 | 450 | 9.63e-76 | 240 |
| MS.gene39565.t1 | MTR_5g082880 | 37.394 | 353 | 185 | 11 | 11 | 331 | 164 | 512 | 2.90e-72 | 233 |
| MS.gene39565.t1 | MTR_7g109550 | 37.838 | 333 | 183 | 8 | 12 | 326 | 137 | 463 | 5.16e-72 | 231 |
| MS.gene39565.t1 | MTR_4g014440 | 34.561 | 353 | 204 | 8 | 6 | 331 | 56 | 408 | 1.00e-69 | 223 |
| MS.gene39565.t1 | MTR_8g463790 | 35.860 | 343 | 194 | 8 | 12 | 331 | 71 | 410 | 1.00e-69 | 223 |
| MS.gene39565.t1 | MTR_3g071650 | 34.402 | 343 | 202 | 8 | 12 | 331 | 89 | 431 | 5.00e-69 | 222 |
| MS.gene39565.t1 | MTR_7g070060 | 35.530 | 349 | 198 | 9 | 9 | 330 | 61 | 409 | 2.22e-67 | 217 |
| MS.gene39565.t1 | MTR_3g090120 | 37.714 | 350 | 190 | 9 | 4 | 331 | 117 | 460 | 1.17e-66 | 217 |
| MS.gene39565.t1 | MTR_7g068920 | 35.362 | 345 | 200 | 7 | 9 | 330 | 77 | 421 | 1.64e-66 | 215 |
| MS.gene39565.t1 | MTR_7g094750 | 35.028 | 354 | 197 | 9 | 6 | 331 | 85 | 433 | 2.55e-66 | 215 |
| MS.gene39565.t1 | MTR_1g058380 | 34.402 | 343 | 200 | 8 | 12 | 331 | 55 | 395 | 1.70e-65 | 212 |
| MS.gene39565.t1 | MTR_2g022560 | 34.473 | 351 | 200 | 9 | 7 | 331 | 92 | 438 | 1.89e-65 | 213 |
| MS.gene39565.t1 | MTR_5g083260 | 33.048 | 351 | 212 | 8 | 4 | 331 | 75 | 425 | 1.66e-64 | 210 |
| MS.gene39565.t1 | MTR_4g014430 | 34.203 | 345 | 201 | 9 | 5 | 326 | 101 | 442 | 1.13e-63 | 208 |
| MS.gene39565.t1 | MTR_8g093530 | 34.030 | 335 | 199 | 7 | 12 | 331 | 90 | 417 | 1.34e-62 | 205 |
| MS.gene39565.t1 | MTR_5g033800 | 35.470 | 234 | 140 | 3 | 12 | 234 | 145 | 378 | 3.26e-53 | 179 |
| MS.gene39565.t1 | MTR_7g070060 | 32.353 | 306 | 180 | 9 | 52 | 330 | 2 | 307 | 7.50e-46 | 158 |
| MS.gene39565.t1 | MTR_7g094750 | 33.061 | 245 | 145 | 4 | 6 | 234 | 85 | 326 | 6.89e-45 | 156 |
| MS.gene39565.t1 | MTR_5g069320 | 33.548 | 310 | 136 | 8 | 39 | 323 | 122 | 386 | 1.78e-44 | 156 |
| MS.gene39565.t1 | MTR_7g070060 | 33.755 | 237 | 148 | 4 | 9 | 236 | 61 | 297 | 2.54e-43 | 152 |
| MS.gene39565.t1 | MTR_5g035090 | 30.435 | 345 | 206 | 11 | 9 | 323 | 80 | 420 | 1.77e-39 | 144 |
| MS.gene39565.t1 | MTR_5g035150 | 30.612 | 343 | 206 | 9 | 11 | 323 | 84 | 424 | 1.75e-36 | 136 |
| MS.gene39565.t1 | MTR_6g016875 | 30.748 | 361 | 204 | 12 | 2 | 326 | 54 | 404 | 2.62e-35 | 133 |
| MS.gene39565.t1 | MTR_4g092830 | 28.775 | 351 | 214 | 13 | 12 | 331 | 48 | 393 | 8.73e-35 | 132 |
| MS.gene39565.t1 | MTR_6g016880 | 28.775 | 351 | 215 | 8 | 11 | 332 | 77 | 421 | 4.92e-34 | 129 |
| MS.gene39565.t1 | MTR_8g093870 | 30.372 | 349 | 212 | 13 | 8 | 330 | 129 | 472 | 6.01e-34 | 130 |
| MS.gene39565.t1 | MTR_3g021150 | 55.660 | 106 | 46 | 1 | 197 | 301 | 1 | 106 | 6.97e-34 | 121 |
| MS.gene39565.t1 | MTR_6g061710 | 28.689 | 366 | 188 | 13 | 12 | 326 | 167 | 510 | 1.84e-33 | 129 |
| MS.gene39565.t1 | MTR_8g027900 | 28.065 | 367 | 208 | 13 | 6 | 331 | 205 | 556 | 1.14e-32 | 127 |
| MS.gene39565.t1 | MTR_4g125060 | 30.471 | 361 | 212 | 16 | 3 | 330 | 117 | 471 | 1.38e-32 | 126 |
| MS.gene39565.t1 | MTR_4g125060 | 30.471 | 361 | 212 | 16 | 3 | 330 | 156 | 510 | 2.36e-32 | 126 |
| MS.gene39565.t1 | MTR_4g125060 | 30.471 | 361 | 212 | 16 | 3 | 330 | 185 | 539 | 2.97e-32 | 126 |
| MS.gene39565.t1 | MTR_5g035080 | 28.852 | 357 | 197 | 16 | 12 | 326 | 75 | 416 | 4.55e-32 | 124 |
| MS.gene39565.t1 | MTR_5g035070 | 27.326 | 344 | 220 | 9 | 12 | 326 | 87 | 429 | 1.48e-31 | 123 |
| MS.gene39565.t1 | MTR_1g076690 | 26.966 | 356 | 213 | 11 | 9 | 326 | 220 | 566 | 4.35e-31 | 123 |
| MS.gene39565.t1 | MTR_7g019120 | 27.042 | 355 | 226 | 9 | 6 | 332 | 73 | 422 | 1.21e-30 | 120 |
| MS.gene39565.t1 | MTR_3g109840 | 27.762 | 353 | 217 | 13 | 3 | 323 | 62 | 408 | 2.13e-30 | 119 |
| MS.gene39565.t1 | MTR_8g099300 | 26.629 | 353 | 226 | 8 | 9 | 331 | 71 | 420 | 4.98e-30 | 118 |
| MS.gene39565.t1 | MTR_2g016060 | 27.901 | 362 | 217 | 14 | 1 | 326 | 43 | 396 | 8.66e-30 | 117 |
| MS.gene39565.t1 | MTR_6g007777 | 28.809 | 361 | 212 | 15 | 3 | 330 | 109 | 457 | 1.93e-29 | 117 |
| MS.gene39565.t1 | MTR_7g033230 | 27.378 | 347 | 215 | 11 | 12 | 326 | 264 | 605 | 9.89e-29 | 116 |
| MS.gene39565.t1 | MTR_7g033230 | 27.378 | 347 | 215 | 11 | 12 | 326 | 334 | 675 | 2.17e-28 | 115 |
| MS.gene39565.t1 | MTR_8g104970 | 27.479 | 353 | 215 | 13 | 8 | 326 | 116 | 461 | 2.99e-27 | 111 |
| MS.gene39565.t1 | MTR_6g016240 | 27.273 | 352 | 217 | 12 | 8 | 326 | 67 | 412 | 1.20e-24 | 103 |
| MS.gene39565.t1 | MTR_7g019140 | 39.130 | 92 | 56 | 0 | 9 | 100 | 76 | 167 | 1.49e-18 | 82.0 |
| MS.gene39565.t1 | MTR_5g035120 | 40.659 | 91 | 54 | 0 | 12 | 102 | 75 | 165 | 1.25e-17 | 79.7 |
| MS.gene39565.t1 | MTR_3g021080 | 35.294 | 102 | 45 | 2 | 231 | 331 | 99 | 180 | 1.05e-14 | 71.6 |
| MS.gene39565.t1 | MTR_2g022580 | 29.688 | 128 | 71 | 4 | 72 | 183 | 2 | 126 | 6.44e-13 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39565.t1 | AT1G29050 | 65.165 | 333 | 113 | 3 | 1 | 332 | 50 | 380 | 3.37e-170 | 478 |
| MS.gene39565.t1 | AT2G34070 | 65.269 | 334 | 111 | 5 | 1 | 332 | 55 | 385 | 1.41e-164 | 464 |
| MS.gene39565.t1 | AT2G31110 | 58.307 | 319 | 132 | 1 | 12 | 330 | 45 | 362 | 2.35e-146 | 417 |
| MS.gene39565.t1 | AT2G42570 | 58.104 | 327 | 136 | 1 | 5 | 331 | 40 | 365 | 6.14e-145 | 414 |
| MS.gene39565.t1 | AT3G14850 | 53.086 | 324 | 146 | 4 | 7 | 326 | 29 | 350 | 5.21e-124 | 360 |
| MS.gene39565.t1 | AT2G34070 | 66.798 | 253 | 80 | 4 | 82 | 332 | 1 | 251 | 2.69e-121 | 349 |
| MS.gene39565.t1 | AT2G30900 | 52.000 | 325 | 150 | 5 | 12 | 331 | 43 | 366 | 1.61e-120 | 352 |
| MS.gene39565.t1 | AT1G78710 | 48.012 | 327 | 166 | 3 | 7 | 331 | 33 | 357 | 2.40e-120 | 351 |
| MS.gene39565.t1 | AT5G58600 | 49.853 | 339 | 152 | 6 | 10 | 331 | 64 | 401 | 2.35e-113 | 335 |
| MS.gene39565.t1 | AT2G30010 | 46.218 | 357 | 165 | 6 | 2 | 331 | 41 | 397 | 9.66e-106 | 315 |
| MS.gene39565.t1 | AT2G30010 | 46.218 | 357 | 165 | 6 | 2 | 331 | 84 | 440 | 1.69e-105 | 316 |
| MS.gene39565.t1 | AT2G31110 | 58.716 | 218 | 89 | 1 | 12 | 229 | 45 | 261 | 1.36e-98 | 292 |
| MS.gene39565.t1 | AT3G14850 | 54.217 | 249 | 108 | 4 | 82 | 326 | 1 | 247 | 2.90e-92 | 275 |
| MS.gene39565.t1 | AT2G31110 | 59.135 | 208 | 84 | 1 | 123 | 330 | 8 | 214 | 3.63e-91 | 271 |
| MS.gene39565.t1 | AT5G06700 | 40.407 | 344 | 182 | 6 | 11 | 332 | 254 | 596 | 6.70e-90 | 281 |
| MS.gene39565.t1 | AT1G78710 | 40.367 | 327 | 138 | 4 | 7 | 331 | 26 | 297 | 7.97e-87 | 263 |
| MS.gene39565.t1 | AT3G12060 | 40.116 | 344 | 183 | 6 | 11 | 332 | 195 | 537 | 4.96e-86 | 270 |
| MS.gene39565.t1 | AT3G54260 | 38.806 | 335 | 180 | 6 | 12 | 331 | 51 | 375 | 9.70e-86 | 263 |
| MS.gene39565.t1 | AT2G30900 | 52.863 | 227 | 104 | 3 | 12 | 236 | 43 | 268 | 1.13e-83 | 254 |
| MS.gene39565.t1 | AT5G20590 | 37.143 | 350 | 198 | 6 | 4 | 332 | 133 | 481 | 1.72e-82 | 258 |
| MS.gene39565.t1 | AT5G58600 | 51.528 | 229 | 108 | 3 | 10 | 236 | 64 | 291 | 5.39e-81 | 248 |
| MS.gene39565.t1 | AT5G01360 | 37.391 | 345 | 192 | 7 | 10 | 330 | 34 | 378 | 2.67e-80 | 249 |
| MS.gene39565.t1 | AT5G49340 | 37.283 | 346 | 192 | 7 | 11 | 332 | 99 | 443 | 6.11e-80 | 251 |
| MS.gene39565.t1 | AT5G01360 | 37.391 | 345 | 192 | 7 | 10 | 330 | 90 | 434 | 1.00e-79 | 249 |
| MS.gene39565.t1 | AT1G60790 | 36.416 | 346 | 194 | 7 | 11 | 331 | 189 | 533 | 2.81e-75 | 241 |
| MS.gene39565.t1 | AT3G62390 | 37.719 | 342 | 194 | 8 | 7 | 331 | 133 | 472 | 2.57e-74 | 237 |
| MS.gene39565.t1 | AT1G73140 | 35.632 | 348 | 198 | 8 | 7 | 331 | 62 | 406 | 6.19e-71 | 226 |
| MS.gene39565.t1 | AT3G55990 | 36.311 | 347 | 192 | 9 | 12 | 331 | 140 | 484 | 1.11e-70 | 228 |
| MS.gene39565.t1 | AT5G19160 | 36.111 | 360 | 187 | 12 | 7 | 331 | 94 | 445 | 1.23e-70 | 227 |
| MS.gene39565.t1 | AT2G40150 | 35.211 | 355 | 195 | 9 | 10 | 331 | 69 | 421 | 2.00e-70 | 225 |
| MS.gene39565.t1 | AT3G11030 | 35.127 | 353 | 203 | 9 | 4 | 331 | 98 | 449 | 3.26e-69 | 223 |
| MS.gene39565.t1 | AT1G48880 | 35.629 | 334 | 183 | 7 | 12 | 326 | 115 | 435 | 1.19e-68 | 221 |
| MS.gene39565.t1 | AT3G06080 | 34.571 | 350 | 203 | 7 | 7 | 331 | 98 | 446 | 9.20e-68 | 219 |
| MS.gene39565.t1 | AT2G40160 | 34.670 | 349 | 198 | 9 | 12 | 331 | 77 | 424 | 1.11e-67 | 218 |
| MS.gene39565.t1 | AT5G06230 | 33.524 | 349 | 205 | 7 | 9 | 331 | 18 | 365 | 1.21e-67 | 216 |
| MS.gene39565.t1 | AT2G40160 | 34.670 | 349 | 198 | 9 | 12 | 331 | 77 | 424 | 1.68e-67 | 218 |
| MS.gene39565.t1 | AT5G06230 | 33.524 | 349 | 205 | 7 | 9 | 331 | 59 | 406 | 3.36e-67 | 216 |
| MS.gene39565.t1 | AT5G01620 | 33.524 | 349 | 206 | 9 | 2 | 326 | 99 | 445 | 6.24e-66 | 214 |
| MS.gene39565.t1 | AT5G01620 | 33.524 | 349 | 206 | 9 | 2 | 326 | 99 | 445 | 6.24e-66 | 214 |
| MS.gene39565.t1 | AT2G40320 | 35.411 | 353 | 201 | 10 | 4 | 331 | 73 | 423 | 8.23e-66 | 213 |
| MS.gene39565.t1 | AT5G01620 | 33.524 | 349 | 206 | 9 | 2 | 326 | 107 | 453 | 1.03e-65 | 214 |
| MS.gene39565.t1 | AT2G38320 | 33.141 | 347 | 205 | 8 | 12 | 331 | 59 | 405 | 1.58e-64 | 209 |
| MS.gene39565.t1 | AT3G11570 | 33.951 | 324 | 193 | 6 | 28 | 331 | 98 | 420 | 2.41e-63 | 207 |
| MS.gene39565.t1 | AT2G38320 | 31.348 | 319 | 193 | 7 | 39 | 331 | 4 | 322 | 4.85e-54 | 180 |
| MS.gene39565.t1 | AT5G20590 | 35.656 | 244 | 144 | 4 | 4 | 234 | 133 | 376 | 1.17e-52 | 178 |
| MS.gene39565.t1 | AT5G19160 | 35.656 | 244 | 138 | 6 | 7 | 234 | 94 | 334 | 3.97e-51 | 173 |
| MS.gene39565.t1 | AT3G62390 | 35.565 | 239 | 143 | 5 | 7 | 234 | 133 | 371 | 4.92e-48 | 167 |
| MS.gene39565.t1 | AT2G40160 | 33.761 | 234 | 144 | 4 | 12 | 234 | 77 | 310 | 2.50e-46 | 159 |
| MS.gene39565.t1 | AT3G06080 | 34.025 | 241 | 146 | 4 | 7 | 234 | 98 | 338 | 1.36e-44 | 156 |
| MS.gene39565.t1 | AT5G06230 | 31.174 | 247 | 151 | 4 | 9 | 236 | 59 | 305 | 4.25e-41 | 145 |
| MS.gene39565.t1 | AT5G64470 | 31.389 | 360 | 195 | 16 | 12 | 332 | 55 | 401 | 3.48e-38 | 140 |
| MS.gene39565.t1 | AT5G64470 | 30.312 | 353 | 202 | 14 | 12 | 332 | 55 | 395 | 1.51e-37 | 139 |
| MS.gene39565.t1 | AT4G25360 | 29.888 | 358 | 208 | 12 | 6 | 326 | 169 | 520 | 1.27e-36 | 138 |
| MS.gene39565.t1 | AT4G25360 | 29.888 | 358 | 208 | 12 | 6 | 326 | 169 | 520 | 1.27e-36 | 138 |
| MS.gene39565.t1 | AT5G64020 | 29.609 | 358 | 207 | 13 | 12 | 330 | 57 | 408 | 6.27e-36 | 134 |
| MS.gene39565.t1 | AT1G70230 | 29.204 | 339 | 206 | 13 | 12 | 326 | 79 | 407 | 1.06e-35 | 134 |
| MS.gene39565.t1 | AT1G01430 | 27.548 | 363 | 223 | 10 | 4 | 331 | 91 | 448 | 8.81e-35 | 132 |
| MS.gene39565.t1 | AT5G51640 | 29.944 | 354 | 202 | 12 | 12 | 326 | 138 | 484 | 1.21e-33 | 129 |
| MS.gene39565.t1 | AT2G37720 | 29.096 | 354 | 202 | 13 | 12 | 330 | 143 | 482 | 3.30e-33 | 128 |
| MS.gene39565.t1 | AT5G20680 | 28.406 | 345 | 216 | 14 | 12 | 330 | 118 | 457 | 1.54e-31 | 123 |
| MS.gene39565.t1 | AT5G20680 | 28.406 | 345 | 216 | 14 | 12 | 330 | 212 | 551 | 3.57e-31 | 123 |
| MS.gene39565.t1 | AT5G20680 | 28.406 | 345 | 216 | 14 | 12 | 330 | 212 | 551 | 3.57e-31 | 123 |
| MS.gene39565.t1 | AT5G20680 | 28.406 | 345 | 216 | 14 | 12 | 330 | 212 | 551 | 3.57e-31 | 123 |
| MS.gene39565.t1 | AT5G20680 | 28.406 | 345 | 216 | 14 | 12 | 330 | 212 | 551 | 3.57e-31 | 123 |
| MS.gene39565.t1 | AT5G20680 | 28.406 | 345 | 216 | 14 | 12 | 330 | 194 | 533 | 3.74e-31 | 123 |
| MS.gene39565.t1 | AT4G01080 | 28.324 | 346 | 213 | 11 | 9 | 326 | 88 | 426 | 5.72e-30 | 119 |
| MS.gene39565.t1 | AT3G28150 | 28.611 | 360 | 197 | 11 | 12 | 330 | 70 | 410 | 5.81e-30 | 118 |
| MS.gene39565.t1 | AT5G15890 | 27.515 | 338 | 216 | 8 | 12 | 326 | 187 | 518 | 1.87e-29 | 118 |
| MS.gene39565.t1 | AT5G15900 | 27.714 | 350 | 219 | 9 | 10 | 330 | 65 | 409 | 6.46e-29 | 115 |
| MS.gene39565.t1 | AT5G15900 | 27.714 | 350 | 219 | 9 | 10 | 330 | 84 | 428 | 6.89e-29 | 115 |
| MS.gene39565.t1 | AT2G14530 | 28.371 | 356 | 213 | 12 | 9 | 330 | 59 | 406 | 3.92e-28 | 113 |
| MS.gene39565.t1 | AT3G02440 | 26.744 | 344 | 217 | 10 | 12 | 326 | 135 | 472 | 1.96e-27 | 112 |
| MS.gene39565.t1 | AT3G02440 | 26.744 | 344 | 217 | 10 | 12 | 326 | 127 | 464 | 2.09e-27 | 112 |
| MS.gene39565.t1 | AT4G11090 | 27.577 | 359 | 210 | 12 | 12 | 331 | 79 | 426 | 2.98e-27 | 111 |
| MS.gene39565.t1 | AT4G23790 | 26.136 | 352 | 226 | 9 | 12 | 331 | 79 | 428 | 1.55e-25 | 106 |
| MS.gene39565.t1 | AT5G64470 | 28.516 | 256 | 148 | 9 | 12 | 242 | 55 | 300 | 1.48e-21 | 93.6 |
| MS.gene39565.t1 | AT5G64470 | 28.516 | 256 | 148 | 9 | 12 | 242 | 55 | 300 | 1.77e-21 | 93.6 |
Find 84 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATAATTGTAATTTGTTCTT+TGG | 0.220399 | 4.2:-23477334 | MS.gene39565:CDS |
| ACTATACCGTACACCATATT+TGG | 0.252473 | 4.2:-23474892 | MS.gene39565:CDS |
| ATTATTATATCCACCAAATA+TGG | 0.271330 | 4.2:+23474879 | None:intergenic |
| TATTTAAGATACTGATTATC+AGG | 0.276183 | 4.2:+23477220 | None:intergenic |
| ACATGATTAGAGCTGCATTT+AGG | 0.303593 | 4.2:+23473922 | None:intergenic |
| ATTGACCACTTGGGCTGGTT+GGG | 0.323556 | 4.2:-23474420 | MS.gene39565:CDS |
| AGGAGTATGTTCCAAGTATC+AGG | 0.327240 | 4.2:+23473942 | None:intergenic |
| TTGTTCACTACATCATTTGC+AGG | 0.336870 | 4.2:+23474104 | None:intergenic |
| AAAACTAAACTATTCTTTCA+AGG | 0.366481 | 4.2:-23474374 | MS.gene39565:CDS |
| CGGGGAAGTTGAACCATTAC+CGG | 0.374830 | 4.2:-23474153 | MS.gene39565:CDS |
| AGATTGCATGCACAGGACTA+TGG | 0.376697 | 4.2:-23474927 | MS.gene39565:intron |
| GAAAAGCTTGTAGTGACATT+AGG | 0.381141 | 4.2:+23476797 | None:intergenic |
| ATCAGTATCTTAAATACTCT+TGG | 0.387106 | 4.2:-23477213 | MS.gene39565:CDS |
| AATGTCTACTGTCTTCTTCC+AGG | 0.394880 | 4.2:-23476762 | MS.gene39565:intron |
| GGATATGTGGTTCCCGGTAA+TGG | 0.403713 | 4.2:+23474140 | None:intergenic |
| CTGGGTAAAGCACATGAATC+AGG | 0.414998 | 4.2:+23477187 | None:intergenic |
| AGTGAGGGACATGGACCGTT+TGG | 0.425551 | 4.2:-23474459 | MS.gene39565:CDS |
| TCCCCGCTACATGTCTTCTT+CGG | 0.430209 | 4.2:+23474170 | None:intergenic |
| GATTGACCACTTGGGCTGGT+TGG | 0.439990 | 4.2:-23474421 | MS.gene39565:CDS |
| GGGGCTGGATATGTGGTTCC+CGG | 0.443752 | 4.2:+23474134 | None:intergenic |
| GATAAGAAGATAATGTTTGT+AGG | 0.445963 | 4.2:-23476878 | MS.gene39565:CDS |
| TTGAATCCAGAGGGCAGGAT+TGG | 0.450495 | 4.2:-23474199 | MS.gene39565:intron |
| TTACTTACTTGTTATGAGTA+GGG | 0.455719 | 4.2:+23474345 | None:intergenic |
| GTAATTTGTTCTTTGGAAGC+TGG | 0.456024 | 4.2:-23477327 | MS.gene39565:CDS |
| TTTATAAGGGATTGACCACT+TGG | 0.465985 | 4.2:-23474430 | MS.gene39565:CDS |
| TCTTCAACTCCTGGCATTGG+TGG | 0.467165 | 4.2:-23474779 | MS.gene39565:CDS |
| ACATCATTTGCAGGAGGTAG+AGG | 0.472593 | 4.2:+23474113 | None:intergenic |
| TGTAGTCATTGGTGCCTACC+AGG | 0.474740 | 4.2:-23473969 | MS.gene39565:CDS |
| TTGTGCCCTTGCTGGGTGCA+TGG | 0.478358 | 4.2:+23477363 | None:intergenic |
| TACCAGGACTACCTGATACT+TGG | 0.478567 | 4.2:-23473953 | MS.gene39565:CDS |
| TAATTTGTTCTTTGGAAGCT+GGG | 0.484946 | 4.2:-23477326 | MS.gene39565:CDS |
| TGGTGTACGGTATAGTTGTA+TGG | 0.491607 | 4.2:+23474899 | None:intergenic |
| TTTGCAGGAGGTAGAGGGGC+TGG | 0.492978 | 4.2:+23474119 | None:intergenic |
| GGATCCTTAGTATAGATAGA+AGG | 0.493596 | 4.2:+23474005 | None:intergenic |
| AAGGGATTGACCACTTGGGC+TGG | 0.495484 | 4.2:-23474425 | MS.gene39565:CDS |
| ATAATAATTCAAGAAGATGT+TGG | 0.497836 | 4.2:-23474864 | MS.gene39565:CDS |
| TGATCTTCAACTCCTGGCAT+TGG | 0.498503 | 4.2:-23474782 | MS.gene39565:CDS |
| GTGGTGTAGGTTCAGTGGAG+AGG | 0.499875 | 4.2:-23476921 | MS.gene39565:intron |
| GTTAAAGAACATGAAGAAGC+AGG | 0.504244 | 4.2:-23474078 | MS.gene39565:CDS |
| ATCTATACTAAGGATCCAAC+TGG | 0.504484 | 4.2:-23473999 | MS.gene39565:CDS |
| CTGGCATTGATTGTAGTCAT+TGG | 0.505796 | 4.2:-23473980 | MS.gene39565:CDS |
| AGGTAGAGGGGCTGGATATG+TGG | 0.507780 | 4.2:+23474127 | None:intergenic |
| GTCTTGTATGATTCATGCGT+CGG | 0.512224 | 4.2:-23476822 | MS.gene39565:CDS |
| GTTACTTACTTGTTATGAGT+AGG | 0.517658 | 4.2:+23474344 | None:intergenic |
| TCTCCTTGAATCCAGAGGGC+AGG | 0.517922 | 4.2:-23474204 | MS.gene39565:intron |
| ACATCCTTCTATCTATACTA+AGG | 0.519367 | 4.2:-23474009 | MS.gene39565:CDS |
| TACTTACTTGTTATGAGTAG+GGG | 0.532035 | 4.2:+23474346 | None:intergenic |
| CATCATTTGCAGGAGGTAGA+GGG | 0.532490 | 4.2:+23474114 | None:intergenic |
| TTCCAAGTATCAGGTAGTCC+TGG | 0.535659 | 4.2:+23473951 | None:intergenic |
| AACCGAAGAAGACATGTAGC+GGG | 0.541404 | 4.2:-23474172 | MS.gene39565:CDS |
| ACATGTTGATCTTCAACTCC+TGG | 0.546418 | 4.2:-23474788 | MS.gene39565:CDS |
| AGTGTGGATCCACCAATGCC+AGG | 0.547954 | 4.2:+23474770 | None:intergenic |
| ATCAAACTGAGCTTCAACGA+AGG | 0.553255 | 4.2:+23477261 | None:intergenic |
| TGACTACAATCAATGCCAGT+TGG | 0.558982 | 4.2:+23473984 | None:intergenic |
| ATACCGTACACCATATTTGG+TGG | 0.560969 | 4.2:-23474889 | MS.gene39565:CDS |
| CCTTATAAAATGCATCCAAA+CGG | 0.562648 | 4.2:+23474444 | None:intergenic |
| CTGATTCATGTGCTTTACCC+AGG | 0.569924 | 4.2:-23477186 | MS.gene39565:intron |
| TGGCATTGGTGGATCCACAC+TGG | 0.570664 | 4.2:-23474768 | MS.gene39565:CDS |
| ACGCTGGACTCTATAAAAGC+TGG | 0.571735 | 4.2:-23474831 | MS.gene39565:CDS |
| ATTCATTGAGTCTAAACATG+TGG | 0.578501 | 4.2:-23476853 | MS.gene39565:CDS |
| TATCCACCAAATATGGTGTA+CGG | 0.590876 | 4.2:+23474886 | None:intergenic |
| CTATAAAAGCTGGTAAAGCA+TGG | 0.592608 | 4.2:-23474821 | MS.gene39565:CDS |
| GGGGAAGTTGAACCATTACC+GGG | 0.597940 | 4.2:-23474152 | MS.gene39565:CDS |
| TTATATCCATGCACCCAGCA+AGG | 0.602227 | 4.2:-23477369 | None:intergenic |
| TATATCCATGCACCCAGCAA+GGG | 0.606783 | 4.2:-23477368 | None:intergenic |
| TTCATTGAGTCTAAACATGT+GGG | 0.609808 | 4.2:-23476852 | MS.gene39565:CDS |
| TCAAACTGAGCTTCAACGAA+GGG | 0.618613 | 4.2:+23477262 | None:intergenic |
| ATCAACCCAACCAGCCCAAG+TGG | 0.622283 | 4.2:+23474415 | None:intergenic |
| ATCATTTGCAGGAGGTAGAG+GGG | 0.623105 | 4.2:+23474115 | None:intergenic |
| GAGATGGTTCTAATCTAGTG+AGG | 0.627215 | 4.2:-23474475 | MS.gene39565:CDS |
| AAGTATCAGGTAGTCCTGGT+AGG | 0.628734 | 4.2:+23473955 | None:intergenic |
| AGATGGTTCTAATCTAGTGA+GGG | 0.631565 | 4.2:-23474474 | MS.gene39565:CDS |
| TTCACTACATCATTTGCAGG+AGG | 0.631894 | 4.2:+23474107 | None:intergenic |
| TGTTGGTAGAGTGCTTACGC+TGG | 0.633724 | 4.2:-23474847 | MS.gene39565:CDS |
| TTATAAGGGATTGACCACTT+GGG | 0.640369 | 4.2:-23474429 | MS.gene39565:CDS |
| GAACCGAAGAAGACATGTAG+CGG | 0.645973 | 4.2:-23474173 | MS.gene39565:CDS |
| CAGCTTGAAGAATCATAGAG+AGG | 0.652645 | 4.2:+23477286 | None:intergenic |
| TTCTAATCTAGTGAGGGACA+TGG | 0.659068 | 4.2:-23474468 | MS.gene39565:CDS |
| TGGAAGAAGACAGTAGACAT+TGG | 0.660692 | 4.2:+23476764 | None:intergenic |
| TGGTAAAGCATGGTTAGACA+TGG | 0.665553 | 4.2:-23474811 | MS.gene39565:CDS |
| ATCCACACTGGAGATTTACG+AGG | 0.690791 | 4.2:-23474756 | MS.gene39565:CDS |
| ACCGAAGAAGACATGTAGCG+GGG | 0.713042 | 4.2:-23474171 | MS.gene39565:CDS |
| TCCACACTGGAGATTTACGA+GGG | 0.713392 | 4.2:-23474755 | MS.gene39565:intron |
| ACCCTCGTAAATCTCCAGTG+TGG | 0.727033 | 4.2:+23474754 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAATCAAATATGA+AGG | + | chr4.2:23476089-23476108 | None:intergenic | 10.0% |
| !! | AATATAATATTATATAAGTG+AGG | - | chr4.2:23475026-23475045 | MS.gene39565:intron | 10.0% |
| !! | AAATTTGTATTGTCATTATA+GGG | - | chr4.2:23475893-23475912 | MS.gene39565:intron | 15.0% |
| !! | AATAAAGTAAAGATTCAATT+TGG | + | chr4.2:23476153-23476172 | None:intergenic | 15.0% |
| !! | ATAAAGTAAAGATTCAATTT+GGG | + | chr4.2:23476152-23476171 | None:intergenic | 15.0% |
| !! | ATCATTGATATTATCATATT+GGG | + | chr4.2:23476231-23476250 | None:intergenic | 15.0% |
| !! | CATTAATTCATTATAATAGA+TGG | - | chr4.2:23476027-23476046 | MS.gene39565:intron | 15.0% |
| !! | TAAATTTGTATTGTCATTAT+AGG | - | chr4.2:23475892-23475911 | MS.gene39565:intron | 15.0% |
| !! | TATATGTGACAATTAATATT+TGG | - | chr4.2:23474269-23474288 | MS.gene39565:intron | 15.0% |
| !! | TATCATTGATATTATCATAT+TGG | + | chr4.2:23476232-23476251 | None:intergenic | 15.0% |
| !! | TTATTAAATAAACATTTGGA+CGG | + | chr4.2:23475239-23475258 | None:intergenic | 15.0% |
| !!! | AACATCATTGATTTTTTTTA+AGG | + | chr4.2:23476263-23476282 | None:intergenic | 15.0% |
| !!! | AATAATTGTAATTTGTTCTT+TGG | - | chr4.2:23473947-23473966 | MS.gene39565:CDS | 15.0% |
| !!! | GACTTATTTTTTTTATAGTT+TGG | + | chr4.2:23475351-23475370 | None:intergenic | 15.0% |
| !! | AAAACTAAACTATTCTTTCA+AGG | - | chr4.2:23476907-23476926 | MS.gene39565:CDS | 20.0% |
| !! | AATTAACTCGTTGAATAAAA+TGG | - | chr4.2:23474900-23474919 | MS.gene39565:CDS | 20.0% |
| !! | AATTTGTATTGTCATTATAG+GGG | - | chr4.2:23475894-23475913 | MS.gene39565:intron | 20.0% |
| !! | AGATAAAAAAATATGTTGCA+AGG | + | chr4.2:23475973-23475992 | None:intergenic | 20.0% |
| !! | ATAATAATTCAAGAAGATGT+TGG | - | chr4.2:23476417-23476436 | MS.gene39565:intron | 20.0% |
| !! | ATTATTATATCCACCAAATA+TGG | + | chr4.2:23476405-23476424 | None:intergenic | 20.0% |
| !! | GATAAAAAAATATGTTGCAA+GGG | + | chr4.2:23475972-23475991 | None:intergenic | 20.0% |
| !! | TCATTGATATTATCATATTG+GGG | + | chr4.2:23476230-23476249 | None:intergenic | 20.0% |
| !! | TTCAAATATACATTCAATTG+TGG | + | chr4.2:23476590-23476609 | None:intergenic | 20.0% |
| !! | TTGAATGTATATTTGAATTG+AGG | - | chr4.2:23476593-23476612 | MS.gene39565:intron | 20.0% |
| !!! | AAGAATAGTTTAGTTTTAGT+AGG | + | chr4.2:23476904-23476923 | None:intergenic | 20.0% |
| !!! | AATATTTCTATGGAAAATGA+TGG | + | chr4.2:23474819-23474838 | None:intergenic | 20.0% |
| !!! | AGAATAGTTTAGTTTTAGTA+GGG | + | chr4.2:23476903-23476922 | None:intergenic | 20.0% |
| !!! | CTCTAATTAAAAGTATGTAT+TGG | + | chr4.2:23476984-23477003 | None:intergenic | 20.0% |
| !!! | GTAATGAGTAATTATTTTTG+TGG | - | chr4.2:23474341-23474360 | MS.gene39565:intron | 20.0% |
| !!! | TATTTAAGATACTGATTATC+AGG | + | chr4.2:23474064-23474083 | None:intergenic | 20.0% |
| ! | AATTTCGAGCTTAATATCTT+TGG | + | chr4.2:23474773-23474792 | None:intergenic | 25.0% |
| ! | AGAAATATTTGAATGAGACT+AGG | - | chr4.2:23474830-23474849 | MS.gene39565:CDS | 25.0% |
| ! | ATCAGTATCTTAAATACTCT+TGG | - | chr4.2:23474068-23474087 | MS.gene39565:CDS | 25.0% |
| ! | CACTAACACAGTTTAATTAT+GGG | + | chr4.2:23476324-23476343 | None:intergenic | 25.0% |
| ! | CAGTTTGATTGCAAAAAATA+TGG | - | chr4.2:23474034-23474053 | MS.gene39565:CDS | 25.0% |
| ! | CTATTTAAACAAAGTCTGAT+TGG | - | chr4.2:23475430-23475449 | MS.gene39565:intron | 25.0% |
| ! | GATAAAAATATCCATATTCG+TGG | - | chr4.2:23476186-23476205 | MS.gene39565:intron | 25.0% |
| ! | GATAAGAAGATAATGTTTGT+AGG | - | chr4.2:23474403-23474422 | MS.gene39565:CDS | 25.0% |
| ! | TATATGTGACATATCACAAA+GGG | + | chr4.2:23474159-23474178 | None:intergenic | 25.0% |
| ! | TCACTAACACAGTTTAATTA+TGG | + | chr4.2:23476325-23476344 | None:intergenic | 25.0% |
| ! | TTACATTCGTACTATACATT+AGG | + | chr4.2:23474325-23474344 | None:intergenic | 25.0% |
| ! | TTATATGTGACATATCACAA+AGG | + | chr4.2:23474160-23474179 | None:intergenic | 25.0% |
| ! | TTTATTTGTAAAGAGAGAGA+AGG | + | chr4.2:23475639-23475658 | None:intergenic | 25.0% |
| !! | AAAGTGATGAATGTGTTATT+TGG | - | chr4.2:23476755-23476774 | MS.gene39565:intron | 25.0% |
| !! | CAATCAGACTTTGTTTAAAT+AGG | + | chr4.2:23475432-23475451 | None:intergenic | 25.0% |
| !! | GTCTCATTCAAATATTTCTA+TGG | + | chr4.2:23474829-23474848 | None:intergenic | 25.0% |
| !! | TTTAGAGTTGTCTTTACATA+AGG | + | chr4.2:23475795-23475814 | None:intergenic | 25.0% |
| !!! | AGTAATTATTTTTGTGGTGT+AGG | - | chr4.2:23474347-23474366 | MS.gene39565:intron | 25.0% |
| !!! | ATAAACGTGTTTTGTTTCTA+TGG | + | chr4.2:23474240-23474259 | None:intergenic | 25.0% |
| !!! | CTTTACTTTATTTCTATCCA+TGG | - | chr4.2:23476161-23476180 | MS.gene39565:intron | 25.0% |
| !!! | TCATTTTGTTTGTTTCTTTG+CGG | - | chr4.2:23474615-23474634 | MS.gene39565:intron | 25.0% |
| !!! | TTACTTACTTGTTATGAGTA+GGG | + | chr4.2:23476939-23476958 | None:intergenic | 25.0% |
| AAACAAGAACAACTATTACC+TGG | + | chr4.2:23474540-23474559 | None:intergenic | 30.0% | |
| AATATCTAGATTTAGCGACA+AGG | + | chr4.2:23475119-23475138 | None:intergenic | 30.0% | |
| ACATCCTTCTATCTATACTA+AGG | - | chr4.2:23477272-23477291 | MS.gene39565:CDS | 30.0% | |
| ATACAAACTAACAGTATACC+TGG | + | chr4.2:23474116-23474135 | None:intergenic | 30.0% | |
| ATTCATTGAGTCTAAACATG+TGG | - | chr4.2:23474428-23474447 | MS.gene39565:CDS | 30.0% | |
| ATTTGAATTGAGGTGATTTG+AGG | - | chr4.2:23476603-23476622 | MS.gene39565:intron | 30.0% | |
| CCTGTTACATGTAAAATGAT+AGG | - | chr4.2:23474718-23474737 | MS.gene39565:intron | 30.0% | |
| CCTTATAAAATGCATCCAAA+CGG | + | chr4.2:23476840-23476859 | None:intergenic | 30.0% | |
| GATATTAAGCTCGAAATTGA+AGG | - | chr4.2:23474775-23474794 | MS.gene39565:CDS | 30.0% | |
| TAAACTGTGTTAGTGATACT+TGG | - | chr4.2:23476329-23476348 | MS.gene39565:intron | 30.0% | |
| TAACACAGTTTAATTATGGG+TGG | + | chr4.2:23476321-23476340 | None:intergenic | 30.0% | |
| TACAAACTAACAGTATACCT+GGG | + | chr4.2:23474115-23474134 | None:intergenic | 30.0% | |
| TAGTTGATCTACATAAAGTC+TGG | - | chr4.2:23474874-23474893 | MS.gene39565:CDS | 30.0% | |
| TATTTGAATGAGACTAGGTT+AGG | - | chr4.2:23474835-23474854 | MS.gene39565:CDS | 30.0% | |
| TCATGATTGGAGAAATTCTT+AGG | + | chr4.2:23475748-23475767 | None:intergenic | 30.0% | |
| TGATATTATCATATTGGGGA+TGG | + | chr4.2:23476226-23476245 | None:intergenic | 30.0% | |
| TGGTGTAAATGAGCATATAT+TGG | + | chr4.2:23476964-23476983 | None:intergenic | 30.0% | |
| TGTGACCAAAGAAAATTTCT+TGG | - | chr4.2:23475712-23475731 | MS.gene39565:intron | 30.0% | |
| TTAAATAAACATTTGGACGG+TGG | + | chr4.2:23475236-23475255 | None:intergenic | 30.0% | |
| TTCATTGAGTCTAAACATGT+GGG | - | chr4.2:23474429-23474448 | MS.gene39565:CDS | 30.0% | |
| TTGTAAACTGTTGCAATCAT+AGG | + | chr4.2:23475494-23475513 | None:intergenic | 30.0% | |
| ! | CCTATCATTTTACATGTAAC+AGG | + | chr4.2:23474721-23474740 | None:intergenic | 30.0% |
| ! | CGTTTGGATGCATTTTATAA+GGG | - | chr4.2:23476838-23476857 | MS.gene39565:CDS | 30.0% |
| !! | ATGGATATTTTTATCCACCA+TGG | + | chr4.2:23476181-23476200 | None:intergenic | 30.0% |
| !! | CATTTTGTTTGTTTCTTTGC+GGG | - | chr4.2:23474616-23474635 | MS.gene39565:intron | 30.0% |
| !! | CGTGACTTCTATTTTGAAAA+AGG | + | chr4.2:23475156-23475175 | None:intergenic | 30.0% |
| !! | CTATTTTGAAAAAGGCTAAC+AGG | + | chr4.2:23475148-23475167 | None:intergenic | 30.0% |
| !! | GTTACTTACTTGTTATGAGT+AGG | + | chr4.2:23476940-23476959 | None:intergenic | 30.0% |
| !! | TAATTTGTTCTTTGGAAGCT+GGG | - | chr4.2:23473955-23473974 | MS.gene39565:CDS | 30.0% |
| !! | TACTTACTTGTTATGAGTAG+GGG | + | chr4.2:23476938-23476957 | None:intergenic | 30.0% |
| !! | TACTTTATTTCTATCCATGG+TGG | - | chr4.2:23476164-23476183 | MS.gene39565:intron | 30.0% |
| AACCAAAGCATACTCATGAT+TGG | + | chr4.2:23475761-23475780 | None:intergenic | 35.0% | |
| ACATGATTAGAGCTGCATTT+AGG | + | chr4.2:23477362-23477381 | None:intergenic | 35.0% | |
| ACTATACCGTACACCATATT+TGG | - | chr4.2:23476389-23476408 | MS.gene39565:intron | 35.0% | |
| ATCTATACTAAGGATCCAAC+TGG | - | chr4.2:23477282-23477301 | MS.gene39565:CDS | 35.0% | |
| CAAAGAAAATTTCTTGGTCC+TGG | - | chr4.2:23475718-23475737 | MS.gene39565:intron | 35.0% | |
| CTATAAAAGCTGGTAAAGCA+TGG | - | chr4.2:23476460-23476479 | MS.gene39565:intron | 35.0% | |
| GAAAAGCTTGTAGTGACATT+AGG | + | chr4.2:23474487-23474506 | None:intergenic | 35.0% | |
| GATTGCAACAGTTTACAAGT+TGG | - | chr4.2:23475496-23475515 | MS.gene39565:intron | 35.0% | |
| GGATCCTTAGTATAGATAGA+AGG | + | chr4.2:23477279-23477298 | None:intergenic | 35.0% | |
| GTTAAAGAACATGAAGAAGC+AGG | - | chr4.2:23477203-23477222 | MS.gene39565:CDS | 35.0% | |
| TATCCACCAAATATGGTGTA+CGG | + | chr4.2:23476398-23476417 | None:intergenic | 35.0% | |
| TATCCATATTCGTGGATATC+CGG | - | chr4.2:23476194-23476213 | MS.gene39565:intron | 35.0% | |
| TCTTCTCTCTCTTCTTTCTT+TGG | - | chr4.2:23475688-23475707 | MS.gene39565:intron | 35.0% | |
| TGATTGGAGAAATTCTTAGG+TGG | + | chr4.2:23475745-23475764 | None:intergenic | 35.0% | |
| TGTGACCAAACCAAATTTCT+TGG | + | chr4.2:23475603-23475622 | None:intergenic | 35.0% | |
| TGTGTCATCAACATCATTCA+TGG | - | chr4.2:23475552-23475571 | MS.gene39565:intron | 35.0% | |
| TTATAAGGGATTGACCACTT+GGG | - | chr4.2:23476852-23476871 | MS.gene39565:CDS | 35.0% | |
| TTCAAAATAGAAGTCACGTG+TGG | - | chr4.2:23475158-23475177 | MS.gene39565:intron | 35.0% | |
| TTGTTCACTACATCATTTGC+AGG | + | chr4.2:23477180-23477199 | None:intergenic | 35.0% | |
| TTTATAAGGGATTGACCACT+TGG | - | chr4.2:23476851-23476870 | MS.gene39565:CDS | 35.0% | |
| ! | ATGTCACTACAAGCTTTTCT+AGG | - | chr4.2:23474488-23474507 | MS.gene39565:CDS | 35.0% |
| ! | CAGGACCAAGAAATTTTCTT+TGG | + | chr4.2:23475720-23475739 | None:intergenic | 35.0% |
| ! | CCGTTTGGATGCATTTTATA+AGG | - | chr4.2:23476837-23476856 | MS.gene39565:CDS | 35.0% |
| ! | TATAGTTTGGTAACACGTGA+CGG | + | chr4.2:23475338-23475357 | None:intergenic | 35.0% |
| !! | AGATGGTTCTAATCTAGTGA+GGG | - | chr4.2:23476807-23476826 | MS.gene39565:CDS | 35.0% |
| !! | GTAATTTGTTCTTTGGAAGC+TGG | - | chr4.2:23473954-23473973 | MS.gene39565:CDS | 35.0% |
| !! | TTATTTGGCTTGCTTCATTC+AGG | - | chr4.2:23476770-23476789 | MS.gene39565:CDS | 35.0% |
| !!! | GAGAGGATTTTTTGAATAGG+TGG | - | chr4.2:23474377-23474396 | MS.gene39565:CDS | 35.0% |
| !!! | GGATTTTTTGAATAGGTGGA+AGG | - | chr4.2:23474381-23474400 | MS.gene39565:CDS | 35.0% |
| !!! | GTGGAGAGGATTTTTTGAAT+AGG | - | chr4.2:23474374-23474393 | MS.gene39565:CDS | 35.0% |
| AATGTCTACTGTCTTCTTCC+AGG | - | chr4.2:23474519-23474538 | MS.gene39565:intron | 40.0% | |
| ACATGTTGATCTTCAACTCC+TGG | - | chr4.2:23476493-23476512 | MS.gene39565:intron | 40.0% | |
| ATACCGTACACCATATTTGG+TGG | - | chr4.2:23476392-23476411 | MS.gene39565:intron | 40.0% | |
| ATCAAACTGAGCTTCAACGA+AGG | + | chr4.2:23474023-23474042 | None:intergenic | 40.0% | |
| CAAACCAAATTTCTTGGTCC+TGG | + | chr4.2:23475597-23475616 | None:intergenic | 40.0% | |
| CAGCTTGAAGAATCATAGAG+AGG | + | chr4.2:23473998-23474017 | None:intergenic | 40.0% | |
| CAGGACCAAGAAATTTGGTT+TGG | - | chr4.2:23475595-23475614 | MS.gene39565:intron | 40.0% | |
| CTCCAATCATGAGTATGCTT+TGG | - | chr4.2:23475756-23475775 | MS.gene39565:intron | 40.0% | |
| GAGGTGATTTGAGGAAACTA+CGG | - | chr4.2:23476612-23476631 | MS.gene39565:intron | 40.0% | |
| GCACTGTAAAGTAAAACGAG+TGG | - | chr4.2:23475268-23475287 | MS.gene39565:intron | 40.0% | |
| GTCTTGTATGATTCATGCGT+CGG | - | chr4.2:23474459-23474478 | MS.gene39565:CDS | 40.0% | |
| GTTGACATTCTCTCGTTTGA+GGG | + | chr4.2:23475472-23475491 | None:intergenic | 40.0% | |
| TAAGCTCGAAATTGAAGGTC+TGG | - | chr4.2:23474780-23474799 | MS.gene39565:CDS | 40.0% | |
| TATCATATTGGGGATGGCAA+TGG | + | chr4.2:23476220-23476239 | None:intergenic | 40.0% | |
| TCAAACTGAGCTTCAACGAA+GGG | + | chr4.2:23474022-23474041 | None:intergenic | 40.0% | |
| TCTCGTTTGAGGGTGATAAT+AGG | + | chr4.2:23475462-23475481 | None:intergenic | 40.0% | |
| TGAACCAGGACCAAGAAATT+TGG | - | chr4.2:23475590-23475609 | MS.gene39565:intron | 40.0% | |
| TGACTACAATCAATGCCAGT+TGG | + | chr4.2:23477300-23477319 | None:intergenic | 40.0% | |
| TGGAAGAAGACAGTAGACAT+TGG | + | chr4.2:23474520-23474539 | None:intergenic | 40.0% | |
| TGGTAAAGCATGGTTAGACA+TGG | - | chr4.2:23476470-23476489 | MS.gene39565:intron | 40.0% | |
| TGGTGTACGGTATAGTTGTA+TGG | + | chr4.2:23476385-23476404 | None:intergenic | 40.0% | |
| TTCACTACATCATTTGCAGG+AGG | + | chr4.2:23477177-23477196 | None:intergenic | 40.0% | |
| TTCTAATCTAGTGAGGGACA+TGG | - | chr4.2:23476813-23476832 | MS.gene39565:CDS | 40.0% | |
| ! | AGGAGTATGTTCCAAGTATC+AGG | + | chr4.2:23477342-23477361 | None:intergenic | 40.0% |
| ! | AGGTGGGATTTTATCAGAGA+TGG | - | chr4.2:23476790-23476809 | MS.gene39565:CDS | 40.0% |
| ! | ATAGTTTGGTAACACGTGAC+GGG | + | chr4.2:23475337-23475356 | None:intergenic | 40.0% |
| ! | CTCGTTTTACTTTACAGTGC+AGG | + | chr4.2:23475268-23475287 | None:intergenic | 40.0% |
| ! | TGCAACAGTTTACAAGTTGG+AGG | - | chr4.2:23475499-23475518 | MS.gene39565:intron | 40.0% |
| ! | TTTTTGTGGTGTAGGTTCAG+TGG | - | chr4.2:23474355-23474374 | MS.gene39565:CDS | 40.0% |
| !! | CTGGCATTGATTGTAGTCAT+TGG | - | chr4.2:23477301-23477320 | MS.gene39565:CDS | 40.0% |
| !! | GAGATGGTTCTAATCTAGTG+AGG | - | chr4.2:23476806-23476825 | MS.gene39565:CDS | 40.0% |
| AACCGAAGAAGACATGTAGC+GGG | - | chr4.2:23477109-23477128 | MS.gene39565:intron | 45.0% | |
| AAGTATCAGGTAGTCCTGGT+AGG | + | chr4.2:23477329-23477348 | None:intergenic | 45.0% | |
| ACATCATTTGCAGGAGGTAG+AGG | + | chr4.2:23477171-23477190 | None:intergenic | 45.0% | |
| ACGAGTGGCTAAGATTACAC+TGG | - | chr4.2:23475283-23475302 | MS.gene39565:intron | 45.0% | |
| ACGCTGGACTCTATAAAAGC+TGG | - | chr4.2:23476450-23476469 | MS.gene39565:intron | 45.0% | |
| AGATTGCATGCACAGGACTA+TGG | - | chr4.2:23476354-23476373 | MS.gene39565:intron | 45.0% | |
| ATAGAAGTCACGTGTGGACT+AGG | - | chr4.2:23475164-23475183 | MS.gene39565:intron | 45.0% | |
| ATCATTTGCAGGAGGTAGAG+GGG | + | chr4.2:23477169-23477188 | None:intergenic | 45.0% | |
| ATCCACACTGGAGATTTACG+AGG | - | chr4.2:23476525-23476544 | MS.gene39565:intron | 45.0% | |
| ATGTCCAGTGAAAAGGACAC+AGG | + | chr4.2:23475197-23475216 | None:intergenic | 45.0% | |
| CATCATTTGCAGGAGGTAGA+GGG | + | chr4.2:23477170-23477189 | None:intergenic | 45.0% | |
| CCTTTCTCCTTGAATCCAGA+GGG | - | chr4.2:23477073-23477092 | MS.gene39565:intron | 45.0% | |
| CTGATTCATGTGCTTTACCC+AGG | - | chr4.2:23474095-23474114 | MS.gene39565:CDS | 45.0% | |
| CTGGGTAAAGCACATGAATC+AGG | + | chr4.2:23474097-23474116 | None:intergenic | 45.0% | |
| GAACCGAAGAAGACATGTAG+CGG | - | chr4.2:23477108-23477127 | MS.gene39565:intron | 45.0% | |
| GAGAAACTCTTGTGTGAACC+AGG | - | chr4.2:23475576-23475595 | MS.gene39565:intron | 45.0% | |
| GAGAAATTCTTAGGTGGTCC+AGG | + | chr4.2:23475739-23475758 | None:intergenic | 45.0% | |
| GGTTGACATTCTCTCGTTTG+AGG | + | chr4.2:23475473-23475492 | None:intergenic | 45.0% | |
| TACCAGGACTACCTGATACT+TGG | - | chr4.2:23477328-23477347 | MS.gene39565:CDS | 45.0% | |
| TCCACACTGGAGATTTACGA+GGG | - | chr4.2:23476526-23476545 | MS.gene39565:intron | 45.0% | |
| TCCTTTCTCCTTGAATCCAG+AGG | - | chr4.2:23477072-23477091 | MS.gene39565:intron | 45.0% | |
| TGATCTTCAACTCCTGGCAT+TGG | - | chr4.2:23476499-23476518 | MS.gene39565:intron | 45.0% | |
| TTCCAAGTATCAGGTAGTCC+TGG | + | chr4.2:23477333-23477352 | None:intergenic | 45.0% | |
| ! | TGTGTCCTTTTCACTGGACA+TGG | - | chr4.2:23475196-23475215 | MS.gene39565:intron | 45.0% |
| ! | TTGACTTTTGTGCCCTTGCT+GGG | + | chr4.2:23473928-23473947 | None:intergenic | 45.0% |
| !! | TTGGCTTGCTTCATTCAGGT+GGG | - | chr4.2:23476774-23476793 | MS.gene39565:CDS | 45.0% |
| !! | TTTGACTTTTGTGCCCTTGC+TGG | + | chr4.2:23473929-23473948 | None:intergenic | 45.0% |
| !! | TTTGGCTTGCTTCATTCAGG+TGG | - | chr4.2:23476773-23476792 | MS.gene39565:CDS | 45.0% |
| !! | AAAATTATTAAATAAACATT+TGG | + | chr4.2:23475243-23475262 | None:intergenic | 5.0% |
| !!! | ATGTTTTAAATTTTTAAATA+AGG | + | chr4.2:23475997-23476016 | None:intergenic | 5.0% |
| !!! | TATATTTTAACTATATATAT+AGG | + | chr4.2:23475012-23475031 | None:intergenic | 5.0% |
| AATCCTGCCCTCTGGATTCA+AGG | + | chr4.2:23477083-23477102 | None:intergenic | 50.0% | |
| ACCCTCGTAAATCTCCAGTG+TGG | + | chr4.2:23476530-23476549 | None:intergenic | 50.0% | |
| ACCGAAGAAGACATGTAGCG+GGG | - | chr4.2:23477110-23477129 | MS.gene39565:intron | 50.0% | |
| ATATTGGGGATGGCAATGGC+CGG | + | chr4.2:23476216-23476235 | None:intergenic | 50.0% | |
| CCCTCTGGATTCAAGGAGAA+AGG | + | chr4.2:23477076-23477095 | None:intergenic | 50.0% | |
| CGGGGAAGTTGAACCATTAC+CGG | - | chr4.2:23477128-23477147 | MS.gene39565:intron | 50.0% | |
| CTGCACCATGTCCAGTGAAA+AGG | + | chr4.2:23475204-23475223 | None:intergenic | 50.0% | |
| CTTGGAGAGATTGCATGCAC+AGG | - | chr4.2:23476347-23476366 | MS.gene39565:intron | 50.0% | |
| GGATATGTGGTTCCCGGTAA+TGG | + | chr4.2:23477144-23477163 | None:intergenic | 50.0% | |
| GGGGAAGTTGAACCATTACC+GGG | - | chr4.2:23477129-23477148 | MS.gene39565:intron | 50.0% | |
| TCCCCGCTACATGTCTTCTT+CGG | + | chr4.2:23477114-23477133 | None:intergenic | 50.0% | |
| TGGCCGGATATCCACGAATA+TGG | + | chr4.2:23476200-23476219 | None:intergenic | 50.0% | |
| TTCATTCCAATCCTGCCCTC+TGG | + | chr4.2:23477091-23477110 | None:intergenic | 50.0% | |
| TTGAATCCAGAGGGCAGGAT+TGG | - | chr4.2:23477082-23477101 | MS.gene39565:intron | 50.0% | |
| TTTCACTGGACATGGTGCAG+TGG | - | chr4.2:23475204-23475223 | MS.gene39565:intron | 50.0% | |
| ! | CTCTCCTGTGTCCTTTTCAC+TGG | - | chr4.2:23475190-23475209 | MS.gene39565:intron | 50.0% |
| ! | TCTTCAACTCCTGGCATTGG+TGG | - | chr4.2:23476502-23476521 | MS.gene39565:intron | 50.0% |
| ! | TGTAGTCATTGGTGCCTACC+AGG | - | chr4.2:23477312-23477331 | MS.gene39565:CDS | 50.0% |
| ! | TGTTGGTAGAGTGCTTACGC+TGG | - | chr4.2:23476434-23476453 | MS.gene39565:intron | 50.0% |
| !! | ATTGACCACTTGGGCTGGTT+GGG | - | chr4.2:23476861-23476880 | MS.gene39565:CDS | 50.0% |
| AACAGATCCCCTGCAGTGAC+TGG | + | chr4.2:23475314-23475333 | None:intergenic | 55.0% | |
| AAGGGATTGACCACTTGGGC+TGG | - | chr4.2:23476856-23476875 | MS.gene39565:CDS | 55.0% | |
| AGGTAGAGGGGCTGGATATG+TGG | + | chr4.2:23477157-23477176 | None:intergenic | 55.0% | |
| AGTGAGGGACATGGACCGTT+TGG | - | chr4.2:23476822-23476841 | MS.gene39565:CDS | 55.0% | |
| AGTGTGGATCCACCAATGCC+AGG | + | chr4.2:23476514-23476533 | None:intergenic | 55.0% | |
| ATCAACCCAACCAGCCCAAG+TGG | + | chr4.2:23476869-23476888 | None:intergenic | 55.0% | |
| GTGGTGTAGGTTCAGTGGAG+AGG | - | chr4.2:23474360-23474379 | MS.gene39565:CDS | 55.0% | |
| TCTCCTTGAATCCAGAGGGC+AGG | - | chr4.2:23477077-23477096 | MS.gene39565:intron | 55.0% | |
| TGGACTCTCCAGTCACTGCA+GGG | - | chr4.2:23475303-23475322 | MS.gene39565:intron | 55.0% | |
| !! | GATTGACCACTTGGGCTGGT+TGG | - | chr4.2:23476860-23476879 | MS.gene39565:CDS | 55.0% |
| !! | TGGCATTGGTGGATCCACAC+TGG | - | chr4.2:23476513-23476532 | MS.gene39565:intron | 55.0% |
| CTGGACTCTCCAGTCACTGC+AGG | - | chr4.2:23475302-23475321 | MS.gene39565:intron | 60.0% | |
| GGACTCTCCAGTCACTGCAG+GGG | - | chr4.2:23475304-23475323 | MS.gene39565:intron | 60.0% | |
| GGGGCTGGATATGTGGTTCC+CGG | + | chr4.2:23477150-23477169 | None:intergenic | 60.0% | |
| TTTGCAGGAGGTAGAGGGGC+TGG | + | chr4.2:23477165-23477184 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 23473920 | 23477383 | 23473920 | ID=MS.gene39565 |
| chr4.2 | mRNA | 23473920 | 23477383 | 23473920 | ID=MS.gene39565.t1;Parent=MS.gene39565 |
| chr4.2 | exon | 23477187 | 23477383 | 23477187 | ID=MS.gene39565.t1.exon1;Parent=MS.gene39565.t1 |
| chr4.2 | CDS | 23477187 | 23477383 | 23477187 | ID=cds.MS.gene39565.t1;Parent=MS.gene39565.t1 |
| chr4.2 | exon | 23476763 | 23476934 | 23476763 | ID=MS.gene39565.t1.exon2;Parent=MS.gene39565.t1 |
| chr4.2 | CDS | 23476763 | 23476934 | 23476763 | ID=cds.MS.gene39565.t1;Parent=MS.gene39565.t1 |
| chr4.2 | exon | 23474756 | 23474934 | 23474756 | ID=MS.gene39565.t1.exon3;Parent=MS.gene39565.t1 |
| chr4.2 | CDS | 23474756 | 23474934 | 23474756 | ID=cds.MS.gene39565.t1;Parent=MS.gene39565.t1 |
| chr4.2 | exon | 23474353 | 23474511 | 23474353 | ID=MS.gene39565.t1.exon4;Parent=MS.gene39565.t1 |
| chr4.2 | CDS | 23474353 | 23474511 | 23474353 | ID=cds.MS.gene39565.t1;Parent=MS.gene39565.t1 |
| chr4.2 | exon | 23473920 | 23474211 | 23473920 | ID=MS.gene39565.t1.exon5;Parent=MS.gene39565.t1 |
| chr4.2 | CDS | 23473920 | 23474211 | 23473920 | ID=cds.MS.gene39565.t1;Parent=MS.gene39565.t1 |
| Gene Sequence |
| Protein sequence |
