Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47537.t1 | XP_003608140.2 | 97 | 333 | 8 | 1 | 1 | 333 | 22 | 352 | 2.40E-196 | 694.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47537.t1 | Q8VY22 | 66.6 | 326 | 107 | 2 | 9 | 333 | 56 | 380 | 3.3e-138 | 492.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47537.t1 | G7JPR2 | 97.0 | 333 | 8 | 1 | 1 | 333 | 22 | 352 | 1.7e-196 | 694.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049351 | MS.gene47537 | 0.850704 | 1.43E-60 | -1.69E-46 |
| MS.gene049356 | MS.gene47537 | 0.804088 | 2.55E-49 | -1.69E-46 |
| MS.gene049609 | MS.gene47537 | 0.807759 | 4.32E-50 | -1.69E-46 |
| MS.gene049614 | MS.gene47537 | 0.81417 | 1.77E-51 | -1.69E-46 |
| MS.gene049661 | MS.gene47537 | 0.802001 | 6.90E-49 | -1.69E-46 |
| MS.gene049662 | MS.gene47537 | 0.802538 | 5.35E-49 | -1.69E-46 |
| MS.gene049760 | MS.gene47537 | 0.806765 | 7.02E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene47537 | 0.813236 | 2.84E-51 | -1.69E-46 |
| MS.gene050076 | MS.gene47537 | 0.82216 | 2.75E-53 | -1.69E-46 |
| MS.gene050301 | MS.gene47537 | 0.820477 | 6.72E-53 | -1.69E-46 |
| MS.gene050397 | MS.gene47537 | 0.802995 | 4.30E-49 | -1.69E-46 |
| MS.gene050432 | MS.gene47537 | 0.84994 | 2.34E-60 | -1.69E-46 |
| MS.gene050520 | MS.gene47537 | 0.801893 | 7.26E-49 | -1.69E-46 |
| MS.gene05053 | MS.gene47537 | 0.805498 | 1.30E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene47537 | 0.80636 | 8.54E-50 | -1.69E-46 |
| MS.gene050767 | MS.gene47537 | 0.86087 | 1.53E-63 | -1.69E-46 |
| MS.gene050770 | MS.gene47537 | 0.865242 | 6.81E-65 | -1.69E-46 |
| MS.gene050772 | MS.gene47537 | 0.824165 | 9.36E-54 | -1.69E-46 |
| MS.gene05101 | MS.gene47537 | 0.824665 | 7.14E-54 | -1.69E-46 |
| MS.gene05105 | MS.gene47537 | 0.840468 | 8.54E-58 | -1.69E-46 |
| MS.gene051228 | MS.gene47537 | 0.835203 | 1.92E-56 | -1.69E-46 |
| MS.gene051255 | MS.gene47537 | 0.81326 | 2.80E-51 | -1.69E-46 |
| MS.gene051387 | MS.gene47537 | 0.810984 | 8.78E-51 | -1.69E-46 |
| MS.gene051858 | MS.gene47537 | 0.823451 | 1.38E-53 | -1.69E-46 |
| MS.gene051877 | MS.gene47537 | 0.807022 | 6.19E-50 | -1.69E-46 |
| MS.gene052078 | MS.gene47537 | 0.841264 | 5.28E-58 | -1.69E-46 |
| MS.gene052188 | MS.gene47537 | 0.814711 | 1.34E-51 | -1.69E-46 |
| MS.gene052271 | MS.gene47537 | 0.823073 | 1.69E-53 | -1.69E-46 |
| MS.gene052290 | MS.gene47537 | 0.841657 | 4.16E-58 | -1.69E-46 |
| MS.gene052310 | MS.gene47537 | 0.840419 | 8.80E-58 | -1.69E-46 |
| MS.gene052322 | MS.gene47537 | 0.825926 | 3.59E-54 | -1.69E-46 |
| MS.gene052326 | MS.gene47537 | 0.802037 | 6.78E-49 | -1.69E-46 |
| MS.gene052340 | MS.gene47537 | 0.80801 | 3.82E-50 | -1.69E-46 |
| MS.gene052379 | MS.gene47537 | 0.825263 | 5.16E-54 | -1.69E-46 |
| MS.gene052421 | MS.gene47537 | 0.811976 | 5.35E-51 | -1.69E-46 |
| MS.gene052484 | MS.gene47537 | 0.836485 | 9.10E-57 | -1.69E-46 |
| MS.gene052485 | MS.gene47537 | 0.814397 | 1.57E-51 | -1.69E-46 |
| MS.gene052508 | MS.gene47537 | 0.814972 | 1.17E-51 | -1.69E-46 |
| MS.gene052510 | MS.gene47537 | 0.824588 | 7.44E-54 | -1.69E-46 |
| MS.gene053009 | MS.gene47537 | 0.852881 | 3.45E-61 | -1.69E-46 |
| MS.gene053103 | MS.gene47537 | 0.852137 | 5.62E-61 | -1.69E-46 |
| MS.gene053104 | MS.gene47537 | 0.829425 | 5.19E-55 | -1.69E-46 |
| MS.gene053207 | MS.gene47537 | 0.824461 | 7.97E-54 | -1.69E-46 |
| MS.gene053209 | MS.gene47537 | 0.874359 | 7.18E-68 | -1.69E-46 |
| MS.gene053322 | MS.gene47537 | 0.833009 | 6.82E-56 | -1.69E-46 |
| MS.gene053384 | MS.gene47537 | 0.801141 | 1.04E-48 | -1.69E-46 |
| MS.gene053449 | MS.gene47537 | 0.802364 | 5.81E-49 | -1.69E-46 |
| MS.gene053632 | MS.gene47537 | 0.809836 | 1.55E-50 | -1.69E-46 |
| MS.gene053813 | MS.gene47537 | 0.817999 | 2.46E-52 | -1.69E-46 |
| MS.gene053916 | MS.gene47537 | 0.82496 | 6.08E-54 | -1.69E-46 |
| MS.gene054376 | MS.gene47537 | 0.847859 | 8.86E-60 | -1.69E-46 |
| MS.gene054802 | MS.gene47537 | 0.837157 | 6.13E-57 | -1.69E-46 |
| MS.gene054803 | MS.gene47537 | 0.838739 | 2.40E-57 | -1.69E-46 |
| MS.gene054804 | MS.gene47537 | 0.841694 | 4.07E-58 | -1.69E-46 |
| MS.gene05505 | MS.gene47537 | 0.831411 | 1.70E-55 | -1.69E-46 |
| MS.gene055116 | MS.gene47537 | 0.801726 | 7.86E-49 | -1.69E-46 |
| MS.gene055206 | MS.gene47537 | 0.831251 | 1.86E-55 | -1.69E-46 |
| MS.gene055254 | MS.gene47537 | 0.849123 | 3.96E-60 | -1.69E-46 |
| MS.gene055277 | MS.gene47537 | 0.844703 | 6.41E-59 | -1.69E-46 |
| MS.gene055397 | MS.gene47537 | 0.814582 | 1.43E-51 | -1.69E-46 |
| MS.gene055412 | MS.gene47537 | 0.807132 | 5.87E-50 | -1.69E-46 |
| MS.gene055422 | MS.gene47537 | 0.814206 | 1.73E-51 | -1.69E-46 |
| MS.gene055428 | MS.gene47537 | 0.803859 | 2.85E-49 | -1.69E-46 |
| MS.gene055499 | MS.gene47537 | 0.830948 | 2.20E-55 | -1.69E-46 |
| MS.gene055647 | MS.gene47537 | 0.807372 | 5.22E-50 | -1.69E-46 |
| MS.gene055722 | MS.gene47537 | 0.834127 | 3.59E-56 | -1.69E-46 |
| MS.gene05592 | MS.gene47537 | 0.882855 | 7.34E-71 | -1.69E-46 |
| MS.gene05602 | MS.gene47537 | 0.800938 | 1.14E-48 | -1.69E-46 |
| MS.gene056407 | MS.gene47537 | 0.826043 | 3.37E-54 | -1.69E-46 |
| MS.gene056410 | MS.gene47537 | 0.82961 | 4.67E-55 | -1.69E-46 |
| MS.gene056609 | MS.gene47537 | 0.8222 | 2.69E-53 | -1.69E-46 |
| MS.gene056796 | MS.gene47537 | 0.81527 | 1.01E-51 | -1.69E-46 |
| MS.gene057011 | MS.gene47537 | 0.818413 | 1.99E-52 | -1.69E-46 |
| MS.gene057123 | MS.gene47537 | 0.809168 | 2.16E-50 | -1.69E-46 |
| MS.gene057129 | MS.gene47537 | 0.8571 | 2.05E-62 | -1.69E-46 |
| MS.gene057146 | MS.gene47537 | 0.807619 | 4.63E-50 | -1.69E-46 |
| MS.gene057295 | MS.gene47537 | 0.808216 | 3.45E-50 | -1.69E-46 |
| MS.gene057331 | MS.gene47537 | 0.832038 | 1.19E-55 | -1.69E-46 |
| MS.gene05735 | MS.gene47537 | 0.806993 | 6.28E-50 | -1.69E-46 |
| MS.gene057416 | MS.gene47537 | 0.832 | 1.21E-55 | -1.69E-46 |
| MS.gene058006 | MS.gene47537 | 0.856533 | 3.02E-62 | -1.69E-46 |
| MS.gene058082 | MS.gene47537 | 0.825848 | 3.75E-54 | -1.69E-46 |
| MS.gene05811 | MS.gene47537 | 0.808012 | 3.82E-50 | -1.69E-46 |
| MS.gene058293 | MS.gene47537 | 0.853492 | 2.31E-61 | -1.69E-46 |
| MS.gene058323 | MS.gene47537 | 0.840181 | 1.01E-57 | -1.69E-46 |
| MS.gene058365 | MS.gene47537 | 0.804867 | 1.76E-49 | -1.69E-46 |
| MS.gene058660 | MS.gene47537 | 0.82817 | 1.04E-54 | -1.69E-46 |
| MS.gene058723 | MS.gene47537 | 0.804605 | 1.99E-49 | -1.69E-46 |
| MS.gene058787 | MS.gene47537 | 0.803551 | 3.30E-49 | -1.69E-46 |
| MS.gene058993 | MS.gene47537 | 0.813631 | 2.32E-51 | -1.69E-46 |
| MS.gene059326 | MS.gene47537 | 0.8117 | 6.14E-51 | -1.69E-46 |
| MS.gene059518 | MS.gene47537 | 0.808856 | 2.52E-50 | -1.69E-46 |
| MS.gene059536 | MS.gene47537 | 0.801538 | 8.59E-49 | -1.69E-46 |
| MS.gene059676 | MS.gene47537 | 0.833491 | 5.17E-56 | -1.69E-46 |
| MS.gene059688 | MS.gene47537 | 0.850974 | 1.20E-60 | -1.69E-46 |
| MS.gene059692 | MS.gene47537 | 0.857564 | 1.50E-62 | -1.69E-46 |
| MS.gene059695 | MS.gene47537 | 0.858954 | 5.78E-63 | -1.69E-46 |
| MS.gene059711 | MS.gene47537 | 0.840387 | 8.96E-58 | -1.69E-46 |
| MS.gene059894 | MS.gene47537 | 0.818092 | 2.35E-52 | -1.69E-46 |
| MS.gene059902 | MS.gene47537 | 0.820748 | 5.82E-53 | -1.69E-46 |
| MS.gene059960 | MS.gene47537 | 0.839549 | 1.48E-57 | -1.69E-46 |
| MS.gene059974 | MS.gene47537 | 0.832815 | 7.62E-56 | -1.69E-46 |
| MS.gene060005 | MS.gene47537 | 0.808061 | 3.73E-50 | -1.69E-46 |
| MS.gene060193 | MS.gene47537 | 0.803414 | 3.53E-49 | -1.69E-46 |
| MS.gene06037 | MS.gene47537 | 0.836542 | 8.80E-57 | -1.69E-46 |
| MS.gene060403 | MS.gene47537 | 0.803928 | 2.76E-49 | -1.69E-46 |
| MS.gene060804 | MS.gene47537 | 0.827367 | 1.63E-54 | -1.69E-46 |
| MS.gene060818 | MS.gene47537 | 0.840366 | 9.08E-58 | -1.69E-46 |
| MS.gene060837 | MS.gene47537 | 0.824517 | 7.73E-54 | -1.69E-46 |
| MS.gene06092 | MS.gene47537 | 0.808552 | 2.93E-50 | -1.69E-46 |
| MS.gene061041 | MS.gene47537 | 0.804482 | 2.11E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene47537 | 0.811663 | 6.25E-51 | -1.69E-46 |
| MS.gene061200 | MS.gene47537 | 0.841948 | 3.49E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene47537 | MS.gene065125 | PPI |
| MS.gene47537 | MS.gene039339 | PPI |
| MS.gene47537 | MS.gene94488 | PPI |
| MS.gene47537 | MS.gene31379 | PPI |
| MS.gene47537 | MS.gene73821 | PPI |
| MS.gene97826 | MS.gene47537 | PPI |
| MS.gene47537 | MS.gene028817 | PPI |
| MS.gene47537 | MS.gene72457 | PPI |
| MS.gene47537 | MS.gene54859 | PPI |
| MS.gene47537 | MS.gene71840 | PPI |
| MS.gene47537 | MS.gene72456 | PPI |
| MS.gene029396 | MS.gene47537 | PPI |
| MS.gene47537 | MS.gene039341 | PPI |
| MS.gene47537 | MS.gene006674 | PPI |
| MS.gene47537 | MS.gene97825 | PPI |
| MS.gene47537 | MS.gene043504 | PPI |
| MS.gene031625 | MS.gene47537 | PPI |
| MS.gene47537 | MS.gene76296 | PPI |
| MS.gene47537 | MS.gene045508 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47537.t1 | MTR_4g088030 | 96.997 | 333 | 8 | 1 | 1 | 333 | 22 | 352 | 0.0 | 671 |
| MS.gene47537.t1 | MTR_4g087730 | 86.544 | 327 | 44 | 0 | 7 | 333 | 38 | 364 | 0.0 | 597 |
| MS.gene47537.t1 | MTR_2g015720 | 76.161 | 323 | 76 | 1 | 11 | 333 | 39 | 360 | 0.0 | 526 |
| MS.gene47537.t1 | MTR_2g091175 | 59.633 | 327 | 129 | 2 | 7 | 332 | 43 | 367 | 2.39e-148 | 422 |
| MS.gene47537.t1 | MTR_4g079700 | 59.190 | 321 | 130 | 1 | 11 | 331 | 44 | 363 | 9.47e-142 | 405 |
| MS.gene47537.t1 | MTR_3g049330 | 56.347 | 323 | 139 | 2 | 12 | 332 | 29 | 351 | 1.23e-136 | 392 |
| MS.gene47537.t1 | MTR_2g073510 | 54.573 | 328 | 146 | 3 | 4 | 328 | 23 | 350 | 1.75e-131 | 379 |
| MS.gene47537.t1 | MTR_3g021060 | 51.534 | 326 | 156 | 2 | 7 | 331 | 39 | 363 | 1.75e-127 | 369 |
| MS.gene47537.t1 | MTR_3g035830 | 50.920 | 326 | 158 | 2 | 7 | 331 | 24 | 348 | 1.73e-126 | 366 |
| MS.gene47537.t1 | MTR_5g034810 | 53.395 | 324 | 147 | 3 | 11 | 332 | 32 | 353 | 2.30e-125 | 363 |
| MS.gene47537.t1 | MTR_3g021090 | 52.848 | 316 | 147 | 2 | 13 | 327 | 30 | 344 | 3.83e-125 | 365 |
| MS.gene47537.t1 | MTR_3g464570 | 50.742 | 337 | 150 | 4 | 12 | 332 | 41 | 377 | 3.50e-120 | 351 |
| MS.gene47537.t1 | MTR_5g071350 | 48.870 | 354 | 157 | 4 | 3 | 332 | 47 | 400 | 4.07e-119 | 349 |
| MS.gene47537.t1 | MTR_2g073500 | 47.561 | 328 | 153 | 7 | 14 | 332 | 29 | 346 | 9.14e-108 | 318 |
| MS.gene47537.t1 | MTR_1g111010 | 46.483 | 327 | 157 | 9 | 11 | 332 | 29 | 342 | 4.42e-99 | 296 |
| MS.gene47537.t1 | MTR_0136s0010 | 39.359 | 343 | 184 | 6 | 14 | 333 | 170 | 511 | 8.32e-92 | 283 |
| MS.gene47537.t1 | MTR_7g093450 | 39.669 | 363 | 185 | 7 | 4 | 333 | 228 | 589 | 6.28e-90 | 281 |
| MS.gene47537.t1 | MTR_3g464570 | 50.370 | 270 | 118 | 4 | 79 | 332 | 4 | 273 | 1.16e-88 | 267 |
| MS.gene47537.t1 | MTR_1g050448 | 40.361 | 332 | 181 | 5 | 11 | 331 | 50 | 375 | 2.28e-88 | 270 |
| MS.gene47537.t1 | MTR_4g121560 | 39.106 | 358 | 188 | 8 | 2 | 333 | 102 | 455 | 1.60e-87 | 271 |
| MS.gene47537.t1 | MTR_4g126950 | 37.537 | 341 | 191 | 5 | 14 | 333 | 109 | 448 | 1.05e-83 | 260 |
| MS.gene47537.t1 | MTR_5g059400 | 37.391 | 345 | 191 | 6 | 12 | 332 | 173 | 516 | 5.67e-82 | 258 |
| MS.gene47537.t1 | MTR_1g116130 | 37.391 | 345 | 191 | 6 | 12 | 332 | 173 | 516 | 5.67e-82 | 258 |
| MS.gene47537.t1 | MTR_1g112210 | 36.047 | 344 | 194 | 7 | 4 | 331 | 49 | 382 | 1.82e-81 | 252 |
| MS.gene47537.t1 | MTR_5g033800 | 36.919 | 344 | 188 | 6 | 14 | 332 | 145 | 484 | 8.14e-81 | 254 |
| MS.gene47537.t1 | MTR_1g112210 | 36.047 | 344 | 181 | 8 | 4 | 331 | 49 | 369 | 2.83e-79 | 246 |
| MS.gene47537.t1 | MTR_8g069790 | 37.537 | 341 | 190 | 7 | 14 | 332 | 178 | 517 | 3.94e-79 | 251 |
| MS.gene47537.t1 | MTR_4g016940 | 36.842 | 342 | 192 | 7 | 14 | 331 | 86 | 427 | 4.01e-78 | 245 |
| MS.gene47537.t1 | MTR_3g070900 | 37.356 | 348 | 188 | 8 | 13 | 332 | 105 | 450 | 2.73e-77 | 244 |
| MS.gene47537.t1 | MTR_7g109550 | 38.138 | 333 | 189 | 7 | 14 | 331 | 137 | 467 | 1.21e-74 | 238 |
| MS.gene47537.t1 | MTR_5g082880 | 37.677 | 353 | 183 | 11 | 13 | 332 | 164 | 512 | 4.16e-74 | 237 |
| MS.gene47537.t1 | MTR_4g014440 | 35.127 | 353 | 201 | 8 | 8 | 332 | 56 | 408 | 2.81e-72 | 229 |
| MS.gene47537.t1 | MTR_8g463790 | 36.152 | 343 | 192 | 8 | 14 | 332 | 71 | 410 | 2.15e-71 | 228 |
| MS.gene47537.t1 | MTR_3g071650 | 34.694 | 343 | 200 | 8 | 14 | 332 | 89 | 431 | 7.19e-71 | 227 |
| MS.gene47537.t1 | MTR_7g070060 | 36.103 | 349 | 195 | 9 | 11 | 331 | 61 | 409 | 9.47e-70 | 223 |
| MS.gene47537.t1 | MTR_3g090120 | 38.000 | 350 | 188 | 9 | 6 | 332 | 117 | 460 | 1.01e-68 | 222 |
| MS.gene47537.t1 | MTR_1g058380 | 34.916 | 358 | 204 | 9 | 2 | 332 | 40 | 395 | 2.29e-68 | 219 |
| MS.gene47537.t1 | MTR_7g068920 | 35.652 | 345 | 198 | 7 | 11 | 331 | 77 | 421 | 4.08e-68 | 219 |
| MS.gene47537.t1 | MTR_2g022560 | 35.057 | 348 | 201 | 8 | 9 | 332 | 92 | 438 | 8.35e-68 | 219 |
| MS.gene47537.t1 | MTR_7g094750 | 35.411 | 353 | 196 | 9 | 8 | 332 | 85 | 433 | 1.31e-67 | 219 |
| MS.gene47537.t1 | MTR_5g083260 | 33.333 | 351 | 210 | 8 | 6 | 332 | 75 | 425 | 2.32e-66 | 215 |
| MS.gene47537.t1 | MTR_4g014430 | 34.493 | 345 | 199 | 9 | 11 | 331 | 105 | 446 | 1.46e-64 | 211 |
| MS.gene47537.t1 | MTR_8g093530 | 34.030 | 335 | 198 | 7 | 14 | 332 | 90 | 417 | 2.18e-63 | 207 |
| MS.gene47537.t1 | MTR_5g033800 | 35.865 | 237 | 134 | 4 | 14 | 235 | 145 | 378 | 4.11e-53 | 179 |
| MS.gene47537.t1 | MTR_7g070060 | 33.007 | 306 | 177 | 9 | 54 | 331 | 2 | 307 | 3.27e-48 | 164 |
| MS.gene47537.t1 | MTR_5g069320 | 33.981 | 309 | 135 | 8 | 41 | 324 | 122 | 386 | 2.29e-45 | 159 |
| MS.gene47537.t1 | MTR_7g094750 | 33.197 | 244 | 145 | 4 | 8 | 235 | 85 | 326 | 9.83e-45 | 156 |
| MS.gene47537.t1 | MTR_7g070060 | 34.177 | 237 | 146 | 4 | 11 | 237 | 61 | 297 | 2.26e-44 | 154 |
| MS.gene47537.t1 | MTR_5g035090 | 30.435 | 345 | 205 | 11 | 11 | 324 | 80 | 420 | 3.01e-39 | 144 |
| MS.gene47537.t1 | MTR_6g016875 | 31.183 | 372 | 203 | 13 | 3 | 331 | 47 | 408 | 1.89e-36 | 136 |
| MS.gene47537.t1 | MTR_5g035150 | 29.714 | 350 | 213 | 10 | 13 | 331 | 84 | 431 | 1.20e-35 | 134 |
| MS.gene47537.t1 | MTR_6g016880 | 29.060 | 351 | 213 | 8 | 13 | 333 | 77 | 421 | 5.76e-35 | 132 |
| MS.gene47537.t1 | MTR_8g093870 | 29.799 | 349 | 213 | 11 | 10 | 331 | 129 | 472 | 1.54e-34 | 132 |
| MS.gene47537.t1 | MTR_4g092830 | 28.775 | 351 | 213 | 13 | 14 | 332 | 48 | 393 | 1.65e-34 | 131 |
| MS.gene47537.t1 | MTR_6g061710 | 28.099 | 363 | 201 | 12 | 14 | 331 | 167 | 514 | 2.21e-34 | 132 |
| MS.gene47537.t1 | MTR_3g021150 | 55.660 | 106 | 46 | 1 | 198 | 302 | 1 | 106 | 6.90e-34 | 121 |
| MS.gene47537.t1 | MTR_4g125060 | 30.682 | 352 | 210 | 15 | 8 | 331 | 126 | 471 | 7.30e-33 | 127 |
| MS.gene47537.t1 | MTR_1g076690 | 28.090 | 356 | 208 | 12 | 11 | 327 | 220 | 566 | 7.82e-33 | 128 |
| MS.gene47537.t1 | MTR_7g019120 | 27.374 | 358 | 228 | 9 | 4 | 333 | 69 | 422 | 8.75e-33 | 126 |
| MS.gene47537.t1 | MTR_4g125060 | 30.925 | 346 | 205 | 15 | 14 | 331 | 171 | 510 | 9.40e-33 | 127 |
| MS.gene47537.t1 | MTR_4g125060 | 30.682 | 352 | 210 | 15 | 8 | 331 | 194 | 539 | 1.68e-32 | 127 |
| MS.gene47537.t1 | MTR_8g027900 | 28.649 | 370 | 207 | 15 | 5 | 332 | 202 | 556 | 4.89e-32 | 125 |
| MS.gene47537.t1 | MTR_5g035080 | 28.255 | 361 | 201 | 16 | 14 | 331 | 75 | 420 | 1.60e-31 | 123 |
| MS.gene47537.t1 | MTR_5g035070 | 26.724 | 348 | 224 | 9 | 14 | 331 | 87 | 433 | 9.52e-31 | 121 |
| MS.gene47537.t1 | MTR_3g109840 | 27.479 | 353 | 219 | 12 | 3 | 324 | 62 | 408 | 1.78e-30 | 120 |
| MS.gene47537.t1 | MTR_2g016060 | 29.050 | 358 | 205 | 15 | 15 | 333 | 56 | 403 | 2.11e-30 | 119 |
| MS.gene47537.t1 | MTR_6g007777 | 28.177 | 362 | 217 | 14 | 3 | 331 | 106 | 457 | 1.33e-29 | 118 |
| MS.gene47537.t1 | MTR_7g033230 | 27.066 | 351 | 218 | 11 | 14 | 331 | 264 | 609 | 1.96e-28 | 115 |
| MS.gene47537.t1 | MTR_8g099300 | 26.346 | 353 | 226 | 9 | 11 | 332 | 71 | 420 | 2.51e-28 | 114 |
| MS.gene47537.t1 | MTR_8g104970 | 26.796 | 362 | 223 | 12 | 5 | 331 | 111 | 465 | 4.12e-28 | 114 |
| MS.gene47537.t1 | MTR_7g033230 | 27.066 | 351 | 218 | 11 | 14 | 331 | 334 | 679 | 5.01e-28 | 115 |
| MS.gene47537.t1 | MTR_6g016240 | 27.528 | 356 | 218 | 12 | 10 | 331 | 67 | 416 | 1.34e-25 | 106 |
| MS.gene47537.t1 | MTR_7g019140 | 38.384 | 99 | 61 | 0 | 4 | 102 | 69 | 167 | 2.29e-19 | 84.3 |
| MS.gene47537.t1 | MTR_5g035120 | 40.659 | 91 | 54 | 0 | 14 | 104 | 75 | 165 | 1.45e-17 | 79.3 |
| MS.gene47537.t1 | MTR_3g021080 | 36.275 | 102 | 44 | 2 | 232 | 332 | 99 | 180 | 5.21e-16 | 75.5 |
| MS.gene47537.t1 | MTR_2g022580 | 29.600 | 125 | 74 | 3 | 74 | 184 | 2 | 126 | 2.63e-13 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47537.t1 | AT1G29050 | 66.159 | 328 | 109 | 2 | 7 | 333 | 54 | 380 | 1.06e-172 | 484 |
| MS.gene47537.t1 | AT2G34070 | 65.443 | 327 | 110 | 3 | 9 | 333 | 60 | 385 | 2.30e-167 | 471 |
| MS.gene47537.t1 | AT2G31110 | 58.176 | 318 | 133 | 0 | 14 | 331 | 45 | 362 | 2.08e-148 | 422 |
| MS.gene47537.t1 | AT2G42570 | 59.317 | 322 | 131 | 0 | 11 | 332 | 44 | 365 | 3.71e-147 | 419 |
| MS.gene47537.t1 | AT3G14850 | 53.354 | 328 | 148 | 3 | 9 | 332 | 29 | 355 | 1.40e-128 | 372 |
| MS.gene47537.t1 | AT2G30900 | 52.778 | 324 | 148 | 4 | 14 | 332 | 43 | 366 | 2.38e-124 | 361 |
| MS.gene47537.t1 | AT2G34070 | 67.063 | 252 | 80 | 3 | 84 | 333 | 1 | 251 | 4.51e-124 | 356 |
| MS.gene47537.t1 | AT1G78710 | 48.318 | 327 | 164 | 4 | 9 | 332 | 33 | 357 | 8.35e-121 | 352 |
| MS.gene47537.t1 | AT5G58600 | 49.568 | 347 | 158 | 5 | 3 | 332 | 55 | 401 | 5.60e-117 | 344 |
| MS.gene47537.t1 | AT2G30010 | 47.339 | 357 | 162 | 7 | 2 | 332 | 41 | 397 | 1.67e-109 | 325 |
| MS.gene47537.t1 | AT2G30010 | 47.339 | 357 | 162 | 7 | 2 | 332 | 84 | 440 | 2.48e-109 | 326 |
| MS.gene47537.t1 | AT2G31110 | 58.065 | 217 | 91 | 0 | 14 | 230 | 45 | 261 | 1.70e-99 | 295 |
| MS.gene47537.t1 | AT3G14850 | 54.150 | 253 | 111 | 3 | 84 | 332 | 1 | 252 | 6.14e-96 | 285 |
| MS.gene47537.t1 | AT2G31110 | 59.420 | 207 | 84 | 0 | 125 | 331 | 8 | 214 | 6.39e-94 | 278 |
| MS.gene47537.t1 | AT5G06700 | 40.698 | 344 | 180 | 6 | 13 | 333 | 254 | 596 | 7.10e-91 | 283 |
| MS.gene47537.t1 | AT3G12060 | 39.945 | 363 | 185 | 7 | 3 | 333 | 176 | 537 | 2.21e-89 | 278 |
| MS.gene47537.t1 | AT1G78710 | 40.673 | 327 | 136 | 5 | 9 | 332 | 26 | 297 | 2.34e-87 | 265 |
| MS.gene47537.t1 | AT2G30900 | 53.540 | 226 | 103 | 2 | 14 | 237 | 43 | 268 | 3.61e-86 | 261 |
| MS.gene47537.t1 | AT3G54260 | 38.806 | 335 | 179 | 7 | 14 | 332 | 51 | 375 | 1.84e-84 | 260 |
| MS.gene47537.t1 | AT5G20590 | 37.714 | 350 | 195 | 6 | 6 | 333 | 133 | 481 | 5.23e-84 | 262 |
| MS.gene47537.t1 | AT5G58600 | 50.420 | 238 | 116 | 2 | 2 | 237 | 54 | 291 | 2.67e-83 | 254 |
| MS.gene47537.t1 | AT5G49340 | 36.544 | 353 | 198 | 8 | 6 | 333 | 92 | 443 | 5.44e-81 | 253 |
| MS.gene47537.t1 | AT5G01360 | 37.101 | 345 | 192 | 7 | 12 | 331 | 34 | 378 | 1.87e-80 | 249 |
| MS.gene47537.t1 | AT5G01360 | 37.101 | 345 | 192 | 7 | 12 | 331 | 90 | 434 | 6.51e-80 | 250 |
| MS.gene47537.t1 | AT3G62390 | 37.861 | 346 | 195 | 8 | 5 | 332 | 129 | 472 | 2.16e-77 | 245 |
| MS.gene47537.t1 | AT1G60790 | 36.705 | 346 | 192 | 7 | 13 | 332 | 189 | 533 | 9.17e-77 | 245 |
| MS.gene47537.t1 | AT2G40150 | 35.493 | 355 | 193 | 9 | 12 | 332 | 69 | 421 | 3.19e-73 | 233 |
| MS.gene47537.t1 | AT1G73140 | 36.000 | 350 | 197 | 8 | 7 | 332 | 60 | 406 | 4.06e-73 | 232 |
| MS.gene47537.t1 | AT5G19160 | 36.415 | 357 | 189 | 11 | 9 | 332 | 94 | 445 | 2.25e-72 | 231 |
| MS.gene47537.t1 | AT3G55990 | 36.599 | 347 | 190 | 9 | 14 | 332 | 140 | 484 | 3.23e-72 | 232 |
| MS.gene47537.t1 | AT3G11030 | 35.493 | 355 | 202 | 9 | 4 | 332 | 96 | 449 | 4.28e-71 | 228 |
| MS.gene47537.t1 | AT5G06230 | 34.384 | 349 | 201 | 7 | 11 | 332 | 18 | 365 | 1.85e-70 | 224 |
| MS.gene47537.t1 | AT5G06230 | 34.384 | 349 | 201 | 7 | 11 | 332 | 59 | 406 | 4.66e-70 | 224 |
| MS.gene47537.t1 | AT3G06080 | 34.571 | 350 | 202 | 7 | 9 | 332 | 98 | 446 | 1.89e-69 | 224 |
| MS.gene47537.t1 | AT1G48880 | 36.012 | 336 | 181 | 8 | 14 | 328 | 115 | 437 | 4.26e-69 | 223 |
| MS.gene47537.t1 | AT2G38320 | 34.006 | 347 | 201 | 8 | 14 | 332 | 59 | 405 | 1.41e-67 | 218 |
| MS.gene47537.t1 | AT2G40320 | 35.493 | 355 | 201 | 10 | 4 | 332 | 71 | 423 | 2.44e-67 | 217 |
| MS.gene47537.t1 | AT2G40160 | 34.670 | 349 | 197 | 9 | 14 | 332 | 77 | 424 | 3.11e-67 | 217 |
| MS.gene47537.t1 | AT5G01620 | 33.333 | 354 | 209 | 9 | 2 | 331 | 99 | 449 | 4.81e-67 | 217 |
| MS.gene47537.t1 | AT5G01620 | 33.333 | 354 | 209 | 9 | 2 | 331 | 99 | 449 | 4.81e-67 | 217 |
| MS.gene47537.t1 | AT2G40160 | 34.670 | 349 | 197 | 9 | 14 | 332 | 77 | 424 | 4.83e-67 | 217 |
| MS.gene47537.t1 | AT5G01620 | 33.333 | 354 | 209 | 9 | 2 | 331 | 107 | 457 | 7.25e-67 | 217 |
| MS.gene47537.t1 | AT3G11570 | 34.877 | 324 | 189 | 6 | 30 | 332 | 98 | 420 | 3.56e-66 | 214 |
| MS.gene47537.t1 | AT2G38320 | 32.288 | 319 | 189 | 7 | 41 | 332 | 4 | 322 | 4.25e-57 | 188 |
| MS.gene47537.t1 | AT5G20590 | 36.066 | 244 | 142 | 4 | 6 | 235 | 133 | 376 | 1.01e-52 | 178 |
| MS.gene47537.t1 | AT5G19160 | 35.685 | 241 | 141 | 5 | 9 | 235 | 94 | 334 | 1.73e-51 | 174 |
| MS.gene47537.t1 | AT3G62390 | 35.391 | 243 | 145 | 5 | 5 | 235 | 129 | 371 | 1.08e-49 | 171 |
| MS.gene47537.t1 | AT2G40160 | 33.761 | 234 | 143 | 4 | 14 | 235 | 77 | 310 | 2.26e-46 | 160 |
| MS.gene47537.t1 | AT3G06080 | 33.610 | 241 | 146 | 4 | 9 | 235 | 98 | 338 | 5.93e-45 | 157 |
| MS.gene47537.t1 | AT5G06230 | 31.984 | 247 | 148 | 4 | 11 | 237 | 59 | 305 | 1.20e-42 | 150 |
| MS.gene47537.t1 | AT5G64470 | 31.111 | 360 | 195 | 16 | 14 | 333 | 55 | 401 | 4.04e-38 | 140 |
| MS.gene47537.t1 | AT4G25360 | 30.168 | 358 | 206 | 12 | 8 | 327 | 169 | 520 | 1.09e-37 | 141 |
| MS.gene47537.t1 | AT4G25360 | 30.168 | 358 | 206 | 12 | 8 | 327 | 169 | 520 | 1.09e-37 | 141 |
| MS.gene47537.t1 | AT5G64470 | 30.028 | 353 | 202 | 14 | 14 | 333 | 55 | 395 | 1.24e-37 | 139 |
| MS.gene47537.t1 | AT1G70230 | 28.739 | 341 | 212 | 12 | 14 | 331 | 79 | 411 | 1.62e-36 | 136 |
| MS.gene47537.t1 | AT5G64020 | 29.330 | 358 | 207 | 12 | 14 | 331 | 57 | 408 | 2.65e-36 | 135 |
| MS.gene47537.t1 | AT5G51640 | 29.781 | 366 | 210 | 12 | 6 | 331 | 130 | 488 | 3.98e-36 | 136 |
| MS.gene47537.t1 | AT1G01430 | 27.624 | 362 | 223 | 10 | 6 | 332 | 91 | 448 | 5.46e-36 | 135 |
| MS.gene47537.t1 | AT2G37720 | 28.814 | 354 | 202 | 12 | 14 | 331 | 143 | 482 | 1.00e-33 | 129 |
| MS.gene47537.t1 | AT5G20680 | 27.826 | 345 | 217 | 13 | 14 | 331 | 118 | 457 | 1.18e-31 | 124 |
| MS.gene47537.t1 | AT5G20680 | 27.826 | 345 | 217 | 13 | 14 | 331 | 194 | 533 | 2.77e-31 | 123 |
| MS.gene47537.t1 | AT5G20680 | 27.826 | 345 | 217 | 13 | 14 | 331 | 212 | 551 | 3.00e-31 | 123 |
| MS.gene47537.t1 | AT5G20680 | 27.826 | 345 | 217 | 13 | 14 | 331 | 212 | 551 | 3.00e-31 | 123 |
| MS.gene47537.t1 | AT5G20680 | 27.826 | 345 | 217 | 13 | 14 | 331 | 212 | 551 | 3.00e-31 | 123 |
| MS.gene47537.t1 | AT5G20680 | 27.826 | 345 | 217 | 13 | 14 | 331 | 212 | 551 | 3.00e-31 | 123 |
| MS.gene47537.t1 | AT5G15900 | 27.714 | 350 | 218 | 9 | 12 | 331 | 65 | 409 | 1.37e-30 | 120 |
| MS.gene47537.t1 | AT5G15900 | 27.714 | 350 | 218 | 9 | 12 | 331 | 84 | 428 | 1.80e-30 | 120 |
| MS.gene47537.t1 | AT3G28150 | 28.610 | 367 | 201 | 12 | 7 | 331 | 63 | 410 | 4.26e-30 | 119 |
| MS.gene47537.t1 | AT5G15890 | 27.684 | 354 | 225 | 10 | 3 | 331 | 175 | 522 | 1.41e-29 | 119 |
| MS.gene47537.t1 | AT3G02440 | 26.724 | 348 | 219 | 10 | 14 | 331 | 127 | 468 | 1.53e-29 | 118 |
| MS.gene47537.t1 | AT3G02440 | 26.724 | 348 | 219 | 10 | 14 | 331 | 135 | 476 | 1.58e-29 | 118 |
| MS.gene47537.t1 | AT2G14530 | 27.809 | 356 | 214 | 12 | 11 | 331 | 59 | 406 | 9.08e-29 | 115 |
| MS.gene47537.t1 | AT4G01080 | 28.035 | 346 | 213 | 12 | 11 | 327 | 88 | 426 | 2.27e-28 | 114 |
| MS.gene47537.t1 | AT4G11090 | 27.027 | 370 | 216 | 14 | 3 | 332 | 71 | 426 | 2.54e-27 | 111 |
| MS.gene47537.t1 | AT4G23790 | 25.905 | 359 | 231 | 10 | 7 | 332 | 72 | 428 | 8.53e-25 | 104 |
| MS.gene47537.t1 | AT5G64470 | 28.516 | 256 | 147 | 9 | 14 | 243 | 55 | 300 | 1.74e-21 | 93.6 |
| MS.gene47537.t1 | AT5G64470 | 28.516 | 256 | 147 | 9 | 14 | 243 | 55 | 300 | 2.29e-21 | 93.2 |
Find 86 sgRNAs with CRISPR-Local
Find 179 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATAATTGTAATTTGTTCTT+TGG | 0.210727 | 4.3:-25596534 | MS.gene47537:CDS |
| TGAATTATGTCCACCAAATA+TGG | 0.229373 | 4.3:+25594431 | None:intergenic |
| ACTATACCGTACACCATATT+TGG | 0.252473 | 4.3:-25594444 | MS.gene47537:CDS |
| TATTTAAGATACTGATTATC+AGG | 0.276183 | 4.3:+25596420 | None:intergenic |
| ATTGACCACTTGGGCTGGTT+GGG | 0.323556 | 4.3:-25593978 | MS.gene47537:CDS |
| TTGTTCACTACATCATTTGC+AGG | 0.336870 | 4.3:+25593664 | None:intergenic |
| CAATGTCTACTGTCTTCTTC+CGG | 0.356385 | 4.3:-25595963 | MS.gene47537:CDS |
| AAAACTAAACTCTTCTTTCA+AGG | 0.357639 | 4.3:-25593932 | MS.gene47537:CDS |
| GGTGATATTGCGCAGGACTA+TGG | 0.357643 | 4.3:-25594479 | MS.gene47537:intron |
| CGGGGAAGTTGAACCATTAC+CGG | 0.374830 | 4.3:-25593713 | MS.gene47537:CDS |
| AGGAGTATGTTCCAAGTATC+AGG | 0.381319 | 4.3:+25593502 | None:intergenic |
| ATCAGTATCTTAAATACTCT+TGG | 0.387106 | 4.3:-25596413 | MS.gene47537:CDS |
| GGATATGTGGTTCCCGGTAA+TGG | 0.391578 | 4.3:+25593700 | None:intergenic |
| TAATTTGTTCTTTGGAAGTT+GGG | 0.393864 | 4.3:-25596526 | MS.gene47537:CDS |
| CTTGGTAAAGCACATGAATC+AGG | 0.414998 | 4.3:+25596387 | None:intergenic |
| AATGTCTACTGTCTTCTTCC+GGG | 0.421225 | 4.3:-25595962 | MS.gene47537:intron |
| AGTGAGGGACATGGACCGTT+TGG | 0.425551 | 4.3:-25594017 | MS.gene47537:CDS |
| TTTGTGCTTGTGCTCTTGCT+GGG | 0.428652 | 4.3:+25596562 | None:intergenic |
| TCCCCGCTACATGTCTTCTT+CGG | 0.430209 | 4.3:+25593730 | None:intergenic |
| GTAATTTGTTCTTTGGAAGT+TGG | 0.436573 | 4.3:-25596527 | MS.gene47537:CDS |
| GATTGACCACTTGGGCTGGT+TGG | 0.439990 | 4.3:-25593979 | MS.gene47537:CDS |
| GATAAGAAGATAATGTTTGT+AGG | 0.445963 | 4.3:-25596078 | MS.gene47537:CDS |
| TTGAATCCAGAGGGCAGGAT+TGG | 0.450495 | 4.3:-25593759 | MS.gene47537:intron |
| TTACTTACTTATTATGAGTA+GGG | 0.455719 | 4.3:+25593903 | None:intergenic |
| TTTCTGTGGTGTAGGTTCAA+TGG | 0.457357 | 4.3:-25596126 | MS.gene47537:intron |
| TTTATAAGGGATTGACCACT+TGG | 0.465985 | 4.3:-25593988 | MS.gene47537:CDS |
| ACATGATAAGAGCTGCATAT+AGG | 0.466871 | 4.3:+25593482 | None:intergenic |
| ACATCATTTGCAGGAGGTAG+AGG | 0.472593 | 4.3:+25593673 | None:intergenic |
| TGTAGTCATTGGTGCCTACC+AGG | 0.474740 | 4.3:-25593529 | MS.gene47537:CDS |
| TACCAGGACTACCTGATACT+TGG | 0.478567 | 4.3:-25593513 | MS.gene47537:CDS |
| GAAAAGCTTGTAGTGACATT+CGG | 0.481465 | 4.3:+25595997 | None:intergenic |
| TTGTGCTCTTGCTGGGTGCA+TGG | 0.491111 | 4.3:+25596569 | None:intergenic |
| TGGTGTACGGTATAGTTGTA+TGG | 0.491607 | 4.3:+25594451 | None:intergenic |
| GGATCCTTAGTATAGATAGA+AGG | 0.493596 | 4.3:+25593565 | None:intergenic |
| AAGGGATTGACCACTTGGGC+TGG | 0.495484 | 4.3:-25593983 | MS.gene47537:CDS |
| GTTAAAGAACATGAAGAAGC+AGG | 0.504244 | 4.3:-25593638 | MS.gene47537:CDS |
| ATCTATACTAAGGATCCAAC+TGG | 0.504484 | 4.3:-25593559 | MS.gene47537:CDS |
| CTGGCATTGATTGTAGTCAT+TGG | 0.505796 | 4.3:-25593540 | MS.gene47537:CDS |
| ATTACCGGGAACCACATATC+CGG | 0.506278 | 4.3:-25593698 | MS.gene47537:CDS |
| GTCTTGTATGATTCATGCGT+CGG | 0.512224 | 4.3:-25596022 | MS.gene47537:CDS |
| TCTCCTTGAATCCAGAGGGC+AGG | 0.517922 | 4.3:-25593764 | MS.gene47537:intron |
| ACATCCTTCTATCTATACTA+AGG | 0.519367 | 4.3:-25593569 | MS.gene47537:CDS |
| GTTACTTACTTATTATGAGT+AGG | 0.522689 | 4.3:+25593902 | None:intergenic |
| TCTTCAACTCCTGGCACTGG+TGG | 0.524966 | 4.3:-25594334 | MS.gene47537:CDS |
| AGTGTGAATCCACCAGTGCC+AGG | 0.528738 | 4.3:+25594325 | None:intergenic |
| AGGTAGAGGGGCCGGATATG+TGG | 0.530211 | 4.3:+25593687 | None:intergenic |
| TTCCAAGTATCAGGTAGTCC+TGG | 0.535659 | 4.3:+25593511 | None:intergenic |
| TGATCTTCAACTCCTGGCAC+TGG | 0.536421 | 4.3:-25594337 | MS.gene47537:CDS |
| CTATAAAAGCTGGTAAAGCA+TGG | 0.539195 | 4.3:-25594376 | MS.gene47537:CDS |
| CATCATTTGCAGGAGGTAGA+GGG | 0.540823 | 4.3:+25593674 | None:intergenic |
| AACCGAAGAAGACATGTAGC+GGG | 0.541404 | 4.3:-25593732 | MS.gene47537:CDS |
| ACCCTGGACTCTATAAAAGC+TGG | 0.546560 | 4.3:-25594386 | MS.gene47537:CDS |
| GACATAATTCAAGAAGATGT+TGG | 0.547898 | 4.3:-25594419 | MS.gene47537:CDS |
| TTTGCAGGAGGTAGAGGGGC+CGG | 0.548515 | 4.3:+25593679 | None:intergenic |
| ATCAAACTGAGCTTCAACGA+AGG | 0.553255 | 4.3:+25596461 | None:intergenic |
| GGGGCCGGATATGTGGTTCC+CGG | 0.554885 | 4.3:+25593694 | None:intergenic |
| TGACTACAATCAATGCCAGT+TGG | 0.558982 | 4.3:+25593544 | None:intergenic |
| ACATGTTGATCTTCAACTCC+TGG | 0.559302 | 4.3:-25594343 | MS.gene47537:CDS |
| ATACCGTACACCATATTTGG+TGG | 0.560969 | 4.3:-25594441 | MS.gene47537:CDS |
| TACTTACTTATTATGAGTAG+GGG | 0.562023 | 4.3:+25593904 | None:intergenic |
| CCTTATAAAATGCATCCAAA+CGG | 0.562648 | 4.3:+25594002 | None:intergenic |
| ATTCATTGAGTCTAAACATG+TGG | 0.578501 | 4.3:-25596053 | MS.gene47537:CDS |
| TATAAAAGCTGGTAAAGCAT+GGG | 0.581903 | 4.3:-25594375 | MS.gene47537:CDS |
| TGTCCACCAAATATGGTGTA+CGG | 0.595920 | 4.3:+25594438 | None:intergenic |
| CTGATTCATGTGCTTTACCA+AGG | 0.597601 | 4.3:-25596386 | MS.gene47537:intron |
| GGGGAAGTTGAACCATTACC+GGG | 0.597940 | 4.3:-25593712 | MS.gene47537:CDS |
| GTGGTGTAGGTTCAATGGAG+AGG | 0.608923 | 4.3:-25596121 | MS.gene47537:intron |
| TTCATTGAGTCTAAACATGT+GGG | 0.609808 | 4.3:-25596052 | MS.gene47537:CDS |
| TGTTGGTAGAGTGCTTACCC+TGG | 0.618558 | 4.3:-25594402 | MS.gene47537:CDS |
| TCAAACTGAGCTTCAACGAA+GGG | 0.618613 | 4.3:+25596462 | None:intergenic |
| ATCAACCCAACCAGCCCAAG+TGG | 0.622283 | 4.3:+25593973 | None:intergenic |
| GAGATGGTTCTAATCTAGTG+AGG | 0.627215 | 4.3:-25594033 | MS.gene47537:CDS |
| AAGTATCAGGTAGTCCTGGT+AGG | 0.628734 | 4.3:+25593515 | None:intergenic |
| ATCATTTGCAGGAGGTAGAG+GGG | 0.628843 | 4.3:+25593675 | None:intergenic |
| TGGTAAAGCATGGGTAGACA+TGG | 0.629944 | 4.3:-25594366 | MS.gene47537:CDS |
| AGATGGTTCTAATCTAGTGA+GGG | 0.631565 | 4.3:-25594032 | MS.gene47537:CDS |
| TTCACTACATCATTTGCAGG+AGG | 0.631894 | 4.3:+25593667 | None:intergenic |
| TTATAAGGGATTGACCACTT+GGG | 0.640369 | 4.3:-25593987 | MS.gene47537:CDS |
| TGGCACTGGTGGATTCACAC+TGG | 0.642220 | 4.3:-25594323 | MS.gene47537:CDS |
| GAACCGAAGAAGACATGTAG+CGG | 0.645973 | 4.3:-25593733 | MS.gene47537:CDS |
| CGGAAGAAGACAGTAGACAT+TGG | 0.646035 | 4.3:+25595964 | None:intergenic |
| CAGCTTGAAGAATCATAGAG+AGG | 0.652645 | 4.3:+25596486 | None:intergenic |
| TTCTAATCTAGTGAGGGACA+TGG | 0.659068 | 4.3:-25594026 | MS.gene47537:CDS |
| TTCACACTGGAGATTTACGA+GGG | 0.677263 | 4.3:-25594310 | MS.gene47537:intron |
| ATTCACACTGGAGATTTACG+AGG | 0.689675 | 4.3:-25594311 | MS.gene47537:CDS |
| ACCGAAGAAGACATGTAGCG+GGG | 0.713042 | 4.3:-25593731 | MS.gene47537:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCATTGATATTATTATATT+AGG | + | chr4.3:25595493-25595512 | None:intergenic | 10.0% |
| !! | ATTAATTCATTATAACATAT+GGG | - | chr4.3:25595304-25595323 | MS.gene47537:intron | 10.0% |
| !! | TCATTGATATTATTATATTA+GGG | + | chr4.3:25595492-25595511 | None:intergenic | 10.0% |
| !!! | AAAGATTAATTTTTTAAGTT+TGG | + | chr4.3:25594824-25594843 | None:intergenic | 10.0% |
| !! | CATTAATTCATTATAACATA+TGG | - | chr4.3:25595303-25595322 | MS.gene47537:intron | 15.0% |
| !!! | AATAATTGTAATTTGTTCTT+TGG | - | chr4.3:25593513-25593532 | MS.gene47537:CDS | 15.0% |
| !! | ATATTAGGGATATAAATGAT+CGG | + | chr4.3:25595478-25595497 | None:intergenic | 20.0% |
| !! | TATTTGAATAAGACTAGATT+AGG | - | chr4.3:25594400-25594419 | MS.gene47537:CDS | 20.0% |
| !! | TTACATTTGTACTAATCATT+AGG | + | chr4.3:25593891-25593910 | None:intergenic | 20.0% |
| !! | TTACTTACTTATTATGAGTA+GGG | + | chr4.3:25596147-25596166 | None:intergenic | 20.0% |
| !! | TTCAAATATACATTCAATTG+TGG | + | chr4.3:25595802-25595821 | None:intergenic | 20.0% |
| !! | TTGAATGTATATTTGAATTG+AGG | - | chr4.3:25595805-25595824 | MS.gene47537:intron | 20.0% |
| !!! | ACAAAATAAGCTTTTAAAAG+AGG | - | chr4.3:25594764-25594783 | MS.gene47537:intron | 20.0% |
| !!! | AGATTATCTTTAAAAAAGTG+TGG | - | chr4.3:25594625-25594644 | MS.gene47537:intron | 20.0% |
| !!! | GATTATCTTTAAAAAAGTGT+GGG | - | chr4.3:25594626-25594645 | MS.gene47537:intron | 20.0% |
| !!! | GTTTGATCCTTTTAAAATTA+TGG | + | chr4.3:25594802-25594821 | None:intergenic | 20.0% |
| !!! | TATTTAAGATACTGATTATC+AGG | + | chr4.3:25593630-25593649 | None:intergenic | 20.0% |
| !!! | TTCACTCTAATTAAAAGTAT+TGG | + | chr4.3:25596194-25596213 | None:intergenic | 20.0% |
| ! | AAAACTAAACTCTTCTTTCA+AGG | - | chr4.3:25596115-25596134 | MS.gene47537:CDS | 25.0% |
| ! | AAATTTGCATTGTCATTACA+TGG | - | chr4.3:25595161-25595180 | MS.gene47537:intron | 25.0% |
| ! | AATATCTAGATTTAGTGTTG+AGG | + | chr4.3:25594685-25594704 | None:intergenic | 25.0% |
| ! | AATATCTCTATGGAAAATGA+TGG | + | chr4.3:25594384-25594403 | None:intergenic | 25.0% |
| ! | AATTTCGAGCTTAATATCTT+TGG | + | chr4.3:25594338-25594357 | None:intergenic | 25.0% |
| ! | AATTTGCATTGTCATTACAT+GGG | - | chr4.3:25595162-25595181 | MS.gene47537:intron | 25.0% |
| ! | ACTATATTATGCATGTGAAA+CGG | - | chr4.3:25594549-25594568 | MS.gene47537:intron | 25.0% |
| ! | ATATGTGACATATCACAAAA+AGG | + | chr4.3:25593724-25593743 | None:intergenic | 25.0% |
| ! | ATCAGTATCTTAAATACTCT+TGG | - | chr4.3:25593634-25593653 | MS.gene47537:CDS | 25.0% |
| ! | ATGAAATTATGACACTACTT+TGG | - | chr4.3:25595343-25595362 | MS.gene47537:intron | 25.0% |
| ! | CAGTTTGATTGCAAAAAATA+TGG | - | chr4.3:25593600-25593619 | MS.gene47537:CDS | 25.0% |
| ! | CTTGTTACATGTAAAATGAT+AGG | - | chr4.3:25594279-25594298 | MS.gene47537:intron | 25.0% |
| ! | GATAAGAAGATAATGTTTGT+AGG | - | chr4.3:25593969-25593988 | MS.gene47537:CDS | 25.0% |
| ! | GTTACTTACTTATTATGAGT+AGG | + | chr4.3:25596148-25596167 | None:intergenic | 25.0% |
| ! | TACTTACTTATTATGAGTAG+GGG | + | chr4.3:25596146-25596165 | None:intergenic | 25.0% |
| ! | TATACAAACTAACAATACCT+TGG | + | chr4.3:25593681-25593700 | None:intergenic | 25.0% |
| ! | TATGTGACATATCACAAAAA+GGG | + | chr4.3:25593723-25593742 | None:intergenic | 25.0% |
| ! | TGAAATTATGACACTACTTT+GGG | - | chr4.3:25595344-25595363 | MS.gene47537:intron | 25.0% |
| ! | TTGTAAATTGTTGCAATCAT+AGG | + | chr4.3:25594964-25594983 | None:intergenic | 25.0% |
| ! | TTTAAAAGAGGCTATAGATT+GGG | - | chr4.3:25594776-25594795 | MS.gene47537:intron | 25.0% |
| !! | AAAGTGATGAATGTGTTATT+TGG | - | chr4.3:25595963-25595982 | MS.gene47537:CDS | 25.0% |
| !! | ATAAACATGTTTTCCTTTCT+AGG | + | chr4.3:25593807-25593826 | None:intergenic | 25.0% |
| !! | ATGCTTCAATTTTTCTAACT+AGG | - | chr4.3:25594865-25594884 | MS.gene47537:intron | 25.0% |
| !! | GTCTTATTCAAATATCTCTA+TGG | + | chr4.3:25594394-25594413 | None:intergenic | 25.0% |
| !! | TAAACATGTTTTCCTTTCTA+GGG | + | chr4.3:25593806-25593825 | None:intergenic | 25.0% |
| !!! | AAGAAGAGTTTAGTTTTAGT+AGG | + | chr4.3:25596112-25596131 | None:intergenic | 25.0% |
| !!! | AGAAGAGTTTAGTTTTAGTA+GGG | + | chr4.3:25596111-25596130 | None:intergenic | 25.0% |
| !!! | ATAACTACTTTTAGTAAGAG+AGG | + | chr4.3:25594229-25594248 | None:intergenic | 25.0% |
| !!! | ATTTTGTTTGTTTCTTTTGC+GGG | - | chr4.3:25594196-25594215 | MS.gene47537:intron | 25.0% |
| !!! | CATTTTGTTTGTTTCTTTTG+CGG | - | chr4.3:25594195-25594214 | MS.gene47537:intron | 25.0% |
| !!! | TAACTACTTTTAGTAAGAGA+GGG | + | chr4.3:25594228-25594247 | None:intergenic | 25.0% |
| !!! | TAATTTGTTCTTTGGAAGTT+GGG | - | chr4.3:25593521-25593540 | MS.gene47537:CDS | 25.0% |
| !!! | TTTTAAAAGAGGCTATAGAT+TGG | - | chr4.3:25594775-25594794 | MS.gene47537:intron | 25.0% |
| AAACAAAATGATGACACACA+AGG | + | chr4.3:25594185-25594204 | None:intergenic | 30.0% | |
| AAACAAGAACAACTATTACC+CGG | + | chr4.3:25594106-25594125 | None:intergenic | 30.0% | |
| AACCATACTTTGTGTAGATT+AGG | + | chr4.3:25594447-25594466 | None:intergenic | 30.0% | |
| AACCTAATCTACACAAAGTA+TGG | - | chr4.3:25594442-25594461 | MS.gene47537:CDS | 30.0% | |
| AATTTCATGTTTCCCTAGAA+AGG | - | chr4.3:25593791-25593810 | MS.gene47537:intron | 30.0% | |
| ACATCCTTCTATCTATACTA+AGG | - | chr4.3:25596478-25596497 | MS.gene47537:CDS | 30.0% | |
| ATTAGGTTATAGACTCTTGT+CGG | + | chr4.3:25594430-25594449 | None:intergenic | 30.0% | |
| ATTCATTGAGTCTAAACATG+TGG | - | chr4.3:25593994-25594013 | MS.gene47537:CDS | 30.0% | |
| ATTTGAATTGAGGTGATTTG+AGG | - | chr4.3:25595815-25595834 | MS.gene47537:intron | 30.0% | |
| CCTTATAAAATGCATCCAAA+CGG | + | chr4.3:25596048-25596067 | None:intergenic | 30.0% | |
| GACATAATTCAAGAAGATGT+TGG | - | chr4.3:25595628-25595647 | MS.gene47537:intron | 30.0% | |
| GATATTAAGCTCGAAATTGA+AGG | - | chr4.3:25594340-25594359 | MS.gene47537:CDS | 30.0% | |
| GATTGCAACAATTTACAAGT+TGG | - | chr4.3:25594966-25594985 | MS.gene47537:intron | 30.0% | |
| GTAATGAGTAATCATTTCTG+TGG | - | chr4.3:25593907-25593926 | MS.gene47537:intron | 30.0% | |
| GTGTAATCAACATCAATCAT+GGG | - | chr4.3:25595023-25595042 | MS.gene47537:intron | 30.0% | |
| TATAAAAGCTGGTAAAGCAT+GGG | - | chr4.3:25595672-25595691 | MS.gene47537:intron | 30.0% | |
| TATAAATGATCGGATATCCA+CGG | + | chr4.3:25595468-25595487 | None:intergenic | 30.0% | |
| TGAATTATGTCCACCAAATA+TGG | + | chr4.3:25595619-25595638 | None:intergenic | 30.0% | |
| TGTGTAATCAACATCAATCA+TGG | - | chr4.3:25595022-25595041 | MS.gene47537:intron | 30.0% | |
| TTCATTGAGTCTAAACATGT+GGG | - | chr4.3:25593995-25594014 | MS.gene47537:CDS | 30.0% | |
| ! | AGTTCTTCGTAATTTTCTTG+CGG | + | chr4.3:25595399-25595418 | None:intergenic | 30.0% |
| ! | CAGTCAGACTTTGTTTAAAT+AGG | + | chr4.3:25594902-25594921 | None:intergenic | 30.0% |
| ! | CGTTTGGATGCATTTTATAA+GGG | - | chr4.3:25596046-25596065 | MS.gene47537:CDS | 30.0% |
| ! | GATTGGGCCATAATTTTAAA+AGG | - | chr4.3:25594792-25594811 | MS.gene47537:intron | 30.0% |
| !! | GTAATTTGTTCTTTGGAAGT+TGG | - | chr4.3:25593520-25593539 | MS.gene47537:CDS | 30.0% |
| !!! | ATGGAGAGGATTTTTTGAAT+AGG | - | chr4.3:25593940-25593959 | MS.gene47537:CDS | 30.0% |
| ACATGATAAGAGCTGCATAT+AGG | + | chr4.3:25596568-25596587 | None:intergenic | 35.0% | |
| ACTATACCGTACACCATATT+TGG | - | chr4.3:25595603-25595622 | MS.gene47537:intron | 35.0% | |
| AGTAATCATTTCTGTGGTGT+AGG | - | chr4.3:25593913-25593932 | MS.gene47537:CDS | 35.0% | |
| ATCTATACTAAGGATCCAAC+TGG | - | chr4.3:25596488-25596507 | MS.gene47537:CDS | 35.0% | |
| CTACTATATATCCATATCCG+TGG | - | chr4.3:25595448-25595467 | MS.gene47537:intron | 35.0% | |
| CTATAAAAGCTGGTAAAGCA+TGG | - | chr4.3:25595671-25595690 | MS.gene47537:intron | 35.0% | |
| GAAAAGCTTGTAGTGACATT+CGG | + | chr4.3:25594053-25594072 | None:intergenic | 35.0% | |
| GGATCCTTAGTATAGATAGA+AGG | + | chr4.3:25596485-25596504 | None:intergenic | 35.0% | |
| GTTAAAGAACATGAAGAAGC+AGG | - | chr4.3:25596409-25596428 | MS.gene47537:CDS | 35.0% | |
| TTAGGTTATAGACTCTTGTC+GGG | + | chr4.3:25594429-25594448 | None:intergenic | 35.0% | |
| TTATAAGGGATTGACCACTT+GGG | - | chr4.3:25596060-25596079 | MS.gene47537:CDS | 35.0% | |
| TTGTTCACTACATCATTTGC+AGG | + | chr4.3:25596386-25596405 | None:intergenic | 35.0% | |
| TTTATAAGGGATTGACCACT+TGG | - | chr4.3:25596059-25596078 | MS.gene47537:CDS | 35.0% | |
| ! | ATGTCACTACAAGCTTTTCT+AGG | - | chr4.3:25594054-25594073 | MS.gene47537:intron | 35.0% |
| ! | CACTACCACAGTTTCATTTT+GGG | + | chr4.3:25595542-25595561 | None:intergenic | 35.0% |
| ! | CCGTTTGGATGCATTTTATA+AGG | - | chr4.3:25596045-25596064 | MS.gene47537:CDS | 35.0% |
| ! | CGTGACTTCTACTTTGAAAA+AGG | + | chr4.3:25594722-25594741 | None:intergenic | 35.0% |
| ! | TCACTACCACAGTTTCATTT+TGG | + | chr4.3:25595543-25595562 | None:intergenic | 35.0% |
| !! | AGATGGTTCTAATCTAGTGA+GGG | - | chr4.3:25596015-25596034 | MS.gene47537:CDS | 35.0% |
| !! | TTATTTGGCTTGCTTCATTC+AGG | - | chr4.3:25595978-25595997 | MS.gene47537:CDS | 35.0% |
| !!! | GAGAGGATTTTTTGAATAGG+TGG | - | chr4.3:25593943-25593962 | MS.gene47537:CDS | 35.0% |
| !!! | GGATTTTTTGAATAGGTGGA+AGG | - | chr4.3:25593947-25593966 | MS.gene47537:CDS | 35.0% |
| AACCACCCAAAATGAAACTG+TGG | - | chr4.3:25595534-25595553 | MS.gene47537:intron | 40.0% | |
| AATGTCTACTGTCTTCTTCC+GGG | - | chr4.3:25594085-25594104 | MS.gene47537:intron | 40.0% | |
| ACATGTTGATCTTCAACTCC+TGG | - | chr4.3:25595704-25595723 | MS.gene47537:intron | 40.0% | |
| ATACCGTACACCATATTTGG+TGG | - | chr4.3:25595606-25595625 | MS.gene47537:intron | 40.0% | |
| ATCAAACTGAGCTTCAACGA+AGG | + | chr4.3:25593589-25593608 | None:intergenic | 40.0% | |
| ATTCACACTGGAGATTTACG+AGG | - | chr4.3:25595736-25595755 | MS.gene47537:intron | 40.0% | |
| CAATGTCTACTGTCTTCTTC+CGG | - | chr4.3:25594084-25594103 | MS.gene47537:intron | 40.0% | |
| CAGCTTGAAGAATCATAGAG+AGG | + | chr4.3:25593564-25593583 | None:intergenic | 40.0% | |
| CTGATTCATGTGCTTTACCA+AGG | - | chr4.3:25593661-25593680 | MS.gene47537:CDS | 40.0% | |
| CTTGGTAAAGCACATGAATC+AGG | + | chr4.3:25593663-25593682 | None:intergenic | 40.0% | |
| GAGGTGATTTGAGGAAACTA+CGG | - | chr4.3:25595824-25595843 | MS.gene47537:intron | 40.0% | |
| GTCTTGTATGATTCATGCGT+CGG | - | chr4.3:25594025-25594044 | MS.gene47537:CDS | 40.0% | |
| TCAAACTGAGCTTCAACGAA+GGG | + | chr4.3:25593588-25593607 | None:intergenic | 40.0% | |
| TGACTACAATCAATGCCAGT+TGG | + | chr4.3:25596506-25596525 | None:intergenic | 40.0% | |
| TGGTGTACGGTATAGTTGTA+TGG | + | chr4.3:25595599-25595618 | None:intergenic | 40.0% | |
| TGTCCACCAAATATGGTGTA+CGG | + | chr4.3:25595612-25595631 | None:intergenic | 40.0% | |
| TGTCTTAGACTCACACACAT+AGG | - | chr4.3:25594128-25594147 | MS.gene47537:intron | 40.0% | |
| TTCACACTGGAGATTTACGA+GGG | - | chr4.3:25595737-25595756 | MS.gene47537:intron | 40.0% | |
| TTCACTACATCATTTGCAGG+AGG | + | chr4.3:25596383-25596402 | None:intergenic | 40.0% | |
| TTCTAATCTAGTGAGGGACA+TGG | - | chr4.3:25596021-25596040 | MS.gene47537:CDS | 40.0% | |
| TTTCTGTGGTGTAGGTTCAA+TGG | - | chr4.3:25593921-25593940 | MS.gene47537:CDS | 40.0% | |
| ! | ACCAGCTTTTATAGAGTCCA+GGG | + | chr4.3:25595665-25595684 | None:intergenic | 40.0% |
| ! | AGGAGTATGTTCCAAGTATC+AGG | + | chr4.3:25596548-25596567 | None:intergenic | 40.0% |
| ! | AGGTGGGATTTTATCAGAGA+TGG | - | chr4.3:25595998-25596017 | MS.gene47537:CDS | 40.0% |
| ! | GAAACTGTGGTAGTGATACT+TGG | - | chr4.3:25595547-25595566 | MS.gene47537:intron | 40.0% |
| ! | TACCACAGTTTCATTTTGGG+TGG | + | chr4.3:25595539-25595558 | None:intergenic | 40.0% |
| ! | TACCAGCTTTTATAGAGTCC+AGG | + | chr4.3:25595666-25595685 | None:intergenic | 40.0% |
| !! | CTGGCATTGATTGTAGTCAT+TGG | - | chr4.3:25596507-25596526 | MS.gene47537:CDS | 40.0% |
| !! | GAGATGGTTCTAATCTAGTG+AGG | - | chr4.3:25596014-25596033 | MS.gene47537:CDS | 40.0% |
| AACCGAAGAAGACATGTAGC+GGG | - | chr4.3:25596315-25596334 | MS.gene47537:intron | 45.0% | |
| AAGTATCAGGTAGTCCTGGT+AGG | + | chr4.3:25596535-25596554 | None:intergenic | 45.0% | |
| ACATCATTTGCAGGAGGTAG+AGG | + | chr4.3:25596377-25596396 | None:intergenic | 45.0% | |
| ACCCTGGACTCTATAAAAGC+TGG | - | chr4.3:25595661-25595680 | MS.gene47537:intron | 45.0% | |
| ATCATTTGCAGGAGGTAGAG+GGG | + | chr4.3:25596375-25596394 | None:intergenic | 45.0% | |
| ATTACCGGGAACCACATATC+CGG | - | chr4.3:25596349-25596368 | MS.gene47537:intron | 45.0% | |
| CATCATTTGCAGGAGGTAGA+GGG | + | chr4.3:25596376-25596395 | None:intergenic | 45.0% | |
| CCTTTCTCCTTGAATCCAGA+GGG | - | chr4.3:25596279-25596298 | MS.gene47537:intron | 45.0% | |
| CGGAAGAAGACAGTAGACAT+TGG | + | chr4.3:25594086-25594105 | None:intergenic | 45.0% | |
| GAACCGAAGAAGACATGTAG+CGG | - | chr4.3:25596314-25596333 | MS.gene47537:intron | 45.0% | |
| TACCAGGACTACCTGATACT+TGG | - | chr4.3:25596534-25596553 | MS.gene47537:CDS | 45.0% | |
| TATTATCACCCTCAAGCGAG+AGG | - | chr4.3:25594931-25594950 | MS.gene47537:intron | 45.0% | |
| TCCTTTCTCCTTGAATCCAG+AGG | - | chr4.3:25596278-25596297 | MS.gene47537:intron | 45.0% | |
| TCTCGCTTGAGGGTGATAAT+AGG | + | chr4.3:25594932-25594951 | None:intergenic | 45.0% | |
| TGATCGGATATCCACGGATA+TGG | + | chr4.3:25595462-25595481 | None:intergenic | 45.0% | |
| TGGTAAAGCATGGGTAGACA+TGG | - | chr4.3:25595681-25595700 | MS.gene47537:intron | 45.0% | |
| TTCCAAGTATCAGGTAGTCC+TGG | + | chr4.3:25596539-25596558 | None:intergenic | 45.0% | |
| TTTGTGCTTGTGCTCTTGCT+GGG | + | chr4.3:25593488-25593507 | None:intergenic | 45.0% | |
| ! | GATACTTGGTGATATTGCGC+AGG | - | chr4.3:25595561-25595580 | MS.gene47537:intron | 45.0% |
| ! | TTTTGTGCTTGTGCTCTTGC+TGG | + | chr4.3:25593489-25593508 | None:intergenic | 45.0% |
| !! | TTGGCTTGCTTCATTCAGGT+GGG | - | chr4.3:25595982-25596001 | MS.gene47537:CDS | 45.0% |
| !! | TTTGGCTTGCTTCATTCAGG+TGG | - | chr4.3:25595981-25596000 | MS.gene47537:CDS | 45.0% |
| !! | ATATTATATAATAATATCAA+AGG | - | chr4.3:25594599-25594618 | MS.gene47537:intron | 5.0% |
| AATCCTGCCCTCTGGATTCA+AGG | + | chr4.3:25596289-25596308 | None:intergenic | 50.0% | |
| ACCGAAGAAGACATGTAGCG+GGG | - | chr4.3:25596316-25596335 | MS.gene47537:intron | 50.0% | |
| CCCTCTGGATTCAAGGAGAA+AGG | + | chr4.3:25596282-25596301 | None:intergenic | 50.0% | |
| CGGGGAAGTTGAACCATTAC+CGG | - | chr4.3:25596334-25596353 | MS.gene47537:intron | 50.0% | |
| GGATATGTGGTTCCCGGTAA+TGG | + | chr4.3:25596350-25596369 | None:intergenic | 50.0% | |
| GGGGAAGTTGAACCATTACC+GGG | - | chr4.3:25596335-25596354 | MS.gene47537:intron | 50.0% | |
| GGTGATATTGCGCAGGACTA+TGG | - | chr4.3:25595568-25595587 | MS.gene47537:intron | 50.0% | |
| GTGGTGTAGGTTCAATGGAG+AGG | - | chr4.3:25593926-25593945 | MS.gene47537:CDS | 50.0% | |
| GTTGACATCCTCTCGCTTGA+GGG | + | chr4.3:25594942-25594961 | None:intergenic | 50.0% | |
| TCCCCGCTACATGTCTTCTT+CGG | + | chr4.3:25596320-25596339 | None:intergenic | 50.0% | |
| TGATCTTCAACTCCTGGCAC+TGG | - | chr4.3:25595710-25595729 | MS.gene47537:intron | 50.0% | |
| TTCATTCCAATCCTGCCCTC+TGG | + | chr4.3:25596297-25596316 | None:intergenic | 50.0% | |
| TTGAATCCAGAGGGCAGGAT+TGG | - | chr4.3:25596288-25596307 | MS.gene47537:intron | 50.0% | |
| ! | TGTAGTCATTGGTGCCTACC+AGG | - | chr4.3:25596518-25596537 | MS.gene47537:CDS | 50.0% |
| ! | TGTTGGTAGAGTGCTTACCC+TGG | - | chr4.3:25595645-25595664 | MS.gene47537:intron | 50.0% |
| !! | ATTGACCACTTGGGCTGGTT+GGG | - | chr4.3:25596069-25596088 | MS.gene47537:CDS | 50.0% |
| AAGGGATTGACCACTTGGGC+TGG | - | chr4.3:25596064-25596083 | MS.gene47537:CDS | 55.0% | |
| AGTGAGGGACATGGACCGTT+TGG | - | chr4.3:25596030-25596049 | MS.gene47537:CDS | 55.0% | |
| AGTGTGAATCCACCAGTGCC+AGG | + | chr4.3:25595725-25595744 | None:intergenic | 55.0% | |
| ATCAACCCAACCAGCCCAAG+TGG | + | chr4.3:25596077-25596096 | None:intergenic | 55.0% | |
| GGTTGACATCCTCTCGCTTG+AGG | + | chr4.3:25594943-25594962 | None:intergenic | 55.0% | |
| TCTCCTTGAATCCAGAGGGC+AGG | - | chr4.3:25596283-25596302 | MS.gene47537:intron | 55.0% | |
| ! | TCTTCAACTCCTGGCACTGG+TGG | - | chr4.3:25595713-25595732 | MS.gene47537:intron | 55.0% |
| !! | GATTGACCACTTGGGCTGGT+TGG | - | chr4.3:25596068-25596087 | MS.gene47537:CDS | 55.0% |
| !! | TGGCACTGGTGGATTCACAC+TGG | - | chr4.3:25595724-25595743 | MS.gene47537:intron | 55.0% |
| AGGTAGAGGGGCCGGATATG+TGG | + | chr4.3:25596363-25596382 | None:intergenic | 60.0% | |
| TTTGCAGGAGGTAGAGGGGC+CGG | + | chr4.3:25596371-25596390 | None:intergenic | 60.0% | |
| GGGGCCGGATATGTGGTTCC+CGG | + | chr4.3:25596356-25596375 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 25593480 | 25596589 | 25593480 | ID=MS.gene47537 |
| chr4.3 | mRNA | 25593480 | 25596589 | 25593480 | ID=MS.gene47537.t1;Parent=MS.gene47537 |
| chr4.3 | exon | 25596387 | 25596589 | 25596387 | ID=MS.gene47537.t1.exon1;Parent=MS.gene47537.t1 |
| chr4.3 | CDS | 25596387 | 25596589 | 25596387 | ID=cds.MS.gene47537.t1;Parent=MS.gene47537.t1 |
| chr4.3 | exon | 25595963 | 25596134 | 25595963 | ID=MS.gene47537.t1.exon2;Parent=MS.gene47537.t1 |
| chr4.3 | CDS | 25595963 | 25596134 | 25595963 | ID=cds.MS.gene47537.t1;Parent=MS.gene47537.t1 |
| chr4.3 | exon | 25594311 | 25594486 | 25594311 | ID=MS.gene47537.t1.exon3;Parent=MS.gene47537.t1 |
| chr4.3 | CDS | 25594311 | 25594486 | 25594311 | ID=cds.MS.gene47537.t1;Parent=MS.gene47537.t1 |
| chr4.3 | exon | 25593911 | 25594069 | 25593911 | ID=MS.gene47537.t1.exon4;Parent=MS.gene47537.t1 |
| chr4.3 | CDS | 25593911 | 25594069 | 25593911 | ID=cds.MS.gene47537.t1;Parent=MS.gene47537.t1 |
| chr4.3 | exon | 25593480 | 25593771 | 25593480 | ID=MS.gene47537.t1.exon5;Parent=MS.gene47537.t1 |
| chr4.3 | CDS | 25593480 | 25593771 | 25593480 | ID=cds.MS.gene47537.t1;Parent=MS.gene47537.t1 |
| Gene Sequence |
| Protein sequence |
