Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73821.t1 | XP_003607565.1 | 97.3 | 365 | 6 | 1 | 1 | 361 | 1 | 365 | 2.30E-216 | 761.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73821.t1 | Q9SIN2 | 65.1 | 321 | 111 | 1 | 40 | 359 | 44 | 364 | 8.9e-137 | 488.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73821.t1 | G7JV22 | 97.3 | 365 | 6 | 1 | 1 | 361 | 1 | 365 | 1.6e-216 | 761.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049807 | MS.gene73821 | 0.806122 | 9.59E-50 | -1.69E-46 |
MS.gene053143 | MS.gene73821 | 0.821365 | 4.20E-53 | -1.69E-46 |
MS.gene054585 | MS.gene73821 | 0.804411 | 2.19E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene73821 | MS.gene008707 | PPI |
MS.gene73821 | MS.gene039341 | PPI |
MS.gene029396 | MS.gene73821 | PPI |
MS.gene73821 | MS.gene76296 | PPI |
MS.gene73821 | MS.gene39564 | PPI |
MS.gene47537 | MS.gene73821 | PPI |
MS.gene73821 | MS.gene94488 | PPI |
MS.gene73821 | MS.gene39565 | PPI |
MS.gene73821 | MS.gene26591 | PPI |
MS.gene73821 | MS.gene82618 | PPI |
MS.gene73821 | MS.gene008708 | PPI |
MS.gene73821 | MS.gene47540 | PPI |
MS.gene73821 | MS.gene065125 | PPI |
MS.gene73821 | MS.gene039339 | PPI |
MS.gene73821 | MS.gene027587 | PPI |
MS.gene22010 | MS.gene73821 | PPI |
MS.gene73821 | MS.gene72456 | PPI |
MS.gene73821 | MS.gene72457 | PPI |
MS.gene070181 | MS.gene73821 | PPI |
MS.gene97826 | MS.gene73821 | PPI |
MS.gene027586 | MS.gene73821 | PPI |
MS.gene73821 | MS.gene71840 | PPI |
MS.gene73821 | MS.gene97825 | PPI |
MS.gene26592 | MS.gene73821 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73821.t1 | MTR_4g079700 | 97.260 | 365 | 6 | 1 | 1 | 361 | 1 | 365 | 0.0 | 746 |
MS.gene73821.t1 | MTR_2g091175 | 75.499 | 351 | 78 | 1 | 17 | 359 | 16 | 366 | 0.0 | 565 |
MS.gene73821.t1 | MTR_2g015720 | 59.322 | 354 | 139 | 4 | 10 | 360 | 8 | 359 | 3.32e-153 | 435 |
MS.gene73821.t1 | MTR_4g087730 | 59.748 | 318 | 127 | 1 | 43 | 359 | 45 | 362 | 9.38e-142 | 406 |
MS.gene73821.t1 | MTR_4g088030 | 58.255 | 321 | 133 | 1 | 40 | 359 | 30 | 350 | 3.45e-139 | 399 |
MS.gene73821.t1 | MTR_3g049330 | 55.625 | 320 | 139 | 2 | 43 | 359 | 31 | 350 | 2.34e-134 | 387 |
MS.gene73821.t1 | MTR_5g034810 | 51.811 | 359 | 158 | 4 | 4 | 359 | 6 | 352 | 2.38e-131 | 380 |
MS.gene73821.t1 | MTR_2g073510 | 55.975 | 318 | 136 | 3 | 43 | 356 | 33 | 350 | 6.54e-131 | 379 |
MS.gene73821.t1 | MTR_3g021060 | 51.652 | 333 | 154 | 2 | 30 | 361 | 39 | 365 | 2.32e-129 | 375 |
MS.gene73821.t1 | MTR_3g035830 | 50.301 | 332 | 158 | 2 | 31 | 361 | 25 | 350 | 1.91e-125 | 364 |
MS.gene73821.t1 | MTR_3g021090 | 50.307 | 326 | 155 | 2 | 31 | 355 | 25 | 344 | 1.49e-121 | 357 |
MS.gene73821.t1 | MTR_5g071350 | 46.499 | 357 | 166 | 5 | 28 | 359 | 43 | 399 | 7.04e-117 | 345 |
MS.gene73821.t1 | MTR_3g464570 | 49.254 | 335 | 153 | 4 | 42 | 359 | 42 | 376 | 3.61e-116 | 342 |
MS.gene73821.t1 | MTR_2g073500 | 47.095 | 327 | 153 | 6 | 43 | 359 | 29 | 345 | 5.88e-105 | 312 |
MS.gene73821.t1 | MTR_1g111010 | 45.427 | 328 | 156 | 10 | 40 | 359 | 29 | 341 | 1.85e-90 | 275 |
MS.gene73821.t1 | MTR_0136s0010 | 38.859 | 368 | 198 | 6 | 16 | 359 | 145 | 509 | 6.01e-89 | 277 |
MS.gene73821.t1 | MTR_1g050448 | 39.881 | 336 | 180 | 7 | 38 | 359 | 48 | 375 | 1.41e-87 | 269 |
MS.gene73821.t1 | MTR_7g093450 | 39.589 | 341 | 181 | 6 | 43 | 359 | 248 | 587 | 1.97e-86 | 273 |
MS.gene73821.t1 | MTR_3g464570 | 47.601 | 271 | 125 | 4 | 106 | 359 | 2 | 272 | 2.24e-84 | 257 |
MS.gene73821.t1 | MTR_1g112210 | 36.842 | 361 | 194 | 10 | 23 | 359 | 32 | 382 | 1.92e-83 | 258 |
MS.gene73821.t1 | MTR_1g112210 | 37.396 | 361 | 179 | 12 | 23 | 359 | 32 | 369 | 1.12e-82 | 256 |
MS.gene73821.t1 | MTR_4g126950 | 33.151 | 365 | 220 | 7 | 17 | 359 | 84 | 446 | 4.93e-80 | 252 |
MS.gene73821.t1 | MTR_5g059400 | 36.888 | 347 | 193 | 6 | 38 | 359 | 170 | 515 | 7.08e-80 | 254 |
MS.gene73821.t1 | MTR_1g116130 | 36.888 | 347 | 193 | 6 | 38 | 359 | 170 | 515 | 7.08e-80 | 254 |
MS.gene73821.t1 | MTR_4g121560 | 37.135 | 342 | 190 | 7 | 42 | 359 | 113 | 453 | 7.79e-80 | 252 |
MS.gene73821.t1 | MTR_5g082880 | 38.040 | 347 | 185 | 9 | 43 | 359 | 165 | 511 | 3.82e-79 | 251 |
MS.gene73821.t1 | MTR_3g070900 | 38.372 | 344 | 185 | 9 | 43 | 359 | 106 | 449 | 6.08e-79 | 249 |
MS.gene73821.t1 | MTR_7g109550 | 36.905 | 336 | 188 | 8 | 43 | 359 | 137 | 467 | 1.55e-78 | 249 |
MS.gene73821.t1 | MTR_3g071650 | 37.318 | 343 | 188 | 9 | 43 | 359 | 89 | 430 | 2.54e-75 | 239 |
MS.gene73821.t1 | MTR_5g033800 | 32.584 | 356 | 216 | 5 | 27 | 359 | 129 | 483 | 4.05e-75 | 240 |
MS.gene73821.t1 | MTR_5g083260 | 36.182 | 351 | 199 | 7 | 34 | 359 | 74 | 424 | 3.37e-74 | 236 |
MS.gene73821.t1 | MTR_8g069790 | 34.870 | 347 | 202 | 6 | 36 | 359 | 171 | 516 | 3.82e-74 | 239 |
MS.gene73821.t1 | MTR_4g016940 | 34.795 | 342 | 198 | 7 | 43 | 359 | 86 | 427 | 2.40e-73 | 234 |
MS.gene73821.t1 | MTR_8g463790 | 36.000 | 350 | 188 | 10 | 39 | 359 | 67 | 409 | 4.01e-73 | 233 |
MS.gene73821.t1 | MTR_1g058380 | 36.193 | 373 | 204 | 10 | 12 | 359 | 31 | 394 | 7.07e-71 | 227 |
MS.gene73821.t1 | MTR_7g094750 | 35.756 | 344 | 192 | 9 | 43 | 359 | 91 | 432 | 1.11e-68 | 223 |
MS.gene73821.t1 | MTR_3g090120 | 37.609 | 343 | 189 | 8 | 37 | 359 | 122 | 459 | 1.15e-68 | 223 |
MS.gene73821.t1 | MTR_4g014440 | 31.854 | 383 | 231 | 9 | 8 | 361 | 28 | 409 | 1.92e-68 | 221 |
MS.gene73821.t1 | MTR_2g022560 | 34.985 | 343 | 197 | 7 | 40 | 357 | 94 | 435 | 3.32e-68 | 221 |
MS.gene73821.t1 | MTR_7g070060 | 31.620 | 389 | 232 | 11 | 1 | 359 | 25 | 409 | 3.19e-67 | 218 |
MS.gene73821.t1 | MTR_4g014430 | 34.593 | 344 | 199 | 8 | 40 | 359 | 105 | 446 | 3.72e-66 | 216 |
MS.gene73821.t1 | MTR_7g068920 | 35.965 | 342 | 194 | 7 | 43 | 359 | 80 | 421 | 6.91e-66 | 214 |
MS.gene73821.t1 | MTR_8g093530 | 32.344 | 337 | 198 | 9 | 43 | 359 | 90 | 416 | 7.91e-58 | 194 |
MS.gene73821.t1 | MTR_5g033800 | 30.952 | 252 | 162 | 3 | 27 | 266 | 129 | 380 | 1.38e-47 | 166 |
MS.gene73821.t1 | MTR_7g070060 | 30.909 | 275 | 175 | 7 | 1 | 264 | 25 | 295 | 1.95e-46 | 160 |
MS.gene73821.t1 | MTR_5g069320 | 36.111 | 288 | 110 | 9 | 90 | 352 | 148 | 386 | 2.34e-46 | 162 |
MS.gene73821.t1 | MTR_7g094750 | 34.454 | 238 | 142 | 4 | 43 | 266 | 91 | 328 | 2.66e-45 | 158 |
MS.gene73821.t1 | MTR_7g070060 | 29.693 | 293 | 178 | 7 | 95 | 359 | 15 | 307 | 2.18e-40 | 145 |
MS.gene73821.t1 | MTR_4g092830 | 29.395 | 347 | 205 | 13 | 43 | 355 | 48 | 388 | 7.68e-38 | 140 |
MS.gene73821.t1 | MTR_6g016240 | 30.352 | 369 | 218 | 12 | 27 | 360 | 53 | 417 | 4.54e-37 | 138 |
MS.gene73821.t1 | MTR_6g061710 | 27.596 | 366 | 210 | 11 | 37 | 359 | 161 | 514 | 8.88e-36 | 136 |
MS.gene73821.t1 | MTR_8g093870 | 29.752 | 363 | 216 | 15 | 28 | 359 | 118 | 472 | 4.06e-35 | 134 |
MS.gene73821.t1 | MTR_1g076690 | 29.577 | 355 | 197 | 14 | 43 | 355 | 223 | 566 | 7.46e-35 | 134 |
MS.gene73821.t1 | MTR_5g035080 | 30.899 | 356 | 197 | 17 | 43 | 359 | 75 | 420 | 1.28e-33 | 129 |
MS.gene73821.t1 | MTR_6g016880 | 27.500 | 400 | 239 | 13 | 1 | 359 | 30 | 419 | 3.45e-32 | 125 |
MS.gene73821.t1 | MTR_5g035090 | 29.143 | 350 | 210 | 13 | 43 | 359 | 83 | 427 | 1.25e-31 | 124 |
MS.gene73821.t1 | MTR_5g035150 | 29.429 | 350 | 213 | 12 | 42 | 359 | 84 | 431 | 2.13e-31 | 123 |
MS.gene73821.t1 | MTR_7g019120 | 26.171 | 363 | 227 | 8 | 30 | 359 | 66 | 420 | 2.18e-30 | 120 |
MS.gene73821.t1 | MTR_6g016875 | 26.781 | 351 | 217 | 10 | 43 | 359 | 64 | 408 | 3.27e-30 | 120 |
MS.gene73821.t1 | MTR_7g033230 | 28.457 | 376 | 228 | 14 | 18 | 359 | 241 | 609 | 1.38e-29 | 120 |
MS.gene73821.t1 | MTR_4g125060 | 26.722 | 363 | 223 | 13 | 27 | 359 | 122 | 471 | 1.58e-29 | 118 |
MS.gene73821.t1 | MTR_4g125060 | 27.011 | 348 | 217 | 12 | 42 | 359 | 170 | 510 | 2.42e-29 | 118 |
MS.gene73821.t1 | MTR_7g033230 | 28.457 | 376 | 228 | 14 | 18 | 359 | 311 | 679 | 2.87e-29 | 119 |
MS.gene73821.t1 | MTR_4g125060 | 26.648 | 364 | 224 | 13 | 26 | 359 | 189 | 539 | 3.50e-29 | 118 |
MS.gene73821.t1 | MTR_8g104970 | 27.920 | 351 | 218 | 10 | 43 | 361 | 120 | 467 | 4.41e-29 | 117 |
MS.gene73821.t1 | MTR_5g035070 | 28.045 | 353 | 214 | 11 | 42 | 359 | 86 | 433 | 1.35e-28 | 115 |
MS.gene73821.t1 | MTR_2g016060 | 27.066 | 351 | 224 | 9 | 36 | 355 | 47 | 396 | 2.63e-28 | 114 |
MS.gene73821.t1 | MTR_8g027900 | 27.198 | 364 | 199 | 15 | 43 | 359 | 211 | 555 | 3.48e-27 | 112 |
MS.gene73821.t1 | MTR_3g021150 | 42.982 | 114 | 64 | 1 | 227 | 339 | 1 | 114 | 1.71e-26 | 102 |
MS.gene73821.t1 | MTR_3g109840 | 29.143 | 350 | 200 | 15 | 43 | 355 | 73 | 411 | 6.70e-26 | 107 |
MS.gene73821.t1 | MTR_6g007777 | 27.479 | 353 | 211 | 13 | 42 | 359 | 115 | 457 | 1.34e-25 | 107 |
MS.gene73821.t1 | MTR_8g099300 | 24.930 | 357 | 215 | 11 | 40 | 355 | 71 | 415 | 9.14e-24 | 102 |
MS.gene73821.t1 | MTR_7g019140 | 40.196 | 102 | 61 | 0 | 30 | 131 | 66 | 167 | 2.84e-19 | 84.3 |
MS.gene73821.t1 | MTR_5g035120 | 41.758 | 91 | 53 | 0 | 43 | 133 | 75 | 165 | 1.99e-16 | 76.6 |
MS.gene73821.t1 | MTR_3g021080 | 33.000 | 100 | 47 | 2 | 261 | 359 | 99 | 179 | 1.67e-12 | 65.9 |
MS.gene73821.t1 | MTR_2g022580 | 30.252 | 119 | 69 | 3 | 103 | 207 | 2 | 120 | 7.26e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73821.t1 | AT2G42570 | 63.554 | 332 | 120 | 1 | 29 | 359 | 33 | 364 | 8.74e-166 | 468 |
MS.gene73821.t1 | AT2G31110 | 58.659 | 358 | 144 | 3 | 6 | 360 | 7 | 363 | 1.13e-162 | 459 |
MS.gene73821.t1 | AT1G29050 | 61.180 | 322 | 124 | 1 | 40 | 360 | 58 | 379 | 1.11e-154 | 440 |
MS.gene73821.t1 | AT2G34070 | 60.938 | 320 | 123 | 2 | 43 | 360 | 65 | 384 | 4.20e-149 | 426 |
MS.gene73821.t1 | AT3G14850 | 56.698 | 321 | 135 | 3 | 40 | 356 | 31 | 351 | 6.81e-133 | 384 |
MS.gene73821.t1 | AT1G78710 | 50.147 | 341 | 163 | 5 | 23 | 359 | 19 | 356 | 6.33e-124 | 361 |
MS.gene73821.t1 | AT2G30900 | 50.462 | 325 | 155 | 4 | 43 | 361 | 43 | 367 | 1.81e-119 | 350 |
MS.gene73821.t1 | AT2G34070 | 60.800 | 250 | 96 | 2 | 113 | 360 | 1 | 250 | 7.13e-113 | 329 |
MS.gene73821.t1 | AT5G58600 | 48.214 | 336 | 156 | 5 | 42 | 359 | 65 | 400 | 1.71e-109 | 326 |
MS.gene73821.t1 | AT2G31110 | 56.693 | 254 | 107 | 2 | 6 | 257 | 7 | 259 | 6.94e-106 | 312 |
MS.gene73821.t1 | AT2G30010 | 42.328 | 378 | 194 | 5 | 6 | 359 | 19 | 396 | 2.42e-103 | 310 |
MS.gene73821.t1 | AT2G30010 | 42.328 | 378 | 194 | 5 | 6 | 359 | 62 | 439 | 5.41e-103 | 310 |
MS.gene73821.t1 | AT2G31110 | 63.462 | 208 | 75 | 1 | 154 | 360 | 8 | 215 | 4.48e-102 | 300 |
MS.gene73821.t1 | AT3G14850 | 55.645 | 248 | 106 | 3 | 113 | 356 | 1 | 248 | 1.68e-95 | 285 |
MS.gene73821.t1 | AT1G78710 | 42.609 | 345 | 138 | 6 | 19 | 359 | 8 | 296 | 1.98e-92 | 279 |
MS.gene73821.t1 | AT5G06700 | 41.096 | 365 | 190 | 6 | 19 | 359 | 231 | 594 | 6.27e-91 | 285 |
MS.gene73821.t1 | AT3G12060 | 39.474 | 342 | 182 | 5 | 42 | 359 | 195 | 535 | 5.12e-86 | 270 |
MS.gene73821.t1 | AT3G54260 | 39.940 | 333 | 175 | 6 | 43 | 359 | 51 | 374 | 1.67e-85 | 264 |
MS.gene73821.t1 | AT2G30900 | 50.000 | 236 | 110 | 3 | 43 | 276 | 43 | 272 | 5.81e-83 | 253 |
MS.gene73821.t1 | AT3G62390 | 38.166 | 338 | 188 | 6 | 43 | 361 | 138 | 473 | 1.04e-81 | 257 |
MS.gene73821.t1 | AT5G49340 | 36.676 | 349 | 186 | 6 | 41 | 359 | 98 | 441 | 9.58e-79 | 249 |
MS.gene73821.t1 | AT5G58600 | 50.667 | 225 | 109 | 2 | 42 | 264 | 65 | 289 | 1.10e-78 | 243 |
MS.gene73821.t1 | AT5G20590 | 35.882 | 340 | 194 | 7 | 43 | 359 | 141 | 479 | 4.98e-78 | 248 |
MS.gene73821.t1 | AT3G55990 | 35.792 | 366 | 206 | 9 | 21 | 359 | 120 | 483 | 1.65e-77 | 246 |
MS.gene73821.t1 | AT1G73140 | 37.209 | 344 | 186 | 10 | 42 | 359 | 66 | 405 | 5.03e-75 | 238 |
MS.gene73821.t1 | AT1G60790 | 36.047 | 344 | 192 | 7 | 43 | 359 | 190 | 532 | 7.40e-75 | 241 |
MS.gene73821.t1 | AT2G40160 | 35.429 | 350 | 194 | 9 | 43 | 361 | 77 | 425 | 1.46e-74 | 238 |
MS.gene73821.t1 | AT2G40160 | 35.465 | 344 | 190 | 9 | 43 | 355 | 77 | 419 | 4.52e-74 | 236 |
MS.gene73821.t1 | AT2G40150 | 34.571 | 350 | 196 | 8 | 43 | 359 | 71 | 420 | 2.47e-73 | 234 |
MS.gene73821.t1 | AT3G11030 | 35.694 | 353 | 199 | 9 | 34 | 359 | 97 | 448 | 8.41e-72 | 231 |
MS.gene73821.t1 | AT5G01620 | 34.571 | 350 | 202 | 8 | 35 | 359 | 102 | 449 | 2.56e-71 | 229 |
MS.gene73821.t1 | AT5G01620 | 34.571 | 350 | 202 | 8 | 35 | 359 | 102 | 449 | 2.56e-71 | 229 |
MS.gene73821.t1 | AT5G01620 | 34.571 | 350 | 202 | 8 | 35 | 359 | 110 | 457 | 3.65e-71 | 229 |
MS.gene73821.t1 | AT2G40320 | 34.521 | 365 | 214 | 8 | 20 | 359 | 58 | 422 | 9.40e-71 | 227 |
MS.gene73821.t1 | AT5G01360 | 34.985 | 343 | 197 | 8 | 43 | 359 | 36 | 378 | 3.80e-70 | 224 |
MS.gene73821.t1 | AT2G38320 | 32.216 | 388 | 233 | 9 | 1 | 359 | 18 | 404 | 3.90e-70 | 225 |
MS.gene73821.t1 | AT5G19160 | 34.109 | 387 | 203 | 10 | 19 | 357 | 60 | 442 | 3.97e-70 | 227 |
MS.gene73821.t1 | AT5G01360 | 34.985 | 343 | 197 | 8 | 43 | 359 | 92 | 434 | 1.74e-69 | 224 |
MS.gene73821.t1 | AT3G06080 | 35.380 | 342 | 193 | 8 | 43 | 357 | 103 | 443 | 1.96e-68 | 223 |
MS.gene73821.t1 | AT1G48880 | 35.310 | 371 | 215 | 9 | 1 | 355 | 74 | 435 | 9.92e-67 | 217 |
MS.gene73821.t1 | AT5G06230 | 36.286 | 350 | 192 | 10 | 39 | 359 | 17 | 364 | 1.37e-66 | 215 |
MS.gene73821.t1 | AT5G06230 | 36.286 | 350 | 192 | 10 | 39 | 359 | 58 | 405 | 3.68e-66 | 215 |
MS.gene73821.t1 | AT3G11570 | 36.533 | 323 | 182 | 6 | 59 | 359 | 98 | 419 | 3.87e-65 | 213 |
MS.gene73821.t1 | AT2G38320 | 31.761 | 318 | 189 | 7 | 70 | 359 | 4 | 321 | 2.41e-56 | 187 |
MS.gene73821.t1 | AT3G62390 | 36.709 | 237 | 138 | 3 | 43 | 267 | 138 | 374 | 1.94e-55 | 187 |
MS.gene73821.t1 | AT5G20590 | 35.294 | 238 | 140 | 5 | 43 | 266 | 141 | 378 | 1.25e-51 | 176 |
MS.gene73821.t1 | AT2G40160 | 36.752 | 234 | 136 | 5 | 43 | 264 | 77 | 310 | 1.57e-51 | 174 |
MS.gene73821.t1 | AT5G19160 | 33.935 | 277 | 154 | 5 | 19 | 266 | 60 | 336 | 1.21e-49 | 170 |
MS.gene73821.t1 | AT3G06080 | 35.714 | 238 | 139 | 4 | 43 | 266 | 103 | 340 | 4.30e-47 | 163 |
MS.gene73821.t1 | AT5G06230 | 35.484 | 248 | 140 | 5 | 39 | 266 | 58 | 305 | 4.00e-45 | 157 |
MS.gene73821.t1 | AT2G14530 | 29.973 | 367 | 215 | 10 | 28 | 359 | 47 | 406 | 1.26e-41 | 150 |
MS.gene73821.t1 | AT5G64470 | 29.799 | 349 | 212 | 12 | 36 | 355 | 46 | 390 | 8.93e-40 | 145 |
MS.gene73821.t1 | AT1G70230 | 29.412 | 340 | 210 | 10 | 43 | 359 | 79 | 411 | 2.34e-38 | 142 |
MS.gene73821.t1 | AT5G64470 | 29.775 | 356 | 209 | 14 | 36 | 355 | 46 | 396 | 5.69e-38 | 140 |
MS.gene73821.t1 | AT5G51640 | 27.249 | 389 | 227 | 12 | 16 | 359 | 111 | 488 | 5.57e-36 | 137 |
MS.gene73821.t1 | AT4G25360 | 27.632 | 380 | 222 | 13 | 20 | 355 | 150 | 520 | 2.48e-35 | 135 |
MS.gene73821.t1 | AT4G25360 | 27.632 | 380 | 222 | 13 | 20 | 355 | 150 | 520 | 2.48e-35 | 135 |
MS.gene73821.t1 | AT5G64020 | 29.444 | 360 | 205 | 15 | 42 | 359 | 56 | 408 | 1.11e-34 | 132 |
MS.gene73821.t1 | AT2G37720 | 29.086 | 361 | 193 | 15 | 42 | 359 | 142 | 482 | 2.16e-32 | 127 |
MS.gene73821.t1 | AT3G28150 | 27.835 | 388 | 243 | 13 | 5 | 361 | 31 | 412 | 4.76e-32 | 125 |
MS.gene73821.t1 | AT5G15900 | 25.862 | 406 | 242 | 14 | 1 | 359 | 16 | 409 | 9.32e-32 | 124 |
MS.gene73821.t1 | AT5G15900 | 25.862 | 406 | 242 | 14 | 1 | 359 | 35 | 428 | 1.22e-31 | 124 |
MS.gene73821.t1 | AT1G01430 | 25.798 | 376 | 235 | 11 | 22 | 359 | 78 | 447 | 6.81e-31 | 122 |
MS.gene73821.t1 | AT5G20680 | 27.855 | 359 | 198 | 15 | 43 | 359 | 118 | 457 | 6.90e-30 | 119 |
MS.gene73821.t1 | AT5G20680 | 27.577 | 359 | 199 | 14 | 43 | 359 | 212 | 551 | 1.12e-29 | 120 |
MS.gene73821.t1 | AT5G20680 | 27.577 | 359 | 199 | 14 | 43 | 359 | 212 | 551 | 1.12e-29 | 120 |
MS.gene73821.t1 | AT5G20680 | 27.577 | 359 | 199 | 14 | 43 | 359 | 212 | 551 | 1.12e-29 | 120 |
MS.gene73821.t1 | AT5G20680 | 27.577 | 359 | 199 | 14 | 43 | 359 | 212 | 551 | 1.12e-29 | 120 |
MS.gene73821.t1 | AT5G20680 | 27.577 | 359 | 199 | 14 | 43 | 359 | 194 | 533 | 1.19e-29 | 119 |
MS.gene73821.t1 | AT3G02440 | 24.928 | 349 | 223 | 10 | 43 | 359 | 135 | 476 | 9.01e-29 | 116 |
MS.gene73821.t1 | AT3G02440 | 24.928 | 349 | 223 | 10 | 43 | 359 | 127 | 468 | 1.13e-28 | 116 |
MS.gene73821.t1 | AT5G15890 | 27.114 | 343 | 209 | 12 | 43 | 355 | 187 | 518 | 4.28e-27 | 112 |
MS.gene73821.t1 | AT4G01080 | 25.429 | 350 | 216 | 12 | 40 | 355 | 88 | 426 | 1.57e-24 | 104 |
MS.gene73821.t1 | AT5G64470 | 29.213 | 267 | 164 | 10 | 36 | 281 | 46 | 308 | 4.16e-24 | 101 |
MS.gene73821.t1 | AT5G64470 | 29.213 | 267 | 164 | 10 | 36 | 281 | 46 | 308 | 6.01e-24 | 100 |
MS.gene73821.t1 | AT4G11090 | 24.866 | 374 | 223 | 13 | 30 | 359 | 66 | 425 | 6.56e-24 | 102 |
MS.gene73821.t1 | AT4G23790 | 24.929 | 353 | 225 | 11 | 43 | 359 | 79 | 427 | 6.69e-22 | 96.7 |
Find 78 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGAATATGCTTCTAGAATT+TGG | 0.113418 | 4.4:-31473282 | None:intergenic |
CAAACCAAAGTCTTCTTCTT+AGG | 0.227258 | 4.4:+31475312 | MS.gene73821:CDS |
ATGGCATCCACCTATATTTC+TGG | 0.239401 | 4.4:-31473046 | None:intergenic |
TGTAGCCACTGGTGTCTTCC+TGG | 0.277598 | 4.4:+31475687 | MS.gene73821:CDS |
AGTGAGAAAGTGCCATATTT+TGG | 0.279871 | 4.4:+31475507 | MS.gene73821:CDS |
CTTGGCATGTTACAAGAAAA+TGG | 0.318130 | 4.4:-31473065 | None:intergenic |
AGAAGCTGATTCCAAGTATC+AGG | 0.322948 | 4.4:-31475714 | None:intergenic |
GGGTATTTCAAACCAAAATA+TGG | 0.332479 | 4.4:-31475519 | None:intergenic |
TGACAGATGGGATTATATTC+AGG | 0.367092 | 4.4:+31475191 | MS.gene73821:intron |
TTCCTGGACTTCCTGATACT+TGG | 0.369841 | 4.4:+31475703 | MS.gene73821:CDS |
TCACTCATGCATGACTTTGT+TGG | 0.371357 | 4.4:-31475489 | None:intergenic |
ATAAGCTTTACCAGAAATAT+AGG | 0.384304 | 4.4:+31473036 | MS.gene73821:CDS |
GTCACATCTAAGAAATAAAC+TGG | 0.411760 | 4.4:-31475600 | None:intergenic |
GTAACTTGTTCCGTGGCAAA+TGG | 0.412805 | 4.4:+31472925 | MS.gene73821:CDS |
AAGAAGACTTTGGTTTGTGC+TGG | 0.422122 | 4.4:-31475306 | None:intergenic |
GGGAAGAAGATTATGTTTGT+TGG | 0.424391 | 4.4:+31473201 | MS.gene73821:CDS |
CAAGCCATTGGTGTCCCTCC+AGG | 0.427641 | 4.4:-31475540 | None:intergenic |
TTTGAAGTCAGTAACATTGC+AGG | 0.428295 | 4.4:+31472897 | MS.gene73821:CDS |
AACTTTCTGAAGGGTAATAG+AGG | 0.429506 | 4.4:+31473180 | MS.gene73821:CDS |
TCTATACCGCACAGCATACT+TGG | 0.433438 | 4.4:+31474945 | MS.gene73821:CDS |
TGAAGGTTATAGTGGTGTTA+TGG | 0.434673 | 4.4:+31475656 | MS.gene73821:CDS |
TATCTCTTCAGTCACATTTG+AGG | 0.440220 | 4.4:+31473317 | MS.gene73821:CDS |
GTCCTTCTTTATCATGATCA+AGG | 0.442671 | 4.4:-31474972 | None:intergenic |
TCTACAAAGGACTACAAACT+TGG | 0.453097 | 4.4:+31475256 | MS.gene73821:CDS |
TACAAGCTAACGAATTGAAC+TGG | 0.455479 | 4.4:-31473242 | None:intergenic |
AAATTGTTTCGCAGGTTCAA+TGG | 0.460433 | 4.4:+31473153 | MS.gene73821:intron |
AATTCCTAAGAAGAAGACTT+TGG | 0.470232 | 4.4:-31475316 | None:intergenic |
AATGTTACTGACTTCAAAGT+TGG | 0.485805 | 4.4:-31472892 | None:intergenic |
CAATCAAGAGTGGTGAAGCT+TGG | 0.495413 | 4.4:+31475013 | MS.gene73821:CDS |
TAACTTGTTCCGTGGCAAAT+GGG | 0.495722 | 4.4:+31472926 | MS.gene73821:CDS |
AGGGACACCAATGGCTTGGA+TGG | 0.502776 | 4.4:+31475545 | MS.gene73821:CDS |
TCTTCAACACGTGGCATTGG+TGG | 0.505890 | 4.4:+31475055 | MS.gene73821:CDS |
GCACATCCTGAAGGTTATAG+TGG | 0.507023 | 4.4:+31475648 | MS.gene73821:CDS |
CAATGGTTTGAACTTTCTGA+AGG | 0.510925 | 4.4:+31473170 | MS.gene73821:CDS |
ATAACACCACTATAACCTTC+AGG | 0.516042 | 4.4:-31475654 | None:intergenic |
TTGGTTTGAAATACCCTGGA+GGG | 0.527368 | 4.4:+31475526 | MS.gene73821:CDS |
TGGTGAAGCTTGGAGAGGAA+TGG | 0.527447 | 4.4:+31475023 | MS.gene73821:CDS |
CTGGAGGGACACCAATGGCT+TGG | 0.529625 | 4.4:+31475541 | MS.gene73821:CDS |
TTCACCACCATCCAAGCCAT+TGG | 0.532920 | 4.4:-31475552 | None:intergenic |
TCTATGAAAGGACAAGTTGA+AGG | 0.533615 | 4.4:-31472978 | None:intergenic |
ATAACTTACTGGTAATGTAC+AGG | 0.538647 | 4.4:-31475342 | None:intergenic |
TGATCTTCAACACGTGGCAT+TGG | 0.541024 | 4.4:+31475052 | MS.gene73821:CDS |
TCATGCATGACTTTGTTGGT+TGG | 0.542003 | 4.4:-31475485 | None:intergenic |
CAAGTTGAAGGGTTATAGAG+AGG | 0.546976 | 4.4:-31472966 | None:intergenic |
TTCCAAGTATCAGGAAGTCC+AGG | 0.548161 | 4.4:-31475705 | None:intergenic |
TAGAATTTGGTACAGCAGCA+TGG | 0.554694 | 4.4:-31473269 | None:intergenic |
TTCCCACCAAACAAAATCAG+AGG | 0.559578 | 4.4:+31472845 | MS.gene73821:CDS |
GACCTTGATCATGATAAAGA+AGG | 0.566545 | 4.4:+31474970 | MS.gene73821:CDS |
GACTACAAACTTGGGCTAGG+TGG | 0.570817 | 4.4:+31475265 | MS.gene73821:CDS |
ACTACAAACTTGGGCTAGGT+GGG | 0.578379 | 4.4:+31475266 | MS.gene73821:CDS |
CGGTTGTGAACTTCCAGTGT+GGG | 0.580735 | 4.4:-31475079 | None:intergenic |
AAGCCATTGGTGTCCCTCCA+GGG | 0.581911 | 4.4:-31475539 | None:intergenic |
CTACAAAGGACTACAAACTT+GGG | 0.582833 | 4.4:+31475257 | MS.gene73821:CDS |
TGGCATTGGTGGACCCACAC+TGG | 0.584418 | 4.4:+31475066 | MS.gene73821:CDS |
ATACCGCACAGCATACTTGG+TGG | 0.586879 | 4.4:+31474948 | MS.gene73821:CDS |
TTGAACTGTGGATCTATGAA+AGG | 0.589879 | 4.4:-31472990 | None:intergenic |
GGCTTGGATGGTGGTGAACA+AGG | 0.591402 | 4.4:+31475557 | MS.gene73821:CDS |
AATGGTTTGAACTTTCTGAA+GGG | 0.597673 | 4.4:+31473171 | MS.gene73821:CDS |
AGAAAAGATGCACATCCTGA+AGG | 0.597997 | 4.4:+31475639 | MS.gene73821:CDS |
AAGGACTACAAACTTGGGCT+AGG | 0.603384 | 4.4:+31475262 | MS.gene73821:CDS |
GACACCAATGGCTTGGATGG+TGG | 0.610440 | 4.4:+31475548 | MS.gene73821:CDS |
CAGTTCAATTGTCAGAAACA+TGG | 0.617132 | 4.4:+31473005 | MS.gene73821:CDS |
ACTTTCTGAAGGGTAATAGA+GGG | 0.617389 | 4.4:+31473181 | MS.gene73821:CDS |
TGGCAACTGATTGTAGCCAC+TGG | 0.618075 | 4.4:+31475676 | MS.gene73821:CDS |
CTATGAAAGGACAAGTTGAA+GGG | 0.623253 | 4.4:-31472977 | None:intergenic |
TGGTGAACAAGGTGTTGAGA+AGG | 0.632793 | 4.4:+31475568 | MS.gene73821:CDS |
ACGGTTGTGAACTTCCAGTG+TGG | 0.643283 | 4.4:-31475080 | None:intergenic |
ATACCCTGGAGGGACACCAA+TGG | 0.646199 | 4.4:+31475536 | MS.gene73821:CDS |
AGCTTTACCAGAAATATAGG+TGG | 0.648575 | 4.4:+31473039 | MS.gene73821:CDS |
AAGCTTGACTCAATCAAGAG+TGG | 0.662012 | 4.4:+31475003 | MS.gene73821:CDS |
CGTCGTAAACCCATTTGCCA+CGG | 0.673142 | 4.4:-31472935 | None:intergenic |
AAGAGTGGTGAAGCTTGGAG+AGG | 0.679537 | 4.4:+31475018 | MS.gene73821:CDS |
GGAACATGTAACTTGTTCCG+TGG | 0.681608 | 4.4:+31472918 | MS.gene73821:CDS |
TGTTTCTGACAATTGAACTG+TGG | 0.711026 | 4.4:-31473002 | None:intergenic |
TTTGGTTTGAAATACCCTGG+AGG | 0.715369 | 4.4:+31475525 | MS.gene73821:CDS |
GAAGTCCAGGAAGACACCAG+TGG | 0.726350 | 4.4:-31475692 | None:intergenic |
ATGTGTTGATCTTCAACACG+TGG | 0.756788 | 4.4:+31475046 | MS.gene73821:CDS |
GGTCCACCAAGTATGCTGTG+CGG | 0.774384 | 4.4:-31474951 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAAAAAATATTAGGATTTTT+TGG | - | chr4.4:31474486-31474505 | None:intergenic | 10.0% |
!!! | TTTTTTATTTTTATTTTGAG+AGG | - | chr4.4:31474216-31474235 | None:intergenic | 10.0% |
!! | AAACAATTAAAAAACACTAT+TGG | - | chr4.4:31473563-31473582 | None:intergenic | 15.0% |
!!! | ATTTTATTTATGATGAAAAG+TGG | + | chr4.4:31474081-31474100 | MS.gene73821:intron | 15.0% |
!!! | TAAATGTTATTGTTGTTTTT+AGG | + | chr4.4:31474903-31474922 | MS.gene73821:intron | 15.0% |
!!! | TTAAGCTCTAAAAATATATA+TGG | + | chr4.4:31475434-31475453 | MS.gene73821:intron | 15.0% |
!!! | TTATTTTTTTGTTTAACATC+CGG | + | chr4.4:31474316-31474335 | MS.gene73821:intron | 15.0% |
!! | AACATTGAACATTAAGATAA+CGG | + | chr4.4:31474796-31474815 | MS.gene73821:intron | 20.0% |
!! | ATCAACAAAGAGAAAATAAA+CGG | + | chr4.4:31473948-31473967 | MS.gene73821:intron | 20.0% |
!! | ATTAGATATTCATAACTTAC+TGG | - | chr4.4:31475356-31475375 | None:intergenic | 20.0% |
!! | TAAAATACGTAATGAATTTG+TGG | - | chr4.4:31474067-31474086 | None:intergenic | 20.0% |
!! | TTAAATACCAACAAAACTTT+AGG | - | chr4.4:31474364-31474383 | None:intergenic | 20.0% |
!! | TTAGCATCATTAATTAATCA+TGG | - | chr4.4:31475147-31475166 | None:intergenic | 20.0% |
!! | TTCAATGTAATTACAAATGT+CGG | - | chr4.4:31473428-31473447 | None:intergenic | 20.0% |
!!! | TTGTTTGTTTTAATGATGTT+AGG | + | chr4.4:31473585-31473604 | MS.gene73821:intron | 20.0% |
!!! | TTTATTTGACAACGTTTTAT+AGG | - | chr4.4:31474277-31474296 | None:intergenic | 20.0% |
!!! | TTTTAAAACAATGAAAGTGA+AGG | - | chr4.4:31473528-31473547 | None:intergenic | 20.0% |
!!! | TTTTGAAAATGAAGTAACAA+GGG | - | chr4.4:31474119-31474138 | None:intergenic | 20.0% |
!!! | TTTTTTGGAATCCTAAAATT+CGG | - | chr4.4:31474471-31474490 | None:intergenic | 20.0% |
! | AAGCAATTAATCAGATTTAC+TGG | - | chr4.4:31474668-31474687 | None:intergenic | 25.0% |
! | AATGTGACTGGTATAATTAT+TGG | + | chr4.4:31474733-31474752 | MS.gene73821:intron | 25.0% |
! | AATTAATCAGATTTACTGGT+AGG | - | chr4.4:31474664-31474683 | None:intergenic | 25.0% |
! | ATAAGCTTTACCAGAAATAT+AGG | + | chr4.4:31473036-31473055 | MS.gene73821:CDS | 25.0% |
! | CAATAAAGAATTGATGTGAT+TGG | + | chr4.4:31473775-31473794 | MS.gene73821:intron | 25.0% |
! | CTAAAAATATATATGGTGTG+TGG | + | chr4.4:31475441-31475460 | MS.gene73821:intron | 25.0% |
! | GTTTGAGAAACAATAAAGAA+TGG | - | chr4.4:31474011-31474030 | None:intergenic | 25.0% |
! | TAAAAAATTGCCACAAAAGT+GGG | - | chr4.4:31473883-31473902 | None:intergenic | 25.0% |
! | TTGAAAAATTCATGACAGAT+GGG | + | chr4.4:31475179-31475198 | MS.gene73821:intron | 25.0% |
!! | CGAAGTGTTAATATAAAAAC+CGG | - | chr4.4:31474338-31474357 | None:intergenic | 25.0% |
!! | GTTTTATAGGATAAAGTTCA+AGG | - | chr4.4:31474264-31474283 | None:intergenic | 25.0% |
!! | TAAAATCCTCTGATTTTGTT+TGG | - | chr4.4:31472854-31472873 | None:intergenic | 25.0% |
!!! | ATTGTTGTTTTTAGGAGTAT+GGG | + | chr4.4:31474911-31474930 | MS.gene73821:intron | 25.0% |
!!! | CTACTCTTTATTTTTTTGAG+AGG | + | chr4.4:31473979-31473998 | MS.gene73821:intron | 25.0% |
!!! | GTTTTGAAAATGAAGTAACA+AGG | - | chr4.4:31474120-31474139 | None:intergenic | 25.0% |
!!! | TATTGTTGTTTTTAGGAGTA+TGG | + | chr4.4:31474910-31474929 | MS.gene73821:intron | 25.0% |
!!! | TGTTCTTTTGTTGGTTTTTA+TGG | + | chr4.4:31473111-31473130 | MS.gene73821:intron | 25.0% |
AAAGAATTGATGTGATTGGT+TGG | + | chr4.4:31473779-31473798 | MS.gene73821:intron | 30.0% | |
AATGGTTTGAACTTTCTGAA+GGG | + | chr4.4:31473171-31473190 | MS.gene73821:CDS | 30.0% | |
AATTCCTAAGAAGAAGACTT+TGG | - | chr4.4:31475319-31475338 | None:intergenic | 30.0% | |
ACCAACAAAAGAACACAAAA+TGG | - | chr4.4:31473106-31473125 | None:intergenic | 30.0% | |
ATATATGGTGTGTGGTATTA+GGG | + | chr4.4:31475449-31475468 | MS.gene73821:intron | 30.0% | |
ATGGGACCATGAAAAAAAAA+GGG | - | chr4.4:31474578-31474597 | None:intergenic | 30.0% | |
CACAAAAGTCATAAAAGTGA+AGG | - | chr4.4:31473358-31473377 | None:intergenic | 30.0% | |
CTAGACAAGAAAATGAACTT+TGG | + | chr4.4:31474189-31474208 | MS.gene73821:intron | 30.0% | |
CTTGAAAAATTCATGACAGA+TGG | + | chr4.4:31475178-31475197 | MS.gene73821:intron | 30.0% | |
GGGTATTTCAAACCAAAATA+TGG | - | chr4.4:31475522-31475541 | None:intergenic | 30.0% | |
GTAAAAAATTGCCACAAAAG+TGG | - | chr4.4:31473884-31473903 | None:intergenic | 30.0% | |
GTCACATCTAAGAAATAAAC+TGG | - | chr4.4:31475603-31475622 | None:intergenic | 30.0% | |
TATATATGGTGTGTGGTATT+AGG | + | chr4.4:31475448-31475467 | MS.gene73821:intron | 30.0% | |
TGGTAACAAAAATTGTACCT+TGG | - | chr4.4:31473086-31473105 | None:intergenic | 30.0% | |
! | ACCATTTTGTGTTCTTTTGT+TGG | + | chr4.4:31473102-31473121 | MS.gene73821:intron | 30.0% |
! | ATAACTTACTGGTAATGTAC+AGG | - | chr4.4:31475345-31475364 | None:intergenic | 30.0% |
! | TGAGTAATCAACCGAATTTT+AGG | + | chr4.4:31474457-31474476 | MS.gene73821:intron | 30.0% |
! | TGCTATTTATACAATGTGAC+TGG | + | chr4.4:31474721-31474740 | MS.gene73821:intron | 30.0% |
! | TTCATTACATTTGCTGAAAC+AGG | - | chr4.4:31474604-31474623 | None:intergenic | 30.0% |
!! | AATGTTACTGACTTCAAAGT+TGG | - | chr4.4:31472895-31472914 | None:intergenic | 30.0% |
!! | CTGAATATGCTTCTAGAATT+TGG | - | chr4.4:31473285-31473304 | None:intergenic | 30.0% |
!!! | ACGAAACCCTTTTTTTTTCA+TGG | + | chr4.4:31474569-31474588 | MS.gene73821:intron | 30.0% |
!!! | CTTTTTTATTAGAACAGACG+TGG | + | chr4.4:31474030-31474049 | MS.gene73821:intron | 30.0% |
!!! | TATTTTGGTTTGAAATACCC+TGG | + | chr4.4:31475522-31475541 | MS.gene73821:CDS | 30.0% |
AAATTGTTTCGCAGGTTCAA+TGG | + | chr4.4:31473153-31473172 | MS.gene73821:intron | 35.0% | |
AATGTGAGAGAATGATCCTA+CGG | - | chr4.4:31475102-31475121 | None:intergenic | 35.0% | |
AGCTTTACCAGAAATATAGG+TGG | + | chr4.4:31473039-31473058 | MS.gene73821:CDS | 35.0% | |
ATAACACCACTATAACCTTC+AGG | - | chr4.4:31475657-31475676 | None:intergenic | 35.0% | |
CAAACCAAAGTCTTCTTCTT+AGG | + | chr4.4:31475312-31475331 | MS.gene73821:CDS | 35.0% | |
CAATGGTTTGAACTTTCTGA+AGG | + | chr4.4:31473170-31473189 | MS.gene73821:CDS | 35.0% | |
CAGTTCAATTGTCAGAAACA+TGG | + | chr4.4:31473005-31473024 | MS.gene73821:CDS | 35.0% | |
CATGGGACCATGAAAAAAAA+AGG | - | chr4.4:31474579-31474598 | None:intergenic | 35.0% | |
CATTATGTGCATGTTTGAGT+TGG | - | chr4.4:31473906-31473925 | None:intergenic | 35.0% | |
CTACAAAGGACTACAAACTT+GGG | + | chr4.4:31475257-31475276 | MS.gene73821:CDS | 35.0% | |
CTTGGCATGTTACAAGAAAA+TGG | - | chr4.4:31473068-31473087 | None:intergenic | 35.0% | |
GACCTTGATCATGATAAAGA+AGG | + | chr4.4:31474970-31474989 | MS.gene73821:CDS | 35.0% | |
GGGAAGAAGATTATGTTTGT+TGG | + | chr4.4:31473201-31473220 | MS.gene73821:CDS | 35.0% | |
GTCCTTCTTTATCATGATCA+AGG | - | chr4.4:31474975-31474994 | None:intergenic | 35.0% | |
GTTGTGATAAATTGTTTCGC+AGG | + | chr4.4:31473145-31473164 | MS.gene73821:intron | 35.0% | |
TAATCAGATTTACTGGTAGG+TGG | - | chr4.4:31474661-31474680 | None:intergenic | 35.0% | |
TACAAGCTAACGAATTGAAC+TGG | - | chr4.4:31473245-31473264 | None:intergenic | 35.0% | |
TATATGGTGTGTGGTATTAG+GGG | + | chr4.4:31475450-31475469 | MS.gene73821:intron | 35.0% | |
TATCTCTTCAGTCACATTTG+AGG | + | chr4.4:31473317-31473336 | MS.gene73821:CDS | 35.0% | |
TATTATCTGTGTTAGCGTGT+CGG | + | chr4.4:31473467-31473486 | MS.gene73821:intron | 35.0% | |
TCTACAAAGGACTACAAACT+TGG | + | chr4.4:31475256-31475275 | MS.gene73821:CDS | 35.0% | |
TGACAGATGGGATTATATTC+AGG | + | chr4.4:31475191-31475210 | MS.gene73821:intron | 35.0% | |
TGGTCATAAGTGTATCAAAC+TGG | + | chr4.4:31474753-31474772 | MS.gene73821:intron | 35.0% | |
TTGAACTGTGGATCTATGAA+AGG | - | chr4.4:31472993-31473012 | None:intergenic | 35.0% | |
TTTGAGTATTACAAGCCTTG+AGG | + | chr4.4:31473705-31473724 | MS.gene73821:intron | 35.0% | |
! | AACTTTCTGAAGGGTAATAG+AGG | + | chr4.4:31473180-31473199 | MS.gene73821:CDS | 35.0% |
! | ACTTTCTGAAGGGTAATAGA+GGG | + | chr4.4:31473181-31473200 | MS.gene73821:CDS | 35.0% |
! | CATTTTCTTGTAACATGCCA+AGG | + | chr4.4:31473066-31473085 | MS.gene73821:CDS | 35.0% |
! | CTATGAAAGGACAAGTTGAA+GGG | - | chr4.4:31472980-31472999 | None:intergenic | 35.0% |
! | GACTTTTGTGTAATGAAGCA+CGG | + | chr4.4:31473368-31473387 | MS.gene73821:intron | 35.0% |
! | TCTATGAAAGGACAAGTTGA+AGG | - | chr4.4:31472981-31473000 | None:intergenic | 35.0% |
! | TGAAGGTTATAGTGGTGTTA+TGG | + | chr4.4:31475656-31475675 | MS.gene73821:CDS | 35.0% |
! | TGTTTCTGACAATTGAACTG+TGG | - | chr4.4:31473005-31473024 | None:intergenic | 35.0% |
! | TTTGAAGTCAGTAACATTGC+AGG | + | chr4.4:31472897-31472916 | MS.gene73821:CDS | 35.0% |
!! | AATCCTCTGATTTTGTTTGG+TGG | - | chr4.4:31472851-31472870 | None:intergenic | 35.0% |
!! | ATCCTCTGATTTTGTTTGGT+GGG | - | chr4.4:31472850-31472869 | None:intergenic | 35.0% |
!! | CGTTTTGTTGCATTCTACAA+AGG | + | chr4.4:31475243-31475262 | MS.gene73821:CDS | 35.0% |
!! | TATACTTAGACCCACTTTTG+TGG | + | chr4.4:31473870-31473889 | MS.gene73821:intron | 35.0% |
!! | TTCGACACCTAAAGTTTTGT+TGG | + | chr4.4:31474354-31474373 | MS.gene73821:intron | 35.0% |
!!! | AGTGAGAAAGTGCCATATTT+TGG | + | chr4.4:31475507-31475526 | MS.gene73821:CDS | 35.0% |
!!! | CTTGTCTAGTTCTTTTGCAT+AGG | - | chr4.4:31474178-31474197 | None:intergenic | 35.0% |
!!! | CTTTTTTTTTCATGGTCCCA+TGG | + | chr4.4:31474577-31474596 | MS.gene73821:intron | 35.0% |
AAGCTTGACTCAATCAAGAG+TGG | + | chr4.4:31475003-31475022 | MS.gene73821:CDS | 40.0% | |
ACCATCATGTTCTAACCTCA+AGG | - | chr4.4:31473723-31473742 | None:intergenic | 40.0% | |
AGAAAAGATGCACATCCTGA+AGG | + | chr4.4:31475639-31475658 | MS.gene73821:CDS | 40.0% | |
ATATGGTGTGTGGTATTAGG+GGG | + | chr4.4:31475451-31475470 | MS.gene73821:intron | 40.0% | |
ATGGCATCCACCTATATTTC+TGG | - | chr4.4:31473049-31473068 | None:intergenic | 40.0% | |
TAGAATTTGGTACAGCAGCA+TGG | - | chr4.4:31473272-31473291 | None:intergenic | 40.0% | |
TCACTCATGCATGACTTTGT+TGG | - | chr4.4:31475492-31475511 | None:intergenic | 40.0% | |
TCATGCATGACTTTGTTGGT+TGG | - | chr4.4:31475488-31475507 | None:intergenic | 40.0% | |
TTCCCACCAAACAAAATCAG+AGG | + | chr4.4:31472845-31472864 | MS.gene73821:CDS | 40.0% | |
! | AGAAGCTGATTCCAAGTATC+AGG | - | chr4.4:31475717-31475736 | None:intergenic | 40.0% |
! | ATGTGTTGATCTTCAACACG+TGG | + | chr4.4:31475046-31475065 | MS.gene73821:CDS | 40.0% |
! | ATTTGCTGAAACAGGACCAT+GGG | - | chr4.4:31474596-31474615 | None:intergenic | 40.0% |
! | CAAGTTGAAGGGTTATAGAG+AGG | - | chr4.4:31472969-31472988 | None:intergenic | 40.0% |
! | GAATTGATGTGATTGGTTGG+AGG | + | chr4.4:31473782-31473801 | MS.gene73821:intron | 40.0% |
! | TCTTCAGTCACATTTGAGGT+TGG | + | chr4.4:31473321-31473340 | MS.gene73821:intron | 40.0% |
! | TGGAGGCTTTCTTTTGTGTT+GGG | + | chr4.4:31473799-31473818 | MS.gene73821:intron | 40.0% |
! | TTGGAGGCTTTCTTTTGTGT+TGG | + | chr4.4:31473798-31473817 | MS.gene73821:intron | 40.0% |
! | TTGGTTTGAAATACCCTGGA+GGG | + | chr4.4:31475526-31475545 | MS.gene73821:CDS | 40.0% |
!! | AAGAAGACTTTGGTTTGTGC+TGG | - | chr4.4:31475309-31475328 | None:intergenic | 40.0% |
!! | TAACTTGTTCCGTGGCAAAT+GGG | + | chr4.4:31472926-31472945 | MS.gene73821:CDS | 40.0% |
!! | TACAAATGTCGGTGTTGTGT+CGG | - | chr4.4:31473417-31473436 | None:intergenic | 40.0% |
!! | TTTGGTTTGAAATACCCTGG+AGG | + | chr4.4:31475525-31475544 | MS.gene73821:CDS | 40.0% |
AACGAACATCAGACACGACA+TGG | - | chr4.4:31473496-31473515 | None:intergenic | 45.0% | |
AAGGACTACAAACTTGGGCT+AGG | + | chr4.4:31475262-31475281 | MS.gene73821:CDS | 45.0% | |
CAATCAAGAGTGGTGAAGCT+TGG | + | chr4.4:31475013-31475032 | MS.gene73821:CDS | 45.0% | |
CAGATTTACTGGTAGGTGGT+AGG | - | chr4.4:31474657-31474676 | None:intergenic | 45.0% | |
GCACATCCTGAAGGTTATAG+TGG | + | chr4.4:31475648-31475667 | MS.gene73821:CDS | 45.0% | |
GCACGGACACTCTTTGAATT+AGG | + | chr4.4:31473385-31473404 | MS.gene73821:intron | 45.0% | |
GCCTTGAGGTTAGAACATGA+TGG | + | chr4.4:31473719-31473738 | MS.gene73821:intron | 45.0% | |
TCTATACCGCACAGCATACT+TGG | + | chr4.4:31474945-31474964 | MS.gene73821:CDS | 45.0% | |
TGATCTTCAACACGTGGCAT+TGG | + | chr4.4:31475052-31475071 | MS.gene73821:CDS | 45.0% | |
TTCCAAGTATCAGGAAGTCC+AGG | - | chr4.4:31475708-31475727 | None:intergenic | 45.0% | |
TTCCTGGACTTCCTGATACT+TGG | + | chr4.4:31475703-31475722 | MS.gene73821:CDS | 45.0% | |
! | ACTACAAACTTGGGCTAGGT+GGG | + | chr4.4:31475266-31475285 | MS.gene73821:CDS | 45.0% |
! | CATTTGCTGAAACAGGACCA+TGG | - | chr4.4:31474597-31474616 | None:intergenic | 45.0% |
! | GGAGGCTTTCTTTTGTGTTG+GGG | + | chr4.4:31473800-31473819 | MS.gene73821:intron | 45.0% |
!! | ACAAATGTCGGTGTTGTGTC+GGG | - | chr4.4:31473416-31473435 | None:intergenic | 45.0% |
!! | GGAACATGTAACTTGTTCCG+TGG | + | chr4.4:31472918-31472937 | MS.gene73821:CDS | 45.0% |
!! | GTAACTTGTTCCGTGGCAAA+TGG | + | chr4.4:31472925-31472944 | MS.gene73821:CDS | 45.0% |
!! | TGGTGAACAAGGTGTTGAGA+AGG | + | chr4.4:31475568-31475587 | MS.gene73821:CDS | 45.0% |
!! | TAATGAATTAAAAAAATATT+AGG | - | chr4.4:31474495-31474514 | None:intergenic | 5.0% |
AAGAGTGGTGAAGCTTGGAG+AGG | + | chr4.4:31475018-31475037 | MS.gene73821:CDS | 50.0% | |
ACGGTTGTGAACTTCCAGTG+TGG | - | chr4.4:31475083-31475102 | None:intergenic | 50.0% | |
ATACCGCACAGCATACTTGG+TGG | + | chr4.4:31474948-31474967 | MS.gene73821:CDS | 50.0% | |
CACTGGAAGTTCACAACCGT+AGG | + | chr4.4:31475083-31475102 | MS.gene73821:intron | 50.0% | |
CGGTTGTGAACTTCCAGTGT+GGG | - | chr4.4:31475082-31475101 | None:intergenic | 50.0% | |
CGTCGTAAACCCATTTGCCA+CGG | - | chr4.4:31472938-31472957 | None:intergenic | 50.0% | |
GTGGTATTAGGGGGAGAGAT+TGG | + | chr4.4:31475460-31475479 | MS.gene73821:intron | 50.0% | |
TGGCAACTGATTGTAGCCAC+TGG | + | chr4.4:31475676-31475695 | MS.gene73821:CDS | 50.0% | |
TGGTGAAGCTTGGAGAGGAA+TGG | + | chr4.4:31475023-31475042 | MS.gene73821:CDS | 50.0% | |
TTCACCACCATCCAAGCCAT+TGG | - | chr4.4:31475555-31475574 | None:intergenic | 50.0% | |
! | GACTACAAACTTGGGCTAGG+TGG | + | chr4.4:31475265-31475284 | MS.gene73821:CDS | 50.0% |
! | TCTTCAACACGTGGCATTGG+TGG | + | chr4.4:31475055-31475074 | MS.gene73821:CDS | 50.0% |
ATACCCTGGAGGGACACCAA+TGG | + | chr4.4:31475536-31475555 | MS.gene73821:CDS | 55.0% | |
GAAGTCCAGGAAGACACCAG+TGG | - | chr4.4:31475695-31475714 | None:intergenic | 55.0% | |
GGTCCACCAAGTATGCTGTG+CGG | - | chr4.4:31474954-31474973 | None:intergenic | 55.0% | |
TGTAGCCACTGGTGTCTTCC+TGG | + | chr4.4:31475687-31475706 | MS.gene73821:CDS | 55.0% | |
! | AAGCCATTGGTGTCCCTCCA+GGG | - | chr4.4:31475542-31475561 | None:intergenic | 55.0% |
! | AGGGACACCAATGGCTTGGA+TGG | + | chr4.4:31475545-31475564 | MS.gene73821:CDS | 55.0% |
! | GACACCAATGGCTTGGATGG+TGG | + | chr4.4:31475548-31475567 | MS.gene73821:CDS | 55.0% |
! | GGCTTGGATGGTGGTGAACA+AGG | + | chr4.4:31475557-31475576 | MS.gene73821:CDS | 55.0% |
CTGGAGGGACACCAATGGCT+TGG | + | chr4.4:31475541-31475560 | MS.gene73821:CDS | 60.0% | |
! | CAAGCCATTGGTGTCCCTCC+AGG | - | chr4.4:31475543-31475562 | None:intergenic | 60.0% |
!! | TGGCATTGGTGGACCCACAC+TGG | + | chr4.4:31475066-31475085 | MS.gene73821:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 31472798 | 31475758 | 31472798 | ID=MS.gene73821 |
chr4.4 | mRNA | 31472798 | 31475758 | 31472798 | ID=MS.gene73821.t1;Parent=MS.gene73821 |
chr4.4 | exon | 31472798 | 31473087 | 31472798 | ID=MS.gene73821.t1.exon1;Parent=MS.gene73821.t1 |
chr4.4 | CDS | 31472798 | 31473087 | 31472798 | ID=cds.MS.gene73821.t1;Parent=MS.gene73821.t1 |
chr4.4 | exon | 31473167 | 31473338 | 31473167 | ID=MS.gene73821.t1.exon2;Parent=MS.gene73821.t1 |
chr4.4 | CDS | 31473167 | 31473338 | 31473167 | ID=cds.MS.gene73821.t1;Parent=MS.gene73821.t1 |
chr4.4 | exon | 31474925 | 31475100 | 31474925 | ID=MS.gene73821.t1.exon3;Parent=MS.gene73821.t1 |
chr4.4 | CDS | 31474925 | 31475100 | 31474925 | ID=cds.MS.gene73821.t1;Parent=MS.gene73821.t1 |
chr4.4 | exon | 31475197 | 31475355 | 31475197 | ID=MS.gene73821.t1.exon4;Parent=MS.gene73821.t1 |
chr4.4 | CDS | 31475197 | 31475355 | 31475197 | ID=cds.MS.gene73821.t1;Parent=MS.gene73821.t1 |
chr4.4 | exon | 31475470 | 31475758 | 31475470 | ID=MS.gene73821.t1.exon5;Parent=MS.gene73821.t1 |
chr4.4 | CDS | 31475470 | 31475758 | 31475470 | ID=cds.MS.gene73821.t1;Parent=MS.gene73821.t1 |
Gene Sequence |
Protein sequence |