Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043158.t1 | XP_013455262.1 | 96.8 | 1047 | 30 | 1 | 1 | 1047 | 1 | 1044 | 0.00E+00 | 1859.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043158.t1 | Q60EW9 | 65.0 | 782 | 262 | 7 | 270 | 1047 | 1 | 774 | 1.9e-304 | 1046.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043158.t1 | A0A072UJM2 | 96.8 | 1047 | 30 | 1 | 1 | 1047 | 1 | 1044 | 0.0e+00 | 1859.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene070339 | MS.gene043158 | PPI |
| MS.gene50295 | MS.gene043158 | PPI |
| MS.gene043158 | MS.gene030426 | PPI |
| MS.gene015570 | MS.gene043158 | PPI |
| MS.gene048777 | MS.gene043158 | PPI |
| MS.gene99080 | MS.gene043158 | PPI |
| MS.gene072801 | MS.gene043158 | PPI |
| MS.gene050376 | MS.gene043158 | PPI |
| MS.gene066619 | MS.gene043158 | PPI |
| MS.gene72170 | MS.gene043158 | PPI |
| MS.gene048780 | MS.gene043158 | PPI |
| MS.gene68918 | MS.gene043158 | PPI |
| MS.gene019289 | MS.gene043158 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043158.t1 | MTR_4g033215 | 97.517 | 1047 | 23 | 2 | 1 | 1047 | 1 | 1044 | 0.0 | 2128 |
| MS.gene043158.t1 | MTR_5g010390 | 52.814 | 1066 | 419 | 18 | 3 | 1047 | 5 | 1007 | 0.0 | 1108 |
| MS.gene043158.t1 | MTR_4g023460 | 49.303 | 1148 | 472 | 19 | 3 | 1047 | 2 | 1142 | 0.0 | 1080 |
| MS.gene043158.t1 | MTR_7g092770 | 65.161 | 775 | 257 | 8 | 279 | 1047 | 8 | 775 | 0.0 | 1073 |
| MS.gene043158.t1 | MTR_0305s0020 | 66.065 | 775 | 249 | 9 | 279 | 1047 | 8 | 774 | 0.0 | 1056 |
| MS.gene043158.t1 | MTR_4g066150 | 64.396 | 778 | 268 | 6 | 271 | 1047 | 1 | 770 | 0.0 | 1048 |
| MS.gene043158.t1 | MTR_3g027150 | 60.127 | 790 | 292 | 6 | 279 | 1047 | 35 | 822 | 0.0 | 1000 |
| MS.gene043158.t1 | MTR_0291s0010 | 59.343 | 792 | 302 | 7 | 274 | 1047 | 8 | 797 | 0.0 | 993 |
| MS.gene043158.t1 | MTR_8g031270 | 49.343 | 1066 | 452 | 21 | 3 | 1047 | 5 | 1003 | 0.0 | 986 |
| MS.gene043158.t1 | MTR_7g076900 | 48.408 | 1068 | 469 | 21 | 3 | 1047 | 5 | 1013 | 0.0 | 983 |
| MS.gene043158.t1 | MTR_4g057675 | 50.826 | 787 | 358 | 11 | 275 | 1047 | 12 | 783 | 0.0 | 769 |
| MS.gene043158.t1 | MTR_4g107850 | 49.935 | 765 | 332 | 18 | 305 | 1047 | 303 | 1038 | 0.0 | 733 |
| MS.gene043158.t1 | MTR_4g107850 | 36.296 | 135 | 77 | 4 | 1 | 127 | 16 | 149 | 9.76e-17 | 86.3 |
| MS.gene043158.t1 | MTR_4g071870 | 48.666 | 787 | 341 | 12 | 275 | 1047 | 12 | 749 | 0.0 | 732 |
| MS.gene043158.t1 | MTR_6g028050 | 45.490 | 765 | 375 | 15 | 303 | 1047 | 284 | 1026 | 0.0 | 685 |
| MS.gene043158.t1 | MTR_6g028050 | 34.109 | 129 | 78 | 2 | 1 | 123 | 4 | 131 | 9.79e-17 | 86.3 |
| MS.gene043158.t1 | MTR_1g015540 | 45.170 | 766 | 381 | 14 | 298 | 1042 | 21 | 768 | 0.0 | 615 |
| MS.gene043158.t1 | MTR_5g096980 | 37.582 | 761 | 442 | 13 | 301 | 1047 | 22 | 763 | 4.87e-166 | 507 |
| MS.gene043158.t1 | MTR_4g023250 | 60.000 | 130 | 50 | 1 | 917 | 1046 | 1 | 128 | 8.95e-49 | 169 |
| MS.gene043158.t1 | MTR_4g023230 | 47.541 | 122 | 49 | 1 | 834 | 955 | 49 | 155 | 3.78e-30 | 117 |
| MS.gene043158.t1 | MTR_4g023390 | 47.115 | 104 | 33 | 2 | 920 | 1023 | 16 | 97 | 5.41e-22 | 92.0 |
| MS.gene043158.t1 | MTR_6g027540 | 38.281 | 128 | 71 | 3 | 1 | 122 | 9 | 134 | 2.46e-19 | 94.7 |
| MS.gene043158.t1 | MTR_6g028070 | 32.000 | 150 | 91 | 4 | 1 | 144 | 4 | 148 | 5.50e-17 | 81.3 |
| MS.gene043158.t1 | MTR_4g023240 | 60.000 | 60 | 24 | 0 | 768 | 827 | 10 | 69 | 1.38e-15 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043158.t1 | AT1G22610 | 68.079 | 1062 | 291 | 10 | 1 | 1047 | 1 | 1029 | 0.0 | 1457 |
| MS.gene043158.t1 | AT4G11610 | 52.488 | 1065 | 426 | 20 | 3 | 1047 | 7 | 1011 | 0.0 | 1092 |
| MS.gene043158.t1 | AT4G11610 | 52.113 | 1065 | 426 | 18 | 3 | 1047 | 7 | 1007 | 0.0 | 1090 |
| MS.gene043158.t1 | AT3G57880 | 66.408 | 774 | 247 | 8 | 279 | 1047 | 8 | 773 | 0.0 | 1078 |
| MS.gene043158.t1 | AT3G57880 | 66.408 | 774 | 247 | 8 | 279 | 1047 | 8 | 773 | 0.0 | 1078 |
| MS.gene043158.t1 | AT3G57880 | 66.408 | 774 | 247 | 8 | 279 | 1047 | 8 | 773 | 0.0 | 1078 |
| MS.gene043158.t1 | AT3G57880 | 66.408 | 774 | 247 | 8 | 279 | 1047 | 8 | 773 | 0.0 | 1078 |
| MS.gene043158.t1 | AT1G51570 | 65.722 | 776 | 252 | 8 | 279 | 1047 | 8 | 776 | 0.0 | 1065 |
| MS.gene043158.t1 | AT5G12970 | 65.039 | 778 | 262 | 7 | 271 | 1047 | 1 | 769 | 0.0 | 1054 |
| MS.gene043158.t1 | AT5G48060 | 51.643 | 1065 | 463 | 16 | 2 | 1047 | 5 | 1036 | 0.0 | 1047 |
| MS.gene043158.t1 | AT4G11610 | 62.484 | 781 | 278 | 8 | 276 | 1047 | 100 | 874 | 0.0 | 1025 |
| MS.gene043158.t1 | AT5G06850 | 59.137 | 788 | 306 | 4 | 275 | 1047 | 8 | 794 | 0.0 | 1002 |
| MS.gene043158.t1 | AT4G00700 | 47.989 | 1069 | 465 | 22 | 3 | 1047 | 5 | 1006 | 0.0 | 956 |
| MS.gene043158.t1 | AT4G00700 | 47.989 | 1069 | 465 | 22 | 3 | 1047 | 5 | 1006 | 0.0 | 956 |
| MS.gene043158.t1 | AT3G61300 | 47.293 | 1053 | 461 | 25 | 3 | 1047 | 6 | 972 | 0.0 | 925 |
| MS.gene043158.t1 | AT1G04150 | 46.828 | 1072 | 472 | 23 | 3 | 1047 | 12 | 1012 | 0.0 | 917 |
| MS.gene043158.t1 | AT4G20080 | 50.258 | 776 | 362 | 11 | 280 | 1047 | 15 | 774 | 0.0 | 807 |
| MS.gene043158.t1 | AT1G74720 | 41.900 | 1105 | 541 | 30 | 3 | 1047 | 18 | 1081 | 0.0 | 804 |
| MS.gene043158.t1 | AT5G17980 | 39.497 | 1114 | 535 | 30 | 3 | 1047 | 6 | 1049 | 0.0 | 749 |
| MS.gene043158.t1 | AT3G03680 | 47.903 | 787 | 352 | 16 | 288 | 1047 | 262 | 1017 | 0.0 | 723 |
| MS.gene043158.t1 | AT3G61720 | 36.902 | 794 | 420 | 24 | 303 | 1046 | 32 | 794 | 3.56e-145 | 454 |
| MS.gene043158.t1 | AT5G03435 | 36.680 | 777 | 435 | 22 | 279 | 1041 | 7 | 740 | 1.50e-138 | 435 |
| MS.gene043158.t1 | AT5G03435 | 39.100 | 578 | 315 | 14 | 279 | 847 | 7 | 556 | 1.23e-117 | 374 |
| MS.gene043158.t1 | AT5G44760 | 42.537 | 402 | 185 | 10 | 279 | 676 | 5 | 364 | 1.70e-91 | 301 |
| MS.gene043158.t1 | AT5G44760 | 32.847 | 137 | 43 | 1 | 813 | 949 | 364 | 451 | 1.87e-16 | 84.0 |
| MS.gene043158.t1 | AT1G03370 | 39.024 | 123 | 71 | 3 | 314 | 435 | 3 | 122 | 2.18e-14 | 78.6 |
| MS.gene043158.t1 | AT1G03370 | 39.024 | 123 | 71 | 3 | 314 | 435 | 3 | 122 | 2.24e-14 | 78.6 |
Find 240 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAAATTCTTCTTAGTATT+TGG | 0.111290 | 4.2:-71554203 | None:intergenic |
| CGGTTGAACATAATGCATTT+TGG | 0.124007 | 4.2:-71556319 | None:intergenic |
| CTTGGAAAGGTGAGAATTTC+AGG | 0.135122 | 4.2:+71554224 | MS.gene043158:CDS |
| TGAGAGGCTTTAACCCTATT+TGG | 0.166763 | 4.2:+71555512 | MS.gene043158:CDS |
| TTTCATTAAAATAAGGATTT+TGG | 0.191984 | 4.2:-71554097 | None:intergenic |
| CAACTATAATTGCTATAAAT+TGG | 0.221955 | 4.2:-71556986 | None:intergenic |
| TACTCATTATTATCCTCTTT+TGG | 0.232381 | 4.2:+71556188 | MS.gene043158:CDS |
| TGAACAAGGCAAGTTGTAAT+TGG | 0.232879 | 4.2:-71556576 | None:intergenic |
| TTTCTTTACTTGTTTGTGAT+TGG | 0.239952 | 4.2:+71556651 | MS.gene043158:CDS |
| ACGAGCATCCGGAAGCTTTC+CGG | 0.246203 | 4.2:-71555677 | None:intergenic |
| GTTTCCACCAATGCATATTC+TGG | 0.248708 | 4.2:-71554797 | None:intergenic |
| TCCTAACAATGTTGAAATCT+TGG | 0.261337 | 4.2:+71555609 | MS.gene043158:CDS |
| CCTTCATAGGTAGCAAATTC+CGG | 0.278494 | 4.2:-71555912 | None:intergenic |
| ATAAGCTCCTCGTTCCAAAT+AGG | 0.279173 | 4.2:-71555526 | None:intergenic |
| TTCTTTACTTGTTTGTGATT+GGG | 0.281409 | 4.2:+71556652 | MS.gene043158:CDS |
| TGACATTATGCGATGAAAAT+TGG | 0.281887 | 4.2:-71556493 | None:intergenic |
| TCATCATCTTCTCACTGATC+TGG | 0.283757 | 4.2:+71556937 | MS.gene043158:CDS |
| CATATTCTGGATTCTGCTTT+GGG | 0.284632 | 4.2:-71554784 | None:intergenic |
| TCAGATCATTGTATCTGATT+TGG | 0.286145 | 4.2:-71557087 | None:intergenic |
| AACCCATTTGTTTCCATACT+TGG | 0.294660 | 4.2:-71555971 | None:intergenic |
| CATTGATTGGCTCCGCTATC+AGG | 0.304148 | 4.2:+71556356 | MS.gene043158:CDS |
| GCATATTCTGGATTCTGCTT+TGG | 0.308566 | 4.2:-71554785 | None:intergenic |
| GTGACAGTTGAGGACAAATT+TGG | 0.316140 | 4.2:+71555586 | MS.gene043158:CDS |
| TTGCACAGCTTGGGTTAATA+TGG | 0.320005 | 4.2:+71556269 | MS.gene043158:CDS |
| CCCAAGATTTCAACATTGTT+AGG | 0.320279 | 4.2:-71555610 | None:intergenic |
| TCAAAGTTTATTTGAACATA+AGG | 0.320567 | 4.2:-71554038 | None:intergenic |
| ATGGTTGGCAGTATCAATTC+AGG | 0.324194 | 4.2:-71556627 | None:intergenic |
| CTTGTTTGAGTTTCAACTCT+TGG | 0.324264 | 4.2:-71554713 | None:intergenic |
| GCATACTGTGTTGCCAAGTA+TGG | 0.338450 | 4.2:+71555958 | MS.gene043158:CDS |
| TTCCAATTCTCTGATCTTTG+TGG | 0.338538 | 4.2:-71556122 | None:intergenic |
| ATCTGCATTAACATAACATT+TGG | 0.343336 | 4.2:-71554761 | None:intergenic |
| GAGTTCCACAAGCTTCTGTT+AGG | 0.347484 | 4.2:+71555446 | MS.gene043158:CDS |
| GAATTGGAAAGGTGAGAATA+AGG | 0.347930 | 4.2:+71556136 | MS.gene043158:CDS |
| ACTCTTGGTGTTTCAAAAGA+TGG | 0.351137 | 4.2:-71554698 | None:intergenic |
| TGTAAAGGAATTTCCTCATC+AGG | 0.351220 | 4.2:-71554440 | None:intergenic |
| ACTTGTTTGTGATTGGGATT+TGG | 0.356204 | 4.2:+71556658 | MS.gene043158:CDS |
| TGTGGAGGAGGGTGAGAATT+AGG | 0.359962 | 4.2:-71554371 | None:intergenic |
| TGATTGGGATTTGGAATTAC+CGG | 0.361185 | 4.2:+71556667 | MS.gene043158:CDS |
| CTGGATTCAGATTCAGATAT+AGG | 0.362359 | 4.2:-71554257 | None:intergenic |
| GGATTTGGAATTACCGGTTC+CGG | 0.369744 | 4.2:+71556673 | MS.gene043158:CDS |
| AGTGATTGAAGCTCAAGATT+TGG | 0.370365 | 4.2:+71555405 | MS.gene043158:CDS |
| AGTTTGTCATCCAGATGAAT+TGG | 0.372417 | 4.2:+71556740 | MS.gene043158:CDS |
| GATTTGGTTCCTCATGATAA+AGG | 0.374508 | 4.2:+71555421 | MS.gene043158:CDS |
| GACCACAAAGATCAGAGAAT+TGG | 0.375978 | 4.2:+71556120 | MS.gene043158:CDS |
| CCAAGTTTCACTTCCACATA+AGG | 0.380141 | 4.2:-71554968 | None:intergenic |
| AAGAGGGTAACGTTTGATAC+TGG | 0.380542 | 4.2:-71554276 | None:intergenic |
| AATCTCTTGAAGAAATTAAC+TGG | 0.381502 | 4.2:-71557059 | None:intergenic |
| GTGGATTCCTTGGCCGGAAC+CGG | 0.384013 | 4.2:-71556686 | None:intergenic |
| ATCTTAATGAAGTGCCGGTT+AGG | 0.389058 | 4.2:+71555155 | MS.gene043158:CDS |
| CTACCATCTTTGCCCTTCAT+AGG | 0.399165 | 4.2:-71555925 | None:intergenic |
| ATTGGAGACCGGAAAGCTTC+CGG | 0.401323 | 4.2:+71555669 | MS.gene043158:CDS |
| CAAAGTTTATTTGAACATAA+GGG | 0.401524 | 4.2:-71554037 | None:intergenic |
| GCAGCTAGGTTGAGGTATAA+AGG | 0.402038 | 4.2:+71554833 | MS.gene043158:CDS |
| TGAGGTTTACTTGCACAGCT+TGG | 0.403193 | 4.2:+71556259 | MS.gene043158:CDS |
| TAAGCTCCTCGTTCCAAATA+GGG | 0.405460 | 4.2:-71555525 | None:intergenic |
| GGCTCCTCAGTGGTATAGAT+TGG | 0.406615 | 4.2:+71555198 | MS.gene043158:CDS |
| CTAAATCTCCAACCACAGTT+TGG | 0.407369 | 4.2:-71556851 | None:intergenic |
| AGCCAATCAATGTGTCTAAC+AGG | 0.409018 | 4.2:-71556345 | None:intergenic |
| GAGGTATAAAGGAGGGAATA+AGG | 0.409912 | 4.2:+71554844 | MS.gene043158:CDS |
| GCAGGAGCAGGAGCAGGAGC+AGG | 0.410631 | 4.2:-71554632 | None:intergenic |
| GCAGGAGCAGGAGCAGGAGC+AGG | 0.410631 | 4.2:-71554638 | None:intergenic |
| GAGGTTTACTTGCACAGCTT+GGG | 0.411394 | 4.2:+71556260 | MS.gene043158:CDS |
| CTATCCGGCGGAACCCTAAC+CGG | 0.413279 | 4.2:-71555169 | None:intergenic |
| CCGGAATTTGCTACCTATGA+AGG | 0.416546 | 4.2:+71555912 | MS.gene043158:CDS |
| TACCTGTTAGACACATTGAT+TGG | 0.416771 | 4.2:+71556343 | MS.gene043158:CDS |
| GTATACTGCTCATTCCATCT+AGG | 0.418342 | 4.2:-71556024 | None:intergenic |
| TTCATAGACCTAGTGCGGTC+GGG | 0.419260 | 4.2:+71555710 | MS.gene043158:CDS |
| CTTCATAGGTAGCAAATTCC+GGG | 0.419673 | 4.2:-71555911 | None:intergenic |
| GAACAAGGCAAGTTGTAATT+GGG | 0.420619 | 4.2:-71556575 | None:intergenic |
| GTGAAATTATGCTTGCTGTT+TGG | 0.421078 | 4.2:+71555251 | MS.gene043158:CDS |
| CCTAACAATGTTGAAATCTT+GGG | 0.421281 | 4.2:+71555610 | MS.gene043158:CDS |
| ATAAGAATCAGCATCCTGTT+TGG | 0.424122 | 4.2:+71555020 | MS.gene043158:CDS |
| GGTTCCGCCGGATAGTCCTT+TGG | 0.424308 | 4.2:+71555177 | MS.gene043158:CDS |
| TCCATGTGGGGTGGATTCCT+TGG | 0.425380 | 4.2:-71556696 | None:intergenic |
| AGTAACCTTGTTCCAAAAGA+TGG | 0.430689 | 4.2:+71553999 | MS.gene043158:CDS |
| AATTCCTCATCCAATTCATC+TGG | 0.433329 | 4.2:-71556750 | None:intergenic |
| TCTTCCTCCCCGACCGCACT+AGG | 0.438943 | 4.2:-71555718 | None:intergenic |
| GAGCTCAAGCTTTACTGAGT+TGG | 0.439961 | 4.2:+71556889 | MS.gene043158:CDS |
| GCAAAGATTTGCTTCCAAAC+AGG | 0.440169 | 4.2:-71555034 | None:intergenic |
| GAGAAATGTTCCGCAAAGAT+TGG | 0.442111 | 4.2:+71555651 | MS.gene043158:CDS |
| AGGGTTGATTATGCAAAATC+AGG | 0.443775 | 4.2:+71554734 | MS.gene043158:CDS |
| CTTCCTGTGATGGATATAAC+AGG | 0.444787 | 4.2:+71554935 | MS.gene043158:CDS |
| CATCATCTTCTCACTGATCT+GGG | 0.444824 | 4.2:+71556938 | MS.gene043158:CDS |
| CAAGTTTCACTTCCACATAA+GGG | 0.444872 | 4.2:-71554967 | None:intergenic |
| CTTGTGAATGTTGTGGAGGA+GGG | 0.445456 | 4.2:-71554382 | None:intergenic |
| GCAGAAGCAGGAGCAGGAGC+AGG | 0.447720 | 4.2:-71554644 | None:intergenic |
| CTCCGAATTTGTCTTGAGGC+AGG | 0.448291 | 4.2:+71555781 | MS.gene043158:CDS |
| TTCTCCTTAGACTCCACATA+TGG | 0.451473 | 4.2:-71556464 | None:intergenic |
| ATTACCATATGTGGAGTCTA+AGG | 0.455668 | 4.2:+71556460 | MS.gene043158:CDS |
| CTCCTCAAGTGTTTCGAAGA+CGG | 0.456677 | 4.2:-71555850 | None:intergenic |
| TTTCCGGTCTCCAATCTTTG+CGG | 0.458718 | 4.2:-71555661 | None:intergenic |
| GTAGGAGGTGTATTAGCAAA+AGG | 0.462769 | 4.2:-71554347 | None:intergenic |
| GCTTGTGAATGTTGTGGAGG+AGG | 0.463112 | 4.2:-71554383 | None:intergenic |
| CAATTTATAGCAATTATAGT+TGG | 0.463673 | 4.2:+71556987 | MS.gene043158:CDS |
| GAACGAGGAGCTTATGTTTG+TGG | 0.463949 | 4.2:+71555534 | MS.gene043158:CDS |
| ACTCTAAGATAATAAAGCTT+AGG | 0.464605 | 4.2:-71555379 | None:intergenic |
| TCTTCATGCTGCGTCATCCT+CGG | 0.465845 | 4.2:+71557012 | MS.gene043158:CDS |
| ATATCAGCAGGTCTTGTAGT+TGG | 0.468121 | 4.2:-71556783 | None:intergenic |
| TTGACACACTGTCCCCTAGA+TGG | 0.468348 | 4.2:+71556010 | MS.gene043158:CDS |
| ACATTGGATATCTCGAACTC+GGG | 0.475864 | 4.2:+71555878 | MS.gene043158:CDS |
| TCTTAATGAAGTGCCGGTTA+GGG | 0.476718 | 4.2:+71555156 | MS.gene043158:CDS |
| GGAAAAGCAGAAGCAGGAGC+AGG | 0.478862 | 4.2:-71554650 | None:intergenic |
| GGAAGAAACGGAGAGAAAGA+AGG | 0.480058 | 4.2:+71555735 | MS.gene043158:CDS |
| CTTGTTCCAAAAGATGGAAA+AGG | 0.486686 | 4.2:+71554005 | MS.gene043158:CDS |
| CATTCTCATGGTCATGGTCA+TGG | 0.489256 | 4.2:+71554602 | MS.gene043158:CDS |
| TGCATTAACATAACATTTGG+AGG | 0.489849 | 4.2:-71554758 | None:intergenic |
| TGAGGAGCCAAAGGACTATC+CGG | 0.491599 | 4.2:-71555184 | None:intergenic |
| GGGTGAGAATTAGGTGTAGG+AGG | 0.493442 | 4.2:-71554362 | None:intergenic |
| TGCGGTCGGGGAGGAAGAAA+CGG | 0.495420 | 4.2:+71555723 | MS.gene043158:CDS |
| TATACTGCTCATTCCATCTA+GGG | 0.496045 | 4.2:-71556023 | None:intergenic |
| CTACCTATGAAGGGCAAAGA+TGG | 0.497187 | 4.2:+71555922 | MS.gene043158:CDS |
| CACCACTTGCAGCTAGGTTG+AGG | 0.497949 | 4.2:+71554825 | MS.gene043158:CDS |
| TACCCTCTTGAACATTCAAA+AGG | 0.500847 | 4.2:+71554290 | MS.gene043158:CDS |
| TTGCCAAGTATGGAAACAAA+TGG | 0.503643 | 4.2:+71555968 | MS.gene043158:CDS |
| AATTATGCTTGCTGTTTGGA+TGG | 0.504180 | 4.2:+71555255 | MS.gene043158:CDS |
| TCGCATAATGTCACTACTCT+CGG | 0.504638 | 4.2:+71556503 | MS.gene043158:CDS |
| ACAATTATAATATCCTCAAA+AGG | 0.505624 | 4.2:-71555565 | None:intergenic |
| TGTGGGGTGGATTCCTTGGC+CGG | 0.505865 | 4.2:-71556692 | None:intergenic |
| TTAGTGTTGATTTCTTGTAA+AGG | 0.509202 | 4.2:-71554455 | None:intergenic |
| GGAATTTCCTCATCAGGGTC+AGG | 0.510359 | 4.2:-71554434 | None:intergenic |
| AGATTGAACCAACGAGCATC+CGG | 0.511725 | 4.2:-71555688 | None:intergenic |
| TGTGGTCACTGCTACCATTG+AGG | 0.518823 | 4.2:-71556104 | None:intergenic |
| TACAATCAAGATGAACAGAT+TGG | 0.519351 | 4.2:+71553956 | None:intergenic |
| GCATCAGAATGCCATGCCTC+AGG | 0.521107 | 4.2:-71555301 | None:intergenic |
| CGCATAATGTCACTACTCTC+GGG | 0.522301 | 4.2:+71556504 | MS.gene043158:CDS |
| CTCATTCGAACAATATCAGC+AGG | 0.525290 | 4.2:-71556795 | None:intergenic |
| TTTACTTGAAGTTACTGTGA+AGG | 0.525641 | 4.2:+71555084 | MS.gene043158:CDS |
| AGCAAAAGAACTTCCTGTGA+TGG | 0.526165 | 4.2:+71554925 | MS.gene043158:CDS |
| AACTCGGGATACTTAGTGCC+CGG | 0.528434 | 4.2:+71555893 | MS.gene043158:CDS |
| CAAGATGAACAGATTGGTGG+TGG | 0.528684 | 4.2:+71553962 | None:intergenic |
| GGAATTACCGGTTCCGGCCA+AGG | 0.528999 | 4.2:+71556679 | MS.gene043158:CDS |
| TTTGACAATCACCACCTCAA+TGG | 0.529571 | 4.2:+71556090 | MS.gene043158:CDS |
| ATAATTGCTATAAATTGGAA+TGG | 0.531398 | 4.2:-71556981 | None:intergenic |
| TGCCAAGTATGGAAACAAAT+GGG | 0.532532 | 4.2:+71555969 | MS.gene043158:CDS |
| GGCAATTTGCTTCGAAACCG+AGG | 0.534396 | 4.2:-71557029 | None:intergenic |
| TTGAGCTCTTTCGCCTTGAG+TGG | 0.534744 | 4.2:-71556874 | None:intergenic |
| GCTCACAAAACAGTTGAAGT+TGG | 0.535491 | 4.2:+71554155 | MS.gene043158:CDS |
| AACATTGGATATCTCGAACT+CGG | 0.535580 | 4.2:+71555877 | MS.gene043158:CDS |
| AAAGGGATGAAGATAAATCA+TGG | 0.536402 | 4.2:+71555229 | MS.gene043158:CDS |
| AACCGTCTTCGAAACACTTG+AGG | 0.536418 | 4.2:+71555848 | MS.gene043158:CDS |
| TCATAGACCTAGTGCGGTCG+GGG | 0.537726 | 4.2:+71555711 | MS.gene043158:CDS |
| CCTTATGTGGAAGTGAAACT+TGG | 0.541605 | 4.2:+71554968 | MS.gene043158:CDS |
| GTTTATTTGAACATAAGGGT+TGG | 0.541666 | 4.2:-71554033 | None:intergenic |
| ACCCTGCCTCAAGACAAATT+CGG | 0.542105 | 4.2:-71555783 | None:intergenic |
| GTTTGATCTTAATGAAGTGC+CGG | 0.542712 | 4.2:+71555150 | MS.gene043158:CDS |
| CTTCATAGACCTAGTGCGGT+CGG | 0.545411 | 4.2:+71555709 | MS.gene043158:CDS |
| GGAGGGTGAGAATTAGGTGT+AGG | 0.545490 | 4.2:-71554365 | None:intergenic |
| TTAGGTTGAAGAACCAAAAG+AGG | 0.547365 | 4.2:-71556201 | None:intergenic |
| TCCTCAGTGGTATAGATTGG+AGG | 0.548476 | 4.2:+71555201 | MS.gene043158:CDS |
| AAGAAATTAACTGGTACTGA+TGG | 0.550550 | 4.2:-71557050 | None:intergenic |
| TACTGAGTTGGAGAGACTCA+AGG | 0.551057 | 4.2:+71556901 | MS.gene043158:CDS |
| CCTTCTCATTCTCATGGTCA+TGG | 0.551942 | 4.2:+71554596 | MS.gene043158:CDS |
| AGTTCCACAAGCTTCTGTTA+GGG | 0.553072 | 4.2:+71555447 | MS.gene043158:CDS |
| TCATCCAGATGAATTGGATG+AGG | 0.553450 | 4.2:+71556746 | MS.gene043158:CDS |
| AGGAAGTCTTGACCCTTATG+TGG | 0.554282 | 4.2:+71554955 | MS.gene043158:CDS |
| GGTAGAGTCCAAACTGTGGT+TGG | 0.554358 | 4.2:+71556843 | MS.gene043158:CDS |
| CTTCCTGTTATATCCATCAC+AGG | 0.554956 | 4.2:-71554938 | None:intergenic |
| GCCAAGGAATCCACCCCACA+TGG | 0.555721 | 4.2:+71556695 | MS.gene043158:CDS |
| CATGGATGCTAGGCTTTCAC+AGG | 0.556002 | 4.2:+71556713 | MS.gene043158:CDS |
| GGCTTAACGACATTTGCACT+TGG | 0.556646 | 4.2:+71556547 | MS.gene043158:CDS |
| TCAATGTGTCTAACAGGTAT+CGG | 0.558957 | 4.2:-71556339 | None:intergenic |
| TCCGAATTTGTCTTGAGGCA+GGG | 0.560189 | 4.2:+71555782 | MS.gene043158:CDS |
| ACAGAAGGAAAAGCAGAAGC+AGG | 0.560238 | 4.2:-71554656 | None:intergenic |
| CCTTGCTGCCACAATCTGCA+TGG | 0.563384 | 4.2:-71556379 | None:intergenic |
| AAAGAATGGAGAGCTGCACT+TGG | 0.565426 | 4.2:+71556233 | MS.gene043158:CDS |
| ATCCACCCCACATGGATGCT+AGG | 0.566521 | 4.2:+71556703 | MS.gene043158:CDS |
| GAATCCAGAATATGCATTGG+TGG | 0.567312 | 4.2:+71554793 | MS.gene043158:CDS |
| GAAAGCTTCCGGATGCTCGT+TGG | 0.567546 | 4.2:+71555680 | MS.gene043158:CDS |
| CTATCAGGCCATGCAGATTG+TGG | 0.567929 | 4.2:+71556371 | MS.gene043158:CDS |
| CAGCTCCACCACTTGCAGCT+AGG | 0.568046 | 4.2:+71554819 | MS.gene043158:CDS |
| ATCATTGTATCTGATTTGGA+AGG | 0.569129 | 4.2:-71557083 | None:intergenic |
| TACGACAGATTGAGAAGTGT+GGG | 0.570803 | 4.2:+71556819 | MS.gene043158:CDS |
| ACAAGGGTTTCTCAAATGAG+AGG | 0.571760 | 4.2:+71555496 | MS.gene043158:CDS |
| GTTGGAGATTTAGCCACTCA+AGG | 0.572360 | 4.2:+71556861 | MS.gene043158:CDS |
| CAATGTTGAAATCTTGGGAA+GGG | 0.579041 | 4.2:+71555615 | MS.gene043158:CDS |
| TAGGAGGTGTATTAGCAAAA+GGG | 0.582193 | 4.2:-71554346 | None:intergenic |
| ATTATGCTTGCTGTTTGGAT+GGG | 0.582370 | 4.2:+71555256 | MS.gene043158:CDS |
| CTATACCACTGAGGAGCCAA+AGG | 0.584006 | 4.2:-71555193 | None:intergenic |
| TGGTTGGCAGTATCAATTCA+GGG | 0.584676 | 4.2:-71556626 | None:intergenic |
| GATGGAATGAGCAGTATACA+TGG | 0.585191 | 4.2:+71556028 | MS.gene043158:CDS |
| GTAAAGGAATTTCCTCATCA+GGG | 0.585924 | 4.2:-71554439 | None:intergenic |
| CAAGAGTTGAAACTCAAACA+AGG | 0.587219 | 4.2:+71554714 | MS.gene043158:CDS |
| CTGCTGATATTGTTCGAATG+AGG | 0.587966 | 4.2:+71556796 | MS.gene043158:CDS |
| CGGAATTTGCTACCTATGAA+GGG | 0.588456 | 4.2:+71555913 | MS.gene043158:CDS |
| GGAACTCTTCCTTTATCATG+AGG | 0.590334 | 4.2:-71555430 | None:intergenic |
| CTTTAACCCTATTTGGAACG+AGG | 0.591388 | 4.2:+71555519 | MS.gene043158:CDS |
| CCATGCAGATTGTGGCAGCA+AGG | 0.592875 | 4.2:+71556379 | MS.gene043158:CDS |
| CCTTCGATCGCGTATTCGAG+AGG | 0.593012 | 4.2:-71555345 | None:intergenic |
| ACTGAGTTGGAGAGACTCAA+GGG | 0.596495 | 4.2:+71556902 | MS.gene043158:CDS |
| TTTGCTTGTGAATGTTGTGG+AGG | 0.598761 | 4.2:-71554386 | None:intergenic |
| CTAACTGTGATCACAGTGCA+TGG | 0.599529 | 4.2:-71556063 | None:intergenic |
| CAAAGATCAGAGAATTGGAA+AGG | 0.600718 | 4.2:+71556125 | MS.gene043158:CDS |
| TATTATAATTGTGACAGTTG+AGG | 0.601359 | 4.2:+71555576 | MS.gene043158:CDS |
| TCAACTGATTCACGTCGAAG+TGG | 0.602308 | 4.2:-71556420 | None:intergenic |
| GTGAAACTTGGTAACTACAA+AGG | 0.604614 | 4.2:+71554980 | MS.gene043158:CDS |
| CCTCTCGAATACGCGATCGA+AGG | 0.607582 | 4.2:+71555345 | MS.gene043158:CDS |
| AGCCTAGCATCCATGTGGGG+TGG | 0.607689 | 4.2:-71556705 | None:intergenic |
| ACAATGTTGAAATCTTGGGA+AGG | 0.608947 | 4.2:+71555614 | MS.gene043158:CDS |
| AATCAAGATGAACAGATTGG+TGG | 0.611206 | 4.2:+71553959 | None:intergenic |
| CTCAACCTAGCTGCAAGTGG+TGG | 0.612125 | 4.2:-71554824 | None:intergenic |
| GCAGAATCCAGAATATGCAT+TGG | 0.615456 | 4.2:+71554790 | MS.gene043158:CDS |
| CTTGAACCATGATTAACAGA+AGG | 0.616122 | 4.2:-71554671 | None:intergenic |
| GTTCCGCAAAGATTGGAGAC+CGG | 0.616738 | 4.2:+71555658 | MS.gene043158:CDS |
| CAATCTGCATGGCCTGATAG+CGG | 0.622267 | 4.2:-71556368 | None:intergenic |
| CGTCTTCGAAACACTTGAGG+AGG | 0.625391 | 4.2:+71555851 | MS.gene043158:CDS |
| CCATGACCATGAGAATGAGA+AGG | 0.625451 | 4.2:-71554596 | None:intergenic |
| GAGAGCTGCACTTGGCTGTG+AGG | 0.625943 | 4.2:+71556241 | MS.gene043158:CDS |
| TACCTCAACCTAGCTGCAAG+TGG | 0.626178 | 4.2:-71554827 | None:intergenic |
| ATTTGAGCCTGACCCTGATG+AGG | 0.628701 | 4.2:+71554427 | MS.gene043158:CDS |
| AAGAGTTGAAACTCAAACAA+GGG | 0.629617 | 4.2:+71554715 | MS.gene043158:CDS |
| TCATCTCCGAATTTGTCTTG+AGG | 0.633898 | 4.2:+71555777 | MS.gene043158:CDS |
| AGTTGAGTATATGCTTGATG+TGG | 0.638952 | 4.2:+71556437 | MS.gene043158:CDS |
| AGTGCCGGTTAGGGTTCCGC+CGG | 0.639109 | 4.2:+71555165 | MS.gene043158:CDS |
| CTTGGGAAGGGAGATTATGT+CGG | 0.642034 | 4.2:+71555627 | MS.gene043158:CDS |
| GCTTCTGTTAGGGTTCAGCT+AGG | 0.645640 | 4.2:+71555457 | MS.gene043158:CDS |
| GTACGACAGATTGAGAAGTG+TGG | 0.649017 | 4.2:+71556818 | MS.gene043158:CDS |
| GAAGTCAGATGAGATTCACA+AGG | 0.656489 | 4.2:+71555479 | MS.gene043158:CDS |
| TAGACCTAGTGCGGTCGGGG+AGG | 0.656681 | 4.2:+71555714 | MS.gene043158:CDS |
| TGAAAGCCTAGCATCCATGT+GGG | 0.656949 | 4.2:-71556709 | None:intergenic |
| CTAGGTTGAGGTATAAAGGA+GGG | 0.657817 | 4.2:+71554837 | MS.gene043158:CDS |
| GTGAAAGCCTAGCATCCATG+TGG | 0.660068 | 4.2:-71556710 | None:intergenic |
| GTATAAAGGAGGGAATAAGG+TGG | 0.662704 | 4.2:+71554847 | MS.gene043158:CDS |
| CAATCTTCATAGACCTAGTG+CGG | 0.663360 | 4.2:+71555705 | MS.gene043158:CDS |
| TTGATGTGGATTACCATATG+TGG | 0.664898 | 4.2:+71556451 | MS.gene043158:CDS |
| GCTAGGTTGAGGTATAAAGG+AGG | 0.666305 | 4.2:+71554836 | MS.gene043158:CDS |
| ATAGTCCTTTGGCTCCTCAG+TGG | 0.669744 | 4.2:+71555188 | MS.gene043158:CDS |
| AAGTCAGATGAGATTCACAA+GGG | 0.671394 | 4.2:+71555480 | MS.gene043158:CDS |
| ACTGATTCACGTCGAAGTGG+CGG | 0.671903 | 4.2:-71556417 | None:intergenic |
| ATGGAATGAGCAGTATACAT+GGG | 0.673909 | 4.2:+71556029 | MS.gene043158:CDS |
| GAATGAGCAGTATACATGGG+AGG | 0.691843 | 4.2:+71556032 | MS.gene043158:CDS |
| GGTCACTGCTACCATTGAGG+TGG | 0.693069 | 4.2:-71556101 | None:intergenic |
| ATACTGCTCATTCCATCTAG+GGG | 0.694930 | 4.2:-71556022 | None:intergenic |
| TCAAGAACAAGACATGAACA+AGG | 0.696192 | 4.2:-71556590 | None:intergenic |
| GACAGATTGAGAAGTGTGGG+AGG | 0.712782 | 4.2:+71556822 | MS.gene043158:CDS |
| AATCAACACTAACATAAACG+TGG | 0.721111 | 4.2:+71554466 | MS.gene043158:CDS |
| TGAACCCTAACAGAAGCTTG+TGG | 0.729603 | 4.2:-71555451 | None:intergenic |
| GGAGCCAAAGGACTATCCGG+CGG | 0.738578 | 4.2:-71555181 | None:intergenic |
| TCCTCCAATCTATACCACTG+AGG | 0.743340 | 4.2:-71555202 | None:intergenic |
| GAAAGCCTAGCATCCATGTG+GGG | 0.755803 | 4.2:-71556708 | None:intergenic |
| GGGAGGTAGAGTCCAAACTG+TGG | 0.795354 | 4.2:+71556839 | MS.gene043158:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAACTTTTCATTAAAATA+AGG | - | chr4.2:71554107-71554126 | None:intergenic | 10.0% |
| !!! | TTTCATTAAAATAAGGATTT+TGG | - | chr4.2:71554100-71554119 | None:intergenic | 15.0% |
| !! | ACAATTATAATATCCTCAAA+AGG | - | chr4.2:71555568-71555587 | None:intergenic | 20.0% |
| !! | AGAAAATTCTTCTTAGTATT+TGG | - | chr4.2:71554206-71554225 | None:intergenic | 20.0% |
| !! | ATAATTGCTATAAATTGGAA+TGG | - | chr4.2:71556984-71557003 | None:intergenic | 20.0% |
| !! | CAAAGTTTATTTGAACATAA+GGG | - | chr4.2:71554040-71554059 | None:intergenic | 20.0% |
| !! | CAACTATAATTGCTATAAAT+TGG | - | chr4.2:71556989-71557008 | None:intergenic | 20.0% |
| !! | CAATTTATAGCAATTATAGT+TGG | + | chr4.2:71556987-71557006 | MS.gene043158:CDS | 20.0% |
| !! | TCAAAGTTTATTTGAACATA+AGG | - | chr4.2:71554041-71554060 | None:intergenic | 20.0% |
| !!! | AATACTAAGAAGAATTTTCT+TGG | + | chr4.2:71554206-71554225 | MS.gene043158:CDS | 20.0% |
| ! | AACAAGTAAAGAAAAATGGT+TGG | - | chr4.2:71556645-71556664 | None:intergenic | 25.0% |
| ! | AATCTCTTGAAGAAATTAAC+TGG | - | chr4.2:71557062-71557081 | None:intergenic | 25.0% |
| ! | ATAGATTGGAGGATAAAAAA+GGG | + | chr4.2:71555212-71555231 | MS.gene043158:CDS | 25.0% |
| ! | ATCTGCATTAACATAACATT+TGG | - | chr4.2:71554764-71554783 | None:intergenic | 25.0% |
| ! | CACAAACAAGTAAAGAAAAA+TGG | - | chr4.2:71556649-71556668 | None:intergenic | 25.0% |
| ! | TATAGATTGGAGGATAAAAA+AGG | + | chr4.2:71555211-71555230 | MS.gene043158:CDS | 25.0% |
| ! | TATTATAATTGTGACAGTTG+AGG | + | chr4.2:71555576-71555595 | MS.gene043158:CDS | 25.0% |
| ! | TTCACATACAAAAAATGCAT+TGG | - | chr4.2:71554896-71554915 | None:intergenic | 25.0% |
| ! | TTCTTTACTTGTTTGTGATT+GGG | + | chr4.2:71556652-71556671 | MS.gene043158:CDS | 25.0% |
| ! | TTTCTTTACTTGTTTGTGAT+TGG | + | chr4.2:71556651-71556670 | MS.gene043158:CDS | 25.0% |
| !! | ATCAGTAAAGATGATTTTGT+TGG | + | chr4.2:71555118-71555137 | MS.gene043158:CDS | 25.0% |
| !! | TAAGAAGAATTTTCTTGGAA+AGG | + | chr4.2:71554211-71554230 | MS.gene043158:CDS | 25.0% |
| !! | TACTCATTATTATCCTCTTT+TGG | + | chr4.2:71556188-71556207 | MS.gene043158:CDS | 25.0% |
| !! | TTTTTCTTTTTCTGTTCCAA+TGG | - | chr4.2:71554576-71554595 | None:intergenic | 25.0% |
| !!! | ACTCTAAGATAATAAAGCTT+AGG | - | chr4.2:71555382-71555401 | None:intergenic | 25.0% |
| !!! | TAAAATAAGGATTTTGGTCT+TGG | - | chr4.2:71554094-71554113 | None:intergenic | 25.0% |
| !!! | TTAGTGTTGATTTCTTGTAA+AGG | - | chr4.2:71554458-71554477 | None:intergenic | 25.0% |
| AAAGGGATGAAGATAAATCA+TGG | + | chr4.2:71555229-71555248 | MS.gene043158:CDS | 30.0% | |
| AAGAGTTGAAACTCAAACAA+GGG | + | chr4.2:71554715-71554734 | MS.gene043158:CDS | 30.0% | |
| AATCAACACTAACATAAACG+TGG | + | chr4.2:71554466-71554485 | MS.gene043158:CDS | 30.0% | |
| CCTAACAATGTTGAAATCTT+GGG | + | chr4.2:71555610-71555629 | MS.gene043158:CDS | 30.0% | |
| GTTTATTTGAACATAAGGGT+TGG | - | chr4.2:71554036-71554055 | None:intergenic | 30.0% | |
| TCAGATCATTGTATCTGATT+TGG | - | chr4.2:71557090-71557109 | None:intergenic | 30.0% | |
| TCCTAACAATGTTGAAATCT+TGG | + | chr4.2:71555609-71555628 | MS.gene043158:CDS | 30.0% | |
| TGACATTATGCGATGAAAAT+TGG | - | chr4.2:71556496-71556515 | None:intergenic | 30.0% | |
| TGCATTAACATAACATTTGG+AGG | - | chr4.2:71554761-71554780 | None:intergenic | 30.0% | |
| TTTACTTGAAGTTACTGTGA+AGG | + | chr4.2:71555084-71555103 | MS.gene043158:CDS | 30.0% | |
| ! | AAGAAATTAACTGGTACTGA+TGG | - | chr4.2:71557053-71557072 | None:intergenic | 30.0% |
| ! | GGTTGAACATAATGCATTTT+GGG | - | chr4.2:71556321-71556340 | None:intergenic | 30.0% |
| ! | GTAAAGATGATTTTGTTGGT+AGG | + | chr4.2:71555122-71555141 | MS.gene043158:CDS | 30.0% |
| ! | GTTAGAACTTTTCATTCCAT+TGG | + | chr4.2:71554557-71554576 | MS.gene043158:CDS | 30.0% |
| !! | ATCATTGTATCTGATTTGGA+AGG | - | chr4.2:71557086-71557105 | None:intergenic | 30.0% |
| !! | CCTAATGGGTTAAAAAAGAA+TGG | + | chr4.2:71556219-71556238 | MS.gene043158:CDS | 30.0% |
| !!! | CCATTCTTTTTTAACCCATT+AGG | - | chr4.2:71556222-71556241 | None:intergenic | 30.0% |
| !!! | TTTTGGTTCTTCAACCTAAT+GGG | + | chr4.2:71556205-71556224 | MS.gene043158:CDS | 30.0% |
| AACATTGGATATCTCGAACT+CGG | + | chr4.2:71555877-71555896 | MS.gene043158:CDS | 35.0% | |
| AACCCATTTGTTTCCATACT+TGG | - | chr4.2:71555974-71555993 | None:intergenic | 35.0% | |
| AAGTCAGATGAGATTCACAA+GGG | + | chr4.2:71555480-71555499 | MS.gene043158:CDS | 35.0% | |
| AATTCCTCATCCAATTCATC+TGG | - | chr4.2:71556753-71556772 | None:intergenic | 35.0% | |
| ACAATGTTGAAATCTTGGGA+AGG | + | chr4.2:71555614-71555633 | MS.gene043158:CDS | 35.0% | |
| ACTTGTTTGTGATTGGGATT+TGG | + | chr4.2:71556658-71556677 | MS.gene043158:CDS | 35.0% | |
| AGTAACCTTGTTCCAAAAGA+TGG | + | chr4.2:71553999-71554018 | MS.gene043158:CDS | 35.0% | |
| AGTGATTGAAGCTCAAGATT+TGG | + | chr4.2:71555405-71555424 | MS.gene043158:CDS | 35.0% | |
| AGTTGAGTATATGCTTGATG+TGG | + | chr4.2:71556437-71556456 | MS.gene043158:CDS | 35.0% | |
| AGTTTGTCATCCAGATGAAT+TGG | + | chr4.2:71556740-71556759 | MS.gene043158:CDS | 35.0% | |
| ATAAGAATCAGCATCCTGTT+TGG | + | chr4.2:71555020-71555039 | MS.gene043158:CDS | 35.0% | |
| ATGGAATGAGCAGTATACAT+GGG | + | chr4.2:71556029-71556048 | MS.gene043158:CDS | 35.0% | |
| ATTACCATATGTGGAGTCTA+AGG | + | chr4.2:71556460-71556479 | MS.gene043158:CDS | 35.0% | |
| CAAAGATCAGAGAATTGGAA+AGG | + | chr4.2:71556125-71556144 | MS.gene043158:CDS | 35.0% | |
| CAAGAGTTGAAACTCAAACA+AGG | + | chr4.2:71554714-71554733 | MS.gene043158:CDS | 35.0% | |
| CAAGTTTCACTTCCACATAA+GGG | - | chr4.2:71554970-71554989 | None:intergenic | 35.0% | |
| CAATGTTGAAATCTTGGGAA+GGG | + | chr4.2:71555615-71555634 | MS.gene043158:CDS | 35.0% | |
| CATATTCTGGATTCTGCTTT+GGG | - | chr4.2:71554787-71554806 | None:intergenic | 35.0% | |
| CCCAAGATTTCAACATTGTT+AGG | - | chr4.2:71555613-71555632 | None:intergenic | 35.0% | |
| CTGGATTCAGATTCAGATAT+AGG | - | chr4.2:71554260-71554279 | None:intergenic | 35.0% | |
| CTTGAACCATGATTAACAGA+AGG | - | chr4.2:71554674-71554693 | None:intergenic | 35.0% | |
| CTTGTTCCAAAAGATGGAAA+AGG | + | chr4.2:71554005-71554024 | MS.gene043158:CDS | 35.0% | |
| GAAAAACCTTCTCATTCTCA+TGG | + | chr4.2:71554590-71554609 | MS.gene043158:CDS | 35.0% | |
| GAACAAGGCAAGTTGTAATT+GGG | - | chr4.2:71556578-71556597 | None:intergenic | 35.0% | |
| GAATTGGAAAGGTGAGAATA+AGG | + | chr4.2:71556136-71556155 | MS.gene043158:CDS | 35.0% | |
| GTAAAGGAATTTCCTCATCA+GGG | - | chr4.2:71554442-71554461 | None:intergenic | 35.0% | |
| GTTTGATCTTAATGAAGTGC+CGG | + | chr4.2:71555150-71555169 | MS.gene043158:CDS | 35.0% | |
| TACCCTCTTGAACATTCAAA+AGG | + | chr4.2:71554290-71554309 | MS.gene043158:CDS | 35.0% | |
| TACCTGTTAGACACATTGAT+TGG | + | chr4.2:71556343-71556362 | MS.gene043158:CDS | 35.0% | |
| TATACTGCTCATTCCATCTA+GGG | - | chr4.2:71556026-71556045 | None:intergenic | 35.0% | |
| TCAAGAACAAGACATGAACA+AGG | - | chr4.2:71556593-71556612 | None:intergenic | 35.0% | |
| TCAATGTGTCTAACAGGTAT+CGG | - | chr4.2:71556342-71556361 | None:intergenic | 35.0% | |
| TGAACAAGGCAAGTTGTAAT+TGG | - | chr4.2:71556579-71556598 | None:intergenic | 35.0% | |
| TGCCAAGTATGGAAACAAAT+GGG | + | chr4.2:71555969-71555988 | MS.gene043158:CDS | 35.0% | |
| TGTAAAGGAATTTCCTCATC+AGG | - | chr4.2:71554443-71554462 | None:intergenic | 35.0% | |
| TTCCAATTCTCTGATCTTTG+TGG | - | chr4.2:71556125-71556144 | None:intergenic | 35.0% | |
| TTGCCAAGTATGGAAACAAA+TGG | + | chr4.2:71555968-71555987 | MS.gene043158:CDS | 35.0% | |
| ! | AGGGTTGATTATGCAAAATC+AGG | + | chr4.2:71554734-71554753 | MS.gene043158:CDS | 35.0% |
| ! | CACCTTTTGAATGTTCAAGA+GGG | - | chr4.2:71554295-71554314 | None:intergenic | 35.0% |
| ! | CGGTTGAACATAATGCATTT+TGG | - | chr4.2:71556322-71556341 | None:intergenic | 35.0% |
| ! | CTTGTTTGAGTTTCAACTCT+TGG | - | chr4.2:71554716-71554735 | None:intergenic | 35.0% |
| ! | GATTTGGTTCCTCATGATAA+AGG | + | chr4.2:71555421-71555440 | MS.gene043158:CDS | 35.0% |
| ! | GCTTTTCCTTCTGTTAATCA+TGG | + | chr4.2:71554665-71554684 | MS.gene043158:CDS | 35.0% |
| ! | GTGAAACTTGGTAACTACAA+AGG | + | chr4.2:71554980-71554999 | MS.gene043158:CDS | 35.0% |
| ! | GTTTTACTGCTGTGTGTAAA+TGG | + | chr4.2:71556526-71556545 | MS.gene043158:CDS | 35.0% |
| ! | GTTTTTGCTTGTGAATGTTG+TGG | - | chr4.2:71554392-71554411 | None:intergenic | 35.0% |
| ! | TAGGAGGTGTATTAGCAAAA+GGG | - | chr4.2:71554349-71554368 | None:intergenic | 35.0% |
| ! | TCACCTTTTGAATGTTCAAG+AGG | - | chr4.2:71554296-71554315 | None:intergenic | 35.0% |
| ! | TGATTGGGATTTGGAATTAC+CGG | + | chr4.2:71556667-71556686 | MS.gene043158:CDS | 35.0% |
| ! | TTGATGTGGATTACCATATG+TGG | + | chr4.2:71556451-71556470 | MS.gene043158:CDS | 35.0% |
| !! | AATTATGCTTGCTGTTTGGA+TGG | + | chr4.2:71555255-71555274 | MS.gene043158:CDS | 35.0% |
| !! | ACTCTTGGTGTTTCAAAAGA+TGG | - | chr4.2:71554701-71554720 | None:intergenic | 35.0% |
| !! | ATTATGCTTGCTGTTTGGAT+GGG | + | chr4.2:71555256-71555275 | MS.gene043158:CDS | 35.0% |
| !! | GTGAAATTATGCTTGCTGTT+TGG | + | chr4.2:71555251-71555270 | MS.gene043158:CDS | 35.0% |
| !! | TAATGCATTTTGGGAAGCAA+AGG | - | chr4.2:71556312-71556331 | None:intergenic | 35.0% |
| !! | TTAGGTTGAAGAACCAAAAG+AGG | - | chr4.2:71556204-71556223 | None:intergenic | 35.0% |
| !!! | CTTTTCCATCTTTTGGAACA+AGG | - | chr4.2:71554007-71554026 | None:intergenic | 35.0% |
| !!! | CTTTTGGTTCTTCAACCTAA+TGG | + | chr4.2:71556204-71556223 | MS.gene043158:CDS | 35.0% |
| AAGAGGGTAACGTTTGATAC+TGG | - | chr4.2:71554279-71554298 | None:intergenic | 40.0% | |
| ACAAGGGTTTCTCAAATGAG+AGG | + | chr4.2:71555496-71555515 | MS.gene043158:CDS | 40.0% | |
| ACATTGGATATCTCGAACTC+GGG | + | chr4.2:71555878-71555897 | MS.gene043158:CDS | 40.0% | |
| AGCAAAAGAACTTCCTGTGA+TGG | + | chr4.2:71554925-71554944 | MS.gene043158:CDS | 40.0% | |
| AGCCAATCAATGTGTCTAAC+AGG | - | chr4.2:71556348-71556367 | None:intergenic | 40.0% | |
| AGTTCCACAAGCTTCTGTTA+GGG | + | chr4.2:71555447-71555466 | MS.gene043158:CDS | 40.0% | |
| ATAAGCTCCTCGTTCCAAAT+AGG | - | chr4.2:71555529-71555548 | None:intergenic | 40.0% | |
| ATACTGCTCATTCCATCTAG+GGG | - | chr4.2:71556025-71556044 | None:intergenic | 40.0% | |
| ATGGTTGGCAGTATCAATTC+AGG | - | chr4.2:71556630-71556649 | None:intergenic | 40.0% | |
| CAATCTTCATAGACCTAGTG+CGG | + | chr4.2:71555705-71555724 | MS.gene043158:CDS | 40.0% | |
| CACTTGAGGAGGAAAAACAT+TGG | + | chr4.2:71555862-71555881 | MS.gene043158:CDS | 40.0% | |
| CATCATCTTCTCACTGATCT+GGG | + | chr4.2:71556938-71556957 | MS.gene043158:CDS | 40.0% | |
| CCAAGTTTCACTTCCACATA+AGG | - | chr4.2:71554971-71554990 | None:intergenic | 40.0% | |
| CCTTATGTGGAAGTGAAACT+TGG | + | chr4.2:71554968-71554987 | MS.gene043158:CDS | 40.0% | |
| CCTTCATAGGTAGCAAATTC+CGG | - | chr4.2:71555915-71555934 | None:intergenic | 40.0% | |
| CTAAATCTCCAACCACAGTT+TGG | - | chr4.2:71556854-71556873 | None:intergenic | 40.0% | |
| CTCATTCGAACAATATCAGC+AGG | - | chr4.2:71556798-71556817 | None:intergenic | 40.0% | |
| CTGCTGATATTGTTCGAATG+AGG | + | chr4.2:71556796-71556815 | MS.gene043158:CDS | 40.0% | |
| CTTCATAGGTAGCAAATTCC+GGG | - | chr4.2:71555914-71555933 | None:intergenic | 40.0% | |
| CTTCCTGTTATATCCATCAC+AGG | - | chr4.2:71554941-71554960 | None:intergenic | 40.0% | |
| CTTGGAAAGGTGAGAATTTC+AGG | + | chr4.2:71554224-71554243 | MS.gene043158:CDS | 40.0% | |
| GAAGTCAGATGAGATTCACA+AGG | + | chr4.2:71555479-71555498 | MS.gene043158:CDS | 40.0% | |
| GAATCCAGAATATGCATTGG+TGG | + | chr4.2:71554793-71554812 | MS.gene043158:CDS | 40.0% | |
| GACCACAAAGATCAGAGAAT+TGG | + | chr4.2:71556120-71556139 | MS.gene043158:CDS | 40.0% | |
| GAGAAATGTTCCGCAAAGAT+TGG | + | chr4.2:71555651-71555670 | MS.gene043158:CDS | 40.0% | |
| GAGGTATAAAGGAGGGAATA+AGG | + | chr4.2:71554844-71554863 | MS.gene043158:CDS | 40.0% | |
| GATGGAATGAGCAGTATACA+TGG | + | chr4.2:71556028-71556047 | MS.gene043158:CDS | 40.0% | |
| GCAGAATCCAGAATATGCAT+TGG | + | chr4.2:71554790-71554809 | MS.gene043158:CDS | 40.0% | |
| GCATATTCTGGATTCTGCTT+TGG | - | chr4.2:71554788-71554807 | None:intergenic | 40.0% | |
| GCTCACAAAACAGTTGAAGT+TGG | + | chr4.2:71554155-71554174 | MS.gene043158:CDS | 40.0% | |
| GGAACTCTTCCTTTATCATG+AGG | - | chr4.2:71555433-71555452 | None:intergenic | 40.0% | |
| GTATAAAGGAGGGAATAAGG+TGG | + | chr4.2:71554847-71554866 | MS.gene043158:CDS | 40.0% | |
| GTATACTGCTCATTCCATCT+AGG | - | chr4.2:71556027-71556046 | None:intergenic | 40.0% | |
| GTGACAGTTGAGGACAAATT+TGG | + | chr4.2:71555586-71555605 | MS.gene043158:CDS | 40.0% | |
| GTTTCCACCAATGCATATTC+TGG | - | chr4.2:71554800-71554819 | None:intergenic | 40.0% | |
| TAAGCTCCTCGTTCCAAATA+GGG | - | chr4.2:71555528-71555547 | None:intergenic | 40.0% | |
| TCATCATCTTCTCACTGATC+TGG | + | chr4.2:71556937-71556956 | MS.gene043158:CDS | 40.0% | |
| TCATCCAGATGAATTGGATG+AGG | + | chr4.2:71556746-71556765 | MS.gene043158:CDS | 40.0% | |
| TCATCTCCGAATTTGTCTTG+AGG | + | chr4.2:71555777-71555796 | MS.gene043158:CDS | 40.0% | |
| TCGCATAATGTCACTACTCT+CGG | + | chr4.2:71556503-71556522 | MS.gene043158:CDS | 40.0% | |
| TGGTTGGCAGTATCAATTCA+GGG | - | chr4.2:71556629-71556648 | None:intergenic | 40.0% | |
| TTCTCCTTAGACTCCACATA+TGG | - | chr4.2:71556467-71556486 | None:intergenic | 40.0% | |
| TTGCACAGCTTGGGTTAATA+TGG | + | chr4.2:71556269-71556288 | MS.gene043158:CDS | 40.0% | |
| TTTGACAATCACCACCTCAA+TGG | + | chr4.2:71556090-71556109 | MS.gene043158:CDS | 40.0% | |
| TTTGCTTGTGAATGTTGTGG+AGG | - | chr4.2:71554389-71554408 | None:intergenic | 40.0% | |
| ! | ATATCAGCAGGTCTTGTAGT+TGG | - | chr4.2:71556786-71556805 | None:intergenic | 40.0% |
| ! | CTAGGTTGAGGTATAAAGGA+GGG | + | chr4.2:71554837-71554856 | MS.gene043158:CDS | 40.0% |
| ! | CTTTAACCCTATTTGGAACG+AGG | + | chr4.2:71555519-71555538 | MS.gene043158:CDS | 40.0% |
| ! | GCAAAGATTTGCTTCCAAAC+AGG | - | chr4.2:71555037-71555056 | None:intergenic | 40.0% |
| ! | GCAAATCTTTGCGTTTTCGA+AGG | + | chr4.2:71555045-71555064 | MS.gene043158:CDS | 40.0% |
| ! | GCTGAACCTTTTCCATCTTT+TGG | - | chr4.2:71554014-71554033 | None:intergenic | 40.0% |
| ! | GTAGGAGGTGTATTAGCAAA+AGG | - | chr4.2:71554350-71554369 | None:intergenic | 40.0% |
| ! | TACGACAGATTGAGAAGTGT+GGG | + | chr4.2:71556819-71556838 | MS.gene043158:CDS | 40.0% |
| ! | TGAGAGGCTTTAACCCTATT+TGG | + | chr4.2:71555512-71555531 | MS.gene043158:CDS | 40.0% |
| !! | ATCTTAATGAAGTGCCGGTT+AGG | + | chr4.2:71555155-71555174 | MS.gene043158:CDS | 40.0% |
| !! | CGGAATTTGCTACCTATGAA+GGG | + | chr4.2:71555913-71555932 | MS.gene043158:CDS | 40.0% |
| !! | CTTCCTGTGATGGATATAAC+AGG | + | chr4.2:71554935-71554954 | MS.gene043158:CDS | 40.0% |
| !! | TCTTAATGAAGTGCCGGTTA+GGG | + | chr4.2:71555156-71555175 | MS.gene043158:CDS | 40.0% |
| !!! | AGGATTTTGGTCTTGGTGTT+TGG | - | chr4.2:71554087-71554106 | None:intergenic | 40.0% |
| AAAGAATGGAGAGCTGCACT+TGG | + | chr4.2:71556233-71556252 | MS.gene043158:CDS | 45.0% | |
| AACCGTCTTCGAAACACTTG+AGG | + | chr4.2:71555848-71555867 | MS.gene043158:CDS | 45.0% | |
| ACAGAAGGAAAAGCAGAAGC+AGG | - | chr4.2:71554659-71554678 | None:intergenic | 45.0% | |
| ACCCTGCCTCAAGACAAATT+CGG | - | chr4.2:71555786-71555805 | None:intergenic | 45.0% | |
| AGATTGAACCAACGAGCATC+CGG | - | chr4.2:71555691-71555710 | None:intergenic | 45.0% | |
| AGGAAGTCTTGACCCTTATG+TGG | + | chr4.2:71554955-71554974 | MS.gene043158:CDS | 45.0% | |
| CATTCTCATGGTCATGGTCA+TGG | + | chr4.2:71554602-71554621 | MS.gene043158:CDS | 45.0% | |
| CCATGACCATGAGAATGAGA+AGG | - | chr4.2:71554599-71554618 | None:intergenic | 45.0% | |
| CCTTCTCATTCTCATGGTCA+TGG | + | chr4.2:71554596-71554615 | MS.gene043158:CDS | 45.0% | |
| CGCATAATGTCACTACTCTC+GGG | + | chr4.2:71556504-71556523 | MS.gene043158:CDS | 45.0% | |
| CTAACTGTGATCACAGTGCA+TGG | - | chr4.2:71556066-71556085 | None:intergenic | 45.0% | |
| CTACCATCTTTGCCCTTCAT+AGG | - | chr4.2:71555928-71555947 | None:intergenic | 45.0% | |
| CTACCTATGAAGGGCAAAGA+TGG | + | chr4.2:71555922-71555941 | MS.gene043158:CDS | 45.0% | |
| CTCCTCAAGTGTTTCGAAGA+CGG | - | chr4.2:71555853-71555872 | None:intergenic | 45.0% | |
| CTTGGGAAGGGAGATTATGT+CGG | + | chr4.2:71555627-71555646 | MS.gene043158:CDS | 45.0% | |
| CTTGTGAATGTTGTGGAGGA+GGG | - | chr4.2:71554385-71554404 | None:intergenic | 45.0% | |
| GAACGAGGAGCTTATGTTTG+TGG | + | chr4.2:71555534-71555553 | MS.gene043158:CDS | 45.0% | |
| GAATGAGCAGTATACATGGG+AGG | + | chr4.2:71556032-71556051 | MS.gene043158:CDS | 45.0% | |
| GAGCTCAAGCTTTACTGAGT+TGG | + | chr4.2:71556889-71556908 | MS.gene043158:CDS | 45.0% | |
| GAGGTTTACTTGCACAGCTT+GGG | + | chr4.2:71556260-71556279 | MS.gene043158:CDS | 45.0% | |
| GAGTTCCACAAGCTTCTGTT+AGG | + | chr4.2:71555446-71555465 | MS.gene043158:CDS | 45.0% | |
| GCATACTGTGTTGCCAAGTA+TGG | + | chr4.2:71555958-71555977 | MS.gene043158:CDS | 45.0% | |
| GGAAGAAACGGAGAGAAAGA+AGG | + | chr4.2:71555735-71555754 | MS.gene043158:CDS | 45.0% | |
| GGCTTAACGACATTTGCACT+TGG | + | chr4.2:71556547-71556566 | MS.gene043158:CDS | 45.0% | |
| GTACGACAGATTGAGAAGTG+TGG | + | chr4.2:71556818-71556837 | MS.gene043158:CDS | 45.0% | |
| GTTGGAGATTTAGCCACTCA+AGG | + | chr4.2:71556861-71556880 | MS.gene043158:CDS | 45.0% | |
| TCCGAATTTGTCTTGAGGCA+GGG | + | chr4.2:71555782-71555801 | MS.gene043158:CDS | 45.0% | |
| TCCTCAGTGGTATAGATTGG+AGG | + | chr4.2:71555201-71555220 | MS.gene043158:CDS | 45.0% | |
| TCCTCCAATCTATACCACTG+AGG | - | chr4.2:71555205-71555224 | None:intergenic | 45.0% | |
| TGAAAGCCTAGCATCCATGT+GGG | - | chr4.2:71556712-71556731 | None:intergenic | 45.0% | |
| TGAACCCTAACAGAAGCTTG+TGG | - | chr4.2:71555454-71555473 | None:intergenic | 45.0% | |
| TGAGGTTTACTTGCACAGCT+TGG | + | chr4.2:71556259-71556278 | MS.gene043158:CDS | 45.0% | |
| TTTCCGGTCTCCAATCTTTG+CGG | - | chr4.2:71555664-71555683 | None:intergenic | 45.0% | |
| ! | ACTGAGTTGGAGAGACTCAA+GGG | + | chr4.2:71556902-71556921 | MS.gene043158:CDS | 45.0% |
| ! | AGCTGATGAGTCTTTTCCTG+AGG | + | chr4.2:71555285-71555304 | MS.gene043158:CDS | 45.0% |
| ! | ATGAGTCTTTTCCTGAGGCA+TGG | + | chr4.2:71555290-71555309 | MS.gene043158:CDS | 45.0% |
| ! | GCAGCTAGGTTGAGGTATAA+AGG | + | chr4.2:71554833-71554852 | MS.gene043158:CDS | 45.0% |
| ! | GCTAGGTTGAGGTATAAAGG+AGG | + | chr4.2:71554836-71554855 | MS.gene043158:CDS | 45.0% |
| ! | TACTGAGTTGGAGAGACTCA+AGG | + | chr4.2:71556901-71556920 | MS.gene043158:CDS | 45.0% |
| ! | TCAACTGATTCACGTCGAAG+TGG | - | chr4.2:71556423-71556442 | None:intergenic | 45.0% |
| ! | TCTTTGCGTTTTCGAAGGAG+AGG | + | chr4.2:71555050-71555069 | MS.gene043158:CDS | 45.0% |
| !! | CCGGAATTTGCTACCTATGA+AGG | + | chr4.2:71555912-71555931 | MS.gene043158:CDS | 45.0% |
| !! | GGATTTGGAATTACCGGTTC+CGG | + | chr4.2:71556673-71556692 | MS.gene043158:CDS | 45.0% |
| AACTCGGGATACTTAGTGCC+CGG | + | chr4.2:71555893-71555912 | MS.gene043158:CDS | 50.0% | |
| ATTGGAGACCGGAAAGCTTC+CGG | + | chr4.2:71555669-71555688 | MS.gene043158:CDS | 50.0% | |
| ATTTGAGCCTGACCCTGATG+AGG | + | chr4.2:71554427-71554446 | MS.gene043158:CDS | 50.0% | |
| CAATCTGCATGGCCTGATAG+CGG | - | chr4.2:71556371-71556390 | None:intergenic | 50.0% | |
| CATGGATGCTAGGCTTTCAC+AGG | + | chr4.2:71556713-71556732 | MS.gene043158:CDS | 50.0% | |
| CGTCTTCGAAACACTTGAGG+AGG | + | chr4.2:71555851-71555870 | MS.gene043158:CDS | 50.0% | |
| CTATACCACTGAGGAGCCAA+AGG | - | chr4.2:71555196-71555215 | None:intergenic | 50.0% | |
| CTATCAGGCCATGCAGATTG+TGG | + | chr4.2:71556371-71556390 | MS.gene043158:CDS | 50.0% | |
| CTCCGAATTTGTCTTGAGGC+AGG | + | chr4.2:71555781-71555800 | MS.gene043158:CDS | 50.0% | |
| CTTCATAGACCTAGTGCGGT+CGG | + | chr4.2:71555709-71555728 | MS.gene043158:CDS | 50.0% | |
| GAAAGCCTAGCATCCATGTG+GGG | - | chr4.2:71556711-71556730 | None:intergenic | 50.0% | |
| GCTTCTGTTAGGGTTCAGCT+AGG | + | chr4.2:71555457-71555476 | MS.gene043158:CDS | 50.0% | |
| GCTTGTGAATGTTGTGGAGG+AGG | - | chr4.2:71554386-71554405 | None:intergenic | 50.0% | |
| GGAATTTCCTCATCAGGGTC+AGG | - | chr4.2:71554437-71554456 | None:intergenic | 50.0% | |
| GGAGGGTGAGAATTAGGTGT+AGG | - | chr4.2:71554368-71554387 | None:intergenic | 50.0% | |
| GGCTCCTCAGTGGTATAGAT+TGG | + | chr4.2:71555198-71555217 | MS.gene043158:CDS | 50.0% | |
| GGGTGAGAATTAGGTGTAGG+AGG | - | chr4.2:71554365-71554384 | None:intergenic | 50.0% | |
| GGTAGAGTCCAAACTGTGGT+TGG | + | chr4.2:71556843-71556862 | MS.gene043158:CDS | 50.0% | |
| GTGAAAGCCTAGCATCCATG+TGG | - | chr4.2:71556713-71556732 | None:intergenic | 50.0% | |
| GTTCCGCAAAGATTGGAGAC+CGG | + | chr4.2:71555658-71555677 | MS.gene043158:CDS | 50.0% | |
| TACCTCAACCTAGCTGCAAG+TGG | - | chr4.2:71554830-71554849 | None:intergenic | 50.0% | |
| TCTTCATGCTGCGTCATCCT+CGG | + | chr4.2:71557012-71557031 | MS.gene043158:CDS | 50.0% | |
| TGAGGAGCCAAAGGACTATC+CGG | - | chr4.2:71555187-71555206 | None:intergenic | 50.0% | |
| TGTGGAGGAGGGTGAGAATT+AGG | - | chr4.2:71554374-71554393 | None:intergenic | 50.0% | |
| TGTGGTCACTGCTACCATTG+AGG | - | chr4.2:71556107-71556126 | None:intergenic | 50.0% | |
| TTCATAGACCTAGTGCGGTC+GGG | + | chr4.2:71555710-71555729 | MS.gene043158:CDS | 50.0% | |
| TTGACACACTGTCCCCTAGA+TGG | + | chr4.2:71556010-71556029 | MS.gene043158:CDS | 50.0% | |
| TTGAGCTCTTTCGCCTTGAG+TGG | - | chr4.2:71556877-71556896 | None:intergenic | 50.0% | |
| ! | ACTGATTCACGTCGAAGTGG+CGG | - | chr4.2:71556420-71556439 | None:intergenic | 50.0% |
| ! | ATAGTCCTTTGGCTCCTCAG+TGG | + | chr4.2:71555188-71555207 | MS.gene043158:CDS | 50.0% |
| ! | CATTGATTGGCTCCGCTATC+AGG | + | chr4.2:71556356-71556375 | MS.gene043158:CDS | 50.0% |
| ! | GACAGATTGAGAAGTGTGGG+AGG | + | chr4.2:71556822-71556841 | MS.gene043158:CDS | 50.0% |
| ! | GGCAATTTGCTTCGAAACCG+AGG | - | chr4.2:71557032-71557051 | None:intergenic | 50.0% |
| ! | TGTGGCAGCTGAACCTTTTG+AGG | + | chr4.2:71555552-71555571 | MS.gene043158:CDS | 50.0% |
| ACGAGCATCCGGAAGCTTTC+CGG | - | chr4.2:71555680-71555699 | None:intergenic | 55.0% | |
| ATCCACCCCACATGGATGCT+AGG | + | chr4.2:71556703-71556722 | MS.gene043158:CDS | 55.0% | |
| CACCACTTGCAGCTAGGTTG+AGG | + | chr4.2:71554825-71554844 | MS.gene043158:CDS | 55.0% | |
| CCATGCAGATTGTGGCAGCA+AGG | + | chr4.2:71556379-71556398 | MS.gene043158:CDS | 55.0% | |
| CCTCTCGAATACGCGATCGA+AGG | + | chr4.2:71555345-71555364 | MS.gene043158:CDS | 55.0% | |
| CCTTCGATCGCGTATTCGAG+AGG | - | chr4.2:71555348-71555367 | None:intergenic | 55.0% | |
| CCTTGCTGCCACAATCTGCA+TGG | - | chr4.2:71556382-71556401 | None:intergenic | 55.0% | |
| CTCAACCTAGCTGCAAGTGG+TGG | - | chr4.2:71554827-71554846 | None:intergenic | 55.0% | |
| GAAAGCTTCCGGATGCTCGT+TGG | + | chr4.2:71555680-71555699 | MS.gene043158:CDS | 55.0% | |
| GCATCAGAATGCCATGCCTC+AGG | - | chr4.2:71555304-71555323 | None:intergenic | 55.0% | |
| GGAAAAGCAGAAGCAGGAGC+AGG | - | chr4.2:71554653-71554672 | None:intergenic | 55.0% | |
| GGGAGGTAGAGTCCAAACTG+TGG | + | chr4.2:71556839-71556858 | MS.gene043158:CDS | 55.0% | |
| GGTCACTGCTACCATTGAGG+TGG | - | chr4.2:71556104-71556123 | None:intergenic | 55.0% | |
| TCATAGACCTAGTGCGGTCG+GGG | + | chr4.2:71555711-71555730 | MS.gene043158:CDS | 55.0% | |
| ! | TCCATGTGGGGTGGATTCCT+TGG | - | chr4.2:71556699-71556718 | None:intergenic | 55.0% |
| AGCCTAGCATCCATGTGGGG+TGG | - | chr4.2:71556708-71556727 | None:intergenic | 60.0% | |
| CAGCTCCACCACTTGCAGCT+AGG | + | chr4.2:71554819-71554838 | MS.gene043158:CDS | 60.0% | |
| CTATCCGGCGGAACCCTAAC+CGG | - | chr4.2:71555172-71555191 | None:intergenic | 60.0% | |
| GAGAGCTGCACTTGGCTGTG+AGG | + | chr4.2:71556241-71556260 | MS.gene043158:CDS | 60.0% | |
| GCCAAGGAATCCACCCCACA+TGG | + | chr4.2:71556695-71556714 | MS.gene043158:CDS | 60.0% | |
| GGAGCCAAAGGACTATCCGG+CGG | - | chr4.2:71555184-71555203 | None:intergenic | 60.0% | |
| GGTTCCGCCGGATAGTCCTT+TGG | + | chr4.2:71555177-71555196 | MS.gene043158:CDS | 60.0% | |
| GTGGATTCCTTGGCCGGAAC+CGG | - | chr4.2:71556689-71556708 | None:intergenic | 60.0% | |
| TGCGGTCGGGGAGGAAGAAA+CGG | + | chr4.2:71555723-71555742 | MS.gene043158:CDS | 60.0% | |
| ! | TGTGGGGTGGATTCCTTGGC+CGG | - | chr4.2:71556695-71556714 | None:intergenic | 60.0% |
| !! | GGAATTACCGGTTCCGGCCA+AGG | + | chr4.2:71556679-71556698 | MS.gene043158:CDS | 60.0% |
| GCAGAAGCAGGAGCAGGAGC+AGG | - | chr4.2:71554647-71554666 | None:intergenic | 65.0% | |
| TAGACCTAGTGCGGTCGGGG+AGG | + | chr4.2:71555714-71555733 | MS.gene043158:CDS | 65.0% | |
| TCTTCCTCCCCGACCGCACT+AGG | - | chr4.2:71555721-71555740 | None:intergenic | 65.0% | |
| !! | AGTGCCGGTTAGGGTTCCGC+CGG | + | chr4.2:71555165-71555184 | MS.gene043158:CDS | 65.0% |
| GCAGGAGCAGGAGCAGGAGC+AGG | - | chr4.2:71554629-71554648 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 71553966 | 71557109 | 71553966 | ID=MS.gene043158 |
| chr4.2 | mRNA | 71553966 | 71557109 | 71553966 | ID=MS.gene043158.t1;Parent=MS.gene043158 |
| chr4.2 | exon | 71553966 | 71557109 | 71553966 | ID=MS.gene043158.t1.exon1;Parent=MS.gene043158.t1 |
| chr4.2 | CDS | 71553966 | 71557109 | 71553966 | ID=cds.MS.gene043158.t1;Parent=MS.gene043158.t1 |
| Gene Sequence |
| Protein sequence |
