AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene045063

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene045063.t1 MTR_3g088150 96.939 490 15 0 1 490 1 490 0.0 984
MS.gene045063.t1 MTR_1g029840 78.261 483 105 0 8 490 6 488 0.0 809
MS.gene045063.t1 MTR_1g029840 77.963 481 106 0 10 490 8 488 0.0 802
MS.gene045063.t1 MTR_8g094600 66.122 490 166 0 1 490 52 541 0.0 706
MS.gene045063.t1 MTR_8g076480 47.548 469 246 0 15 483 6 474 1.08e-165 477
MS.gene045063.t1 MTR_2g097950 46.764 479 252 1 13 488 15 493 1.70e-159 462
MS.gene045063.t1 MTR_4g065040 50.881 454 220 1 22 472 9 462 4.20e-146 427
MS.gene045063.t1 MTR_2g097950 44.328 476 233 2 13 488 15 458 5.67e-144 421
MS.gene045063.t1 MTR_1222s0010 36.387 382 231 5 19 396 6 379 1.04e-77 258
MS.gene045063.t1 MTR_1314s0010 35.799 338 207 4 118 447 1 336 6.68e-71 229
MS.gene045063.t1 MTR_3g078550 29.954 434 285 9 27 447 28 455 4.66e-40 150
MS.gene045063.t1 MTR_3g078550 29.954 434 285 9 27 447 58 485 8.06e-40 150
MS.gene045063.t1 MTR_4g106510 29.017 417 282 9 40 447 74 485 3.38e-39 149
MS.gene045063.t1 MTR_2g034160 24.777 448 307 8 36 467 106 539 5.47e-39 149
MS.gene045063.t1 MTR_3g078490 29.263 434 288 10 27 447 88 515 1.11e-37 145
MS.gene045063.t1 MTR_2g067660 27.874 348 242 8 114 455 178 522 7.89e-33 131
MS.gene045063.t1 MTR_8g064170 26.790 433 299 11 26 448 108 532 6.80e-30 123
MS.gene045063.t1 MTR_4g107040 26.770 452 299 13 14 448 99 535 7.99e-29 120
MS.gene045063.t1 MTR_8g083530 28.070 342 230 9 117 448 159 494 2.13e-27 115
MS.gene045063.t1 MTR_3g078170 27.212 452 297 14 14 448 97 533 6.18e-27 114
MS.gene045063.t1 MTR_4g131180 28.743 334 229 7 118 448 158 485 5.87e-26 110
MS.gene045063.t1 MTR_6g086300 28.319 339 233 8 117 448 158 493 5.96e-25 108
MS.gene045063.t1 MTR_6g086300 28.319 339 233 8 117 448 158 493 5.96e-25 108
MS.gene045063.t1 MTR_6g086340 27.515 338 235 8 117 447 156 490 7.30e-24 104
MS.gene045063.t1 MTR_1g014320 25.000 460 318 12 5 448 37 485 2.32e-23 103
MS.gene045063.t1 MTR_4g131180 28.912 294 201 6 118 408 158 446 1.15e-22 101
MS.gene045063.t1 MTR_8g064170 24.884 430 279 13 26 448 108 500 8.65e-22 98.6
MS.gene045063.t1 MTR_3g078490 29.310 290 196 6 27 309 58 345 4.63e-19 89.0
MS.gene045063.t1 MTR_2g009750 28.710 310 195 11 115 408 147 446 1.66e-18 88.6
MS.gene045063.t1 MTR_2g009750 28.710 310 195 11 115 408 146 445 1.76e-18 88.6
MS.gene045063.t1 MTR_2g009750 28.710 310 196 10 115 408 147 447 2.75e-18 87.8
MS.gene045063.t1 MTR_4g093170 27.036 307 205 8 115 408 174 474 3.13e-18 87.8
MS.gene045063.t1 MTR_3g078170 27.049 366 237 13 14 362 97 449 9.45e-18 85.9
MS.gene045063.t1 MTR_8g083520 26.163 344 201 10 117 448 150 452 2.86e-17 84.7
MS.gene045063.t1 MTR_8g083520 26.163 344 201 10 117 448 70 372 3.59e-17 83.6
MS.gene045063.t1 MTR_4g020710 48.684 76 39 0 295 370 8 83 6.15e-17 77.8
MS.gene045063.t1 MTR_4g020720 39.200 125 67 4 185 303 116 237 3.05e-16 79.3
MS.gene045063.t1 MTR_3g078170 30.769 260 148 10 14 253 97 344 1.94e-14 75.5
MS.gene045063.t1 MTR_3g078170 30.769 260 148 10 14 253 97 344 2.32e-14 75.5
MS.gene045063.t1 MTR_8g083530 35.762 151 88 5 117 261 159 306 1.82e-13 72.4
MS.gene045063.t1 MTR_1399s0020 27.830 212 143 5 254 463 145 348 3.38e-13 71.2
MS.gene045063.t1 MTR_2g042330 25.685 292 194 12 118 393 155 439 4.65e-13 71.6
MS.gene045063.t1 MTR_1690s0010 27.801 241 153 10 89 314 111 345 6.26e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene045063.t1 AT1G44170 68.058 479 153 0 10 488 4 482 0.0 704
MS.gene045063.t1 AT1G44170 68.058 479 153 0 10 488 4 482 0.0 704
MS.gene045063.t1 AT4G34240 64.644 478 169 0 13 490 70 547 0.0 647
MS.gene045063.t1 AT4G34240 64.644 478 169 0 13 490 55 532 0.0 647
MS.gene045063.t1 AT1G44170 70.560 411 121 0 78 488 9 419 0.0 634
MS.gene045063.t1 AT4G34240 67.574 404 131 0 87 490 2 405 0.0 569
MS.gene045063.t1 AT4G36250 47.609 460 238 1 16 472 6 465 1.19e-162 469
MS.gene045063.t1 AT4G34240 66.667 321 107 0 13 333 70 390 9.98e-151 436
MS.gene045063.t1 AT3G66658 27.146 431 296 6 36 452 106 532 8.62e-44 162
MS.gene045063.t1 AT3G66658 27.361 413 282 6 36 434 106 514 2.56e-43 162
MS.gene045063.t1 AT1G74920 27.571 457 304 12 15 449 37 488 4.25e-42 157
MS.gene045063.t1 AT1G74920 28.810 420 284 10 40 449 69 483 9.23e-42 156
MS.gene045063.t1 AT3G48170 27.338 417 289 9 40 447 74 485 1.25e-36 142
MS.gene045063.t1 AT1G79440 28.824 340 233 8 114 447 184 520 1.35e-33 133
MS.gene045063.t1 AT1G23800 27.455 448 301 13 14 448 89 525 1.55e-33 133
MS.gene045063.t1 AT3G48000 26.549 452 300 14 14 448 93 529 1.20e-28 119
MS.gene045063.t1 AT3G24503 27.729 339 235 7 117 448 157 492 2.61e-27 115
MS.gene045063.t1 AT2G24270 28.144 334 231 7 118 448 158 485 9.10e-25 107
MS.gene045063.t1 AT2G24270 28.144 334 231 7 118 448 158 485 9.10e-25 107
MS.gene045063.t1 AT2G24270 28.144 334 231 7 118 448 158 485 9.27e-25 107
MS.gene045063.t1 AT2G24270 28.707 317 217 7 118 431 198 508 1.14e-24 107
MS.gene045063.t1 AT2G14170 27.378 347 228 12 117 447 139 477 5.17e-18 87.0
MS.gene045063.t1 AT2G14170 27.378 347 228 12 117 447 248 586 5.48e-18 87.4
MS.gene045063.t1 AT1G23800 30.078 256 155 9 14 253 89 336 3.88e-17 84.0
MS.gene045063.t1 AT2G14170 27.273 308 203 10 115 408 246 546 1.09e-16 83.2
MS.gene045063.t1 AT1G54100 21.453 289 210 8 118 393 154 438 1.57e-13 73.2
MS.gene045063.t1 AT1G54100 21.453 289 210 8 118 393 154 438 1.57e-13 73.2

Find 119 sgRNAs with CRISPR-Local

Find 270 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTTCCAATTCTGTCTTTA+AGG 0.114075 3.2:+75101587 None:intergenic
GGGAAAATTTCATACCAATT+TGG 0.160031 3.2:+75101681 None:intergenic
GTTTCTGGCAAGGTTGTTTA+TGG 0.170486 3.2:-75101468 MS.gene045063:CDS
TCACTGCTGGCGAACTTATT+AGG 0.192129 3.2:-75102505 MS.gene045063:CDS
GGAAAATTTCATACCAATTT+GGG 0.208738 3.2:+75101682 None:intergenic
ACAGAATTGGAAAGCTTCTT+TGG 0.227872 3.2:-75101579 MS.gene045063:CDS
TTGGACGACGAGAAGGTTTC+TGG 0.237632 3.2:-75101483 MS.gene045063:CDS
TGGTTCATACTTTGCCATTT+GGG 0.248058 3.2:-75100875 MS.gene045063:CDS
GTGGTTCATACTTTGCCATT+TGG 0.266390 3.2:-75100876 MS.gene045063:CDS
TTTGTTGTTATAACGTAATC+AGG 0.304335 3.2:+75101715 None:intergenic
CACTGCTGGCGAACTTATTA+GGG 0.310991 3.2:-75102504 MS.gene045063:CDS
GATAAATCATTGGATTCTAT+TGG 0.315485 3.2:+75101549 None:intergenic
ACAGCTAGACGGATAATTTC+AGG 0.342418 3.2:-75101775 MS.gene045063:CDS
ACACCTTACACCAGTCGTTC+TGG 0.352826 3.2:-75102158 MS.gene045063:CDS
CTAGTCGCCGGCGATGTTAC+TGG 0.358446 3.2:-75100699 MS.gene045063:CDS
GGATTCAAATGTCAATTTAG+AGG 0.363970 3.2:-75102107 MS.gene045063:intron
CTGAGGGTGAGCTTTAATTC+TGG 0.376691 3.2:-75104668 MS.gene045063:CDS
TTCTAACCACTTTGCTCGCT+TGG 0.378374 3.2:-75101514 MS.gene045063:CDS
TGATGCCTTAAAGACAGAAT+TGG 0.379258 3.2:-75101592 MS.gene045063:CDS
AACACTACACCAAGTGGTTC+AGG 0.380052 3.2:+75103011 None:intergenic
TCCAGCCTCGTCTTCACTGC+TGG 0.400434 3.2:-75102518 MS.gene045063:CDS
TTCTGCTTTGTATCAGTGTA+AGG 0.401680 3.2:+75100735 None:intergenic
GGAGTTGGTGACAGTGGAAT+GGG 0.406759 3.2:-75100852 MS.gene045063:CDS
GAAGATGGTTGATGAACAAC+AGG 0.411988 3.2:-75104597 MS.gene045063:CDS
GGGAGTTGGTGACAGTGGAA+TGG 0.415308 3.2:-75100853 MS.gene045063:CDS
CTGTCCCTTGATCCAGTTGT+TGG 0.425314 3.2:-75102589 MS.gene045063:CDS
CACAATGCGCGATAAATCAT+TGG 0.432655 3.2:+75101539 None:intergenic
TACAAATGACAACAAGTTCA+AGG 0.442505 3.2:-75101056 MS.gene045063:CDS
GCTGCTATAGCTCCAACAAC+TGG 0.444023 3.2:+75102577 None:intergenic
ACACCAGTCGTTCTGGAGCT+TGG 0.446970 3.2:-75102151 MS.gene045063:CDS
ATAATGAGTGAGGAGATCTT+TGG 0.458834 3.2:-75101297 MS.gene045063:CDS
TGCTCGCTTGGTAAAGATGT+TGG 0.468945 3.2:-75101502 MS.gene045063:CDS
TAGCAATAGTATAAAATGTC+GGG 0.472828 3.2:-75104755 None:intergenic
TTTGTGAAGAATGTTTCTGC+TGG 0.473206 3.2:-75101028 MS.gene045063:CDS
GGTACTATTTCAGCTGAAGA+AGG 0.475298 3.2:+75103032 None:intergenic
ACAATGGATGGCCCCAGAAA+AGG 0.476780 3.2:-75103190 MS.gene045063:intron
ACATTTGAATCCACAACAGT+TGG 0.479478 3.2:+75102118 None:intergenic
GGTTGTTTATGGAGGTGAAA+AGG 0.487907 3.2:-75101457 MS.gene045063:CDS
CTGCATTGTTGCAACAAAAG+TGG 0.494247 3.2:-75102426 MS.gene045063:CDS
CTTGGAACAGGTGAACAAGC+TGG 0.495328 3.2:-75101134 MS.gene045063:intron
CGGAGAAGCGGCGTCGTCGT+TGG 0.495817 3.2:-75104699 MS.gene045063:CDS
TAGCTCCAACAACTGGATCA+AGG 0.496212 3.2:+75102584 None:intergenic
TGGAGCGTCTAATACAATAG+TGG 0.501825 3.2:+75101332 None:intergenic
GGTTCATACTTTGCCATTTG+GGG 0.508394 3.2:-75100874 MS.gene045063:CDS
GACGGATAATTTCAGGAAAG+TGG 0.508972 3.2:-75101768 MS.gene045063:CDS
CAGAATTAAAGCTCACCCTC+AGG 0.511369 3.2:+75104669 None:intergenic
TTACGGGTGATGCATCGATA+AGG 0.514070 3.2:-75100764 MS.gene045063:CDS
GCTCCAGAACGACTGGTGTA+AGG 0.516414 3.2:+75102155 None:intergenic
TGAAGATCAGTCACAGAAGA+AGG 0.516470 3.2:-75104732 MS.gene045063:CDS
GTAAATAAATATGCAGCAAG+TGG 0.517979 3.2:+75101076 None:intergenic
GCCAGCAGTGAAGACGAGGC+TGG 0.518366 3.2:+75102517 None:intergenic
AACGTAATCAGGAGAAATGC+AGG 0.519634 3.2:+75101726 None:intergenic
AGGAAAATCTCCAACTGTTG+TGG 0.520349 3.2:-75102128 MS.gene045063:CDS
ATCTATAAGAGTTGTGGAGG+GGG 0.520366 3.2:-75102464 MS.gene045063:CDS
CAGAAGAAGGTGGTGTTTGA+CGG 0.522711 3.2:-75104719 MS.gene045063:CDS
AGCGGCGTCGTCGTTGGTGA+AGG 0.523107 3.2:-75104693 MS.gene045063:CDS
CCTCCAAGCTCCAGAACGAC+TGG 0.525093 3.2:+75102148 None:intergenic
TTTGTGAGTAAAAGCGTCAA+AGG 0.526185 3.2:+75100809 None:intergenic
GGAAAGTGGTGCTGTAACAA+TGG 0.528505 3.2:-75101754 MS.gene045063:CDS
CTCATCTATAAGAGTTGTGG+AGG 0.535901 3.2:-75102467 MS.gene045063:CDS
CCAGTCGTTCTGGAGCTTGG+AGG 0.536552 3.2:-75102148 MS.gene045063:CDS
GTTGTTGGAGCTATAGCAGC+CGG 0.541671 3.2:-75102574 MS.gene045063:CDS
TGCTTTGTATCAGTGTAAGG+CGG 0.541950 3.2:+75100738 None:intergenic
GTAAGACACGAAGTTATGAA+TGG 0.543765 3.2:-75104646 MS.gene045063:CDS
AGCTCCAACAACTGGATCAA+GGG 0.544547 3.2:+75102585 None:intergenic
TCTGGCAAGGTTGTTTATGG+AGG 0.544720 3.2:-75101465 MS.gene045063:CDS
TTATGAATGGAGAGTATCGC+AGG 0.547189 3.2:-75104633 MS.gene045063:CDS
TACAAAGCAGAAATTGATGA+AGG 0.548509 3.2:-75100724 MS.gene045063:CDS
TTTATTCTTACCGTGATGAT+GGG 0.548703 3.2:+75101264 None:intergenic
GTGAAGAATGTTTCTGCTGG+GGG 0.549524 3.2:-75101025 MS.gene045063:CDS
TGCATTGTTGCAACAAAAGT+GGG 0.550398 3.2:-75102425 MS.gene045063:CDS
TAGTGTTAGTCATCTCTGCT+TGG 0.552108 3.2:-75102995 MS.gene045063:CDS
TAACTCATCTATAAGAGTTG+TGG 0.553446 3.2:-75102470 MS.gene045063:CDS
CGACGAGAAGGTTTCTGGCA+AGG 0.555363 3.2:-75101478 MS.gene045063:CDS
TTTCAAGCGGTGGTTTAGCA+AGG 0.558890 3.2:+75104546 None:intergenic
CTCATTATCAGAGAATCTTG+TGG 0.559354 3.2:+75101312 None:intergenic
TTGTGAAGAATGTTTCTGCT+GGG 0.560631 3.2:-75101027 MS.gene045063:CDS
TTGATGAAGGCTCTAGTCGC+CGG 0.564772 3.2:-75100711 MS.gene045063:CDS
GAGGCTGGAGCAATTTCTGA+TGG 0.566074 3.2:+75102532 None:intergenic
CGTCGTTGGTGAAGGACCTG+AGG 0.569144 3.2:-75104685 MS.gene045063:CDS
GAAAATTTCATACCAATTTG+GGG 0.571184 3.2:+75101683 None:intergenic
CGCTGAAGGAATTGAAACAA+TGG 0.574396 3.2:-75103206 MS.gene045063:CDS
GGAGCGTCTAATACAATAGT+GGG 0.580198 3.2:+75101333 None:intergenic
GTGGAATGGGTGCATACCAT+GGG 0.581183 3.2:-75100839 MS.gene045063:CDS
GCTTTGTATCAGTGTAAGGC+GGG 0.584751 3.2:+75100739 None:intergenic
GTTCATACTTTGCCATTTGG+GGG 0.589580 3.2:-75100873 MS.gene045063:CDS
AAAGATGTTGGACGACGAGA+AGG 0.593143 3.2:-75101490 MS.gene045063:CDS
GAAGGAATTGAAACAATGGA+TGG 0.595708 3.2:-75103202 MS.gene045063:CDS
ACCGTGATGATGGGAAGCAA+TGG 0.595840 3.2:+75101273 None:intergenic
CAGGTAATGGAAAAGTGGGA+CGG 0.603039 3.2:-75102204 MS.gene045063:CDS
CTCATGTGAAGTCACGCTGA+AGG 0.604871 3.2:-75103220 MS.gene045063:CDS
TCATCTATAAGAGTTGTGGA+GGG 0.608439 3.2:-75102466 MS.gene045063:CDS
TTTACTAGGTTACAGCTAGA+CGG 0.610366 3.2:-75101786 MS.gene045063:intron
AGCTTCGATTTGATCAACGC+AGG 0.611901 3.2:-75101106 MS.gene045063:CDS
GGTGGTGTTTGACGGAGAAG+CGG 0.613325 3.2:-75104711 MS.gene045063:CDS
TAGACAACAGTTTCAAGCGG+TGG 0.617970 3.2:+75104536 None:intergenic
GTCGTTGGTGAAGGACCTGA+GGG 0.624859 3.2:-75104684 MS.gene045063:CDS
TCCATTGCTTCCCATCATCA+CGG 0.625141 3.2:-75101274 MS.gene045063:intron
GAACTTATTAGGGAGGTACA+TGG 0.626641 3.2:-75102494 MS.gene045063:CDS
AAAATTTCATACCAATTTGG+GGG 0.628857 3.2:+75101684 None:intergenic
GTTCGCCAGCAGTGAAGACG+AGG 0.630975 3.2:+75102513 None:intergenic
AACAACACCAGTAACATCGC+CGG 0.631565 3.2:+75100692 None:intergenic
CATCTATAAGAGTTGTGGAG+GGG 0.632599 3.2:-75102465 MS.gene045063:CDS
GAAATAGTACCTGAACCACT+TGG 0.636077 3.2:-75103020 MS.gene045063:CDS
AGATTCTCTGATAATGAGTG+AGG 0.639886 3.2:-75101307 MS.gene045063:CDS
ATGACTAACACTACACCAAG+TGG 0.646296 3.2:+75103005 None:intergenic
CAATGCAGTAGTTTCATCAA+CGG 0.649582 3.2:+75102441 None:intergenic
TGTGAAGAATGTTTCTGCTG+GGG 0.658052 3.2:-75101026 MS.gene045063:CDS
TGCTGGCGAACTTATTAGGG+AGG 0.664145 3.2:-75102501 MS.gene045063:CDS
AAAAGTGGGACGGATAGTGA+TGG 0.666797 3.2:-75102194 MS.gene045063:CDS
AGTGGGACGGATAGTGATGG+CGG 0.669702 3.2:-75102191 MS.gene045063:CDS
AGTGGAATGGGTGCATACCA+TGG 0.672625 3.2:-75100840 MS.gene045063:CDS
TCTTTACCAAGCGAGCAAAG+TGG 0.678259 3.2:+75101508 None:intergenic
GCTTGAAACTGTTGTCTACG+AGG 0.679853 3.2:-75104531 MS.gene045063:intron
TATAGCAGCCGGAAACGCCG+TGG 0.683688 3.2:-75102563 MS.gene045063:CDS
TCGTAGACAACAGTTTCAAG+CGG 0.691579 3.2:+75104533 None:intergenic
CGTCAAAGGAGAATTTCCCA+TGG 0.693948 3.2:+75100823 None:intergenic
ATGCATCACCCGTAAAACCA+CGG 0.701105 3.2:+75100772 None:intergenic
AGATCAGTCACAGAAGAAGG+TGG 0.702169 3.2:-75104729 MS.gene045063:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTCAACTTAAAATATTTTT+GGG - chr3.2:75101932-75101951 MS.gene045063:intron 10.0%
!!! TTTTATGTTTTCTTTAATAA+AGG - chr3.2:75101164-75101183 MS.gene045063:intron 10.0%
!! TAGATTATTAAAGAAACTAA+AGG + chr3.2:75102758-75102777 None:intergenic 15.0%
!!! GATTCAACTTAAAATATTTT+TGG - chr3.2:75101931-75101950 MS.gene045063:intron 15.0%
!!! TAAAGTTAAATTGTTTTCAA+TGG + chr3.2:75103400-75103419 None:intergenic 15.0%
!!! TAAATTAATTTGTGTTTACT+AGG - chr3.2:75103608-75103627 MS.gene045063:intron 15.0%
!! AAAAATAAACTTTGATTGAC+TGG - chr3.2:75101604-75101623 MS.gene045063:intron 20.0%
!! AAAATTCACAATACCAATAA+TGG + chr3.2:75103106-75103125 None:intergenic 20.0%
!! AAGATATCGTGAAAAATTTA+TGG + chr3.2:75102586-75102605 None:intergenic 20.0%
!! AGTTCCTTTAATAATATTTC+AGG - chr3.2:75102330-75102349 MS.gene045063:intron 20.0%
!! TACAAATGTTACAAAATGTT+CGG + chr3.2:75102030-75102049 None:intergenic 20.0%
!! TTAAGTCAATAATGAGTTAA+GGG + chr3.2:75103591-75103610 None:intergenic 20.0%
!! TTAGCCTGAAATATTATTAA+AGG + chr3.2:75102337-75102356 None:intergenic 20.0%
!! TTTAAAAATTTAGTATCCCT+TGG - chr3.2:75101955-75101974 MS.gene045063:intron 20.0%
!! TTTAAGTCAATAATGAGTTA+AGG + chr3.2:75103592-75103611 None:intergenic 20.0%
!!! AAAAGCATTTTTCTTTTTGA+AGG + chr3.2:75101214-75101233 None:intergenic 20.0%
!!! AAAAGGTGTATGTAAAATAA+GGG - chr3.2:75101570-75101589 MS.gene045063:CDS 20.0%
!!! AAAGCATTTTTCTTTTTGAA+GGG + chr3.2:75101213-75101232 None:intergenic 20.0%
!!! ATAAACATCATAAGTTTTCA+AGG - chr3.2:75101040-75101059 MS.gene045063:CDS 20.0%
!!! ATGGTTATGAATTGTTATTT+TGG - chr3.2:75103059-75103078 MS.gene045063:CDS 20.0%
!!! ATTAAATTTTTCATCCAATC+AGG - chr3.2:75103499-75103518 MS.gene045063:intron 20.0%
!!! GAAATCTAAATCAATTTGTT+AGG - chr3.2:75101431-75101450 MS.gene045063:intron 20.0%
!!! GTAACTAAACAAACATATTT+TGG - chr3.2:75102047-75102066 MS.gene045063:intron 20.0%
!!! GTTACTCTATTTTGAATTTA+TGG + chr3.2:75102008-75102027 None:intergenic 20.0%
!!! TAAAAGGTGTATGTAAAATA+AGG - chr3.2:75101569-75101588 MS.gene045063:CDS 20.0%
!!! TAAGTAATTACTTGATTTTC+AGG - chr3.2:75103185-75103204 MS.gene045063:intron 20.0%
!!! TATGTTTTCTTTAATAAAGG+AGG - chr3.2:75101167-75101186 MS.gene045063:intron 20.0%
!!! TATTCTTGAGATTTTTCATT+TGG - chr3.2:75101069-75101088 MS.gene045063:CDS 20.0%
!!! TATTTTGAATTTATGGAAAG+CGG + chr3.2:75102001-75102020 None:intergenic 20.0%
!!! TGTATCCAATTTAAAACAAT+GGG - chr3.2:75104224-75104243 MS.gene045063:intron 20.0%
!!! TTCACCTTCTTTTTTTTTTA+CGG - chr3.2:75101232-75101251 MS.gene045063:intron 20.0%
!!! TTCTGGAAAATATAAGTAAA+AGG - chr3.2:75101553-75101572 MS.gene045063:CDS 20.0%
!!! TTGTATCCAATTTAAAACAA+TGG - chr3.2:75104223-75104242 MS.gene045063:intron 20.0%
!!! TTTACCTTTTGTTATACAAA+TGG - chr3.2:75102627-75102646 MS.gene045063:intron 20.0%
! AAAATTTCATACCAATTTGG+GGG + chr3.2:75103727-75103746 None:intergenic 25.0%
! AATCAAAGTAATTGTATCGT+CGG + chr3.2:75101120-75101139 None:intergenic 25.0%
! AGCAACTTAAACATGAAATT+AGG + chr3.2:75100905-75100924 None:intergenic 25.0%
! ATAAGTAACATTGCATGATA+AGG + chr3.2:75104486-75104505 None:intergenic 25.0%
! ATAATACTTTCTTTCTTGCT+TGG - chr3.2:75104256-75104275 MS.gene045063:intron 25.0%
! GAAAATTTCATACCAATTTG+GGG + chr3.2:75103728-75103747 None:intergenic 25.0%
! GATAAATCATTGGATTCTAT+TGG + chr3.2:75103862-75103881 None:intergenic 25.0%
! GGAAAATTTCATACCAATTT+GGG + chr3.2:75103729-75103748 None:intergenic 25.0%
! TAAAATATTGACGTCATACA+AGG + chr3.2:75101149-75101168 None:intergenic 25.0%
! TAAGCCATTTGTATAACAAA+AGG + chr3.2:75102634-75102653 None:intergenic 25.0%
! TAAGTCAATAATGAGTTAAG+GGG + chr3.2:75103590-75103609 None:intergenic 25.0%
! TATACTATTCTCAACTACAT+TGG - chr3.2:75101909-75101928 MS.gene045063:intron 25.0%
! TGACTGGAAAATAAAAAAGA+AGG + chr3.2:75103538-75103557 None:intergenic 25.0%
! TGTTCCGTAAAAAAAAAAGA+AGG + chr3.2:75101239-75101258 None:intergenic 25.0%
! TTAATAAGTCAATCCAAACA+TGG + chr3.2:75103339-75103358 None:intergenic 25.0%
!! ACAAAATTTTGTATACAGGT+TGG - chr3.2:75103006-75103025 MS.gene045063:CDS 25.0%
!! GTATCCAATTTAAAACAATG+GGG - chr3.2:75104225-75104244 MS.gene045063:intron 25.0%
!! TTTTATATACTGCAATGCAA+TGG - chr3.2:75104019-75104038 MS.gene045063:intron 25.0%
!!! ATTACTTGATTTTCAGGTAA+TGG - chr3.2:75103191-75103210 MS.gene045063:CDS 25.0%
!!! CAATTTAGAGGTATTGATTA+AGG - chr3.2:75103313-75103332 MS.gene045063:intron 25.0%
!!! CATAATAAATTGGTTTGGTT+TGG - chr3.2:75101394-75101413 MS.gene045063:intron 25.0%
!!! TGTTTTTTACAATGAGTAGT+TGG - chr3.2:75101640-75101659 MS.gene045063:intron 25.0%
!!! TTTGTTGTTATAACGTAATC+AGG + chr3.2:75103696-75103715 None:intergenic 25.0%
AATACAACTAAGCAATTGAC+AGG - chr3.2:75102073-75102092 MS.gene045063:intron 30.0%
AATCACGTAAATACAAGTCA+CGG - chr3.2:75101297-75101316 MS.gene045063:CDS 30.0%
AATCCTAATAGCCATAACTT+TGG - chr3.2:75101683-75101702 MS.gene045063:intron 30.0%
ACTTCCTAGGCATAATAAAT+TGG - chr3.2:75101384-75101403 MS.gene045063:intron 30.0%
ATTGAGTGAAATGAAACCAA+GGG + chr3.2:75101974-75101993 None:intergenic 30.0%
CAAACCAATTTATTATGCCT+AGG + chr3.2:75101391-75101410 None:intergenic 30.0%
CCATTTAGTAAAAAGGAAAG+AGG + chr3.2:75101861-75101880 None:intergenic 30.0%
CCTACTAAACTTGAATTAAG+AGG + chr3.2:75103999-75104018 None:intergenic 30.0%
CGCTATATATCGAAAACTAT+TGG + chr3.2:75101484-75101503 None:intergenic 30.0%
CTAGGCATAATAAATTGGTT+TGG - chr3.2:75101389-75101408 MS.gene045063:intron 30.0%
GATAAGGATATATGCATTCA+TGG + chr3.2:75104470-75104489 None:intergenic 30.0%
GGATTCAAATGTCAATTTAG+AGG - chr3.2:75103301-75103320 MS.gene045063:intron 30.0%
GGGAAAATTTCATACCAATT+TGG + chr3.2:75103730-75103749 None:intergenic 30.0%
GTAAATAAATATGCAGCAAG+TGG + chr3.2:75104335-75104354 None:intergenic 30.0%
GTCTTTGTGTATCTAATGTT+TGG - chr3.2:75103775-75103794 MS.gene045063:intron 30.0%
TAACTCAAATACAACCAACA+AGG + chr3.2:75102725-75102744 None:intergenic 30.0%
TAACTCATCTATAAGAGTTG+TGG - chr3.2:75102938-75102957 MS.gene045063:intron 30.0%
TACAAAGCAGAAATTGATGA+AGG - chr3.2:75104684-75104703 MS.gene045063:CDS 30.0%
TACAAATGACAACAAGTTCA+AGG - chr3.2:75104352-75104371 MS.gene045063:intron 30.0%
TATTGTGTCAACCAAAGTTA+TGG + chr3.2:75101697-75101716 None:intergenic 30.0%
TCATATTGCTTTCATGTGTA+AGG + chr3.2:75103446-75103465 None:intergenic 30.0%
TGATATAACTAGTTACTGAC+TGG + chr3.2:75103554-75103573 None:intergenic 30.0%
TTAGTAAAAAGGAAAGAGGT+TGG + chr3.2:75101857-75101876 None:intergenic 30.0%
TTTATTCTTACCGTGATGAT+GGG + chr3.2:75104147-75104166 None:intergenic 30.0%
! ATTTAGAACTCTTAACAACG+AGG + chr3.2:75103751-75103770 None:intergenic 30.0%
! ATTTGGAGTCACTATTATGA+TGG - chr3.2:75101086-75101105 MS.gene045063:CDS 30.0%
! CCTCTTAATTCAAGTTTAGT+AGG - chr3.2:75103996-75104015 MS.gene045063:intron 30.0%
! CCTCTTTCCTTTTTACTAAA+TGG - chr3.2:75101858-75101877 MS.gene045063:intron 30.0%
! GGGTAAAATAAACCTTTTCT+GGG + chr3.2:75102233-75102252 None:intergenic 30.0%
! GGTAAAATAAACCTTTTCTG+GGG + chr3.2:75102232-75102251 None:intergenic 30.0%
! TGGGACAAAATTTTGTATAC+AGG - chr3.2:75103002-75103021 MS.gene045063:CDS 30.0%
! TTTAGAACTCTTAACAACGA+GGG + chr3.2:75103750-75103769 None:intergenic 30.0%
! TTTTATTCTTACCGTGATGA+TGG + chr3.2:75104148-75104167 None:intergenic 30.0%
!!! ATGTACTTTGTTTTGCAGAT+TGG - chr3.2:75102153-75102172 MS.gene045063:CDS 30.0%
!!! ATTTTCAGGTAATGGAAAAG+TGG - chr3.2:75103199-75103218 MS.gene045063:CDS 30.0%
!!! TTTTCAGGTAATGGAAAAGT+GGG - chr3.2:75103200-75103219 MS.gene045063:CDS 30.0%
AAGTAATTGTATCGTCGGAA+CGG + chr3.2:75101115-75101134 None:intergenic 35.0%
ACAGAATTGGAAAGCTTCTT+TGG - chr3.2:75103829-75103848 MS.gene045063:intron 35.0%
ACATTTGAATCCACAACAGT+TGG + chr3.2:75103293-75103312 None:intergenic 35.0%
ACGGAGTCCATTTAGTAAAA+AGG + chr3.2:75101868-75101887 None:intergenic 35.0%
AGGATGCTTCTTAAAAGACA+GGG - chr3.2:75101325-75101344 MS.gene045063:CDS 35.0%
ATAATGAGTGAGGAGATCTT+TGG - chr3.2:75104111-75104130 MS.gene045063:intron 35.0%
ATGGAGGAATAAAACTTCCT+AGG - chr3.2:75101371-75101390 MS.gene045063:intron 35.0%
CAACCAAAGTTATGGCTATT+AGG + chr3.2:75101689-75101708 None:intergenic 35.0%
CAATGCAGTAGTTTCATCAA+CGG + chr3.2:75102970-75102989 None:intergenic 35.0%
CATTGAGTGAAATGAAACCA+AGG + chr3.2:75101975-75101994 None:intergenic 35.0%
CTAAACAGTCTCAAGAATGT+TGG + chr3.2:75102506-75102525 None:intergenic 35.0%
CTCATTATCAGAGAATCTTG+TGG + chr3.2:75104099-75104118 None:intergenic 35.0%
CTGAAGGTCAACTTACAAAA+TGG + chr3.2:75102445-75102464 None:intergenic 35.0%
GAAGGAATTGAAACAATGGA+TGG - chr3.2:75102206-75102225 MS.gene045063:intron 35.0%
GCTTTCCAATTCTGTCTTTA+AGG + chr3.2:75103824-75103843 None:intergenic 35.0%
GGATATATGCATTCATGGAA+AGG + chr3.2:75104465-75104484 None:intergenic 35.0%
GTAAGACACGAAGTTATGAA+TGG - chr3.2:75100762-75100781 MS.gene045063:CDS 35.0%
TCAATAATGAGTTAAGGGGA+AGG + chr3.2:75103586-75103605 None:intergenic 35.0%
TCATCTATAAGAGTTGTGGA+GGG - chr3.2:75102942-75102961 MS.gene045063:intron 35.0%
TCTTGACACAAGCAAATTAC+AGG - chr3.2:75104043-75104062 MS.gene045063:intron 35.0%
TGATGCCTTAAAGACAGAAT+TGG - chr3.2:75103816-75103835 MS.gene045063:intron 35.0%
TGCAATTGGTATGCCATTAT+TGG - chr3.2:75103090-75103109 MS.gene045063:intron 35.0%
TGCATTGTTGCAACAAAAGT+GGG - chr3.2:75102983-75103002 MS.gene045063:CDS 35.0%
TTAACAGAACAGAACCTTGT+TGG - chr3.2:75102708-75102727 MS.gene045063:intron 35.0%
TTCTGCTTTGTATCAGTGTA+AGG + chr3.2:75104676-75104695 None:intergenic 35.0%
TTTACTAGGTTACAGCTAGA+CGG - chr3.2:75103622-75103641 MS.gene045063:intron 35.0%
! AGATTCTCTGATAATGAGTG+AGG - chr3.2:75104101-75104120 MS.gene045063:intron 35.0%
! ATTGTTTTCAATGGCTATCC+AGG + chr3.2:75103391-75103410 None:intergenic 35.0%
! GGGGTAAAATAAACCTTTTC+TGG + chr3.2:75102234-75102253 None:intergenic 35.0%
! TAATTTTAAGCACGGTCAAG+AGG + chr3.2:75101824-75101843 None:intergenic 35.0%
! TGACGCTTTTACTCACAAAA+AGG - chr3.2:75104603-75104622 MS.gene045063:CDS 35.0%
! TGGTTCATACTTTGCCATTT+GGG - chr3.2:75104533-75104552 MS.gene045063:CDS 35.0%
! TTGTGAAGAATGTTTCTGCT+GGG - chr3.2:75104381-75104400 MS.gene045063:intron 35.0%
! TTGTGAGAACTAAAGTGTTC+TGG - chr3.2:75101536-75101555 MS.gene045063:CDS 35.0%
! TTTGTGAAGAATGTTTCTGC+TGG - chr3.2:75104380-75104399 MS.gene045063:intron 35.0%
!! AGTTCTTTACCGTGGTTTTA+CGG - chr3.2:75104627-75104646 MS.gene045063:CDS 35.0%
!! GAAGGCGCTAATTTATTCAA+TGG - chr3.2:75101352-75101371 MS.gene045063:intron 35.0%
!! GTATTGATTAAGGCCATGTT+TGG - chr3.2:75103323-75103342 MS.gene045063:intron 35.0%
!! TATCACCAGTCTGTTTTTCT+TGG - chr3.2:75103036-75103055 MS.gene045063:CDS 35.0%
!! TTTGTGAGTAAAAGCGTCAA+AGG + chr3.2:75104602-75104621 None:intergenic 35.0%
!!! GATGCCCCATTGTTTTAAAT+TGG + chr3.2:75104232-75104251 None:intergenic 35.0%
!!! TTCTGATGGTTTTAGAACCA+CGG + chr3.2:75102865-75102884 None:intergenic 35.0%
!!! TTTTGGTTTTGTCGTGCAAT+TGG - chr3.2:75103076-75103095 MS.gene045063:intron 35.0%
AAAAAGGCAGTTCTTTACCG+TGG - chr3.2:75104619-75104638 MS.gene045063:CDS 40.0%
AAAAGACTTTGCCCCCAAAT+TGG - chr3.2:75103713-75103732 MS.gene045063:intron 40.0%
AAAAGGAAAGAGGTTGGACT+AGG + chr3.2:75101851-75101870 None:intergenic 40.0%
AAATACAAGTCACGGAAACC+AGG - chr3.2:75101305-75101324 MS.gene045063:CDS 40.0%
AACGTAATCAGGAGAAATGC+AGG + chr3.2:75103685-75103704 None:intergenic 40.0%
AAGTTGACCTTCAGCATGAT+TGG - chr3.2:75102451-75102470 MS.gene045063:CDS 40.0%
ACAGCTAGACGGATAATTTC+AGG - chr3.2:75103633-75103652 MS.gene045063:intron 40.0%
ACCATCCAAGAAAAACAGAC+TGG + chr3.2:75103044-75103063 None:intergenic 40.0%
AGGAAAATCTCCAACTGTTG+TGG - chr3.2:75103280-75103299 MS.gene045063:intron 40.0%
AGTCAAACCAATCATGCTGA+AGG + chr3.2:75102461-75102480 None:intergenic 40.0%
ATCTATAAGAGTTGTGGAGG+GGG - chr3.2:75102944-75102963 MS.gene045063:intron 40.0%
ATGACTAACACTACACCAAG+TGG + chr3.2:75102406-75102425 None:intergenic 40.0%
CACAATGCGCGATAAATCAT+TGG + chr3.2:75103872-75103891 None:intergenic 40.0%
CAGGATGCTTCTTAAAAGAC+AGG - chr3.2:75101324-75101343 MS.gene045063:CDS 40.0%
CATCTATAAGAGTTGTGGAG+GGG - chr3.2:75102943-75102962 MS.gene045063:intron 40.0%
CCTTCTCAGCTGAAGAAATT+GGG + chr3.2:75102254-75102273 None:intergenic 40.0%
CGCTGAAGGAATTGAAACAA+TGG - chr3.2:75102202-75102221 MS.gene045063:CDS 40.0%
CGTAGCAGTTGAGAAAAACT+CGG - chr3.2:75101885-75101904 MS.gene045063:intron 40.0%
CTCATCTATAAGAGTTGTGG+AGG - chr3.2:75102941-75102960 MS.gene045063:intron 40.0%
CTGCATTGTTGCAACAAAAG+TGG - chr3.2:75102982-75103001 MS.gene045063:CDS 40.0%
CTTAAAAGACAGGGACAAGA+AGG - chr3.2:75101334-75101353 MS.gene045063:CDS 40.0%
CTTCTCAGCTGAAGAAATTG+GGG + chr3.2:75102253-75102272 None:intergenic 40.0%
CTTTCTTTCTTGCTTGGAAC+AGG - chr3.2:75104262-75104281 MS.gene045063:intron 40.0%
GAAATAGTACCTGAACCACT+TGG - chr3.2:75102388-75102407 MS.gene045063:intron 40.0%
GACGGATAATTTCAGGAAAG+TGG - chr3.2:75103640-75103659 MS.gene045063:intron 40.0%
GCTAAGACTTAGAACCTGAT+TGG + chr3.2:75103516-75103535 None:intergenic 40.0%
GGCGCTAATTTATTCAATGG+AGG - chr3.2:75101355-75101374 MS.gene045063:intron 40.0%
GGTACTATTTCAGCTGAAGA+AGG + chr3.2:75102379-75102398 None:intergenic 40.0%
GGTTGTTTATGGAGGTGAAA+AGG - chr3.2:75103951-75103970 MS.gene045063:intron 40.0%
GTAACTTGAAAATGCTACGC+AGG + chr3.2:75101769-75101788 None:intergenic 40.0%
GTACATCAGTGAAGAGTAGA+AGG + chr3.2:75102139-75102158 None:intergenic 40.0%
GTGGTTCATACTTTGCCATT+TGG - chr3.2:75104532-75104551 MS.gene045063:CDS 40.0%
TAGTGTTAGTCATCTCTGCT+TGG - chr3.2:75102413-75102432 MS.gene045063:CDS 40.0%
TCCTTCTCAGCTGAAGAAAT+TGG + chr3.2:75102255-75102274 None:intergenic 40.0%
TCGTAGACAACAGTTTCAAG+CGG + chr3.2:75100878-75100897 None:intergenic 40.0%
TGAAGATCAGTCACAGAAGA+AGG - chr3.2:75100676-75100695 MS.gene045063:CDS 40.0%
TGACACAAGCAAATTACAGG+AGG - chr3.2:75104046-75104065 MS.gene045063:intron 40.0%
TGCTTTGTATCAGTGTAAGG+CGG + chr3.2:75104673-75104692 None:intergenic 40.0%
! CGAGTTTTTCTCAACTGCTA+CGG + chr3.2:75101887-75101906 None:intergenic 40.0%
! GAACTTATTAGGGAGGTACA+TGG - chr3.2:75102914-75102933 MS.gene045063:intron 40.0%
! GGAGCGTCTAATACAATAGT+GGG + chr3.2:75104078-75104097 None:intergenic 40.0%
! GGTTCATACTTTGCCATTTG+GGG - chr3.2:75104534-75104553 MS.gene045063:CDS 40.0%
! GTTATTTCCTTCAGTTCTCC+TGG - chr3.2:75103370-75103389 MS.gene045063:intron 40.0%
! GTTCATACTTTGCCATTTGG+GGG - chr3.2:75104535-75104554 MS.gene045063:CDS 40.0%
! TAGGCGGCTAATTTTAAGCA+CGG + chr3.2:75101832-75101851 None:intergenic 40.0%
! TGGAGCGTCTAATACAATAG+TGG + chr3.2:75104079-75104098 None:intergenic 40.0%
! TGTGAAGAATGTTTCTGCTG+GGG - chr3.2:75104382-75104401 MS.gene045063:intron 40.0%
! TTGTTCGTGCTCTTTTTGGA+TGG - chr3.2:75104734-75104753 MS.gene045063:CDS 40.0%
!! ACCAGTCTGTTTTTCTTGGA+TGG - chr3.2:75103040-75103059 MS.gene045063:CDS 40.0%
!! GAAGATGGTTGATGAACAAC+AGG - chr3.2:75100811-75100830 MS.gene045063:CDS 40.0%
!! GGTGAAAGCTCTTTTGAAGA+TGG - chr3.2:75100796-75100815 MS.gene045063:CDS 40.0%
!! GTTCTTTACCGTGGTTTTAC+GGG - chr3.2:75104628-75104647 MS.gene045063:CDS 40.0%
!! GTTTCTGGCAAGGTTGTTTA+TGG - chr3.2:75103940-75103959 MS.gene045063:intron 40.0%
!! TTATGAATGGAGAGTATCGC+AGG - chr3.2:75100775-75100794 MS.gene045063:CDS 40.0%
!!! CTGTCTTTTAAGAAGCATCC+TGG + chr3.2:75101326-75101345 None:intergenic 40.0%
AAAAGTGGGACGGATAGTGA+TGG - chr3.2:75103214-75103233 MS.gene045063:CDS 45.0%
AAAGATGTTGGACGACGAGA+AGG - chr3.2:75103918-75103937 MS.gene045063:intron 45.0%
AACAACACCAGTAACATCGC+CGG + chr3.2:75104719-75104738 None:intergenic 45.0%
AACACTACACCAAGTGGTTC+AGG + chr3.2:75102400-75102419 None:intergenic 45.0%
AGATCAGTCACAGAAGAAGG+TGG - chr3.2:75100679-75100698 MS.gene045063:CDS 45.0%
AGCTCCAACAACTGGATCAA+GGG + chr3.2:75102826-75102845 None:intergenic 45.0%
AGTTACTCGCGAAATTCGCA+TGG - chr3.2:75101783-75101802 MS.gene045063:intron 45.0%
ATGCATCACCCGTAAAACCA+CGG + chr3.2:75104639-75104658 None:intergenic 45.0%
CACTGCTGGCGAACTTATTA+GGG - chr3.2:75102904-75102923 MS.gene045063:intron 45.0%
CAGAAGAAGGTGGTGTTTGA+CGG - chr3.2:75100689-75100708 MS.gene045063:CDS 45.0%
CAGAATTAAAGCTCACCCTC+AGG + chr3.2:75100742-75100761 None:intergenic 45.0%
CCCAATTTCTTCAGCTGAGA+AGG - chr3.2:75102251-75102270 MS.gene045063:intron 45.0%
CGTCAAAGGAGAATTTCCCA+TGG + chr3.2:75104588-75104607 None:intergenic 45.0%
GCTTGAAACTGTTGTCTACG+AGG - chr3.2:75100877-75100896 MS.gene045063:CDS 45.0%
GCTTTGTATCAGTGTAAGGC+GGG + chr3.2:75104672-75104691 None:intergenic 45.0%
TAGACAACAGTTTCAAGCGG+TGG + chr3.2:75100875-75100894 None:intergenic 45.0%
TAGCTCCAACAACTGGATCA+AGG + chr3.2:75102827-75102846 None:intergenic 45.0%
TATGAACCACAAGCTGCACA+AGG + chr3.2:75104522-75104541 None:intergenic 45.0%
TCACTGCTGGCGAACTTATT+AGG - chr3.2:75102903-75102922 MS.gene045063:intron 45.0%
TCCATTGCTTCCCATCATCA+CGG - chr3.2:75104134-75104153 MS.gene045063:intron 45.0%
TCTGGCAAGGTTGTTTATGG+AGG - chr3.2:75103943-75103962 MS.gene045063:intron 45.0%
TCTTTACCAAGCGAGCAAAG+TGG + chr3.2:75103903-75103922 None:intergenic 45.0%
TGAAAATGCTACGCAGGCAT+TGG + chr3.2:75101763-75101782 None:intergenic 45.0%
TGCGTATTAGTGTGAGACTG+TGG - chr3.2:75101733-75101752 MS.gene045063:CDS 45.0%
TGCTCGCTTGGTAAAGATGT+TGG - chr3.2:75103906-75103925 MS.gene045063:intron 45.0%
TTCTAACCACTTTGCTCGCT+TGG - chr3.2:75103894-75103913 MS.gene045063:intron 45.0%
TTTCAAGCGGTGGTTTAGCA+AGG + chr3.2:75100865-75100884 None:intergenic 45.0%
! AGCTTCGATTTGATCAACGC+AGG - chr3.2:75104302-75104321 MS.gene045063:intron 45.0%
! CTGAGGGTGAGCTTTAATTC+TGG - chr3.2:75100740-75100759 MS.gene045063:CDS 45.0%
! GTGAAGAATGTTTCTGCTGG+GGG - chr3.2:75104383-75104402 MS.gene045063:intron 45.0%
! TTACGGGTGATGCATCGATA+AGG - chr3.2:75104644-75104663 MS.gene045063:CDS 45.0%
!! CAGGTAATGGAAAAGTGGGA+CGG - chr3.2:75103204-75103223 MS.gene045063:CDS 45.0%
!! CTGTCTTTAAGGCATCAACC+TGG + chr3.2:75103813-75103832 None:intergenic 45.0%
!! GGAAAGTGGTGCTGTAACAA+TGG - chr3.2:75103654-75103673 MS.gene045063:intron 45.0%
!!! GGTGTTGTTCGTGCTCTTTT+TGG - chr3.2:75104730-75104749 MS.gene045063:CDS 45.0%
!!! TTTTAGAACCACGGCGTTTC+CGG + chr3.2:75102856-75102875 None:intergenic 45.0%
!!! AATTATAATTCATTTTTTTT+TGG - chr3.2:75100963-75100982 MS.gene045063:intron 5.0%
!!! ATATATATATATGATTTTTA+TGG - chr3.2:75100928-75100947 MS.gene045063:intron 5.0%
ACAATGGATGGCCCCAGAAA+AGG - chr3.2:75102218-75102237 MS.gene045063:intron 50.0%
ACACCTTACACCAGTCGTTC+TGG - chr3.2:75103250-75103269 MS.gene045063:intron 50.0%
AGTGGAATGGGTGCATACCA+TGG - chr3.2:75104568-75104587 MS.gene045063:CDS 50.0%
CCACAAGCTGCACAAGGAAA+AGG + chr3.2:75104516-75104535 None:intergenic 50.0%
CTCATGTGAAGTCACGCTGA+AGG - chr3.2:75102188-75102207 MS.gene045063:CDS 50.0%
CTGTCCCTTGATCCAGTTGT+TGG - chr3.2:75102819-75102838 MS.gene045063:intron 50.0%
CTTGGAACAGGTGAACAAGC+TGG - chr3.2:75104274-75104293 MS.gene045063:intron 50.0%
GAGGCTGGAGCAATTTCTGA+TGG + chr3.2:75102879-75102898 None:intergenic 50.0%
GCTGCTATAGCTCCAACAAC+TGG + chr3.2:75102834-75102853 None:intergenic 50.0%
GGCATCAACCTGGAAATGAG+AGG + chr3.2:75103803-75103822 None:intergenic 50.0%
GTGGAATGGGTGCATACCAT+GGG - chr3.2:75104569-75104588 MS.gene045063:CDS 50.0%
GTTGTTGGAGCTATAGCAGC+CGG - chr3.2:75102834-75102853 MS.gene045063:intron 50.0%
TGCTGGCGAACTTATTAGGG+AGG - chr3.2:75102907-75102926 MS.gene045063:intron 50.0%
TGGCTATCCAGGAGAACTGA+AGG + chr3.2:75103380-75103399 None:intergenic 50.0%
TTGGACGACGAGAAGGTTTC+TGG - chr3.2:75103925-75103944 MS.gene045063:intron 50.0%
! ACTTTGCCATTTGGGGGAGT+TGG - chr3.2:75104541-75104560 MS.gene045063:CDS 50.0%
! AGGAAAGAGGTTGGACTAGG+CGG + chr3.2:75101848-75101867 None:intergenic 50.0%
! CCTTTTCCTTGTGCAGCTTG+TGG - chr3.2:75104513-75104532 MS.gene045063:intron 50.0%
! TTGATGAAGGCTCTAGTCGC+CGG - chr3.2:75104697-75104716 MS.gene045063:CDS 50.0%
!! ACCGTGATGATGGGAAGCAA+TGG + chr3.2:75104138-75104157 None:intergenic 50.0%
!! GGAGTTGGTGACAGTGGAAT+GGG - chr3.2:75104556-75104575 MS.gene045063:CDS 50.0%
!! GTTTGGTGCCTCTCATTTCC+AGG - chr3.2:75103792-75103811 MS.gene045063:intron 50.0%
AGTGGGACGGATAGTGATGG+CGG - chr3.2:75103217-75103236 MS.gene045063:CDS 55.0%
CTGTCACCAACTCCCCCAAA+TGG + chr3.2:75104550-75104569 None:intergenic 55.0%
GCTCCAGAACGACTGGTGTA+AGG + chr3.2:75103256-75103275 None:intergenic 55.0%
GGTGGTGTTTGACGGAGAAG+CGG - chr3.2:75100697-75100716 MS.gene045063:CDS 55.0%
! GTCGTTGGTGAAGGACCTGA+GGG - chr3.2:75100724-75100743 MS.gene045063:CDS 55.0%
!! ACACCAGTCGTTCTGGAGCT+TGG - chr3.2:75103257-75103276 MS.gene045063:intron 55.0%
!! CGACGAGAAGGTTTCTGGCA+AGG - chr3.2:75103930-75103949 MS.gene045063:intron 55.0%
!! GGGAGTTGGTGACAGTGGAA+TGG - chr3.2:75104555-75104574 MS.gene045063:CDS 55.0%
!! TTTGGGGGAGTTGGTGACAG+TGG - chr3.2:75104550-75104569 MS.gene045063:CDS 55.0%
CCTCCAAGCTCCAGAACGAC+TGG + chr3.2:75103263-75103282 None:intergenic 60.0%
CTAGTCGCCGGCGATGTTAC+TGG - chr3.2:75104709-75104728 MS.gene045063:CDS 60.0%
GTTCGCCAGCAGTGAAGACG+AGG + chr3.2:75102898-75102917 None:intergenic 60.0%
TATAGCAGCCGGAAACGCCG+TGG - chr3.2:75102845-75102864 MS.gene045063:intron 60.0%
TCCAGCCTCGTCTTCACTGC+TGG - chr3.2:75102890-75102909 MS.gene045063:intron 60.0%
! CGTCGTTGGTGAAGGACCTG+AGG - chr3.2:75100723-75100742 MS.gene045063:CDS 60.0%
!! CCAGTCGTTCTGGAGCTTGG+AGG - chr3.2:75103260-75103279 MS.gene045063:intron 60.0%
GCCAGCAGTGAAGACGAGGC+TGG + chr3.2:75102894-75102913 None:intergenic 65.0%
! AGCGGCGTCGTCGTTGGTGA+AGG - chr3.2:75100715-75100734 MS.gene045063:CDS 65.0%
CGGAGAAGCGGCGTCGTCGT+TGG - chr3.2:75100709-75100728 MS.gene045063:CDS 70.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 75100668 75104762 75100668 ID=MS.gene045063
chr3.2 mRNA 75100668 75104762 75100668 ID=MS.gene045063.t1;Parent=MS.gene045063
chr3.2 exon 75104532 75104762 75104532 ID=MS.gene045063.t1.exon1;Parent=MS.gene045063.t1
chr3.2 CDS 75104532 75104762 75104532 ID=cds.MS.gene045063.t1;Parent=MS.gene045063.t1
chr3.2 exon 75103191 75103259 75103191 ID=MS.gene045063.t1.exon2;Parent=MS.gene045063.t1
chr3.2 CDS 75103191 75103259 75103191 ID=cds.MS.gene045063.t1;Parent=MS.gene045063.t1
chr3.2 exon 75102982 75103078 75102982 ID=MS.gene045063.t1.exon3;Parent=MS.gene045063.t1
chr3.2 CDS 75102982 75103078 75102982 ID=cds.MS.gene045063.t1;Parent=MS.gene045063.t1
chr3.2 exon 75102407 75102613 75102407 ID=MS.gene045063.t1.exon4;Parent=MS.gene045063.t1
chr3.2 CDS 75102407 75102613 75102407 ID=cds.MS.gene045063.t1;Parent=MS.gene045063.t1
chr3.2 exon 75102108 75102223 75102108 ID=MS.gene045063.t1.exon5;Parent=MS.gene045063.t1
chr3.2 CDS 75102108 75102223 75102108 ID=cds.MS.gene045063.t1;Parent=MS.gene045063.t1
chr3.2 exon 75101696 75101800 75101696 ID=MS.gene045063.t1.exon6;Parent=MS.gene045063.t1
chr3.2 CDS 75101696 75101800 75101696 ID=cds.MS.gene045063.t1;Parent=MS.gene045063.t1
chr3.2 exon 75101444 75101616 75101444 ID=MS.gene045063.t1.exon7;Parent=MS.gene045063.t1
chr3.2 CDS 75101444 75101616 75101444 ID=cds.MS.gene045063.t1;Parent=MS.gene045063.t1
chr3.2 exon 75101275 75101365 75101275 ID=MS.gene045063.t1.exon8;Parent=MS.gene045063.t1
chr3.2 CDS 75101275 75101365 75101275 ID=cds.MS.gene045063.t1;Parent=MS.gene045063.t1
chr3.2 exon 75100997 75101146 75100997 ID=MS.gene045063.t1.exon9;Parent=MS.gene045063.t1
chr3.2 CDS 75100997 75101146 75100997 ID=cds.MS.gene045063.t1;Parent=MS.gene045063.t1
chr3.2 exon 75100668 75100901 75100668 ID=MS.gene045063.t1.exon10;Parent=MS.gene045063.t1
chr3.2 CDS 75100668 75100901 75100668 ID=cds.MS.gene045063.t1;Parent=MS.gene045063.t1
Gene Sequence

>MS.gene045063

ATGTCGGGTGAAGATCAGTCACAGAAGAAGGTGGTGTTTGACGGAGAAGCGGCGTCGTCGTTGGTGAAGGACCTGAGGGTGAGCTTTAATTCTGGTAAGACACGAAGTTATGAATGGAGAGTATCGCAGGTGAAAGCTCTTTTGAAGATGGTTGATGAACAACAGGATCAAATCATTGATGCTCTTCGTTCTGACCTTGCTAAACCACCGCTTGAAACTGTTGTCTACGAGGTACCTAATTTCATGTTTAAGTTGCTTTCATATATATATATGATTTTTATGGTCTCTCTTTTTAAATTATAATTCATTTTTTTTTGGTACGTGCAATTGAAATCGATAGAAGAGCTAGAGAATCAAGTTTTTTGTTATAACATAAACATCATAAGTTTTCAAGGCTGAGATATTCTTGAGATTTTTCATTTGGAGTCACTATTATGATGGCAACCGTTCCGACGATACAATTACTTTGATTTTTTTTCCTTGTATGACGTCAATATTTTATGTTTTCTTTAATAAAGGAGGAAACATGCTTTTCACTTTTTCCCTTCAAAAAGAAAAATGCTTTTCACCTTCTTTTTTTTTTACGGAACATGCTTTTCACTTGAACGATCACATTAAAGTTACTTCACAATCACGTAAATACAAGTCACGGAAACCAGGATGCTTCTTAAAAGACAGGGACAAGAAGGCGCTAATTTATTCAATGGAGGAATAAAACTTCCTAGGCATAATAAATTGGTTTGGTTTGGTTTTTATGAGAAAAGAAATCTAAATCAATTTGTTAGGAAATTTGAAAGTTAGTAGATAATTTGACCAATAGTTTTCGATATATAGCGATACTCTTTCTTTCAAATGATCGATCAAAGAATTGTGAGAACTAAAGTGTTCTGGAAAATATAAGTAAAAGGTGTATGTAAAATAAGGGTAAATTACAAGAAAAATAAACTTTGATTGACTGGTGTGTATGTAAAATGTTTTTTACAATGAGTAGTTGGAGATAAAAATGTTAAAGCTAAATCCTAATAGCCATAACTTTGGTTGACACAATATGCGCTCAGCTCAACTTGCGTATTAGTGTGAGACTGTGGCATGCCAATGCCTGCGTAGCATTTTCAAGTTACTCGCGAAATTCGCATGGTCATGTGTGAGTGTGCCTCTTGACCGTGCTTAAAATTAGCCGCCTAGTCCAACCTCTTTCCTTTTTACTAAATGGACTCCGTAGCAGTTGAGAAAAACTCGGTTATACTATTCTCAACTACATTGGATTCAACTTAAAATATTTTTGGGTTTAAAAATTTAGTATCCCTTGGTTTCATTTCACTCAATGACACCGCTTTCCATAAATTCAAAATAGAGTAACCGAACATTTTGTAACATTTGTAACTAAACAAACATATTTTGGATGAATACAACTAAGCAATTGACAGGTCAATGTTGCAATCAATACAACTATAATAAAGATAATTTTCCTTCTACTCTTCACTGATGTACTTTGTTTTGCAGATTGGTATGTTTAAAAACTCATGTGAAGTCACGCTGAAGGAATTGAAACAATGGATGGCCCCAGAAAAGGTTTATTTTACCCCAATTTCTTCAGCTGAGAAGGACATTTTTCATTTATATTTCTTATATATAGTTTATTTGAATATTTTTATAACAAAAAGTTCCTTTAATAATATTTCAGGCTAAAACTTCAATCACGACTTTTCCTTCTTCAGCTGAAATAGTACCTGAACCACTTGGTGTAGTGTTAGTCATCTCTGCTTGGAACTATCCATTTTGTAAGTTGACCTTCAGCATGATTGGTTTGACTTATTTGAGTTTATTTACTTACACCAACATTCTTGAGACTGTTTAGTAGAACTTATATTGAAACAACTTATATGCAAGTCTACAAGCTGTTTTTGACTTATTTCCATAAATTTTTCACGATATCTTATAAAAACAGTTTGACTTTATTTTACCTTTTGTTATACAAATGGCTTATACATAGACACTTATATGATAAATGTGTATGCTATAAACACTTCATTCAGTTGTTTAACAGAACAGAACCTTGTTGGTTGTATTTGAGTTAATATTTTGAGCCTTTAGTTTCTTTAATAATCTATGAAGACTATAATATCACTCTCTCTGTCTGTCTTTTCAGTGCTGTCCCTTGATCCAGTTGTTGGAGCTATAGCAGCCGGAAACGCCGTGGTTCTAAAACCATCAGAAATTGCTCCAGCCTCGTCTTCACTGCTGGCGAACTTATTAGGGAGGTACATGGATAACTCATCTATAAGAGTTGTGGAGGGGGCCGTTGATGAAACTACTGCATTGTTGCAACAAAAGTGGGACAAAATTTTGTATACAGGTTGGTCTTGTTTATCACCAGTCTGTTTTTCTTGGATGGTTATGAATTGTTATTTTGGTTTTGTCGTGCAATTGGTATGCCATTATTGGTATTGTGAATTTTGAAATCTCATCTCAGATAATCAAATAAATACATCATTTGAACAAAAAGATTTCATAGCATAAGTAATTACTTGATTTTCAGGTAATGGAAAAGTGGGACGGATAGTGATGGCGGCTGCTGCAAAACACCTTACACCAGTCGTTCTGGAGCTTGGAGGAAAATCTCCAACTGTTGTGGATTCAAATGTCAATTTAGAGGTATTGATTAAGGCCATGTTTGGATTGACTTATTAAGTTGTTATCAAGTTATTTCCTTCAGTTCTCCTGGATAGCCATTGAAAACAATTTAACTTTATTTTATCTTTTATTATAAAAAAACCTTACACATGAAAGCAATATGACAAATCGACAAGTGTTTATGTTATAAGCGTTTAATTAAATTTTTCATCCAATCAGGTTCTAAGTCTTAGCCTTCTTTTTTATTTTCCAGTCAGTAACTAGTTATATCACTTTGATCTCCTTCCCCTTAACTCATTATTGACTTAAATTAATTTGTGTTTACTAGGTTACAGCTAGACGGATAATTTCAGGAAAGTGGTGCTGTAACAATGGACAAGCCTGCATTTCTCCTGATTACGTTATAACAACAAAAGACTTTGCCCCCAAATTGGTATGAAATTTTCCCTCGTTGTTAAGAGTTCTAAATATCTGTCTTTGTGTATCTAATGTTTGGTGCCTCTCATTTCCAGGTTGATGCCTTAAAGACAGAATTGGAAAGCTTCTTTGGAAAGAATCCAATAGAATCCAATGATTTATCGCGCATTGTGAGTTCTAACCACTTTGCTCGCTTGGTAAAGATGTTGGACGACGAGAAGGTTTCTGGCAAGGTTGTTTATGGAGGTGAAAAGGATGAAAACAAACTGTAAGCTCTCCTCTTAATTCAAGTTTAGTAGGTTTTATATACTGCAATGCAATGGATCTTGACACAAGCAAATTACAGGAGGATTGCTCCCACTATTGTATTAGACGCTCCACAAGATTCTCTGATAATGAGTGAGGAGATCTTTGGTCCATTGCTTCCCATCATCACGGTAAGAATAAAAGACACAAAGAACTCTTTGAAAAGTACTCAAATATTCATCGATAAGCTTCATTAGCTTGTATCCAATTTAAAACAATGGGGCATCAATTATAATACTTTCTTTCTTGCTTGGAACAGGTGAACAAGCTGGAAGAAAGCTTCGATTTGATCAACGCAGGAACAAAGCCACTTGCTGCATATTTATTTACAAATGACAACAAGTTCAAGGAGCAATTTGTGAAGAATGTTTCTGCTGGGGGTTTGCTTATCAATGACACTGTCTTACATGTAATAGTTTGTTTTTTATTTTCTAAAACCTTTCCATGAATGCATATATCCTTATCATGCAATGTTACTTATATCTTTTCCTTTTCCTTGTGCAGCTTGTGGTTCATACTTTGCCATTTGGGGGAGTTGGTGACAGTGGAATGGGTGCATACCATGGGAAATTCTCCTTTGACGCTTTTACTCACAAAAAGGCAGTTCTTTACCGTGGTTTTACGGGTGATGCATCGATAAGGTACCCGCCTTACACTGATACAAAGCAGAAATTGATGAAGGCTCTAGTCGCCGGCGATGTTACTGGTGTTGTTCGTGCTCTTTTTGGATGGTCCTAA
Protein sequence

>MS.gene045063.t1

MSGEDQSQKKVVFDGEAASSLVKDLRVSFNSGKTRSYEWRVSQVKALLKMVDEQQDQIIDALRSDLAKPPLETVVYEIGMFKNSCEVTLKELKQWMAPEKAKTSITTFPSSAEIVPEPLGVVLVISAWNYPFLLSLDPVVGAIAAGNAVVLKPSEIAPASSSLLANLLGRYMDNSSIRVVEGAVDETTALLQQKWDKILYTGNGKVGRIVMAAAAKHLTPVVLELGGKSPTVVDSNVNLEVTARRIISGKWCCNNGQACISPDYVITTKDFAPKLVDALKTELESFFGKNPIESNDLSRIVSSNHFARLVKMLDDEKVSGKVVYGGEKDENKLRIAPTIVLDAPQDSLIMSEEIFGPLLPIITVNKLEESFDLINAGTKPLAAYLFTNDNKFKEQFVKNVSAGGLLINDTVLHLVVHTLPFGGVGDSGMGAYHGKFSFDAFTHKKAVLYRGFTGDASIRYPPYTDTKQKLMKALVAGDVTGVVRALFGWS