AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene62087


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene62087.t1 MTR_4g131180 99.194 496 4 0 1 496 1 496 0.0 1013
MS.gene62087.t1 MTR_1g014320 90.121 496 49 0 1 496 1 496 0.0 941
MS.gene62087.t1 MTR_4g131180 99.129 459 4 0 1 459 1 459 0.0 939
MS.gene62087.t1 MTR_2g067660 31.130 469 306 7 22 482 53 512 3.13e-71 236
MS.gene62087.t1 MTR_3g078490 34.820 471 280 10 17 469 39 500 1.24e-61 211
MS.gene62087.t1 MTR_3g078550 33.898 472 283 11 17 469 9 470 2.52e-60 206
MS.gene62087.t1 MTR_8g064170 31.352 488 307 10 21 493 66 540 3.10e-60 207
MS.gene62087.t1 MTR_4g106510 31.838 468 298 9 17 469 9 470 2.07e-55 193
MS.gene62087.t1 MTR_8g083530 27.835 485 320 8 17 485 24 494 8.18e-55 191
MS.gene62087.t1 MTR_3g078550 34.163 442 262 11 47 469 9 440 2.89e-54 189
MS.gene62087.t1 MTR_4g107040 28.571 497 317 10 17 493 65 543 1.34e-52 186
MS.gene62087.t1 MTR_3g078170 29.508 488 316 11 21 493 67 541 1.76e-52 186
MS.gene62087.t1 MTR_6g086340 29.363 487 321 10 17 489 21 498 4.15e-52 184
MS.gene62087.t1 MTR_6g086300 28.689 488 312 10 17 485 23 493 1.46e-51 182
MS.gene62087.t1 MTR_6g086300 28.689 488 312 10 17 485 23 493 1.46e-51 182
MS.gene62087.t1 MTR_2g034160 29.314 481 302 13 29 485 62 528 4.13e-47 172
MS.gene62087.t1 MTR_2g009750 29.400 483 310 12 22 487 20 488 4.00e-46 168
MS.gene62087.t1 MTR_2g009750 29.400 483 310 12 22 487 21 489 4.50e-46 168
MS.gene62087.t1 MTR_2g009750 29.339 484 310 12 22 487 21 490 4.96e-46 168
MS.gene62087.t1 MTR_8g083520 27.044 477 301 9 17 485 15 452 3.09e-45 165
MS.gene62087.t1 MTR_8g064170 28.689 488 288 11 21 493 66 508 1.20e-44 164
MS.gene62087.t1 MTR_4g093170 27.673 477 319 10 22 483 48 513 1.08e-43 162
MS.gene62087.t1 MTR_3g078490 35.398 339 200 8 17 343 9 340 2.26e-40 149
MS.gene62087.t1 MTR_3g078170 29.648 398 261 9 21 407 67 456 2.02e-39 149
MS.gene62087.t1 MTR_8g083520 29.446 343 206 5 148 485 61 372 3.34e-38 144
MS.gene62087.t1 MTR_1399s0020 29.118 340 187 6 160 493 55 346 1.58e-34 133
MS.gene62087.t1 MTR_3g078170 30.599 317 205 6 21 330 67 375 2.52e-32 128
MS.gene62087.t1 MTR_3g078170 30.599 317 205 6 21 330 67 375 3.01e-32 128
MS.gene62087.t1 MTR_1222s0010 31.129 363 223 13 56 407 6 352 1.04e-30 126
MS.gene62087.t1 MTR_2g042330 24.280 486 342 14 19 490 25 498 1.42e-30 124
MS.gene62087.t1 MTR_1690s0010 27.405 343 236 6 17 353 10 345 3.09e-30 121
MS.gene62087.t1 MTR_8g083530 26.829 328 215 5 17 332 24 338 3.47e-30 121
MS.gene62087.t1 MTR_2g097950 26.966 445 281 15 44 467 14 435 1.91e-26 112
MS.gene62087.t1 MTR_3g088150 25.764 458 313 12 39 485 7 448 1.17e-25 110
MS.gene62087.t1 MTR_8g094600 26.107 429 282 13 53 467 74 481 1.84e-25 110
MS.gene62087.t1 MTR_1g029840 25.231 432 298 10 46 468 14 429 7.34e-25 107
MS.gene62087.t1 MTR_1g029840 25.513 439 300 11 41 468 7 429 7.41e-25 107
MS.gene62087.t1 MTR_8g076480 26.118 425 287 11 53 467 14 421 1.02e-22 101
MS.gene62087.t1 MTR_2g097950 24.829 439 263 14 44 467 14 400 6.50e-18 86.7
MS.gene62087.t1 MTR_1314s0010 27.545 334 205 10 158 468 1 320 2.32e-17 84.0
MS.gene62087.t1 MTR_4g065040 28.618 304 196 11 158 448 105 400 4.90e-16 80.9
MS.gene62087.t1 MTR_4g107940 25.070 355 232 13 22 360 57 393 3.35e-13 72.4
MS.gene62087.t1 MTR_4g107940 25.070 355 232 13 22 360 57 393 4.20e-13 71.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene62087.t1 AT2G24270 89.718 496 51 0 1 496 41 536 0.0 939
MS.gene62087.t1 AT2G24270 89.718 496 51 0 1 496 1 496 0.0 939
MS.gene62087.t1 AT2G24270 89.718 496 51 0 1 496 1 496 0.0 938
MS.gene62087.t1 AT2G24270 89.718 496 51 0 1 496 1 496 0.0 938
MS.gene62087.t1 AT1G74920 34.990 483 283 12 17 477 9 482 2.66e-70 233
MS.gene62087.t1 AT1G74920 34.783 483 279 13 17 477 9 477 4.20e-68 227
MS.gene62087.t1 AT1G79440 31.130 469 306 6 22 482 59 518 2.31e-65 220
MS.gene62087.t1 AT3G48170 30.913 482 304 12 17 477 9 482 4.53e-61 208
MS.gene62087.t1 AT3G48000 30.426 493 305 11 21 493 63 537 2.86e-58 202
MS.gene62087.t1 AT1G23800 30.642 483 315 9 22 493 60 533 5.62e-58 201
MS.gene62087.t1 AT3G24503 28.778 483 325 8 17 488 21 495 5.98e-54 189
MS.gene62087.t1 AT3G66658 29.072 485 315 13 3 467 35 510 1.63e-46 170
MS.gene62087.t1 AT3G66658 28.980 490 309 14 3 467 35 510 3.88e-46 170
MS.gene62087.t1 AT2G14170 28.512 477 315 11 22 483 11 476 5.10e-43 159
MS.gene62087.t1 AT2G14170 28.692 474 314 10 22 482 120 582 2.52e-42 159
MS.gene62087.t1 AT2G14170 28.512 477 315 11 22 483 120 585 4.41e-42 159
MS.gene62087.t1 AT1G23800 30.696 316 204 6 22 330 60 367 8.06e-34 132
MS.gene62087.t1 AT1G54100 24.898 490 328 13 19 487 24 494 8.19e-34 134
MS.gene62087.t1 AT1G54100 24.898 490 328 13 19 487 24 494 8.19e-34 134
MS.gene62087.t1 AT1G44170 25.352 426 301 12 51 468 9 425 4.31e-25 108
MS.gene62087.t1 AT1G44170 25.352 426 301 12 51 468 9 425 4.31e-25 108
MS.gene62087.t1 AT1G44170 26.814 317 223 7 158 468 49 362 8.25e-25 107
MS.gene62087.t1 AT4G34240 24.362 431 289 11 53 468 65 473 9.38e-23 102
MS.gene62087.t1 AT4G34240 24.362 431 289 11 53 468 80 488 9.53e-23 102
MS.gene62087.t1 AT4G34240 26.814 317 223 6 158 468 33 346 8.01e-21 95.1
MS.gene62087.t1 AT4G36250 27.245 323 215 10 158 467 108 423 3.28e-20 94.0
MS.gene62087.t1 AT5G62530 23.714 350 235 14 19 353 56 388 1.70e-14 76.3
MS.gene62087.t1 AT4G34240 24.127 315 204 9 53 354 80 372 5.32e-14 73.9

Find 136 sgRNAs with CRISPR-Local

Find 276 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCCTTCTCTCTTGTATTCT+TGG 0.177591 8.2:-4018245 None:intergenic
CACCAAGCCTTCAATGAAAT+TGG 0.219619 8.2:-4018190 None:intergenic
CTTGGAAGTGAGGCAATATT+TGG 0.238356 8.2:-4016309 None:intergenic
GTTGCTGCAAACATTATAAA+AGG 0.248305 8.2:+4017545 MS.gene62087:CDS
TCTCATTTGGCCTTTGCTAT+TGG 0.249553 8.2:+4018269 MS.gene62087:CDS
CTCCCAAGAGGAAGTTAATA+AGG 0.272304 8.2:+4015906 MS.gene62087:CDS
GGTCTAATCAGCTGTGTTAC+TGG 0.308486 8.2:+4017268 MS.gene62087:CDS
TGCTAGCAACTTTGGACTTC+AGG 0.313262 8.2:+4018395 MS.gene62087:CDS
TATTGAGGCTTTCTTGTAGT+AGG 0.325145 8.2:-4014972 None:intergenic
ACAGAATTGATCCTAATTAC+AGG 0.326513 8.2:-4018348 None:intergenic
GATTCCGTTACAAATGGAAT+TGG 0.329253 8.2:+4017475 MS.gene62087:CDS
GGTATAAAAGACAGTGGAAT+TGG 0.332029 8.2:+4019334 MS.gene62087:CDS
TATTTGGTCCTTTCATTTCC+CGG 0.335147 8.2:-4016293 None:intergenic
CTTTGCTATTGGATAATGTT+AGG 0.338290 8.2:+4018280 MS.gene62087:CDS
TTGCAGCTTTGTGTTCTTTG+AGG 0.338729 8.2:-4016017 None:intergenic
ATTGCTCCTGCACTCATTGC+TGG 0.338801 8.2:+4016701 MS.gene62087:CDS
GAAGAAGGAGTAAGGATTCT+TGG 0.343223 8.2:+4016239 MS.gene62087:CDS
TCTTGGAGAGGGAAAGTTCT+TGG 0.345028 8.2:+4016256 MS.gene62087:CDS
GTTCATTGCTTTCACTTGGC+TGG 0.348410 8.2:+4017235 MS.gene62087:CDS
AGAGGAAGTTAATAAGGTTA+TGG 0.352924 8.2:+4015912 MS.gene62087:CDS
TGAAGATGCTGACCTTGATT+TGG 0.358975 8.2:+4017523 MS.gene62087:CDS
AACACAGCTGATTAGACCTT+TGG 0.359110 8.2:-4017263 None:intergenic
CATTGTAATGCTAGCAACTT+TGG 0.359882 8.2:+4018387 MS.gene62087:CDS
ATCCAGGAGTGAACTGTATA+AGG 0.361239 8.2:+4017326 MS.gene62087:CDS
ATCCTAATTACAGGCAAAAC+TGG 0.370576 8.2:-4018339 None:intergenic
TCCCATGCAATTCTCATGTC+TGG 0.371621 8.2:-4018303 None:intergenic
CATGGTTCATTGCTTTCACT+TGG 0.375400 8.2:+4017231 MS.gene62087:CDS
AGATTGACTGGATAGTTAAA+AGG 0.381527 8.2:-4016665 None:intergenic
AGCCAATTTCATTGAAGGCT+TGG 0.386673 8.2:+4018188 MS.gene62087:CDS
AAATGATCTGGCCCACGAGC+TGG 0.391227 8.2:-4019077 None:intergenic
ATTAGTGATGCAATGGAATC+AGG 0.394652 8.2:+4019032 MS.gene62087:CDS
ATGGCTAAGATCACTCCTAA+TGG 0.394955 8.2:-4016638 None:intergenic
TTTATAAGTTTCACCTGAAA+GGG 0.396189 8.2:-4019101 None:intergenic
TAACCTTATTAACTTCCTCT+TGG 0.406814 8.2:-4015909 None:intergenic
GGAATCAGTTGCTGATAGTT+TGG 0.407889 8.2:+4018077 MS.gene62087:CDS
TCATCAGCCAATTTCATTGA+AGG 0.421085 8.2:+4018183 MS.gene62087:CDS
GGTTGTAAGATCTGGTGATT+TGG 0.422138 8.2:+4016202 MS.gene62087:intron
TACTGCTGTTAAGGTTGTCT+TGG 0.427731 8.2:+4018050 MS.gene62087:CDS
GCTGATGATTCTGATACAAC+TGG 0.428644 8.2:-4018168 None:intergenic
ATTGCATGGGAGGAGCCATT+TGG 0.428782 8.2:+4018315 MS.gene62087:CDS
TCAGAGGTGTACTGCTGTTA+AGG 0.430225 8.2:+4018041 MS.gene62087:CDS
TCAATGAAGGTTGTAAGATC+TGG 0.431004 8.2:+4016194 MS.gene62087:intron
AACCTTATTAACTTCCTCTT+GGG 0.435727 8.2:-4015908 None:intergenic
AGGATATAAATTACCTGAGT+TGG 0.437333 8.2:-4016746 None:intergenic
AGCTTCACTGGTGGAGATAC+CGG 0.437992 8.2:+4017425 MS.gene62087:intron
AGAGAGAAGGGAATCTCATT+TGG 0.440505 8.2:+4018256 MS.gene62087:CDS
AATGATCTGGCCCACGAGCT+GGG 0.441052 8.2:-4019076 None:intergenic
TGTCATCATGTTTATGCTGT+TGG 0.446435 8.2:-4019371 None:intergenic
ACTGGCAAAGGCTCGGAGAT+TGG 0.449931 8.2:+4017286 MS.gene62087:CDS
GCCAAGCCCTTCTTATACCA+TGG 0.453850 8.2:+4019420 MS.gene62087:CDS
TGGCTAAGATCACTCCTAAT+GGG 0.455898 8.2:-4016637 None:intergenic
CGGCATTGCAATTTCAAAGA+AGG 0.458206 8.2:+4017445 MS.gene62087:CDS
ACACAGCTGATTAGACCTTT+GGG 0.458219 8.2:-4017262 None:intergenic
CTTCTTTGAAATTGCAATGC+CGG 0.461936 8.2:-4017444 None:intergenic
ATTGAGGCTTTCTTGTAGTA+GGG 0.466187 8.2:-4014971 None:intergenic
TTACCTTGAACTTTGTATTG+AGG 0.467120 8.2:-4014987 None:intergenic
ATTCCGTTACAAATGGAATT+GGG 0.467485 8.2:+4017476 MS.gene62087:CDS
ACCTGAAAGGGAAAATGATC+TGG 0.469238 8.2:-4019089 None:intergenic
AAGCCTCAATACAAAGTTCA+AGG 0.469357 8.2:+4014984 MS.gene62087:CDS
AATATTATGCTGATGGAGAA+TGG 0.471141 8.2:+4014910 MS.gene62087:CDS
GTTTCTTACTGTGCTGAAGA+AGG 0.471237 8.2:+4016224 MS.gene62087:CDS
AGGATCAATTCTGTTGAAGA+AGG 0.476795 8.2:+4018357 MS.gene62087:CDS
AACATCTCCGTCTAAAATCT+CGG 0.486907 8.2:-4014883 None:intergenic
ACAGGCAAAACTGGTCCAAA+TGG 0.487090 8.2:-4018330 None:intergenic
TTTGAGACAGCAAGATTGAC+TGG 0.493697 8.2:-4016677 None:intergenic
ATATAAATTACCTGAGTTGG+AGG 0.495354 8.2:-4016743 None:intergenic
TCACTCCTGGATGCATTGTA+AGG 0.496013 8.2:-4017315 None:intergenic
TATTAGCCCATGGTATAAGA+AGG 0.496914 8.2:-4019427 None:intergenic
CAAAATCAGCACAAAAGTCA+TGG 0.497875 8.2:+4015941 MS.gene62087:CDS
TGTTAAGGTTGTCTTGGTAA+TGG 0.498386 8.2:+4018056 MS.gene62087:CDS
CACCTTATACAGTTCACTCC+TGG 0.499695 8.2:-4017328 None:intergenic
TTGCTATCCGATAGCTTCAC+TGG 0.502581 8.2:+4017413 MS.gene62087:intron
AGCTGTTGCAGCTCTTCACA+TGG 0.503024 8.2:+4017213 MS.gene62087:CDS
GGAGTAAGGATTCTTGGAGA+GGG 0.504125 8.2:+4016245 MS.gene62087:CDS
CAAAGACCCCACTTTGGAAG+AGG 0.506615 8.2:+4015965 MS.gene62087:CDS
ATCAGCTGTGTTACTGGCAA+AGG 0.512241 8.2:+4017274 MS.gene62087:CDS
TGTGCTCAAGCCTCCAACTC+AGG 0.519656 8.2:+4016733 MS.gene62087:CDS
AGGAGTAAGGATTCTTGGAG+AGG 0.519697 8.2:+4016244 MS.gene62087:CDS
GTTTACAAATATTATGCTGA+TGG 0.519827 8.2:+4014903 MS.gene62087:CDS
AGGCATGATTCCGTTACAAA+TGG 0.524495 8.2:+4017469 MS.gene62087:CDS
GAATGGAAGAAATCTACCTC+TGG 0.525185 8.2:+4014927 MS.gene62087:CDS
GTGATATCACAGTCATCCTC+AGG 0.527858 8.2:-4018144 None:intergenic
CCAAGCCCTTCTTATACCAT+GGG 0.527974 8.2:+4019421 MS.gene62087:CDS
CCTCCCAATTCCATTTGTAA+CGG 0.528245 8.2:-4017479 None:intergenic
GCTTTGCTATTTCTTTGACT+AGG 0.532020 8.2:-4016050 None:intergenic
AGACAGTGGAATTGGATCAC+AGG 0.536723 8.2:+4019342 MS.gene62087:CDS
GAATTTCCAGCAATGAGTGC+AGG 0.537751 8.2:-4016707 None:intergenic
ACTGTGCTGAAGAAGGAGTA+AGG 0.539338 8.2:+4016231 MS.gene62087:CDS
ATAAATTCTGCCCCAGCTCG+TGG 0.539359 8.2:+4019065 MS.gene62087:CDS
TGCCAAGAATACAAGAGAGA+AGG 0.540006 8.2:+4018243 MS.gene62087:CDS
GCCAAGAATACAAGAGAGAA+GGG 0.542461 8.2:+4018244 MS.gene62087:CDS
GTGAATGATGCTAAACAGAA+AGG 0.552242 8.2:+4018210 MS.gene62087:CDS
ATTGCAATTTCAAAGAAGGC+AGG 0.554951 8.2:+4017449 MS.gene62087:CDS
CTGTGTTACTGGCAAAGGCT+CGG 0.559016 8.2:+4017279 MS.gene62087:CDS
CAAATATTGCCTCACTTCCA+AGG 0.562000 8.2:+4016310 MS.gene62087:CDS
GCTGCAAACATTATAAAAGG+AGG 0.564563 8.2:+4017548 MS.gene62087:CDS
TGAAATAGACCTTGGAAGTG+AGG 0.565780 8.2:-4016319 None:intergenic
GACAGTGGAATTGGATCACA+GGG 0.567866 8.2:+4019343 MS.gene62087:CDS
TGTTTGCAGCAACCAAATCA+AGG 0.571187 8.2:-4017535 None:intergenic
ATGATCTGGCCCACGAGCTG+GGG 0.571612 8.2:-4019075 None:intergenic
GTTCAGCCCTCTTCCAAAGT+GGG 0.573357 8.2:-4015972 None:intergenic
GACTTCCTTACAATGCATCC+AGG 0.575105 8.2:+4017310 MS.gene62087:CDS
ATTAGCCCATGGTATAAGAA+GGG 0.576461 8.2:-4019426 None:intergenic
CATGGGCAAAGACCCCACTT+TGG 0.577477 8.2:+4015959 MS.gene62087:CDS
GGCCAGACATGAGAATTGCA+TGG 0.578690 8.2:+4018301 MS.gene62087:CDS
CTGATGATTCTGATACAACT+GGG 0.582007 8.2:-4018167 None:intergenic
GGTTGAGAAAGTGAAGGCTA+AGG 0.585982 8.2:+4018098 MS.gene62087:CDS
AAAATCAGCACAAAAGTCAT+GGG 0.588574 8.2:+4015942 MS.gene62087:CDS
AAAGACCCCACTTTGGAAGA+GGG 0.592379 8.2:+4015966 MS.gene62087:CDS
AAGGTGGCAAAACTAAGTGT+TGG 0.592797 8.2:+4018117 MS.gene62087:CDS
TGGATAGTTAAAAGGCGGAA+TGG 0.594322 8.2:-4016657 None:intergenic
CCCATGGTATAAGAAGGGCT+TGG 0.597949 8.2:-4019421 None:intergenic
TAAATTCTGCCCCAGCTCGT+GGG 0.599729 8.2:+4019066 MS.gene62087:CDS
AGTTCAGCCCTCTTCCAAAG+TGG 0.601662 8.2:-4015973 None:intergenic
GCCAGACATGAGAATTGCAT+GGG 0.604840 8.2:+4018302 MS.gene62087:CDS
AATGATGATTAGTGATGCAA+TGG 0.607091 8.2:+4019025 MS.gene62087:CDS
AGTTGCTAGCATTACAATGG+TGG 0.608323 8.2:-4018383 None:intergenic
AGCAAAAGATGCAGTTACAG+AGG 0.611642 8.2:+4016074 MS.gene62087:CDS
TGAGAAAGTGAAGGCTAAGG+TGG 0.619750 8.2:+4018101 MS.gene62087:CDS
AGACATGAGAATTGCATGGG+AGG 0.621616 8.2:+4018305 MS.gene62087:CDS
TTCAGCCCTCTTCCAAAGTG+GGG 0.625906 8.2:-4015971 None:intergenic
CCATGCAGCTTGCTCCCAAG+AGG 0.628360 8.2:+4015894 MS.gene62087:intron
AATATGCTATTATTAGCCCA+TGG 0.629261 8.2:-4019437 None:intergenic
CCGTTACAAATGGAATTGGG+AGG 0.629301 8.2:+4017479 MS.gene62087:CDS
TAGTTTGGTTGAGAAAGTGA+AGG 0.632684 8.2:+4018092 MS.gene62087:CDS
AGGGCTTGGCAAGTTTATCA+CGG 0.633923 8.2:-4019407 None:intergenic
CAAAGTTGCTAGCATTACAA+TGG 0.639762 8.2:-4018386 None:intergenic
ACTAAGTGTTGGACCACCTG+AGG 0.649624 8.2:+4018128 MS.gene62087:CDS
GAGGGCTGAACTTCTTCACA+AGG 0.649776 8.2:+4015984 MS.gene62087:CDS
CTATCCGATAGCTTCACTGG+TGG 0.653530 8.2:+4017416 MS.gene62087:intron
TCAGGGATGTGTGTTCACAA+AGG 0.663222 8.2:+4018989 MS.gene62087:intron
TTGACTGGATAGTTAAAAGG+CGG 0.663722 8.2:-4016662 None:intergenic
TCACAGGGTATAAAAGACAG+TGG 0.671884 8.2:+4019328 MS.gene62087:intron
CTAACATTATCCAATAGCAA+AGG 0.679429 8.2:-4018279 None:intergenic
ATATCACAGTCATCCTCAGG+TGG 0.693050 8.2:-4018141 None:intergenic
TGATGATTCTGATACAACTG+GGG 0.745364 8.2:-4018166 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAATTTTTTTATGAAAAG+TGG + chr8.2:4018018-4018037 MS.gene62087:intron 10.0%
!!! TTTTTAAATTTTTTCAATGA+AGG + chr8.2:4016181-4016200 MS.gene62087:intron 10.0%
!! ACTTTATAAAGTCAATAAAT+TGG + chr8.2:4016427-4016446 MS.gene62087:intron 15.0%
!! ATTTACTTCATAAATATAAC+CGG + chr8.2:4017648-4017667 MS.gene62087:intron 15.0%
!! CATATCATTAAATTAATGTT+TGG - chr8.2:4018840-4018859 None:intergenic 15.0%
!! TAAAAAAAAAATGATTTCAG+AGG - chr8.2:4018776-4018795 None:intergenic 15.0%
!! TACAAAGTAACTAAAATAAA+AGG - chr8.2:4015039-4015058 None:intergenic 15.0%
!!! AAAACACTTTATTTTTAACT+TGG - chr8.2:4018657-4018676 None:intergenic 15.0%
!!! CTGAAATCATTTTTTTTTTA+GGG + chr8.2:4018776-4018795 MS.gene62087:intron 15.0%
!!! TCTGAAATCATTTTTTTTTT+AGG + chr8.2:4018775-4018794 MS.gene62087:intron 15.0%
!!! TTTATTTTGGTTTCTTTTAA+CGG - chr8.2:4017117-4017136 None:intergenic 15.0%
!!! TTTTGTTGTTTTTGTAATTT+TGG - chr8.2:4019266-4019285 None:intergenic 15.0%
!! AATACCAAATATACACAAAA+TGG - chr8.2:4019133-4019152 None:intergenic 20.0%
!! ACTTGTAAATTAAATGATCA+TGG + chr8.2:4016533-4016552 MS.gene62087:intron 20.0%
!! ATATTTATGAAGTAAATGCA+TGG - chr8.2:4017645-4017664 None:intergenic 20.0%
!! ATTAGAATTTAATTCATGCA+CGG - chr8.2:4018901-4018920 None:intergenic 20.0%
!! ATTGTAAAGAATCATCAAAA+CGG - chr8.2:4015637-4015656 None:intergenic 20.0%
!! CATGTTAAATAAAATTACCT+CGG + chr8.2:4015519-4015538 MS.gene62087:intron 20.0%
!! CTTATTAAGAAAACAGTTTA+TGG - chr8.2:4016958-4016977 None:intergenic 20.0%
!! TTAGCAGTTATATGAATAAA+CGG - chr8.2:4017865-4017884 None:intergenic 20.0%
!! TTGCAATTTAAATACATTCA+TGG - chr8.2:4017686-4017705 None:intergenic 20.0%
!! TTTGTGTATATTTGGTATTA+CGG + chr8.2:4019134-4019153 MS.gene62087:intron 20.0%
!!! AAACTCATTTTAGTATTAGA+AGG - chr8.2:4018481-4018500 None:intergenic 20.0%
!!! AACTCAAACTATTTTCATAT+AGG + chr8.2:4016932-4016951 MS.gene62087:intron 20.0%
!!! CTGACATAAACTTTTTATTT+TGG - chr8.2:4017130-4017149 None:intergenic 20.0%
!!! GACTTCAAAATTTTATAACA+AGG + chr8.2:4015153-4015172 MS.gene62087:intron 20.0%
!!! GTAATTTTATTTAACATGCT+TGG - chr8.2:4015517-4015536 None:intergenic 20.0%
!!! TACTAAAATGAGTTTAGTTT+TGG + chr8.2:4018486-4018505 MS.gene62087:intron 20.0%
!!! TCTTATTGTTTTATTTTGCT+TGG + chr8.2:4016573-4016592 MS.gene62087:intron 20.0%
!!! TTAATGTTTGGTTCTAATTT+CGG - chr8.2:4018828-4018847 None:intergenic 20.0%
! AATATAAGATGAATGTTGCA+TGG + chr8.2:4017941-4017960 MS.gene62087:intron 25.0%
! ACTAACAAAAGATACATTTG+AGG + chr8.2:4017785-4017804 MS.gene62087:intron 25.0%
! ACTTGAAAACAAAAGAGAAA+GGG - chr8.2:4015016-4015035 None:intergenic 25.0%
! AGAAAACAACTATGTTCAAT+AGG + chr8.2:4015848-4015867 MS.gene62087:intron 25.0%
! AGAAATGAAGTTATAAGGAA+TGG + chr8.2:4015753-4015772 MS.gene62087:intron 25.0%
! AGATACTGTTAAAAACGTTT+AGG + chr8.2:4015229-4015248 MS.gene62087:intron 25.0%
! ATTGAACTTGAAATTGTTCA+GGG + chr8.2:4018972-4018991 MS.gene62087:intron 25.0%
! CGAGAAATTATGAAAATGAT+TGG + chr8.2:4016156-4016175 MS.gene62087:intron 25.0%
! GATACTGTTAAAAACGTTTA+GGG + chr8.2:4015230-4015249 MS.gene62087:intron 25.0%
! GTTTACAAATATTATGCTGA+TGG + chr8.2:4014903-4014922 MS.gene62087:CDS 25.0%
! TAACAACATAAGTTAATGGA+TGG - chr8.2:4015370-4015389 None:intergenic 25.0%
! TCAAATAAATCAATCCAAAC+AGG + chr8.2:4017057-4017076 MS.gene62087:intron 25.0%
! TTTATAAGTTTCACCTGAAA+GGG - chr8.2:4019104-4019123 None:intergenic 25.0%
!! AATCTCTGAATTTTACGAAT+TGG + chr8.2:4015303-4015322 MS.gene62087:intron 25.0%
!! ATATGAATAAACGGTCATTT+TGG - chr8.2:4017856-4017875 None:intergenic 25.0%
!! ATTAAGCTTTTTATCGAAAC+AGG - chr8.2:4016841-4016860 None:intergenic 25.0%
!! ATTTGCAAAAGCTCTAATTA+TGG + chr8.2:4019189-4019208 MS.gene62087:intron 25.0%
!! CAAATGTTTTATCATTCACA+GGG + chr8.2:4019313-4019332 MS.gene62087:intron 25.0%
!! CAATCCATTTTGTGTATATT+TGG + chr8.2:4019126-4019145 MS.gene62087:intron 25.0%
!! TCAAATGTTTTATCATTCAC+AGG + chr8.2:4019312-4019331 MS.gene62087:intron 25.0%
!! TTAAGCTTTTTATCGAAACA+GGG - chr8.2:4016840-4016859 None:intergenic 25.0%
!! TTTAGAACTGGAAAATCAAT+AGG + chr8.2:4016397-4016416 MS.gene62087:intron 25.0%
!! TTTTACTGTGTGTTTGATTA+TGG + chr8.2:4018604-4018623 MS.gene62087:intron 25.0%
!! TTTTATAAGTTTCACCTGAA+AGG - chr8.2:4019105-4019124 None:intergenic 25.0%
!!! AAAACTGATTTTGACATGTT+TGG - chr8.2:4018750-4018769 None:intergenic 25.0%
!!! TACTTCAATCATTTTAGAAC+TGG + chr8.2:4016385-4016404 MS.gene62087:intron 25.0%
!!! TATGAATAAACGGTCATTTT+GGG - chr8.2:4017855-4017874 None:intergenic 25.0%
AAAATCAGCACAAAAGTCAT+GGG + chr8.2:4015942-4015961 MS.gene62087:CDS 30.0%
AAACACACAGTAAAAACGTT+TGG - chr8.2:4018599-4018618 None:intergenic 30.0%
AACCTTATTAACTTCCTCTT+GGG - chr8.2:4015911-4015930 None:intergenic 30.0%
AAGTGGATAGTATGAGAATA+TGG - chr8.2:4016809-4016828 None:intergenic 30.0%
AATATTATGCTGATGGAGAA+TGG + chr8.2:4014910-4014929 MS.gene62087:CDS 30.0%
AATGATGATTAGTGATGCAA+TGG + chr8.2:4019025-4019044 MS.gene62087:CDS 30.0%
AATTGATTGTTGAAGTGAGA+GGG - chr8.2:4018433-4018452 None:intergenic 30.0%
ACAGAATTGATCCTAATTAC+AGG - chr8.2:4018351-4018370 None:intergenic 30.0%
ACTTTGTATGATTCTTCATG+TGG + chr8.2:4015051-4015070 MS.gene62087:intron 30.0%
AGAGGAAGTTAATAAGGTTA+TGG + chr8.2:4015912-4015931 MS.gene62087:CDS 30.0%
AGATTGACTGGATAGTTAAA+AGG - chr8.2:4016668-4016687 None:intergenic 30.0%
AGGATATAAATTACCTGAGT+TGG - chr8.2:4016749-4016768 None:intergenic 30.0%
ATAAGCTGACAACAACTTAT+TGG + chr8.2:4016973-4016992 MS.gene62087:intron 30.0%
ATATGTAGTGAAATAGACCT+TGG - chr8.2:4016330-4016349 None:intergenic 30.0%
ATTCCGTTACAAATGGAATT+GGG + chr8.2:4017476-4017495 MS.gene62087:CDS 30.0%
ATTGATGTGAGATCTACATA+GGG + chr8.2:4015585-4015604 MS.gene62087:intron 30.0%
CATTGAACTTGAAATTGTTC+AGG + chr8.2:4018971-4018990 MS.gene62087:intron 30.0%
CCATTAACTTATGTTGTTAG+AGG + chr8.2:4015371-4015390 MS.gene62087:intron 30.0%
CCTCTAACAACATAAGTTAA+TGG - chr8.2:4015374-4015393 None:intergenic 30.0%
CTAACATTATCCAATAGCAA+AGG - chr8.2:4018282-4018301 None:intergenic 30.0%
GACTTGAAAACAAAAGAGAA+AGG - chr8.2:4015017-4015036 None:intergenic 30.0%
GGTGTTAAAAATGATTTCAG+AGG - chr8.2:4018804-4018823 None:intergenic 30.0%
GTTGCTGCAAACATTATAAA+AGG + chr8.2:4017545-4017564 MS.gene62087:CDS 30.0%
TAACCTTATTAACTTCCTCT+TGG - chr8.2:4015912-4015931 None:intergenic 30.0%
TAATTGATTGTTGAAGTGAG+AGG - chr8.2:4018434-4018453 None:intergenic 30.0%
TATTGATGTGAGATCTACAT+AGG + chr8.2:4015584-4015603 MS.gene62087:intron 30.0%
TCATACTATCCACTTTCTTA+TGG + chr8.2:4016814-4016833 MS.gene62087:intron 30.0%
TCGTCAAAAACACTACATAT+GGG + chr8.2:4016781-4016800 MS.gene62087:intron 30.0%
TTACCTTGAACTTTGTATTG+AGG - chr8.2:4014990-4015009 None:intergenic 30.0%
TTCTTTACTGTTCCTTCTAA+TGG + chr8.2:4017167-4017186 MS.gene62087:intron 30.0%
! AATACATTCATGGATTGTAG+TGG - chr8.2:4017676-4017695 None:intergenic 30.0%
! ATATAAATTACCTGAGTTGG+AGG - chr8.2:4016746-4016765 None:intergenic 30.0%
! ATTTCCCTAATTGCTCTTTT+CGG + chr8.2:4015728-4015747 MS.gene62087:intron 30.0%
! CATTAGCTAGAACTTTTATG+AGG - chr8.2:4017088-4017107 None:intergenic 30.0%
! TAAAAGGAGGTTTTTCATAC+AGG + chr8.2:4017561-4017580 MS.gene62087:CDS 30.0%
! TAACGTGCAACAAAAGTTTT+TGG - chr8.2:4015450-4015469 None:intergenic 30.0%
! TGCTTTTGTTCATCCTTTTT+AGG - chr8.2:4015109-4015128 None:intergenic 30.0%
! TTTTTATGAAAAGTGGTCAG+AGG + chr8.2:4018025-4018044 MS.gene62087:intron 30.0%
!! ATTGATTTTCAGATCCCATT+AGG + chr8.2:4016623-4016642 MS.gene62087:intron 30.0%
!! CTTTGCTATTGGATAATGTT+AGG + chr8.2:4018280-4018299 MS.gene62087:CDS 30.0%
!! GAATAAGTTAAGTGTTGCTT+AGG + chr8.2:4016123-4016142 MS.gene62087:intron 30.0%
!! TTGCTGATTCAAAAAACTCA+AGG + chr8.2:4015670-4015689 MS.gene62087:intron 30.0%
AAGCCTCAATACAAAGTTCA+AGG + chr8.2:4014984-4015003 MS.gene62087:CDS 35.0%
AATTGCATACGAAAATTCCG+AGG - chr8.2:4015539-4015558 None:intergenic 35.0%
ACTGTTAAAAACGTTTAGGG+AGG + chr8.2:4015233-4015252 MS.gene62087:intron 35.0%
AGGATCAATTCTGTTGAAGA+AGG + chr8.2:4018357-4018376 MS.gene62087:CDS 35.0%
ATATTTGGTATTACGGTCGA+TGG + chr8.2:4019141-4019160 MS.gene62087:intron 35.0%
ATCCTAATTACAGGCAAAAC+TGG - chr8.2:4018342-4018361 None:intergenic 35.0%
ATTAGTGATGCAATGGAATC+AGG + chr8.2:4019032-4019051 MS.gene62087:CDS 35.0%
ATTGAGGCTTTCTTGTAGTA+GGG - chr8.2:4014974-4014993 None:intergenic 35.0%
ATTGCAATTTCAAAGAAGGC+AGG + chr8.2:4017449-4017468 MS.gene62087:CDS 35.0%
CAAAATCAGCACAAAAGTCA+TGG + chr8.2:4015941-4015960 MS.gene62087:CDS 35.0%
CAAAGTTGCTAGCATTACAA+TGG - chr8.2:4018389-4018408 None:intergenic 35.0%
CATTGTAATGCTAGCAACTT+TGG + chr8.2:4018387-4018406 MS.gene62087:CDS 35.0%
CTCGTCAAAAACACTACATA+TGG + chr8.2:4016780-4016799 MS.gene62087:intron 35.0%
CTGATGATTCTGATACAACT+GGG - chr8.2:4018170-4018189 None:intergenic 35.0%
GATGTGATCATGTGAGAATA+TGG + chr8.2:4015073-4015092 MS.gene62087:intron 35.0%
GATTCCGTTACAAATGGAAT+TGG + chr8.2:4017475-4017494 MS.gene62087:CDS 35.0%
GCTGCAAACATTATAAAAGG+AGG + chr8.2:4017548-4017567 MS.gene62087:CDS 35.0%
GGTATAAAAGACAGTGGAAT+TGG + chr8.2:4019334-4019353 MS.gene62087:CDS 35.0%
GTCGTATAAACTGTAAGCAT+CGG - chr8.2:4015706-4015725 None:intergenic 35.0%
GTGAATGATGCTAAACAGAA+AGG + chr8.2:4018210-4018229 MS.gene62087:CDS 35.0%
TAGTTTGGTTGAGAAAGTGA+AGG + chr8.2:4018092-4018111 MS.gene62087:CDS 35.0%
TATTGAGGCTTTCTTGTAGT+AGG - chr8.2:4014975-4014994 None:intergenic 35.0%
TATTTGGTCCTTTCATTTCC+CGG - chr8.2:4016296-4016315 None:intergenic 35.0%
TCAATGAAGGTTGTAAGATC+TGG + chr8.2:4016194-4016213 MS.gene62087:intron 35.0%
TCATCAGCCAATTTCATTGA+AGG + chr8.2:4018183-4018202 MS.gene62087:CDS 35.0%
TGATGATTCTGATACAACTG+GGG - chr8.2:4018169-4018188 None:intergenic 35.0%
TGTATCTTTCGTTAGTCGTT+TGG - chr8.2:4017749-4017768 None:intergenic 35.0%
TGTCATCATGTTTATGCTGT+TGG - chr8.2:4019374-4019393 None:intergenic 35.0%
TGTTAAGGTTGTCTTGGTAA+TGG + chr8.2:4018056-4018075 MS.gene62087:CDS 35.0%
TGTTGTTAGAGGCTATAACT+TGG + chr8.2:4015382-4015401 MS.gene62087:intron 35.0%
TTGACTGGATAGTTAAAAGG+CGG - chr8.2:4016665-4016684 None:intergenic 35.0%
TTGATGTGAGATCTACATAG+GGG + chr8.2:4015586-4015605 MS.gene62087:intron 35.0%
TTTGACGAGTATCACAATGA+AGG - chr8.2:4016769-4016788 None:intergenic 35.0%
! AACATCTCCGTCTAAAATCT+CGG - chr8.2:4014886-4014905 None:intergenic 35.0%
! AGCTAGAACTTTTATGAGGT+AGG - chr8.2:4017084-4017103 None:intergenic 35.0%
! ATAGTTTTCCGGGAAATGAA+AGG + chr8.2:4016285-4016304 MS.gene62087:CDS 35.0%
! ATGCATGTATCTCAGGATTT+TGG - chr8.2:4016460-4016479 None:intergenic 35.0%
! CAAGAAGCGTATGATGTAAT+TGG - chr8.2:4017908-4017927 None:intergenic 35.0%
! CTTGGTTTCAGATAGTTTTC+CGG + chr8.2:4016274-4016293 MS.gene62087:CDS 35.0%
! GCTAGAACTTTTATGAGGTA+GGG - chr8.2:4017083-4017102 None:intergenic 35.0%
! TTGGTTTCAGATAGTTTTCC+GGG + chr8.2:4016275-4016294 MS.gene62087:CDS 35.0%
!! ATGTTTGGTTCTAATTTCGG+AGG - chr8.2:4018825-4018844 None:intergenic 35.0%
!! CAAAGTAGAAACTCTAGAGT+TGG - chr8.2:4015490-4015509 None:intergenic 35.0%
!! CTTCTTTGAAATTGCAATGC+CGG - chr8.2:4017447-4017466 None:intergenic 35.0%
!! GCTTTGCTATTTCTTTGACT+AGG - chr8.2:4016053-4016072 None:intergenic 35.0%
!! GTCAGTTTTCTTAGAGTGTT+TGG - chr8.2:4017812-4017831 None:intergenic 35.0%
!!! ACAAAAGTTTTTGGTCACGT+AGG - chr8.2:4015441-4015460 None:intergenic 35.0%
!!! ATTTTGCTTGGTTGATGATG+TGG + chr8.2:4016585-4016604 MS.gene62087:intron 35.0%
AACACAGCTGATTAGACCTT+TGG - chr8.2:4017266-4017285 None:intergenic 40.0%
AAGGTGGCAAAACTAAGTGT+TGG + chr8.2:4018117-4018136 MS.gene62087:CDS 40.0%
AATTAGCACTTCTGGTGCAA+AGG + chr8.2:4017599-4017618 MS.gene62087:intron 40.0%
ACACAGCTGATTAGACCTTT+GGG - chr8.2:4017265-4017284 None:intergenic 40.0%
ACCTGAAAGGGAAAATGATC+TGG - chr8.2:4019092-4019111 None:intergenic 40.0%
AGAGAGAAGGGAATCTCATT+TGG + chr8.2:4018256-4018275 MS.gene62087:CDS 40.0%
AGCAAAAGATGCAGTTACAG+AGG + chr8.2:4016074-4016093 MS.gene62087:CDS 40.0%
AGCCAATTTCATTGAAGGCT+TGG + chr8.2:4018188-4018207 MS.gene62087:CDS 40.0%
AGGCATGATTCCGTTACAAA+TGG + chr8.2:4017469-4017488 MS.gene62087:CDS 40.0%
AGTTGCTAGCATTACAATGG+TGG - chr8.2:4018386-4018405 None:intergenic 40.0%
ATCCAGGAGTGAACTGTATA+AGG + chr8.2:4017326-4017345 MS.gene62087:CDS 40.0%
ATGGCTAAGATCACTCCTAA+TGG - chr8.2:4016641-4016660 None:intergenic 40.0%
CAAATATTGCCTCACTTCCA+AGG + chr8.2:4016310-4016329 MS.gene62087:CDS 40.0%
CAAGTGTTTGTGAGAGCTAA+TGG - chr8.2:4017016-4017035 None:intergenic 40.0%
CACCAAGCCTTCAATGAAAT+TGG - chr8.2:4018193-4018212 None:intergenic 40.0%
CATGGTTCATTGCTTTCACT+TGG + chr8.2:4017231-4017250 MS.gene62087:CDS 40.0%
CATGTCTCAATTAGCACTTC+TGG + chr8.2:4017591-4017610 MS.gene62087:intron 40.0%
CCTCCCAATTCCATTTGTAA+CGG - chr8.2:4017482-4017501 None:intergenic 40.0%
CCTGAGATACATGCATTCAA+GGG + chr8.2:4016464-4016483 MS.gene62087:intron 40.0%
CGGCATTGCAATTTCAAAGA+AGG + chr8.2:4017445-4017464 MS.gene62087:CDS 40.0%
CGGCGAGAAATGAAGTTATA+AGG + chr8.2:4015748-4015767 MS.gene62087:intron 40.0%
CTCCCAAGAGGAAGTTAATA+AGG + chr8.2:4015906-4015925 MS.gene62087:CDS 40.0%
CTTGGAAGTGAGGCAATATT+TGG - chr8.2:4016312-4016331 None:intergenic 40.0%
GAAGAAGGAGTAAGGATTCT+TGG + chr8.2:4016239-4016258 MS.gene62087:CDS 40.0%
GAATGGAAGAAATCTACCTC+TGG + chr8.2:4014927-4014946 MS.gene62087:CDS 40.0%
GCCAAGAATACAAGAGAGAA+GGG + chr8.2:4018244-4018263 MS.gene62087:CDS 40.0%
GCTGATGATTCTGATACAAC+TGG - chr8.2:4018171-4018190 None:intergenic 40.0%
GGAATCAGTTGCTGATAGTT+TGG + chr8.2:4018077-4018096 MS.gene62087:CDS 40.0%
GGTTGTAAGATCTGGTGATT+TGG + chr8.2:4016202-4016221 MS.gene62087:intron 40.0%
GTTTCTTACTGTGCTGAAGA+AGG + chr8.2:4016224-4016243 MS.gene62087:CDS 40.0%
TACTGCTGTTAAGGTTGTCT+TGG + chr8.2:4018050-4018069 MS.gene62087:CDS 40.0%
TCACAGGGTATAAAAGACAG+TGG + chr8.2:4019328-4019347 MS.gene62087:intron 40.0%
TCCCTTCTCTCTTGTATTCT+TGG - chr8.2:4018248-4018267 None:intergenic 40.0%
TCCTGAGATACATGCATTCA+AGG + chr8.2:4016463-4016482 MS.gene62087:intron 40.0%
TGAAATAGACCTTGGAAGTG+AGG - chr8.2:4016322-4016341 None:intergenic 40.0%
TGAAGATGCTGACCTTGATT+TGG + chr8.2:4017523-4017542 MS.gene62087:CDS 40.0%
TGATGTGAGATCTACATAGG+GGG + chr8.2:4015587-4015606 MS.gene62087:intron 40.0%
TGCATGGAGATCATTGTTAG+AGG - chr8.2:4015881-4015900 None:intergenic 40.0%
TGCCAAGAATACAAGAGAGA+AGG + chr8.2:4018243-4018262 MS.gene62087:CDS 40.0%
TGGATAGTTAAAAGGCGGAA+TGG - chr8.2:4016660-4016679 None:intergenic 40.0%
TGGCTAAGATCACTCCTAAT+GGG - chr8.2:4016640-4016659 None:intergenic 40.0%
TGTTTGCAGCAACCAAATCA+AGG - chr8.2:4017538-4017557 None:intergenic 40.0%
! GACCAGTTTTGCCTGTAATT+AGG + chr8.2:4018337-4018356 MS.gene62087:CDS 40.0%
! TCTCATTTGGCCTTTGCTAT+TGG + chr8.2:4018269-4018288 MS.gene62087:CDS 40.0%
! TCTGTAACTGCATCTTTTGC+TGG - chr8.2:4016075-4016094 None:intergenic 40.0%
! TTGCAGCTTTGTGTTCTTTG+AGG - chr8.2:4016020-4016039 None:intergenic 40.0%
! TTTGAGACAGCAAGATTGAC+TGG - chr8.2:4016680-4016699 None:intergenic 40.0%
!! TGGACTTGCTACACCTAAAA+AGG + chr8.2:4015093-4015112 MS.gene62087:intron 40.0%
!!! GATAGCAACACTTTTTCCAG+AGG - chr8.2:4014946-4014965 None:intergenic 40.0%
ACAGGCAAAACTGGTCCAAA+TGG - chr8.2:4018333-4018352 None:intergenic 45.0%
ACTGTGCTGAAGAAGGAGTA+AGG + chr8.2:4016231-4016250 MS.gene62087:CDS 45.0%
AGACAGTGGAATTGGATCAC+AGG + chr8.2:4019342-4019361 MS.gene62087:CDS 45.0%
AGACATGAGAATTGCATGGG+AGG + chr8.2:4018305-4018324 MS.gene62087:CDS 45.0%
AGCATCGTACAGCCATTAGA+AGG - chr8.2:4017182-4017201 None:intergenic 45.0%
AGGAGTAAGGATTCTTGGAG+AGG + chr8.2:4016244-4016263 MS.gene62087:CDS 45.0%
AGGGCTTGGCAAGTTTATCA+CGG - chr8.2:4019410-4019429 None:intergenic 45.0%
AGTGAAGCTATCGGATAGCA+AGG - chr8.2:4017414-4017433 None:intergenic 45.0%
ATATCACAGTCATCCTCAGG+TGG - chr8.2:4018144-4018163 None:intergenic 45.0%
ATCTCCACCAGTGAAGCTAT+CGG - chr8.2:4017423-4017442 None:intergenic 45.0%
CACCTTATACAGTTCACTCC+TGG - chr8.2:4017331-4017350 None:intergenic 45.0%
CCAAGCCCTTCTTATACCAT+GGG + chr8.2:4019421-4019440 MS.gene62087:CDS 45.0%
CCCTTGAATGCATGTATCTC+AGG - chr8.2:4016467-4016486 None:intergenic 45.0%
CCGTTACAAATGGAATTGGG+AGG + chr8.2:4017479-4017498 MS.gene62087:CDS 45.0%
CTCGCCGAAAAGAGCAATTA+GGG - chr8.2:4015735-4015754 None:intergenic 45.0%
CTGTACGATGCTGCATTTCA+GGG + chr8.2:4017190-4017209 MS.gene62087:intron 45.0%
GAAACAGGGCCATAAGAAAG+TGG - chr8.2:4016826-4016845 None:intergenic 45.0%
GAATTTCCAGCAATGAGTGC+AGG - chr8.2:4016710-4016729 None:intergenic 45.0%
GACAGTGGAATTGGATCACA+GGG + chr8.2:4019343-4019362 MS.gene62087:CDS 45.0%
GACTTCCTTACAATGCATCC+AGG + chr8.2:4017310-4017329 MS.gene62087:CDS 45.0%
GCAAGGTTACAAGTCAGGAT+AGG - chr8.2:4017397-4017416 None:intergenic 45.0%
GCCAGACATGAGAATTGCAT+GGG + chr8.2:4018302-4018321 MS.gene62087:CDS 45.0%
GCGTATGATGTAATTGGCTG+AGG - chr8.2:4017902-4017921 None:intergenic 45.0%
GGAGGAGTGAATTTGCAGAT+TGG + chr8.2:4015251-4015270 MS.gene62087:intron 45.0%
GGAGTAAGGATTCTTGGAGA+GGG + chr8.2:4016245-4016264 MS.gene62087:CDS 45.0%
GGATAGCAAGGTTACAAGTC+AGG - chr8.2:4017402-4017421 None:intergenic 45.0%
GGTCTAATCAGCTGTGTTAC+TGG + chr8.2:4017268-4017287 MS.gene62087:CDS 45.0%
GGTTGAGAAAGTGAAGGCTA+AGG + chr8.2:4018098-4018117 MS.gene62087:CDS 45.0%
GTCACGTAGGATTCACTTGT+AGG - chr8.2:4015428-4015447 None:intergenic 45.0%
GTGATATCACAGTCATCCTC+AGG - chr8.2:4018147-4018166 None:intergenic 45.0%
GTTCATTGCTTTCACTTGGC+TGG + chr8.2:4017235-4017254 MS.gene62087:CDS 45.0%
TCACTCCTGGATGCATTGTA+AGG - chr8.2:4017318-4017337 None:intergenic 45.0%
TCAGGGATGTGTGTTCACAA+AGG + chr8.2:4018989-4019008 MS.gene62087:intron 45.0%
TCCCATGCAATTCTCATGTC+TGG - chr8.2:4018306-4018325 None:intergenic 45.0%
TCTCGCCGAAAAGAGCAATT+AGG - chr8.2:4015736-4015755 None:intergenic 45.0%
TCTTGGAGAGGGAAAGTTCT+TGG + chr8.2:4016256-4016275 MS.gene62087:CDS 45.0%
TGAGAAAGTGAAGGCTAAGG+TGG + chr8.2:4018101-4018120 MS.gene62087:CDS 45.0%
TGCTAGCAACTTTGGACTTC+AGG + chr8.2:4018395-4018414 MS.gene62087:CDS 45.0%
TTGCTATCCGATAGCTTCAC+TGG + chr8.2:4017413-4017432 MS.gene62087:intron 45.0%
TTTATGAGGTAGGGCCTGTT+TGG - chr8.2:4017074-4017093 None:intergenic 45.0%
! AAAGACCCCACTTTGGAAGA+GGG + chr8.2:4015966-4015985 MS.gene62087:CDS 45.0%
! ATCAGCTGTGTTACTGGCAA+AGG + chr8.2:4017274-4017293 MS.gene62087:CDS 45.0%
! GCCAGATCATTTTCCCTTTC+AGG + chr8.2:4019088-4019107 MS.gene62087:CDS 45.0%
! GTGCTTGCCGAGATTTTAGA+CGG + chr8.2:4014876-4014895 MS.gene62087:CDS 45.0%
! TCAGAGGTGTACTGCTGTTA+AGG + chr8.2:4018041-4018060 MS.gene62087:CDS 45.0%
! TTCATGGATTGTAGTGGCAC+CGG - chr8.2:4017670-4017689 None:intergenic 45.0%
AGCACTTCTGGTGCAAAGGA+AGG + chr8.2:4017603-4017622 MS.gene62087:intron 50.0%
AGCTGTTGCAGCTCTTCACA+TGG + chr8.2:4017213-4017232 MS.gene62087:CDS 50.0%
AGCTTCACTGGTGGAGATAC+CGG + chr8.2:4017425-4017444 MS.gene62087:intron 50.0%
AGTTCAGCCCTCTTCCAAAG+TGG - chr8.2:4015976-4015995 None:intergenic 50.0%
ATAAATTCTGCCCCAGCTCG+TGG + chr8.2:4019065-4019084 MS.gene62087:CDS 50.0%
ATTGCATGGGAGGAGCCATT+TGG + chr8.2:4018315-4018334 MS.gene62087:CDS 50.0%
ATTGCTCCTGCACTCATTGC+TGG + chr8.2:4016701-4016720 MS.gene62087:CDS 50.0%
CACTTCTGGTGCAAAGGAAG+GGG + chr8.2:4017605-4017624 MS.gene62087:intron 50.0%
CCCATGGTATAAGAAGGGCT+TGG - chr8.2:4019424-4019443 None:intergenic 50.0%
CTATCCGATAGCTTCACTGG+TGG + chr8.2:4017416-4017435 MS.gene62087:intron 50.0%
GAGGGCTGAACTTCTTCACA+AGG + chr8.2:4015984-4016003 MS.gene62087:CDS 50.0%
GCACTTCTGGTGCAAAGGAA+GGG + chr8.2:4017604-4017623 MS.gene62087:intron 50.0%
GCCAAGCCCTTCTTATACCA+TGG + chr8.2:4019420-4019439 MS.gene62087:CDS 50.0%
GCTGTACGATGCTGCATTTC+AGG + chr8.2:4017189-4017208 MS.gene62087:intron 50.0%
GGCCAGACATGAGAATTGCA+TGG + chr8.2:4018301-4018320 MS.gene62087:CDS 50.0%
GTTCAGCCCTCTTCCAAAGT+GGG - chr8.2:4015975-4015994 None:intergenic 50.0%
TAAATTCTGCCCCAGCTCGT+GGG + chr8.2:4019066-4019085 MS.gene62087:CDS 50.0%
TTCAGCCCTCTTCCAAAGTG+GGG - chr8.2:4015974-4015993 None:intergenic 50.0%
! CAAAGACCCCACTTTGGAAG+AGG + chr8.2:4015965-4015984 MS.gene62087:CDS 50.0%
! CTGTGTTACTGGCAAAGGCT+CGG + chr8.2:4017279-4017298 MS.gene62087:CDS 50.0%
!! ACTAAGTGTTGGACCACCTG+AGG + chr8.2:4018128-4018147 MS.gene62087:CDS 50.0%
!!! CACTTGGCTGGTTTTCCCAA+AGG + chr8.2:4017247-4017266 MS.gene62087:CDS 50.0%
AAATGATCTGGCCCACGAGC+TGG - chr8.2:4019080-4019099 None:intergenic 55.0%
AATGATCTGGCCCACGAGCT+GGG - chr8.2:4019079-4019098 None:intergenic 55.0%
ACGGTCGATGGCCAGAATCA+CGG + chr8.2:4019153-4019172 MS.gene62087:intron 55.0%
ACTGGCAAAGGCTCGGAGAT+TGG + chr8.2:4017286-4017305 MS.gene62087:CDS 55.0%
CATGGGCAAAGACCCCACTT+TGG + chr8.2:4015959-4015978 MS.gene62087:CDS 55.0%
TGTGCTCAAGCCTCCAACTC+AGG + chr8.2:4016733-4016752 MS.gene62087:CDS 55.0%
ACGCTAGCTCGCCGTGATTC+TGG - chr8.2:4019167-4019186 None:intergenic 60.0%
ATGATCTGGCCCACGAGCTG+GGG - chr8.2:4019078-4019097 None:intergenic 60.0%
CCTCTTGGGAGCAAGCTGCA+TGG - chr8.2:4015897-4015916 None:intergenic 60.0%
CTGGTGCAAAGGAAGGGGCA+GGG + chr8.2:4017610-4017629 MS.gene62087:intron 60.0%
TCTGGTGCAAAGGAAGGGGC+AGG + chr8.2:4017609-4017628 MS.gene62087:intron 60.0%
! CCATGCAGCTTGCTCCCAAG+AGG + chr8.2:4015894-4015913 MS.gene62087:intron 60.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 4014861 4019447 4014861 ID=MS.gene62087
chr8.2 mRNA 4014861 4019447 4014861 ID=MS.gene62087.t1;Parent=MS.gene62087
chr8.2 exon 4014861 4015005 4014861 ID=MS.gene62087.t1.exon1;Parent=MS.gene62087.t1
chr8.2 CDS 4014861 4015005 4014861 ID=cds.MS.gene62087.t1;Parent=MS.gene62087.t1
chr8.2 exon 4015902 4016095 4015902 ID=MS.gene62087.t1.exon2;Parent=MS.gene62087.t1
chr8.2 CDS 4015902 4016095 4015902 ID=cds.MS.gene62087.t1;Parent=MS.gene62087.t1
chr8.2 exon 4016203 4016331 4016203 ID=MS.gene62087.t1.exon3;Parent=MS.gene62087.t1
chr8.2 CDS 4016203 4016331 4016203 ID=cds.MS.gene62087.t1;Parent=MS.gene62087.t1
chr8.2 exon 4016635 4016754 4016635 ID=MS.gene62087.t1.exon4;Parent=MS.gene62087.t1
chr8.2 CDS 4016635 4016754 4016635 ID=cds.MS.gene62087.t1;Parent=MS.gene62087.t1
chr8.2 exon 4017211 4017347 4017211 ID=MS.gene62087.t1.exon5;Parent=MS.gene62087.t1
chr8.2 CDS 4017211 4017347 4017211 ID=cds.MS.gene62087.t1;Parent=MS.gene62087.t1
chr8.2 exon 4017427 4017582 4017427 ID=MS.gene62087.t1.exon6;Parent=MS.gene62087.t1
chr8.2 CDS 4017427 4017582 4017427 ID=cds.MS.gene62087.t1;Parent=MS.gene62087.t1
chr8.2 exon 4018038 4018416 4018038 ID=MS.gene62087.t1.exon7;Parent=MS.gene62087.t1
chr8.2 CDS 4018038 4018416 4018038 ID=cds.MS.gene62087.t1;Parent=MS.gene62087.t1
chr8.2 exon 4018993 4019109 4018993 ID=MS.gene62087.t1.exon8;Parent=MS.gene62087.t1
chr8.2 CDS 4018993 4019109 4018993 ID=cds.MS.gene62087.t1;Parent=MS.gene62087.t1
chr8.2 exon 4019334 4019447 4019334 ID=MS.gene62087.t1.exon9;Parent=MS.gene62087.t1
chr8.2 CDS 4019334 4019447 4019334 ID=cds.MS.gene62087.t1;Parent=MS.gene62087.t1
Gene Sequence

>MS.gene62087

ATGGCTGCTACTGGAGTGCTTGCCGAGATTTTAGACGGAGATGTTTACAAATATTATGCTGATGGAGAATGGAAGAAATCTACCTCTGGAAAAAGTGTTGCTATCATCAACCCTACTACAAGAAAGCCTCAATACAAAGTTCAAGGTAATTTCCCTTTCTCTTTTGTTTTCAAGTCCTTTTATTTTAGTTACTTTGTATGATTCTTCATGTGGATGTGATCATGTGAGAATATGGACTTGCTACACCTAAAAAGGATGAACAAAAGCAACTATGTATGTTTACTGAATGCAAGACTTCAAAATTTTATAACAAGGATATATTCTGAAATTTCAACTTTTAATTTCACTGCTAGTAATTGTGAAAACACAGATACTGTTAAAAACGTTTAGGGAGGAGTGAATTTGCAGATTGGTCTTAGAAATTGTGAACAACGATCAAAATAATCTCTGAATTTTACGAATTGGCAAATACATCTCTGAAATAGTAACACATCAGTCAAAATGATCCATCCATTAACTTATGTTGTTAGAGGCTATAACTTGGTATGCTAAATGAACATGTAGCCTACAAGTGAATCCTACGTGACCAAAAACTTTTGTTGCACGTTAAATTCATGTATTTAATGCCAACTCTAGAGTTTCTACTTTGAGATCCAAGCATGTTAAATAAAATTACCTCGGAATTTTCGTATGCAATTTAGTTGTAGTCTGTAGATAATGTATTATTGATGTGAGATCTACATAGGGGGCTATATATTCAATTAACAAATGAACCGTTTTGATGATTCTTTACAATTTTGAAGATAGATTTGCTGATTCAAAAAACTCAAGGACTATTTCGACCGATGCTTACAGTTTATACGACTAATTTCCCTAATTGCTCTTTTCGGCGAGAAATGAAGTTATAAGGAATGGAGATGACATTTGAACACTATGTCATTCTTTTAATAACAGTAAAAAGAAAATAGACTGATAGATAAATATAACAGAAAACAACTATGTTCAATAGGTTCTAAGCCTCTAACAATGATCTCCATGCAGCTTGCTCCCAAGAGGAAGTTAATAAGGTTATGGATTCAGCAAAATCAGCACAAAAGTCATGGGCAAAGACCCCACTTTGGAAGAGGGCTGAACTTCTTCACAAGGCAGCTGCAATCCTCAAAGAACACAAAGCTGCAATTGCAGAATGCCTAGTCAAAGAAATAGCAAAGCCAGCAAAAGATGCAGTTACAGAGGTGCATATTGTGTTACAGTGTTATGTTGAATAAGTTAAGTGTTGCTTAGGACTATAATATCGAGAAATTATGAAAATGATTGGAATTTTTAAATTTTTTCAATGAAGGTTGTAAGATCTGGTGATTTGGTTTCTTACTGTGCTGAAGAAGGAGTAAGGATTCTTGGAGAGGGAAAGTTCTTGGTTTCAGATAGTTTTCCGGGAAATGAAAGGACCAAATATTGCCTCACTTCCAAGGTCTATTTCACTACATATGCTACTTCTTAATATTCAATTCATATGTTACTATATACTTCAATCATTTTAGAACTGGAAAATCAATAGGACAATGTACTTTATAAAGTCAATAAATTGGCGCGACACCAAAATCCTGAGATACATGCATTCAAGGGTGTAATATATCTGCATTGCATTCAATTATCTTAGTAACTTTTAATGACTTGTAAATTAAATGATCATGGTGAACTGTCATGTGTAATCTTATTGTTTTATTTTGCTTGGTTGATGATGTGGTCTAAGAAAGTTGCAATTGATTTTCAGATCCCATTAGGAGTGATCTTAGCCATTCCGCCTTTTAACTATCCAGTCAATCTTGCTGTCTCAAAAATTGCTCCTGCACTCATTGCTGGAAATTCTATTGTGCTCAAGCCTCCAACTCAGGTAATTTATATCCTTCATTGTGATACTCGTCAAAAACACTACATATGGGATCCATATTCTCATACTATCCACTTTCTTATGGCCCTGTTTCGATAAAAAGCTTAATTAAGAACTTATAGATTAAGCGCTTAACATATAAGTGTTTATGCATAAGTCATTTCTATAACAAATAAAATAAACTCAAACTATTTTCATATAGGCCATAAACTGTTTTCTTAATAAGCTGACAACAACTTATTGGCATGTCATAAGCGATTTCCATTAGCTCTCACAAACACTTGTGATTATAATTGTAAATAAGCTCAAATAAATCAATCCAAACAGGCCCTACCTCATAAAAGTTCTAGCTAATGTCTGAGCCGTTAAAAGAAACCAAAATAAAAAGTTTATGTCAGAATTTTTAAGTCTTATTTTCTTTACTGTTCCTTCTAATGGCTGTACGATGCTGCATTTCAGGGAGCTGTTGCAGCTCTTCACATGGTTCATTGCTTTCACTTGGCTGGTTTTCCCAAAGGTCTAATCAGCTGTGTTACTGGCAAAGGCTCGGAGATTGGTGACTTCCTTACAATGCATCCAGGAGTGAACTGTATAAGGTGATTATATATCTATATGATGCTGTGATAGTATATGCTACTTTTACCTATCCTGACTTGTAACCTTGCTATCCGATAGCTTCACTGGTGGAGATACCGGCATTGCAATTTCAAAGAAGGCAGGCATGATTCCGTTACAAATGGAATTGGGAGGAAAAGATGCTTGCATTGTACTTGAAGATGCTGACCTTGATTTGGTTGCTGCAAACATTATAAAAGGAGGTTTTTCATACAGGTGAATAACATGTCTCAATTAGCACTTCTGGTGCAAAGGAAGGGGCAGGGTTTGTCTTTCCATGCATTTACTTCATAAATATAACCGGTGCCACTACAATCCATGAATGTATTTAAATTGCAAACGCATCTCTATGTTTATCTTTTATTAGTAATTTTATAGACCAAACGACTAACGAAAGATACATTTGATGATCAAAATAACTAACAAAAGATACATTTGAGGACCAAACACTCTAAGAAAACTGACATCGCTTAACACATTCAAAGCCCAAAATGACCGTTTATTCATATAACTGCTAATACTAAGCTAGACACCTCAGCCAATTACATCATACGCTTCTTGATATGCATTATACAATATAAGATGAATGTTGCATGGTTAAAATTCTCATCTAGAAATTAAATGCATAGTCTCTTGATACTGAACTTTTTTTTTAATTTTTTTATGAAAAGTGGTCAGAGGTGTACTGCTGTTAAGGTTGTCTTGGTAATGGAATCAGTTGCTGATAGTTTGGTTGAGAAAGTGAAGGCTAAGGTGGCAAAACTAAGTGTTGGACCACCTGAGGATGACTGTGATATCACCCCAGTTGTATCAGAATCATCAGCCAATTTCATTGAAGGCTTGGTGAATGATGCTAAACAGAAAGGAGCAACATTCTGCCAAGAATACAAGAGAGAAGGGAATCTCATTTGGCCTTTGCTATTGGATAATGTTAGGCCAGACATGAGAATTGCATGGGAGGAGCCATTTGGACCAGTTTTGCCTGTAATTAGGATCAATTCTGTTGAAGAAGGTATCCACCATTGTAATGCTAGCAACTTTGGACTTCAGGTAAAATCTTCAACCCTCTCACTTCAACAATCAATTACTCTTAGAAAGAAATAGTATAATGCCTTCTAATACTAAAATGAGTTTAGTTTTGGTACATATTGAGTGTAATTTTTTTTATACTAGCAACAATAGAGCACAAACGATCGTATGTGTGACTTTAGAACAAATTTTGCTTTAAGCCAAACGTTTTTACTGTGTGTTTGATTATGGAGTGACAAAAATTGATTTTGATTAACACCAAGTTAAAAATAAAGTGTTTTATGTTTAAATATATATCTTAGCTTCAACTTAGAATCGACTTTAGAGACAATCAATTCTACTGAAAAACATCCAAACATGTCAAAATCAGTTTTACACCTCTGAAATCATTTTTTTTTTAGGGAACCTCTGAAATCATTTTTAACACCTCCGAAATTAGAACCAAACATTAATTTAATGATATGACGATTAAGATTGACTGTGTAAAAAATCTTTGCATTTACCGTGCATGAATTAAATTCTAATAATTTATACTTGTGATGTGTTAGCATGCTAATAATAATTTGTATGAACAACATTGAACTTGAAATTGTTCAGGGATGTGTGTTCACAAAGGATATCAACAAAGCAATGATGATTAGTGATGCAATGGAATCAGGAACAGTTCAGATAAATTCTGCCCCAGCTCGTGGGCCAGATCATTTTCCCTTTCAGGTGAAACTTATAAAATCAATCCATTTTGTGTATATTTGGTATTACGGTCGATGGCCAGAATCACGGCGAGCTAGCGTGTATTTGCAAAAGCTCTAATTATGGCAAAATCACTGTAACATCAAATATGCACATGTTATTTATTTGATACAATTTCCAAAATTACAAAAACAACAAAAAAAAATTATATATATGTCTCATACTATCAAATGTTTTATCATTCACAGGGTATAAAAGACAGTGGAATTGGATCACAGGGAATTACCAACAGCATAAACATGATGACAAAAATCAAAACTACCGTGATAAACTTGCCAAGCCCTTCTTATACCATGGGCTAA

Protein sequence

>MS.gene62087.t1

MAATGVLAEILDGDVYKYYADGEWKKSTSGKSVAIINPTTRKPQYKVQACSQEEVNKVMDSAKSAQKSWAKTPLWKRAELLHKAAAILKEHKAAIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVILAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGGDTGIAISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLVEKVKAKVAKLSVGPPEDDCDITPVVSESSANFIEGLVNDAKQKGATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTKDINKAMMISDAMESGTVQINSAPARGPDHFPFQGIKDSGIGSQGITNSINMMTKIKTTVINLPSPSYTMG