AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene012582

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene012582.t1 MTR_4g131180 98.992 496 5 0 1 496 1 496 0.0 1013
MS.gene012582.t1 MTR_1g014320 89.919 496 50 0 1 496 1 496 0.0 940
MS.gene012582.t1 MTR_4g131180 98.911 459 5 0 1 459 1 459 0.0 938
MS.gene012582.t1 MTR_2g067660 31.130 469 306 7 22 482 53 512 5.31e-71 235
MS.gene012582.t1 MTR_3g078490 34.607 471 281 10 17 469 39 500 1.51e-61 210
MS.gene012582.t1 MTR_3g078550 33.686 472 284 11 17 469 9 470 4.03e-60 206
MS.gene012582.t1 MTR_8g064170 31.148 488 308 10 21 493 66 540 4.32e-60 206
MS.gene012582.t1 MTR_4g106510 31.838 468 298 9 17 469 9 470 1.72e-55 193
MS.gene012582.t1 MTR_8g083530 27.835 485 320 8 17 485 24 494 9.26e-55 191
MS.gene012582.t1 MTR_3g078550 33.937 442 263 11 47 469 9 440 4.90e-54 189
MS.gene012582.t1 MTR_4g107040 28.571 497 317 10 17 493 65 543 1.20e-52 186
MS.gene012582.t1 MTR_3g078170 29.508 488 316 11 21 493 67 541 1.60e-52 186
MS.gene012582.t1 MTR_6g086340 29.363 487 321 10 17 489 21 498 4.55e-52 184
MS.gene012582.t1 MTR_6g086300 28.689 488 312 10 17 485 23 493 1.84e-51 182
MS.gene012582.t1 MTR_6g086300 28.689 488 312 10 17 485 23 493 1.84e-51 182
MS.gene012582.t1 MTR_2g034160 29.106 481 303 13 29 485 62 528 5.09e-47 172
MS.gene012582.t1 MTR_2g009750 29.193 483 311 12 22 487 20 488 6.83e-46 167
MS.gene012582.t1 MTR_2g009750 29.193 483 311 12 22 487 21 489 6.88e-46 167
MS.gene012582.t1 MTR_2g009750 29.132 484 311 12 22 487 21 490 9.97e-46 167
MS.gene012582.t1 MTR_8g083520 27.044 477 301 9 17 485 15 452 4.11e-45 164
MS.gene012582.t1 MTR_8g064170 28.484 488 289 11 21 493 66 508 1.53e-44 164
MS.gene012582.t1 MTR_4g093170 27.883 477 318 10 22 483 48 513 6.28e-44 162
MS.gene012582.t1 MTR_3g078490 35.103 339 201 8 17 343 9 340 4.08e-40 149
MS.gene012582.t1 MTR_3g078170 29.648 398 261 9 21 407 67 456 1.54e-39 149
MS.gene012582.t1 MTR_8g083520 29.446 343 206 5 148 485 61 372 4.17e-38 143
MS.gene012582.t1 MTR_1399s0020 28.824 340 188 6 160 493 55 346 2.05e-34 132
MS.gene012582.t1 MTR_3g078170 30.599 317 205 6 21 330 67 375 1.84e-32 129
MS.gene012582.t1 MTR_3g078170 30.599 317 205 6 21 330 67 375 2.16e-32 129
MS.gene012582.t1 MTR_1222s0010 31.129 363 223 13 56 407 6 352 7.58e-31 127
MS.gene012582.t1 MTR_2g042330 24.280 486 342 14 19 490 25 498 9.41e-31 125
MS.gene012582.t1 MTR_1690s0010 27.114 343 237 6 17 353 10 345 4.50e-30 120
MS.gene012582.t1 MTR_8g083530 26.829 328 215 5 17 332 24 338 4.76e-30 121
MS.gene012582.t1 MTR_2g097950 26.742 445 282 15 44 467 14 435 3.00e-26 112
MS.gene012582.t1 MTR_3g088150 25.546 458 314 12 39 485 7 448 1.53e-25 109
MS.gene012582.t1 MTR_8g094600 25.874 429 283 13 53 467 74 481 3.03e-25 109
MS.gene012582.t1 MTR_1g029840 25.285 439 301 11 41 468 7 429 9.97e-25 107
MS.gene012582.t1 MTR_1g029840 25.000 432 299 10 46 468 14 429 1.17e-24 107
MS.gene012582.t1 MTR_8g076480 26.353 425 286 11 53 467 14 421 6.40e-23 102
MS.gene012582.t1 MTR_2g097950 24.601 439 264 14 44 467 14 400 8.99e-18 86.3
MS.gene012582.t1 MTR_1314s0010 27.246 334 206 10 158 468 1 320 3.29e-17 83.6
MS.gene012582.t1 MTR_4g065040 28.289 304 197 11 158 448 105 400 6.46e-16 80.5
MS.gene012582.t1 MTR_4g107940 25.352 355 231 13 22 360 57 393 2.10e-13 72.8
MS.gene012582.t1 MTR_4g107940 25.352 355 231 13 22 360 57 393 2.65e-13 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene012582.t1 AT2G24270 89.516 496 52 0 1 496 41 536 0.0 939
MS.gene012582.t1 AT2G24270 89.516 496 52 0 1 496 1 496 0.0 938
MS.gene012582.t1 AT2G24270 89.516 496 52 0 1 496 1 496 0.0 938
MS.gene012582.t1 AT2G24270 89.516 496 52 0 1 496 1 496 0.0 938
MS.gene012582.t1 AT1G74920 35.197 483 282 12 17 477 9 482 1.40e-70 233
MS.gene012582.t1 AT1G74920 34.990 483 278 13 17 477 9 477 2.56e-68 227
MS.gene012582.t1 AT1G79440 31.130 469 306 6 22 482 59 518 2.64e-65 220
MS.gene012582.t1 AT3G48170 30.913 482 304 12 17 477 9 482 2.92e-61 209
MS.gene012582.t1 AT3G48000 30.223 493 306 11 21 493 63 537 3.55e-58 201
MS.gene012582.t1 AT1G23800 30.435 483 316 9 22 493 60 533 8.24e-58 200
MS.gene012582.t1 AT3G24503 28.571 483 326 8 17 488 21 495 9.51e-54 189
MS.gene012582.t1 AT3G66658 29.278 485 314 13 3 467 35 510 1.08e-46 171
MS.gene012582.t1 AT3G66658 29.184 490 308 14 3 467 35 510 1.97e-46 171
MS.gene012582.t1 AT2G14170 28.302 477 316 11 22 483 11 476 7.95e-43 159
MS.gene012582.t1 AT2G14170 28.481 474 315 10 22 482 120 582 4.89e-42 158
MS.gene012582.t1 AT2G14170 28.302 477 316 11 22 483 120 585 7.14e-42 158
MS.gene012582.t1 AT1G54100 24.898 490 328 13 19 487 24 494 6.43e-34 134
MS.gene012582.t1 AT1G54100 24.898 490 328 13 19 487 24 494 6.43e-34 134
MS.gene012582.t1 AT1G23800 30.380 316 205 6 22 330 60 367 1.21e-33 132
MS.gene012582.t1 AT1G44170 25.587 426 300 12 51 468 9 425 2.83e-25 108
MS.gene012582.t1 AT1G44170 25.587 426 300 12 51 468 9 425 2.83e-25 108
MS.gene012582.t1 AT1G44170 27.129 317 222 7 158 468 49 362 5.50e-25 107
MS.gene012582.t1 AT4G34240 24.594 431 288 11 53 468 65 473 6.22e-23 102
MS.gene012582.t1 AT4G34240 24.594 431 288 11 53 468 80 488 6.45e-23 102
MS.gene012582.t1 AT4G34240 27.129 317 222 6 158 468 33 346 4.90e-21 95.5
MS.gene012582.t1 AT4G36250 27.554 323 214 10 158 467 108 423 2.18e-20 94.4
MS.gene012582.t1 AT5G62530 23.429 350 236 14 19 353 56 388 2.44e-14 75.9
MS.gene012582.t1 AT4G34240 24.444 315 203 9 53 354 80 372 3.48e-14 74.7

Find 135 sgRNAs with CRISPR-Local

Find 274 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCCTTCTCTCTTGTATTCT+TGG 0.177591 8.1:-2476326 None:intergenic
CACCAAGCCTTCAATGAAAT+TGG 0.219619 8.1:-2476271 None:intergenic
CTTGGAAGTGAGGCAATATT+TGG 0.238356 8.1:-2474390 None:intergenic
GTTGCTGCAAACATTATAAA+AGG 0.248305 8.1:+2475626 MS.gene012582:CDS
TCTCATTTGGCCTTTGCTAT+TGG 0.249553 8.1:+2476350 MS.gene012582:CDS
CTCCCAAGAGGAAGTTAATA+AGG 0.272304 8.1:+2473987 MS.gene012582:CDS
GGTCTAATCAGCTGTGTTAC+TGG 0.308486 8.1:+2475349 MS.gene012582:CDS
TGCTAGCAACTTTGGACTTC+AGG 0.313262 8.1:+2476476 MS.gene012582:CDS
TATTGAGGCTTTCTTGTAGT+AGG 0.325145 8.1:-2473019 None:intergenic
ACAGAATTGATCCTAATTAC+AGG 0.326513 8.1:-2476429 None:intergenic
GATTCCGTTACAAATGGAAT+TGG 0.329253 8.1:+2475556 MS.gene012582:CDS
GGTATAAAAGACAGTGGAAT+TGG 0.332029 8.1:+2477417 MS.gene012582:CDS
TATTTGGTCCTTTCATTTCC+CGG 0.335147 8.1:-2474374 None:intergenic
CTTTGCTATTGGATAATGTT+AGG 0.338290 8.1:+2476361 MS.gene012582:CDS
TTGCAGCTTTGTGTTCTTTG+AGG 0.338729 8.1:-2474098 None:intergenic
ATTGCTCCTGCACTCATTGC+TGG 0.338801 8.1:+2474782 MS.gene012582:CDS
GAAGAAGGAGTAAGGATTCT+TGG 0.343223 8.1:+2474320 MS.gene012582:CDS
TCTTGGAGAGGGAAAGTTCT+TGG 0.345028 8.1:+2474337 MS.gene012582:CDS
GTTCATTGCTTTCACTTGGC+TGG 0.348410 8.1:+2475316 MS.gene012582:CDS
AGAGGAAGTTAATAAGGTTA+TGG 0.352924 8.1:+2473993 MS.gene012582:CDS
TGAAGATGCTGACCTTGATT+TGG 0.358975 8.1:+2475604 MS.gene012582:CDS
AACACAGCTGATTAGACCTT+TGG 0.359110 8.1:-2475344 None:intergenic
CATTGTAATGCTAGCAACTT+TGG 0.359882 8.1:+2476468 MS.gene012582:CDS
ATCCAGGAGTGAACTGTATA+AGG 0.361239 8.1:+2475407 MS.gene012582:CDS
ATCCTAATTACAGGCAAAAC+TGG 0.370576 8.1:-2476420 None:intergenic
TCCCATGCAATTCTCATGTC+TGG 0.371621 8.1:-2476384 None:intergenic
CATGGTTCATTGCTTTCACT+TGG 0.375400 8.1:+2475312 MS.gene012582:CDS
AGATTGACTGGATAGTTAAA+AGG 0.381527 8.1:-2474746 None:intergenic
AGCCAATTTCATTGAAGGCT+TGG 0.386673 8.1:+2476269 MS.gene012582:CDS
AAATGATCTGGCCCACGAGC+TGG 0.391227 8.1:-2477158 None:intergenic
ATTAGTGATGCAATGGAATC+AGG 0.394652 8.1:+2477113 MS.gene012582:CDS
ATGGCTAAGATCACTCCTAA+TGG 0.394955 8.1:-2474719 None:intergenic
TTTATAAGTTTCACCTGAAA+GGG 0.396189 8.1:-2477182 None:intergenic
TAACCTTATTAACTTCCTCT+TGG 0.406814 8.1:-2473990 None:intergenic
TCATCAGCCAATTTCATTGA+AGG 0.421085 8.1:+2476264 MS.gene012582:CDS
GGTTGTAAGATCTGGTGATT+TGG 0.422138 8.1:+2474283 MS.gene012582:intron
TACTGCTGTTAAGGTTGTCT+TGG 0.427731 8.1:+2476131 MS.gene012582:CDS
GCTGATGATTCTGATACAAC+TGG 0.428644 8.1:-2476249 None:intergenic
ATTGCATGGGAGGAGCCATT+TGG 0.428782 8.1:+2476396 MS.gene012582:CDS
TCAGAGGTGTACTGCTGTTA+AGG 0.430225 8.1:+2476122 MS.gene012582:CDS
TCAATGAAGGTTGTAAGATC+TGG 0.431004 8.1:+2474275 MS.gene012582:intron
AACCTTATTAACTTCCTCTT+GGG 0.435727 8.1:-2473989 None:intergenic
AGGATATAAATTACCTGAGT+TGG 0.437333 8.1:-2474827 None:intergenic
AGCTTCACTGGTGGAGATAC+CGG 0.437992 8.1:+2475506 MS.gene012582:intron
AGAGAGAAGGGAATCTCATT+TGG 0.440505 8.1:+2476337 MS.gene012582:CDS
AATGATCTGGCCCACGAGCT+GGG 0.441052 8.1:-2477157 None:intergenic
TGTCATCATGTTTATGCTGT+TGG 0.446435 8.1:-2477454 None:intergenic
ACTGGCAAAGGCTCGGAGAT+TGG 0.449931 8.1:+2475367 MS.gene012582:CDS
GCCAAGCCCTTCTTATACCA+TGG 0.453850 8.1:+2477503 MS.gene012582:CDS
TGGCTAAGATCACTCCTAAT+GGG 0.455898 8.1:-2474718 None:intergenic
CGGCATTGCAATTTCAAAGA+AGG 0.458206 8.1:+2475526 MS.gene012582:CDS
ACACAGCTGATTAGACCTTT+GGG 0.458219 8.1:-2475343 None:intergenic
CTTCTTTGAAATTGCAATGC+CGG 0.461936 8.1:-2475525 None:intergenic
ATTGAGGCTTTCTTGTAGTA+GGG 0.466187 8.1:-2473018 None:intergenic
TTACCTTGAACTTTGTATTG+AGG 0.467120 8.1:-2473034 None:intergenic
ATTCCGTTACAAATGGAATT+GGG 0.467485 8.1:+2475557 MS.gene012582:CDS
ACCTGAAAGGGAAAATGATC+TGG 0.469238 8.1:-2477170 None:intergenic
AAGCCTCAATACAAAGTTCA+AGG 0.469357 8.1:+2473031 MS.gene012582:CDS
AATATTATGCTGATGGAGAA+TGG 0.471141 8.1:+2472957 MS.gene012582:CDS
GTTTCTTACTGTGCTGAAGA+AGG 0.471237 8.1:+2474305 MS.gene012582:CDS
AGGATCAATTCTGTTGAAGA+AGG 0.476795 8.1:+2476438 MS.gene012582:CDS
AACATCTCCGTCTAAAATCT+CGG 0.486907 8.1:-2472930 None:intergenic
ACAGGCAAAACTGGTCCAAA+TGG 0.487090 8.1:-2476411 None:intergenic
TTTGAGACAGCAAGATTGAC+TGG 0.493697 8.1:-2474758 None:intergenic
ATATAAATTACCTGAGTTGG+AGG 0.495354 8.1:-2474824 None:intergenic
TCACTCCTGGATGCATTGTA+AGG 0.496013 8.1:-2475396 None:intergenic
TATTAGCCCATGGTATAAGA+AGG 0.496914 8.1:-2477510 None:intergenic
CAAAATCAGCACAAAAGTCA+TGG 0.497875 8.1:+2474022 MS.gene012582:CDS
TGTTAAGGTTGTCTTGGTAA+TGG 0.498386 8.1:+2476137 MS.gene012582:CDS
CACCTTATACAGTTCACTCC+TGG 0.499695 8.1:-2475409 None:intergenic
TTGCTATCCGATAGCTTCAC+TGG 0.502581 8.1:+2475494 MS.gene012582:intron
AGCTGTTGCAGCTCTTCACA+TGG 0.503024 8.1:+2475294 MS.gene012582:CDS
GGAGTAAGGATTCTTGGAGA+GGG 0.504125 8.1:+2474326 MS.gene012582:CDS
CAAAGACCCCACTTTGGAAG+AGG 0.506615 8.1:+2474046 MS.gene012582:CDS
ATCAGCTGTGTTACTGGCAA+AGG 0.512241 8.1:+2475355 MS.gene012582:CDS
TGTGCTCAAGCCTCCAACTC+AGG 0.519656 8.1:+2474814 MS.gene012582:CDS
AGGAGTAAGGATTCTTGGAG+AGG 0.519697 8.1:+2474325 MS.gene012582:CDS
GTTTACAAATATTATGCTGA+TGG 0.519827 8.1:+2472950 MS.gene012582:CDS
AGGCATGATTCCGTTACAAA+TGG 0.524495 8.1:+2475550 MS.gene012582:CDS
GAATGGAAGAAATCTACCTC+TGG 0.525185 8.1:+2472974 MS.gene012582:CDS
GTGATATCACAGTCATCCTC+AGG 0.527858 8.1:-2476225 None:intergenic
CCAAGCCCTTCTTATACCAT+GGG 0.527974 8.1:+2477504 MS.gene012582:CDS
CCTCCCAATTCCATTTGTAA+CGG 0.528245 8.1:-2475560 None:intergenic
GCTTTGCTATTTCTTTGACT+AGG 0.532020 8.1:-2474131 None:intergenic
AGACAGTGGAATTGGATCAC+AGG 0.536723 8.1:+2477425 MS.gene012582:CDS
GAATTTCCAGCAATGAGTGC+AGG 0.537751 8.1:-2474788 None:intergenic
ACTGTGCTGAAGAAGGAGTA+AGG 0.539338 8.1:+2474312 MS.gene012582:CDS
ATAAATTCTGCCCCAGCTCG+TGG 0.539359 8.1:+2477146 MS.gene012582:CDS
TGCCAAGAATACAAGAGAGA+AGG 0.540006 8.1:+2476324 MS.gene012582:CDS
GCCAAGAATACAAGAGAGAA+GGG 0.542461 8.1:+2476325 MS.gene012582:CDS
GTGAATGATGCTAAACAGAA+AGG 0.552242 8.1:+2476291 MS.gene012582:CDS
ATTGCAATTTCAAAGAAGGC+AGG 0.554951 8.1:+2475530 MS.gene012582:CDS
CTGTGTTACTGGCAAAGGCT+CGG 0.559016 8.1:+2475360 MS.gene012582:CDS
CAAATATTGCCTCACTTCCA+AGG 0.562000 8.1:+2474391 MS.gene012582:CDS
GATTGAGAAAGTGAAGGCTA+AGG 0.563444 8.1:+2476179 MS.gene012582:CDS
GCTGCAAACATTATAAAAGG+AGG 0.564563 8.1:+2475629 MS.gene012582:CDS
TGAAATAGACCTTGGAAGTG+AGG 0.565780 8.1:-2474400 None:intergenic
GACAGTGGAATTGGATCACA+GGG 0.567866 8.1:+2477426 MS.gene012582:CDS
TGTTTGCAGCAACCAAATCA+AGG 0.571187 8.1:-2475616 None:intergenic
ATGATCTGGCCCACGAGCTG+GGG 0.571612 8.1:-2477156 None:intergenic
GTTCAGCCCTCTTCCAAAGT+GGG 0.573357 8.1:-2474053 None:intergenic
GACTTCCTTACAATGCATCC+AGG 0.575105 8.1:+2475391 MS.gene012582:CDS
ATTAGCCCATGGTATAAGAA+GGG 0.576461 8.1:-2477509 None:intergenic
CATGGGCAAAGACCCCACTT+TGG 0.577477 8.1:+2474040 MS.gene012582:CDS
GGCCAGACATGAGAATTGCA+TGG 0.578690 8.1:+2476382 MS.gene012582:CDS
CTGATGATTCTGATACAACT+GGG 0.582007 8.1:-2476248 None:intergenic
AAAATCAGCACAAAAGTCAT+GGG 0.588574 8.1:+2474023 MS.gene012582:CDS
AAAGACCCCACTTTGGAAGA+GGG 0.592379 8.1:+2474047 MS.gene012582:CDS
AAGGTGGCAAAACTAAGTGT+TGG 0.592797 8.1:+2476198 MS.gene012582:CDS
TGGATAGTTAAAAGGCGGAA+TGG 0.594322 8.1:-2474738 None:intergenic
CCCATGGTATAAGAAGGGCT+TGG 0.597949 8.1:-2477504 None:intergenic
TAAATTCTGCCCCAGCTCGT+GGG 0.599729 8.1:+2477147 MS.gene012582:CDS
AGTTCAGCCCTCTTCCAAAG+TGG 0.601662 8.1:-2474054 None:intergenic
GCCAGACATGAGAATTGCAT+GGG 0.604840 8.1:+2476383 MS.gene012582:CDS
AATGATGATTAGTGATGCAA+TGG 0.607091 8.1:+2477106 MS.gene012582:CDS
TGAGAAAGTGAAGGCTAAGG+TGG 0.608047 8.1:+2476182 MS.gene012582:CDS
AGTTGCTAGCATTACAATGG+TGG 0.608323 8.1:-2476464 None:intergenic
AGCAAAAGATGCAGTTACAG+AGG 0.611642 8.1:+2474155 MS.gene012582:CDS
AGACATGAGAATTGCATGGG+AGG 0.621616 8.1:+2476386 MS.gene012582:CDS
TAGTTTGATTGAGAAAGTGA+AGG 0.621702 8.1:+2476173 MS.gene012582:CDS
TTCAGCCCTCTTCCAAAGTG+GGG 0.625906 8.1:-2474052 None:intergenic
CCATGCAGCTTGCTCCCAAG+AGG 0.628360 8.1:+2473975 MS.gene012582:intron
AATATGCTATTATTAGCCCA+TGG 0.629261 8.1:-2477520 None:intergenic
CCGTTACAAATGGAATTGGG+AGG 0.629301 8.1:+2475560 MS.gene012582:CDS
AGGGCTTGGCAAGTTTATCA+CGG 0.633923 8.1:-2477490 None:intergenic
CAAAGTTGCTAGCATTACAA+TGG 0.639762 8.1:-2476467 None:intergenic
ACTAAGTGTTGGACCACCTG+AGG 0.649624 8.1:+2476209 MS.gene012582:CDS
GAGGGCTGAACTTCTTCACA+AGG 0.649776 8.1:+2474065 MS.gene012582:CDS
CTATCCGATAGCTTCACTGG+TGG 0.653530 8.1:+2475497 MS.gene012582:intron
TCAGGGATGTGTGTTCACAA+AGG 0.663222 8.1:+2477070 MS.gene012582:intron
TTGACTGGATAGTTAAAAGG+CGG 0.663722 8.1:-2474743 None:intergenic
TCACAGGGTATAAAAGACAG+TGG 0.671884 8.1:+2477411 MS.gene012582:intron
CTAACATTATCCAATAGCAA+AGG 0.679429 8.1:-2476360 None:intergenic
ATATCACAGTCATCCTCAGG+TGG 0.693050 8.1:-2476222 None:intergenic
TGATGATTCTGATACAACTG+GGG 0.745364 8.1:-2476247 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAAATTTTTTCAATGA+AGG + chr8.1:2474262-2474281 MS.gene012582:intron 10.0%
!! ACTTTATAAAGTCAATAAAT+TGG + chr8.1:2474508-2474527 MS.gene012582:intron 15.0%
!! ATTTACTTCATAAATATAAC+CGG + chr8.1:2475729-2475748 MS.gene012582:intron 15.0%
!! CATATCATTAAATTAATGTT+TGG - chr8.1:2476921-2476940 None:intergenic 15.0%
!! TAAAAAAAAAATGATTTCAG+AGG - chr8.1:2476857-2476876 None:intergenic 15.0%
!! TACAAAGTAACTAAAATAAA+AGG - chr8.1:2473086-2473105 None:intergenic 15.0%
!!! AAAACACTTTATTTTTAACT+TGG - chr8.1:2476738-2476757 None:intergenic 15.0%
!!! CTGAAATCATTTTTTTTTTA+GGG + chr8.1:2476857-2476876 MS.gene012582:intron 15.0%
!!! TCTGAAATCATTTTTTTTTT+AGG + chr8.1:2476856-2476875 MS.gene012582:intron 15.0%
!!! TTTATTTTGGTTTCTTTTAA+CGG - chr8.1:2475198-2475217 None:intergenic 15.0%
!!! TTTTATTTTTTCATGAAAAG+TGG + chr8.1:2476099-2476118 MS.gene012582:intron 15.0%
!! AATACCAAATATACACAAAA+TGG - chr8.1:2477214-2477233 None:intergenic 20.0%
!! ACTTGTAAATTAAATGATCA+TGG + chr8.1:2474614-2474633 MS.gene012582:intron 20.0%
!! ATATTTATGAAGTAAATGCA+TGG - chr8.1:2475726-2475745 None:intergenic 20.0%
!! ATTAGAATTTAATTCATGCA+CGG - chr8.1:2476982-2477001 None:intergenic 20.0%
!! ATTGTAAAGAATCATCAAAA+CGG - chr8.1:2473718-2473737 None:intergenic 20.0%
!! CATGTTAAATAAAATTACCT+CGG + chr8.1:2473566-2473585 MS.gene012582:intron 20.0%
!! CTTATTAAGAAAACAGTTTA+TGG - chr8.1:2475039-2475058 None:intergenic 20.0%
!! TTAGCAGTTATATGAATAAA+CGG - chr8.1:2475946-2475965 None:intergenic 20.0%
!! TTGCAATTTAAATACATTCA+TGG - chr8.1:2475767-2475786 None:intergenic 20.0%
!! TTTGTGTATATTTGGTATTA+CGG + chr8.1:2477215-2477234 MS.gene012582:intron 20.0%
!!! AAACTCATTTTAGTATTAGA+AGG - chr8.1:2476562-2476581 None:intergenic 20.0%
!!! AACTCAAACTATTTTCATAT+AGG + chr8.1:2475013-2475032 MS.gene012582:intron 20.0%
!!! CTGACATAAACTTTTTATTT+TGG - chr8.1:2475211-2475230 None:intergenic 20.0%
!!! GACTTCAAAATTTTATAACA+AGG + chr8.1:2473200-2473219 MS.gene012582:intron 20.0%
!!! GTAATTTTATTTAACATGCT+TGG - chr8.1:2473564-2473583 None:intergenic 20.0%
!!! GTTTGTTGTTTTTGTAATTT+TGG - chr8.1:2477347-2477366 None:intergenic 20.0%
!!! TACTAAAATGAGTTTAGTTT+TGG + chr8.1:2476567-2476586 MS.gene012582:intron 20.0%
!!! TCTTATTGTTTTATTTTGCT+TGG + chr8.1:2474654-2474673 MS.gene012582:intron 20.0%
! AATATAAGATGAATGTTGCA+TGG + chr8.1:2476022-2476041 MS.gene012582:intron 25.0%
! ACTAACAAAAGATACATTTG+AGG + chr8.1:2475866-2475885 MS.gene012582:intron 25.0%
! ACTTGAAAACAAAAGAGAAA+GGG - chr8.1:2473063-2473082 None:intergenic 25.0%
! AGAAAACAACTATGTTCAAT+AGG + chr8.1:2473929-2473948 MS.gene012582:intron 25.0%
! AGAAATGAAGTTATAAGGAA+TGG + chr8.1:2473834-2473853 MS.gene012582:intron 25.0%
! AGATACTGTTAAAAACGTTT+AGG + chr8.1:2473276-2473295 MS.gene012582:intron 25.0%
! ATTGAACTTGAAATTGTTCA+GGG + chr8.1:2477053-2477072 MS.gene012582:intron 25.0%
! CGAGAAATTATGAAAATGAT+TGG + chr8.1:2474237-2474256 MS.gene012582:intron 25.0%
! GATACTGTTAAAAACGTTTA+GGG + chr8.1:2473277-2473296 MS.gene012582:intron 25.0%
! GTTTACAAATATTATGCTGA+TGG + chr8.1:2472950-2472969 MS.gene012582:CDS 25.0%
! TAACAACATAAGTTAATGGA+TGG - chr8.1:2473417-2473436 None:intergenic 25.0%
! TCAAATAAATCAATCCAAAC+AGG + chr8.1:2475138-2475157 MS.gene012582:intron 25.0%
! TTTATAAGTTTCACCTGAAA+GGG - chr8.1:2477185-2477204 None:intergenic 25.0%
!! AATCTCTGAATTTTACGAAT+TGG + chr8.1:2473350-2473369 MS.gene012582:intron 25.0%
!! ATATGAATAAACGGTCATTT+TGG - chr8.1:2475937-2475956 None:intergenic 25.0%
!! ATTAAGCTTTTTATCGAAAC+AGG - chr8.1:2474922-2474941 None:intergenic 25.0%
!! ATTTGCAAAAGCTCTAATTA+TGG + chr8.1:2477270-2477289 MS.gene012582:intron 25.0%
!! CAAATGTTTTATCATTCACA+GGG + chr8.1:2477396-2477415 MS.gene012582:intron 25.0%
!! CAATCCATTTTGTGTATATT+TGG + chr8.1:2477207-2477226 MS.gene012582:intron 25.0%
!! TCAAATGTTTTATCATTCAC+AGG + chr8.1:2477395-2477414 MS.gene012582:intron 25.0%
!! TTAAGCTTTTTATCGAAACA+GGG - chr8.1:2474921-2474940 None:intergenic 25.0%
!! TTTAGAACTGGAAAATCAAT+AGG + chr8.1:2474478-2474497 MS.gene012582:intron 25.0%
!! TTTTACTGTGTGTTTGATTA+TGG + chr8.1:2476685-2476704 MS.gene012582:intron 25.0%
!! TTTTATAAGTTTCACCTGAA+AGG - chr8.1:2477186-2477205 None:intergenic 25.0%
!!! AAAACTGATTTTGACATGTT+TGG - chr8.1:2476831-2476850 None:intergenic 25.0%
!!! TACTTCAATCATTTTAGAAC+TGG + chr8.1:2474466-2474485 MS.gene012582:intron 25.0%
!!! TATGAATAAACGGTCATTTT+GGG - chr8.1:2475936-2475955 None:intergenic 25.0%
AAAATCAGCACAAAAGTCAT+GGG + chr8.1:2474023-2474042 MS.gene012582:CDS 30.0%
AAACACACAGTAAAAACGTT+TGG - chr8.1:2476680-2476699 None:intergenic 30.0%
AACCTTATTAACTTCCTCTT+GGG - chr8.1:2473992-2474011 None:intergenic 30.0%
AAGTGGATAGTATGAGAATA+TGG - chr8.1:2474890-2474909 None:intergenic 30.0%
AATATTATGCTGATGGAGAA+TGG + chr8.1:2472957-2472976 MS.gene012582:CDS 30.0%
AATGATGATTAGTGATGCAA+TGG + chr8.1:2477106-2477125 MS.gene012582:CDS 30.0%
AATTGATTGTTGAAGTGAGA+GGG - chr8.1:2476514-2476533 None:intergenic 30.0%
ACAGAATTGATCCTAATTAC+AGG - chr8.1:2476432-2476451 None:intergenic 30.0%
ACTTTGTATGATTCTTCATG+TGG + chr8.1:2473098-2473117 MS.gene012582:intron 30.0%
AGAGGAAGTTAATAAGGTTA+TGG + chr8.1:2473993-2474012 MS.gene012582:CDS 30.0%
AGATTGACTGGATAGTTAAA+AGG - chr8.1:2474749-2474768 None:intergenic 30.0%
AGGATATAAATTACCTGAGT+TGG - chr8.1:2474830-2474849 None:intergenic 30.0%
ATAAGCTGACAACAACTTAT+TGG + chr8.1:2475054-2475073 MS.gene012582:intron 30.0%
ATATGTAGTGAAATAGACCT+TGG - chr8.1:2474411-2474430 None:intergenic 30.0%
ATTCCGTTACAAATGGAATT+GGG + chr8.1:2475557-2475576 MS.gene012582:CDS 30.0%
ATTGATGTGAGATCTACATA+GGG + chr8.1:2473632-2473651 MS.gene012582:intron 30.0%
CATGTGCATATTTGATGTTA+CGG - chr8.1:2477304-2477323 None:intergenic 30.0%
CATTGAACTTGAAATTGTTC+AGG + chr8.1:2477052-2477071 MS.gene012582:intron 30.0%
CCATTAACTTATGTTGTTAG+AGG + chr8.1:2473418-2473437 MS.gene012582:intron 30.0%
CCTCTAACAACATAAGTTAA+TGG - chr8.1:2473421-2473440 None:intergenic 30.0%
CTAACATTATCCAATAGCAA+AGG - chr8.1:2476363-2476382 None:intergenic 30.0%
GACTTGAAAACAAAAGAGAA+AGG - chr8.1:2473064-2473083 None:intergenic 30.0%
GGTGTTAAAAATGATTTCAG+AGG - chr8.1:2476885-2476904 None:intergenic 30.0%
GTTGCTGCAAACATTATAAA+AGG + chr8.1:2475626-2475645 MS.gene012582:CDS 30.0%
TAACCTTATTAACTTCCTCT+TGG - chr8.1:2473993-2474012 None:intergenic 30.0%
TAATTGATTGTTGAAGTGAG+AGG - chr8.1:2476515-2476534 None:intergenic 30.0%
TAGTTTGATTGAGAAAGTGA+AGG + chr8.1:2476173-2476192 MS.gene012582:CDS 30.0%
TATTGATGTGAGATCTACAT+AGG + chr8.1:2473631-2473650 MS.gene012582:intron 30.0%
TCATACTATCCACTTTCTTA+TGG + chr8.1:2474895-2474914 MS.gene012582:intron 30.0%
TCGTCAAAAACACTACATAT+GGG + chr8.1:2474862-2474881 MS.gene012582:intron 30.0%
TTACCTTGAACTTTGTATTG+AGG - chr8.1:2473037-2473056 None:intergenic 30.0%
TTCTTTACTGTTCCTTCTAA+TGG + chr8.1:2475248-2475267 MS.gene012582:intron 30.0%
! AATACATTCATGGATTGTAG+TGG - chr8.1:2475757-2475776 None:intergenic 30.0%
! ATATAAATTACCTGAGTTGG+AGG - chr8.1:2474827-2474846 None:intergenic 30.0%
! ATTTCCCTAATTGCTCTTTT+CGG + chr8.1:2473809-2473828 MS.gene012582:intron 30.0%
! CATTAGCTAGAACTTTTATG+AGG - chr8.1:2475169-2475188 None:intergenic 30.0%
! TAAAAGGAGGTTTTTCATAC+AGG + chr8.1:2475642-2475661 MS.gene012582:CDS 30.0%
! TAACGTGCAACAAAAGTTTT+TGG - chr8.1:2473497-2473516 None:intergenic 30.0%
! TGCTTTTGTTCATCCTTTTT+AGG - chr8.1:2473156-2473175 None:intergenic 30.0%
!! ATTGATTTTCAGATCCCATT+AGG + chr8.1:2474704-2474723 MS.gene012582:intron 30.0%
!! CTTTGCTATTGGATAATGTT+AGG + chr8.1:2476361-2476380 MS.gene012582:CDS 30.0%
!! GAATAAGTTAAGTGTTGCTT+AGG + chr8.1:2474204-2474223 MS.gene012582:intron 30.0%
!! TTGCTGATTCAAAAAACTCA+AGG + chr8.1:2473751-2473770 MS.gene012582:intron 30.0%
AAGCCTCAATACAAAGTTCA+AGG + chr8.1:2473031-2473050 MS.gene012582:CDS 35.0%
AATTGCATACGAAAATTCCG+AGG - chr8.1:2473586-2473605 None:intergenic 35.0%
ACTGTTAAAAACGTTTAGGG+AGG + chr8.1:2473280-2473299 MS.gene012582:intron 35.0%
AGGATCAATTCTGTTGAAGA+AGG + chr8.1:2476438-2476457 MS.gene012582:CDS 35.0%
ATATTTGGTATTACGGTCGA+TGG + chr8.1:2477222-2477241 MS.gene012582:intron 35.0%
ATCCTAATTACAGGCAAAAC+TGG - chr8.1:2476423-2476442 None:intergenic 35.0%
ATTAGTGATGCAATGGAATC+AGG + chr8.1:2477113-2477132 MS.gene012582:CDS 35.0%
ATTGAGGCTTTCTTGTAGTA+GGG - chr8.1:2473021-2473040 None:intergenic 35.0%
ATTGCAATTTCAAAGAAGGC+AGG + chr8.1:2475530-2475549 MS.gene012582:CDS 35.0%
CAAAATCAGCACAAAAGTCA+TGG + chr8.1:2474022-2474041 MS.gene012582:CDS 35.0%
CAAAGTTGCTAGCATTACAA+TGG - chr8.1:2476470-2476489 None:intergenic 35.0%
CATTGTAATGCTAGCAACTT+TGG + chr8.1:2476468-2476487 MS.gene012582:CDS 35.0%
CTCGTCAAAAACACTACATA+TGG + chr8.1:2474861-2474880 MS.gene012582:intron 35.0%
CTGATGATTCTGATACAACT+GGG - chr8.1:2476251-2476270 None:intergenic 35.0%
GATGTGATCATGTGAGAATA+TGG + chr8.1:2473120-2473139 MS.gene012582:intron 35.0%
GATTCCGTTACAAATGGAAT+TGG + chr8.1:2475556-2475575 MS.gene012582:CDS 35.0%
GCTGCAAACATTATAAAAGG+AGG + chr8.1:2475629-2475648 MS.gene012582:CDS 35.0%
GGTATAAAAGACAGTGGAAT+TGG + chr8.1:2477417-2477436 MS.gene012582:CDS 35.0%
GTCGTATAAACTGTAAGCAT+CGG - chr8.1:2473787-2473806 None:intergenic 35.0%
GTGAATGATGCTAAACAGAA+AGG + chr8.1:2476291-2476310 MS.gene012582:CDS 35.0%
TATTGAGGCTTTCTTGTAGT+AGG - chr8.1:2473022-2473041 None:intergenic 35.0%
TATTTGGTCCTTTCATTTCC+CGG - chr8.1:2474377-2474396 None:intergenic 35.0%
TCAATGAAGGTTGTAAGATC+TGG + chr8.1:2474275-2474294 MS.gene012582:intron 35.0%
TCATCAGCCAATTTCATTGA+AGG + chr8.1:2476264-2476283 MS.gene012582:CDS 35.0%
TGATGATTCTGATACAACTG+GGG - chr8.1:2476250-2476269 None:intergenic 35.0%
TGTATCTTTCGTTAGTCGTT+TGG - chr8.1:2475830-2475849 None:intergenic 35.0%
TGTCATCATGTTTATGCTGT+TGG - chr8.1:2477457-2477476 None:intergenic 35.0%
TGTTAAGGTTGTCTTGGTAA+TGG + chr8.1:2476137-2476156 MS.gene012582:CDS 35.0%
TGTTGTTAGAGGCTATAACT+TGG + chr8.1:2473429-2473448 MS.gene012582:intron 35.0%
TTGACTGGATAGTTAAAAGG+CGG - chr8.1:2474746-2474765 None:intergenic 35.0%
TTGATGTGAGATCTACATAG+GGG + chr8.1:2473633-2473652 MS.gene012582:intron 35.0%
TTTGACGAGTATCACAATGA+AGG - chr8.1:2474850-2474869 None:intergenic 35.0%
! AACATCTCCGTCTAAAATCT+CGG - chr8.1:2472933-2472952 None:intergenic 35.0%
! AGCTAGAACTTTTATGAGGT+AGG - chr8.1:2475165-2475184 None:intergenic 35.0%
! ATAGTTTTCCGGGAAATGAA+AGG + chr8.1:2474366-2474385 MS.gene012582:CDS 35.0%
! ATGCATGTATCTCAGGATTT+TGG - chr8.1:2474541-2474560 None:intergenic 35.0%
! CAAGAAGCGTATGATGTAAT+TGG - chr8.1:2475989-2476008 None:intergenic 35.0%
! CTTGGTTTCAGATAGTTTTC+CGG + chr8.1:2474355-2474374 MS.gene012582:CDS 35.0%
! GCTAGAACTTTTATGAGGTA+GGG - chr8.1:2475164-2475183 None:intergenic 35.0%
! TTGGTTTCAGATAGTTTTCC+GGG + chr8.1:2474356-2474375 MS.gene012582:CDS 35.0%
! TTTTCATGAAAAGTGGTCAG+AGG + chr8.1:2476106-2476125 MS.gene012582:intron 35.0%
!! CAAAGTAGAAACTCTAGAGT+TGG - chr8.1:2473537-2473556 None:intergenic 35.0%
!! CTTCTTTGAAATTGCAATGC+CGG - chr8.1:2475528-2475547 None:intergenic 35.0%
!! GCTTTGCTATTTCTTTGACT+AGG - chr8.1:2474134-2474153 None:intergenic 35.0%
!! GTCAGTTTTCTTAGAGTGTT+TGG - chr8.1:2475893-2475912 None:intergenic 35.0%
!!! ACAAAAGTTTTTGGTCACGT+AGG - chr8.1:2473488-2473507 None:intergenic 35.0%
!!! ATTTTGCTTGGTTGATGATG+TGG + chr8.1:2474666-2474685 MS.gene012582:intron 35.0%
AACACAGCTGATTAGACCTT+TGG - chr8.1:2475347-2475366 None:intergenic 40.0%
AAGGTGGCAAAACTAAGTGT+TGG + chr8.1:2476198-2476217 MS.gene012582:CDS 40.0%
AATTAGCACTTCTGGTGCAA+AGG + chr8.1:2475680-2475699 MS.gene012582:intron 40.0%
ACACAGCTGATTAGACCTTT+GGG - chr8.1:2475346-2475365 None:intergenic 40.0%
ACCTGAAAGGGAAAATGATC+TGG - chr8.1:2477173-2477192 None:intergenic 40.0%
AGAGAGAAGGGAATCTCATT+TGG + chr8.1:2476337-2476356 MS.gene012582:CDS 40.0%
AGCAAAAGATGCAGTTACAG+AGG + chr8.1:2474155-2474174 MS.gene012582:CDS 40.0%
AGCCAATTTCATTGAAGGCT+TGG + chr8.1:2476269-2476288 MS.gene012582:CDS 40.0%
AGGCATGATTCCGTTACAAA+TGG + chr8.1:2475550-2475569 MS.gene012582:CDS 40.0%
AGTTGCTAGCATTACAATGG+TGG - chr8.1:2476467-2476486 None:intergenic 40.0%
ATCCAGGAGTGAACTGTATA+AGG + chr8.1:2475407-2475426 MS.gene012582:CDS 40.0%
ATGGCTAAGATCACTCCTAA+TGG - chr8.1:2474722-2474741 None:intergenic 40.0%
CAAATATTGCCTCACTTCCA+AGG + chr8.1:2474391-2474410 MS.gene012582:CDS 40.0%
CAAGTGTTTGTGAGAGCTAA+TGG - chr8.1:2475097-2475116 None:intergenic 40.0%
CACCAAGCCTTCAATGAAAT+TGG - chr8.1:2476274-2476293 None:intergenic 40.0%
CATGGTTCATTGCTTTCACT+TGG + chr8.1:2475312-2475331 MS.gene012582:CDS 40.0%
CATGTCTCAATTAGCACTTC+TGG + chr8.1:2475672-2475691 MS.gene012582:intron 40.0%
CCTCCCAATTCCATTTGTAA+CGG - chr8.1:2475563-2475582 None:intergenic 40.0%
CCTGAGATACATGCATTCAA+GGG + chr8.1:2474545-2474564 MS.gene012582:intron 40.0%
CGGCATTGCAATTTCAAAGA+AGG + chr8.1:2475526-2475545 MS.gene012582:CDS 40.0%
CGGCGAGAAATGAAGTTATA+AGG + chr8.1:2473829-2473848 MS.gene012582:intron 40.0%
CTCCCAAGAGGAAGTTAATA+AGG + chr8.1:2473987-2474006 MS.gene012582:CDS 40.0%
CTTGGAAGTGAGGCAATATT+TGG - chr8.1:2474393-2474412 None:intergenic 40.0%
GAAGAAGGAGTAAGGATTCT+TGG + chr8.1:2474320-2474339 MS.gene012582:CDS 40.0%
GAATGGAAGAAATCTACCTC+TGG + chr8.1:2472974-2472993 MS.gene012582:CDS 40.0%
GATTGAGAAAGTGAAGGCTA+AGG + chr8.1:2476179-2476198 MS.gene012582:CDS 40.0%
GCCAAGAATACAAGAGAGAA+GGG + chr8.1:2476325-2476344 MS.gene012582:CDS 40.0%
GCTGATGATTCTGATACAAC+TGG - chr8.1:2476252-2476271 None:intergenic 40.0%
GGTTGTAAGATCTGGTGATT+TGG + chr8.1:2474283-2474302 MS.gene012582:intron 40.0%
GTTTCTTACTGTGCTGAAGA+AGG + chr8.1:2474305-2474324 MS.gene012582:CDS 40.0%
TACTGCTGTTAAGGTTGTCT+TGG + chr8.1:2476131-2476150 MS.gene012582:CDS 40.0%
TCACAGGGTATAAAAGACAG+TGG + chr8.1:2477411-2477430 MS.gene012582:intron 40.0%
TCCCTTCTCTCTTGTATTCT+TGG - chr8.1:2476329-2476348 None:intergenic 40.0%
TCCTGAGATACATGCATTCA+AGG + chr8.1:2474544-2474563 MS.gene012582:intron 40.0%
TGAAATAGACCTTGGAAGTG+AGG - chr8.1:2474403-2474422 None:intergenic 40.0%
TGAAGATGCTGACCTTGATT+TGG + chr8.1:2475604-2475623 MS.gene012582:CDS 40.0%
TGATGTGAGATCTACATAGG+GGG + chr8.1:2473634-2473653 MS.gene012582:intron 40.0%
TGCATGGAGATCATTGTTAG+AGG - chr8.1:2473962-2473981 None:intergenic 40.0%
TGCCAAGAATACAAGAGAGA+AGG + chr8.1:2476324-2476343 MS.gene012582:CDS 40.0%
TGGATAGTTAAAAGGCGGAA+TGG - chr8.1:2474741-2474760 None:intergenic 40.0%
TGGCTAAGATCACTCCTAAT+GGG - chr8.1:2474721-2474740 None:intergenic 40.0%
TGTTTGCAGCAACCAAATCA+AGG - chr8.1:2475619-2475638 None:intergenic 40.0%
! GACCAGTTTTGCCTGTAATT+AGG + chr8.1:2476418-2476437 MS.gene012582:CDS 40.0%
! TCTCATTTGGCCTTTGCTAT+TGG + chr8.1:2476350-2476369 MS.gene012582:CDS 40.0%
! TCTGTAACTGCATCTTTTGC+TGG - chr8.1:2474156-2474175 None:intergenic 40.0%
! TTGCAGCTTTGTGTTCTTTG+AGG - chr8.1:2474101-2474120 None:intergenic 40.0%
! TTTGAGACAGCAAGATTGAC+TGG - chr8.1:2474761-2474780 None:intergenic 40.0%
!! TGGACTTGCTACACCTAAAA+AGG + chr8.1:2473140-2473159 MS.gene012582:intron 40.0%
!!! GATAGCAACACTTTTTCCAG+AGG - chr8.1:2472993-2473012 None:intergenic 40.0%
ACAGGCAAAACTGGTCCAAA+TGG - chr8.1:2476414-2476433 None:intergenic 45.0%
ACTGTGCTGAAGAAGGAGTA+AGG + chr8.1:2474312-2474331 MS.gene012582:CDS 45.0%
AGACAGTGGAATTGGATCAC+AGG + chr8.1:2477425-2477444 MS.gene012582:CDS 45.0%
AGACATGAGAATTGCATGGG+AGG + chr8.1:2476386-2476405 MS.gene012582:CDS 45.0%
AGCATCGTACAGCCATTAGA+AGG - chr8.1:2475263-2475282 None:intergenic 45.0%
AGGAGTAAGGATTCTTGGAG+AGG + chr8.1:2474325-2474344 MS.gene012582:CDS 45.0%
AGGGCTTGGCAAGTTTATCA+CGG - chr8.1:2477493-2477512 None:intergenic 45.0%
AGTGAAGCTATCGGATAGCA+AGG - chr8.1:2475495-2475514 None:intergenic 45.0%
ATATCACAGTCATCCTCAGG+TGG - chr8.1:2476225-2476244 None:intergenic 45.0%
ATCTCCACCAGTGAAGCTAT+CGG - chr8.1:2475504-2475523 None:intergenic 45.0%
CACCTTATACAGTTCACTCC+TGG - chr8.1:2475412-2475431 None:intergenic 45.0%
CCAAGCCCTTCTTATACCAT+GGG + chr8.1:2477504-2477523 MS.gene012582:CDS 45.0%
CCCTTGAATGCATGTATCTC+AGG - chr8.1:2474548-2474567 None:intergenic 45.0%
CCGTTACAAATGGAATTGGG+AGG + chr8.1:2475560-2475579 MS.gene012582:CDS 45.0%
CTCGCCGAAAAGAGCAATTA+GGG - chr8.1:2473816-2473835 None:intergenic 45.0%
CTGTACGATGCTGCATTTCA+GGG + chr8.1:2475271-2475290 MS.gene012582:intron 45.0%
GAAACAGGGCCATAAGAAAG+TGG - chr8.1:2474907-2474926 None:intergenic 45.0%
GAATTTCCAGCAATGAGTGC+AGG - chr8.1:2474791-2474810 None:intergenic 45.0%
GACAGTGGAATTGGATCACA+GGG + chr8.1:2477426-2477445 MS.gene012582:CDS 45.0%
GACTTCCTTACAATGCATCC+AGG + chr8.1:2475391-2475410 MS.gene012582:CDS 45.0%
GCAAGGTTACAAGTCAGGAT+AGG - chr8.1:2475478-2475497 None:intergenic 45.0%
GCCAGACATGAGAATTGCAT+GGG + chr8.1:2476383-2476402 MS.gene012582:CDS 45.0%
GCGTATGATGTAATTGGCTG+AGG - chr8.1:2475983-2476002 None:intergenic 45.0%
GGAGGAGTGAATTTGCAGAT+TGG + chr8.1:2473298-2473317 MS.gene012582:intron 45.0%
GGAGTAAGGATTCTTGGAGA+GGG + chr8.1:2474326-2474345 MS.gene012582:CDS 45.0%
GGATAGCAAGGTTACAAGTC+AGG - chr8.1:2475483-2475502 None:intergenic 45.0%
GGTCTAATCAGCTGTGTTAC+TGG + chr8.1:2475349-2475368 MS.gene012582:CDS 45.0%
GTCACGTAGGATTCACTTGT+AGG - chr8.1:2473475-2473494 None:intergenic 45.0%
GTGATATCACAGTCATCCTC+AGG - chr8.1:2476228-2476247 None:intergenic 45.0%
GTTCATTGCTTTCACTTGGC+TGG + chr8.1:2475316-2475335 MS.gene012582:CDS 45.0%
TCACTCCTGGATGCATTGTA+AGG - chr8.1:2475399-2475418 None:intergenic 45.0%
TCAGGGATGTGTGTTCACAA+AGG + chr8.1:2477070-2477089 MS.gene012582:intron 45.0%
TCCCATGCAATTCTCATGTC+TGG - chr8.1:2476387-2476406 None:intergenic 45.0%
TCTCGCCGAAAAGAGCAATT+AGG - chr8.1:2473817-2473836 None:intergenic 45.0%
TCTTGGAGAGGGAAAGTTCT+TGG + chr8.1:2474337-2474356 MS.gene012582:CDS 45.0%
TGAGAAAGTGAAGGCTAAGG+TGG + chr8.1:2476182-2476201 MS.gene012582:CDS 45.0%
TGCTAGCAACTTTGGACTTC+AGG + chr8.1:2476476-2476495 MS.gene012582:CDS 45.0%
TTGCTATCCGATAGCTTCAC+TGG + chr8.1:2475494-2475513 MS.gene012582:intron 45.0%
TTTATGAGGTAGGGCCTGTT+TGG - chr8.1:2475155-2475174 None:intergenic 45.0%
! AAAGACCCCACTTTGGAAGA+GGG + chr8.1:2474047-2474066 MS.gene012582:CDS 45.0%
! ATCAGCTGTGTTACTGGCAA+AGG + chr8.1:2475355-2475374 MS.gene012582:CDS 45.0%
! GCCAGATCATTTTCCCTTTC+AGG + chr8.1:2477169-2477188 MS.gene012582:CDS 45.0%
! GTGCTTGCCGAGATTTTAGA+CGG + chr8.1:2472923-2472942 MS.gene012582:CDS 45.0%
! TCAGAGGTGTACTGCTGTTA+AGG + chr8.1:2476122-2476141 MS.gene012582:CDS 45.0%
! TTCATGGATTGTAGTGGCAC+CGG - chr8.1:2475751-2475770 None:intergenic 45.0%
AGCACTTCTGGTGCAAAGGA+AGG + chr8.1:2475684-2475703 MS.gene012582:intron 50.0%
AGCTGTTGCAGCTCTTCACA+TGG + chr8.1:2475294-2475313 MS.gene012582:CDS 50.0%
AGCTTCACTGGTGGAGATAC+CGG + chr8.1:2475506-2475525 MS.gene012582:intron 50.0%
AGTTCAGCCCTCTTCCAAAG+TGG - chr8.1:2474057-2474076 None:intergenic 50.0%
ATAAATTCTGCCCCAGCTCG+TGG + chr8.1:2477146-2477165 MS.gene012582:CDS 50.0%
ATTGCATGGGAGGAGCCATT+TGG + chr8.1:2476396-2476415 MS.gene012582:CDS 50.0%
ATTGCTCCTGCACTCATTGC+TGG + chr8.1:2474782-2474801 MS.gene012582:CDS 50.0%
CACTTCTGGTGCAAAGGAAG+GGG + chr8.1:2475686-2475705 MS.gene012582:intron 50.0%
CCCATGGTATAAGAAGGGCT+TGG - chr8.1:2477507-2477526 None:intergenic 50.0%
CTATCCGATAGCTTCACTGG+TGG + chr8.1:2475497-2475516 MS.gene012582:intron 50.0%
GAGGGCTGAACTTCTTCACA+AGG + chr8.1:2474065-2474084 MS.gene012582:CDS 50.0%
GCACTTCTGGTGCAAAGGAA+GGG + chr8.1:2475685-2475704 MS.gene012582:intron 50.0%
GCCAAGCCCTTCTTATACCA+TGG + chr8.1:2477503-2477522 MS.gene012582:CDS 50.0%
GCTGTACGATGCTGCATTTC+AGG + chr8.1:2475270-2475289 MS.gene012582:intron 50.0%
GGCCAGACATGAGAATTGCA+TGG + chr8.1:2476382-2476401 MS.gene012582:CDS 50.0%
GTTCAGCCCTCTTCCAAAGT+GGG - chr8.1:2474056-2474075 None:intergenic 50.0%
TAAATTCTGCCCCAGCTCGT+GGG + chr8.1:2477147-2477166 MS.gene012582:CDS 50.0%
TTCAGCCCTCTTCCAAAGTG+GGG - chr8.1:2474055-2474074 None:intergenic 50.0%
! CAAAGACCCCACTTTGGAAG+AGG + chr8.1:2474046-2474065 MS.gene012582:CDS 50.0%
! CTGTGTTACTGGCAAAGGCT+CGG + chr8.1:2475360-2475379 MS.gene012582:CDS 50.0%
!! ACTAAGTGTTGGACCACCTG+AGG + chr8.1:2476209-2476228 MS.gene012582:CDS 50.0%
!!! CACTTGGCTGGTTTTCCCAA+AGG + chr8.1:2475328-2475347 MS.gene012582:CDS 50.0%
AAATGATCTGGCCCACGAGC+TGG - chr8.1:2477161-2477180 None:intergenic 55.0%
AATGATCTGGCCCACGAGCT+GGG - chr8.1:2477160-2477179 None:intergenic 55.0%
ACGGTCGATGGCCAGAATCA+CGG + chr8.1:2477234-2477253 MS.gene012582:intron 55.0%
ACTGGCAAAGGCTCGGAGAT+TGG + chr8.1:2475367-2475386 MS.gene012582:CDS 55.0%
CATGGGCAAAGACCCCACTT+TGG + chr8.1:2474040-2474059 MS.gene012582:CDS 55.0%
TGTGCTCAAGCCTCCAACTC+AGG + chr8.1:2474814-2474833 MS.gene012582:CDS 55.0%
ACGCTAGCTCGCCGTGATTC+TGG - chr8.1:2477248-2477267 None:intergenic 60.0%
ATGATCTGGCCCACGAGCTG+GGG - chr8.1:2477159-2477178 None:intergenic 60.0%
CCTCTTGGGAGCAAGCTGCA+TGG - chr8.1:2473978-2473997 None:intergenic 60.0%
CTGGTGCAAAGGAAGGGGCA+GGG + chr8.1:2475691-2475710 MS.gene012582:intron 60.0%
TCTGGTGCAAAGGAAGGGGC+AGG + chr8.1:2475690-2475709 MS.gene012582:intron 60.0%
! CCATGCAGCTTGCTCCCAAG+AGG + chr8.1:2473975-2473994 MS.gene012582:intron 60.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 2472908 2477530 2472908 ID=MS.gene012582
chr8.1 mRNA 2472908 2477530 2472908 ID=MS.gene012582.t1;Parent=MS.gene012582
chr8.1 exon 2472908 2473052 2472908 ID=MS.gene012582.t1.exon1;Parent=MS.gene012582.t1
chr8.1 CDS 2472908 2473052 2472908 ID=cds.MS.gene012582.t1;Parent=MS.gene012582.t1
chr8.1 exon 2473983 2474176 2473983 ID=MS.gene012582.t1.exon2;Parent=MS.gene012582.t1
chr8.1 CDS 2473983 2474176 2473983 ID=cds.MS.gene012582.t1;Parent=MS.gene012582.t1
chr8.1 exon 2474284 2474412 2474284 ID=MS.gene012582.t1.exon3;Parent=MS.gene012582.t1
chr8.1 CDS 2474284 2474412 2474284 ID=cds.MS.gene012582.t1;Parent=MS.gene012582.t1
chr8.1 exon 2474716 2474835 2474716 ID=MS.gene012582.t1.exon4;Parent=MS.gene012582.t1
chr8.1 CDS 2474716 2474835 2474716 ID=cds.MS.gene012582.t1;Parent=MS.gene012582.t1
chr8.1 exon 2475292 2475428 2475292 ID=MS.gene012582.t1.exon5;Parent=MS.gene012582.t1
chr8.1 CDS 2475292 2475428 2475292 ID=cds.MS.gene012582.t1;Parent=MS.gene012582.t1
chr8.1 exon 2475508 2475663 2475508 ID=MS.gene012582.t1.exon6;Parent=MS.gene012582.t1
chr8.1 CDS 2475508 2475663 2475508 ID=cds.MS.gene012582.t1;Parent=MS.gene012582.t1
chr8.1 exon 2476119 2476497 2476119 ID=MS.gene012582.t1.exon7;Parent=MS.gene012582.t1
chr8.1 CDS 2476119 2476497 2476119 ID=cds.MS.gene012582.t1;Parent=MS.gene012582.t1
chr8.1 exon 2477074 2477190 2477074 ID=MS.gene012582.t1.exon8;Parent=MS.gene012582.t1
chr8.1 CDS 2477074 2477190 2477074 ID=cds.MS.gene012582.t1;Parent=MS.gene012582.t1
chr8.1 exon 2477417 2477530 2477417 ID=MS.gene012582.t1.exon9;Parent=MS.gene012582.t1
chr8.1 CDS 2477417 2477530 2477417 ID=cds.MS.gene012582.t1;Parent=MS.gene012582.t1
Gene Sequence

>MS.gene012582

ATGGCTGCTACTGGAGTGCTTGCCGAGATTTTAGACGGAGATGTTTACAAATATTATGCTGATGGAGAATGGAAGAAATCTACCTCTGGAAAAAGTGTTGCTATCATCAACCCTACTACAAGAAAGCCTCAATACAAAGTTCAAGGTAATTTCCCTTTCTCTTTTGTTTTCAAGTCCTTTTATTTTAGTTACTTTGTATGATTCTTCATGTGGATGTGATCATGTGAGAATATGGACTTGCTACACCTAAAAAGGATGAACAAAAGCAACTATGTATGTTTACTGAATGCAAGACTTCAAAATTTTATAACAAGGATATATTCTGAAATTTCAACTTTTAATTTCACTGCTAGTAATTGTGAAAACACAGATACTGTTAAAAACGTTTAGGGAGGAGTGAATTTGCAGATTGGTCTTAGAAATTGTGAACAACGATCAAAATAATCTCTGAATTTTACGAATTGGCAAATACATCTCTGAAATAGTAACACATCAGTCAAAATGATCCATCCATTAACTTATGTTGTTAGAGGCTATAACTTGGTATGCTAAATGAACATGTAGCCTACAAGTGAATCCTACGTGACCAAAAACTTTTGTTGCACGTTAAATTCATGTATTTAATGCCAACTCTAGAGTTTCTACTTTGAGATCCAAGCATGTTAAATAAAATTACCTCGGAATTTTCGTATGCAATTTAGTTGTAGTCTGTAGATAATGTATTATTGATGTGAGATCTACATAGGGGGCTATATATTCAATTATAACATATGTTATAGACTCTAGCGACAGATGTTAACAAATGAACCGTTTTGATGATTCTTTACAATTTTGAAGATAGATTTGCTGATTCAAAAAACTCAAGGACTATTTCGACCGATGCTTACAGTTTATACGACTAATTTCCCTAATTGCTCTTTTCGGCGAGAAATGAAGTTATAAGGAATGGAGATGACATTTGAACACTATGTCATTCTTTTAATAACAGTAAAAAGAAAATAGACTGATAGATAAATATAACAGAAAACAACTATGTTCAATAGGTTCTAAGCCTCTAACAATGATCTCCATGCAGCTTGCTCCCAAGAGGAAGTTAATAAGGTTATGGATTCAGCAAAATCAGCACAAAAGTCATGGGCAAAGACCCCACTTTGGAAGAGGGCTGAACTTCTTCACAAGGCAGCTGCAATCCTCAAAGAACACAAAGCTGCAATTGCAGAATGCCTAGTCAAAGAAATAGCAAAGCCAGCAAAAGATGCAGTTACAGAGGTGCATATTGTGTTACAGTGTTATGTTGAATAAGTTAAGTGTTGCTTAGGACTATAATATCGAGAAATTATGAAAATGATTGGAATTTTTAAATTTTTTCAATGAAGGTTGTAAGATCTGGTGATTTGGTTTCTTACTGTGCTGAAGAAGGAGTAAGGATTCTTGGAGAGGGAAAGTTCTTGGTTTCAGATAGTTTTCCGGGAAATGAAAGGACCAAATATTGCCTCACTTCCAAGGTCTATTTCACTACATATGCTACTTCTTAATATTCAATTCATATGTTACTATATACTTCAATCATTTTAGAACTGGAAAATCAATAGGACAATGTACTTTATAAAGTCAATAAATTGGCGCGACACCAAAATCCTGAGATACATGCATTCAAGGGTGTAATATATCTGCATTGCATTCAATTATCTTAGTAACTTTTAATGACTTGTAAATTAAATGATCATGGTGAACTGTCATGTGTAATCTTATTGTTTTATTTTGCTTGGTTGATGATGTGGTCTAAGAAAGTTGCAATTGATTTTCAGATCCCATTAGGAGTGATCTTAGCCATTCCGCCTTTTAACTATCCAGTCAATCTTGCTGTCTCAAAAATTGCTCCTGCACTCATTGCTGGAAATTCTATTGTGCTCAAGCCTCCAACTCAGGTAATTTATATCCTTCATTGTGATACTCGTCAAAAACACTACATATGGGATCCATATTCTCATACTATCCACTTTCTTATGGCCCTGTTTCGATAAAAAGCTTAATTAAGAACTTATAGATTAAGCGCTTAACATATAAGTGTTTATGCATAAGTCATTTCTATAACAAATAAAATAAACTCAAACTATTTTCATATAGGCCATAAACTGTTTTCTTAATAAGCTGACAACAACTTATTGGCATGTCATAAGCGATTTCCATTAGCTCTCACAAACACTTGTGATTATAATTGTAAATAAGCTCAAATAAATCAATCCAAACAGGCCCTACCTCATAAAAGTTCTAGCTAATGTCTGAGCCGTTAAAAGAAACCAAAATAAAAAGTTTATGTCAGAATTTTTAAGTCTTATTTTCTTTACTGTTCCTTCTAATGGCTGTACGATGCTGCATTTCAGGGAGCTGTTGCAGCTCTTCACATGGTTCATTGCTTTCACTTGGCTGGTTTTCCCAAAGGTCTAATCAGCTGTGTTACTGGCAAAGGCTCGGAGATTGGTGACTTCCTTACAATGCATCCAGGAGTGAACTGTATAAGGTGATTATATATCTATATGATGCTGTGATAGTATATGCTACTTTTACCTATCCTGACTTGTAACCTTGCTATCCGATAGCTTCACTGGTGGAGATACCGGCATTGCAATTTCAAAGAAGGCAGGCATGATTCCGTTACAAATGGAATTGGGAGGAAAAGATGCTTGCATTGTACTTGAAGATGCTGACCTTGATTTGGTTGCTGCAAACATTATAAAAGGAGGTTTTTCATACAGGTGAATAACATGTCTCAATTAGCACTTCTGGTGCAAAGGAAGGGGCAGGGTTTGTCTTTCCATGCATTTACTTCATAAATATAACCGGTGCCACTACAATCCATGAATGTATTTAAATTGCAAACGCATCTCTATGTTTATCTTTTATTAGTAATTTTATAGACCAAACGACTAACGAAAGATACATTTGATGATCAAAATAACTAACAAAAGATACATTTGAGGACCAAACACTCTAAGAAAACTGACATCGCTTAACACATTCAAAGCCCAAAATGACCGTTTATTCATATAACTGCTAATACTAAGCTAGACACCTCAGCCAATTACATCATACGCTTCTTGATATGCATTATACAATATAAGATGAATGTTGCATGGTTAAAATTCTCATCTAGAAATTAAATGCATAGTCTCTTGATACTGAACTTTTTTTTTTATTTTTTCATGAAAAGTGGTCAGAGGTGTACTGCTGTTAAGGTTGTCTTGGTAATGGAATCAGTTGCTGATAGTTTGATTGAGAAAGTGAAGGCTAAGGTGGCAAAACTAAGTGTTGGACCACCTGAGGATGACTGTGATATCACCCCAGTTGTATCAGAATCATCAGCCAATTTCATTGAAGGCTTGGTGAATGATGCTAAACAGAAAGGAGCAACATTCTGCCAAGAATACAAGAGAGAAGGGAATCTCATTTGGCCTTTGCTATTGGATAATGTTAGGCCAGACATGAGAATTGCATGGGAGGAGCCATTTGGACCAGTTTTGCCTGTAATTAGGATCAATTCTGTTGAAGAAGGTATCCACCATTGTAATGCTAGCAACTTTGGACTTCAGGTAAAATCTTCAACCCTCTCACTTCAACAATCAATTACTCTTAGAAAGAAATAGTATAATGCCTTCTAATACTAAAATGAGTTTAGTTTTGGTACATATTGAGTGTAATTTTTTTTATACTAGCAACAATAGAGCACAAACGATCGTATGTGTGACTTTAGAACAAATTTTGCTTTAAGCCAAACGTTTTTACTGTGTGTTTGATTATGGAGTGACAAAAATTGATTTTGATTAACACCAAGTTAAAAATAAAGTGTTTTATGTTTAAATATATATCTTAGCTTCAACTTAGAATCGACTTTAGAGACAATCAATTCTACTGAAAAACATCCAAACATGTCAAAATCAGTTTTACACCTCTGAAATCATTTTTTTTTTAGGGAACCTCTGAAATCATTTTTAACACCTCCGAAATTAGAACCAAACATTAATTTAATGATATGACGATTAAGATTGACTGTGTAAAAAATCTTTGCATTTACCGTGCATGAATTAAATTCTAATAATTTATACTTGTGATGTGTTAGCATGCTAATAATAATTTGTATGAACAACATTGAACTTGAAATTGTTCAGGGATGTGTGTTCACAAAGGATATCAACAAAGCAATGATGATTAGTGATGCAATGGAATCAGGAACAGTTCAGATAAATTCTGCCCCAGCTCGTGGGCCAGATCATTTTCCCTTTCAGGTGAAACTTATAAAATCAATCCATTTTGTGTATATTTGGTATTACGGTCGATGGCCAGAATCACGGCGAGCTAGCGTGTATTTGCAAAAGCTCTAATTATGGCAAAATCACCGTAACATCAAATATGCACATGTTATTTATTTGATACAATTTCCAAAATTACAAAAACAACAAACAAAAAAATTATATATATGTCTCATACTATCAAATGTTTTATCATTCACAGGGTATAAAAGACAGTGGAATTGGATCACAGGGAATTACCAACAGCATAAACATGATGACAAAAATCAAAACTACCGTGATAAACTTGCCAAGCCCTTCTTATACCATGGGCTAA
Protein sequence

>MS.gene012582.t1

MAATGVLAEILDGDVYKYYADGEWKKSTSGKSVAIINPTTRKPQYKVQACSQEEVNKVMDSAKSAQKSWAKTPLWKRAELLHKAAAILKEHKAAIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVILAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGGDTGIAISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLIEKVKAKVAKLSVGPPEDDCDITPVVSESSANFIEGLVNDAKQKGATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTKDINKAMMISDAMESGTVQINSAPARGPDHFPFQGIKDSGIGSQGITNSINMMTKIKTTVINLPSPSYTMG