AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene042286

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene042286.t1 MTR_4g131180 99.129 459 4 0 1 459 1 459 0.0 938
MS.gene042286.t1 MTR_4g131180 99.129 459 4 0 1 459 1 459 0.0 936
MS.gene042286.t1 MTR_1g014320 89.760 459 47 0 1 459 1 459 0.0 869
MS.gene042286.t1 MTR_2g067660 31.409 433 281 6 22 446 53 477 4.34e-67 223
MS.gene042286.t1 MTR_3g078490 34.667 450 268 9 17 448 39 480 3.65e-59 203
MS.gene042286.t1 MTR_3g078550 33.853 449 273 9 17 448 9 450 3.04e-58 199
MS.gene042286.t1 MTR_8g064170 31.808 437 279 8 21 446 66 494 1.72e-56 196
MS.gene042286.t1 MTR_4g106510 31.532 444 286 7 17 446 9 448 4.18e-53 186
MS.gene042286.t1 MTR_3g078550 34.129 419 252 9 47 448 9 420 4.26e-52 182
MS.gene042286.t1 MTR_8g083530 27.948 458 300 8 17 458 24 467 2.12e-51 181
MS.gene042286.t1 MTR_6g086340 29.478 441 292 8 17 446 21 453 7.27e-50 177
MS.gene042286.t1 MTR_4g107040 28.475 446 290 8 17 446 65 497 2.91e-48 174
MS.gene042286.t1 MTR_3g078170 29.748 437 288 9 21 446 67 495 3.42e-48 173
MS.gene042286.t1 MTR_6g086300 28.665 457 291 9 17 454 23 463 4.97e-48 172
MS.gene042286.t1 MTR_6g086300 28.665 457 291 9 17 454 23 463 4.97e-48 172
MS.gene042286.t1 MTR_2g009750 29.545 440 281 11 22 446 20 445 2.99e-44 162
MS.gene042286.t1 MTR_2g009750 29.545 440 281 11 22 446 21 446 3.16e-44 162
MS.gene042286.t1 MTR_2g009750 29.478 441 281 11 22 446 21 447 3.70e-44 162
MS.gene042286.t1 MTR_2g034160 29.478 441 274 12 29 446 62 488 1.14e-43 162
MS.gene042286.t1 MTR_4g093170 27.626 438 293 9 22 446 48 474 2.46e-42 157
MS.gene042286.t1 MTR_8g083520 27.111 450 281 9 17 458 15 425 8.94e-42 154
MS.gene042286.t1 MTR_8g064170 28.833 437 260 9 21 446 66 462 5.05e-41 153
MS.gene042286.t1 MTR_3g078490 35.398 339 200 8 17 343 9 340 1.11e-40 149
MS.gene042286.t1 MTR_3g078170 29.899 398 260 9 21 407 67 456 1.60e-39 148
MS.gene042286.t1 MTR_8g083520 29.747 316 186 5 148 458 61 345 9.45e-35 134
MS.gene042286.t1 MTR_3g078170 30.599 317 205 6 21 330 67 375 2.15e-32 128
MS.gene042286.t1 MTR_3g078170 30.599 317 205 6 21 330 67 375 2.79e-32 128
MS.gene042286.t1 MTR_1222s0010 31.129 363 223 13 56 407 6 352 4.85e-31 127
MS.gene042286.t1 MTR_1690s0010 27.405 343 236 6 17 353 10 345 2.34e-30 120
MS.gene042286.t1 MTR_1399s0020 29.508 305 161 6 160 458 55 311 2.53e-30 120
MS.gene042286.t1 MTR_8g083530 26.829 328 215 5 17 332 24 338 2.54e-30 121
MS.gene042286.t1 MTR_2g042330 24.344 419 295 11 19 426 25 432 1.66e-29 121
MS.gene042286.t1 MTR_2g097950 29.747 316 198 10 158 458 120 426 1.12e-24 107
MS.gene042286.t1 MTR_8g094600 25.616 406 274 11 53 448 74 461 3.30e-23 102
MS.gene042286.t1 MTR_3g088150 25.598 418 285 11 39 446 7 408 2.03e-22 100
MS.gene042286.t1 MTR_1g029840 24.882 422 292 10 46 458 14 419 6.12e-22 98.6
MS.gene042286.t1 MTR_1g029840 25.175 429 294 11 41 458 7 419 7.78e-22 98.2
MS.gene042286.t1 MTR_8g076480 25.806 403 273 10 53 446 14 399 1.72e-20 94.4
MS.gene042286.t1 MTR_4g065040 28.618 304 196 11 158 448 105 400 2.56e-16 81.6
MS.gene042286.t1 MTR_1314s0010 26.774 310 193 8 158 446 1 297 2.77e-16 80.5
MS.gene042286.t1 MTR_2g097950 24.582 419 250 13 44 448 14 380 3.14e-16 81.3
MS.gene042286.t1 MTR_4g107940 25.070 355 232 13 22 360 57 393 2.78e-13 72.4
MS.gene042286.t1 MTR_4g107940 25.070 355 232 13 22 360 57 393 3.88e-13 71.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene042286.t1 AT2G24270 90.196 459 45 0 1 459 41 499 0.0 871
MS.gene042286.t1 AT2G24270 90.196 459 45 0 1 459 1 459 0.0 870
MS.gene042286.t1 AT2G24270 90.196 459 45 0 1 459 1 459 0.0 870
MS.gene042286.t1 AT2G24270 90.196 459 45 0 1 459 1 459 0.0 870
MS.gene042286.t1 AT1G74920 35.570 447 264 9 17 446 9 448 2.69e-68 226
MS.gene042286.t1 AT1G74920 35.347 447 260 10 17 446 9 443 4.47e-66 220
MS.gene042286.t1 AT1G79440 31.409 433 281 5 22 446 59 483 2.00e-61 209
MS.gene042286.t1 AT3G48170 31.166 446 285 9 17 446 9 448 1.42e-59 203
MS.gene042286.t1 AT3G48000 30.317 442 279 9 21 446 63 491 7.66e-54 189
MS.gene042286.t1 AT3G24503 29.478 441 293 7 17 446 21 454 5.07e-53 186
MS.gene042286.t1 AT1G23800 30.734 436 283 8 22 446 60 487 7.24e-52 183
MS.gene042286.t1 AT3G66658 28.510 463 303 12 3 446 35 488 6.02e-43 159
MS.gene042286.t1 AT3G66658 28.510 463 303 12 3 446 35 488 1.28e-42 159
MS.gene042286.t1 AT2G14170 28.767 438 288 10 22 446 11 437 7.04e-42 155
MS.gene042286.t1 AT2G14170 28.767 438 288 10 22 446 120 546 3.60e-41 155
MS.gene042286.t1 AT2G14170 28.767 438 288 10 22 446 120 546 4.29e-41 155
MS.gene042286.t1 AT1G23800 30.696 316 204 6 22 330 60 367 8.32e-34 131
MS.gene042286.t1 AT1G54100 25.059 427 284 10 19 427 24 432 8.30e-33 130
MS.gene042286.t1 AT1G54100 25.059 427 284 10 19 427 24 432 8.30e-33 130
MS.gene042286.t1 AT1G44170 25.000 416 295 12 51 458 9 415 2.83e-22 99.8
MS.gene042286.t1 AT1G44170 25.000 416 295 12 51 458 9 415 2.83e-22 99.8
MS.gene042286.t1 AT1G44170 26.384 307 217 7 158 458 49 352 6.08e-22 98.2
MS.gene042286.t1 AT4G34240 24.020 408 274 10 53 446 65 450 2.03e-20 94.4
MS.gene042286.t1 AT4G34240 24.020 408 274 10 53 446 80 465 2.09e-20 94.4
MS.gene042286.t1 AT4G34240 26.531 294 208 5 158 446 33 323 1.97e-18 87.4
MS.gene042286.t1 AT4G36250 26.578 301 202 9 158 446 108 401 1.86e-17 85.1
MS.gene042286.t1 AT5G62530 23.714 350 235 14 19 353 56 388 2.02e-14 75.9
MS.gene042286.t1 AT4G34240 24.127 315 204 9 53 354 80 372 5.21e-14 73.9

Find 124 sgRNAs with CRISPR-Local

Find 253 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCCTTCTCTCTTGTATTCT+TGG 0.177591 8.2:-3993506 None:intergenic
CACCAAGCCTTCAATGAAAT+TGG 0.219619 8.2:-3993451 None:intergenic
CTTGGAAGTGAGGCAATATT+TGG 0.238356 8.2:-3991570 None:intergenic
GTTGCTGCAAACATTATAAA+AGG 0.248305 8.2:+3992806 MS.gene042286:CDS
TCTCATTTGGCCTTTGCTAT+TGG 0.249553 8.2:+3993530 MS.gene042286:CDS
CTCCCAAGAGGAAGTTAATA+AGG 0.272304 8.2:+3991167 MS.gene042286:CDS
GGTCTAATCAGCTGTGTTAC+TGG 0.308486 8.2:+3992529 MS.gene042286:CDS
TGCTAGCAACTTTGGACTTC+AGG 0.313262 8.2:+3993656 MS.gene042286:CDS
TATTGAGGCTTTCTTGTAGT+AGG 0.325145 8.2:-3990233 None:intergenic
ACAGAATTGATCCTAATTAC+AGG 0.326513 8.2:-3993609 None:intergenic
GATTCCGTTACAAATGGAAT+TGG 0.329253 8.2:+3992736 MS.gene042286:CDS
TATTTGGTCCTTTCATTTCC+CGG 0.335147 8.2:-3991554 None:intergenic
CTTTGCTATTGGATAATGTT+AGG 0.338290 8.2:+3993541 MS.gene042286:CDS
TTGCAGCTTTGTGTTCTTTG+AGG 0.338729 8.2:-3991278 None:intergenic
ATTGCTCCTGCACTCATTGC+TGG 0.338801 8.2:+3991962 MS.gene042286:CDS
GAAGAAGGAGTAAGGATTCT+TGG 0.343223 8.2:+3991500 MS.gene042286:CDS
TCTTGGAGAGGGAAAGTTCT+TGG 0.345028 8.2:+3991517 MS.gene042286:CDS
GTTCATTGCTTTCACTTGGC+TGG 0.348410 8.2:+3992496 MS.gene042286:CDS
AGAGGAAGTTAATAAGGTTA+TGG 0.352924 8.2:+3991173 MS.gene042286:CDS
TGAAGATGCTGACCTTGATT+TGG 0.358975 8.2:+3992784 MS.gene042286:CDS
AACACAGCTGATTAGACCTT+TGG 0.359110 8.2:-3992524 None:intergenic
CATTGTAATGCTAGCAACTT+TGG 0.359882 8.2:+3993648 MS.gene042286:CDS
ATCCAGGAGTGAACTGTATA+AGG 0.361239 8.2:+3992587 MS.gene042286:CDS
ATCCTAATTACAGGCAAAAC+TGG 0.370576 8.2:-3993600 None:intergenic
TCCCATGCAATTCTCATGTC+TGG 0.371621 8.2:-3993564 None:intergenic
CATGGTTCATTGCTTTCACT+TGG 0.375400 8.2:+3992492 MS.gene042286:CDS
AGATTGACTGGATAGTTAAA+AGG 0.381527 8.2:-3991926 None:intergenic
AGCCAATTTCATTGAAGGCT+TGG 0.386673 8.2:+3993449 MS.gene042286:CDS
AAATGATCTGGCCCACGAGC+TGG 0.391227 8.2:-3994338 None:intergenic
ATTAGTGATGCAATGGAATC+AGG 0.394652 8.2:+3994293 MS.gene042286:CDS
ATGGCTAAGATCACTCCTAA+TGG 0.394955 8.2:-3991899 None:intergenic
TTTATAAGTTTCACCTGAAA+GGG 0.396189 8.2:-3994362 None:intergenic
TAACCTTATTAACTTCCTCT+TGG 0.406814 8.2:-3991170 None:intergenic
GGAATCAGTTGCTGATAGTT+TGG 0.407889 8.2:+3993338 MS.gene042286:CDS
TCATCAGCCAATTTCATTGA+AGG 0.421085 8.2:+3993444 MS.gene042286:CDS
GGTTGTAAGATCTGGTGATT+TGG 0.422138 8.2:+3991463 MS.gene042286:intron
TACTGCTGTTAAGGTTGTCT+TGG 0.427731 8.2:+3993311 MS.gene042286:CDS
GCTGATGATTCTGATACAAC+TGG 0.428644 8.2:-3993429 None:intergenic
ATTGCATGGGAGGAGCCATT+TGG 0.428782 8.2:+3993576 MS.gene042286:CDS
TCAGAGGTGTACTGCTGTTA+AGG 0.430225 8.2:+3993302 MS.gene042286:CDS
TCAATGAAGGTTGTAAGATC+TGG 0.431004 8.2:+3991455 MS.gene042286:intron
AACCTTATTAACTTCCTCTT+GGG 0.435727 8.2:-3991169 None:intergenic
AGGATATAAATTACCTGAGT+TGG 0.437333 8.2:-3992007 None:intergenic
AGCTTCACTGGTGGAGATAC+CGG 0.437992 8.2:+3992686 MS.gene042286:intron
AGAGAGAAGGGAATCTCATT+TGG 0.440505 8.2:+3993517 MS.gene042286:CDS
AATGATCTGGCCCACGAGCT+GGG 0.441052 8.2:-3994337 None:intergenic
ACTGGCAAAGGCTCGGAGAT+TGG 0.449931 8.2:+3992547 MS.gene042286:CDS
TGGCTAAGATCACTCCTAAT+GGG 0.455898 8.2:-3991898 None:intergenic
CGGCATTGCAATTTCAAAGA+AGG 0.458206 8.2:+3992706 MS.gene042286:CDS
ACACAGCTGATTAGACCTTT+GGG 0.458219 8.2:-3992523 None:intergenic
CTTCTTTGAAATTGCAATGC+CGG 0.461936 8.2:-3992705 None:intergenic
ATTGAGGCTTTCTTGTAGTA+GGG 0.466187 8.2:-3990232 None:intergenic
TTACCTTGAACTTTGTATTG+AGG 0.467120 8.2:-3990248 None:intergenic
ATTCCGTTACAAATGGAATT+GGG 0.467485 8.2:+3992737 MS.gene042286:CDS
ACCTGAAAGGGAAAATGATC+TGG 0.469238 8.2:-3994350 None:intergenic
AAGCCTCAATACAAAGTTCA+AGG 0.469357 8.2:+3990245 MS.gene042286:CDS
AATATTATGCTGATGGAGAA+TGG 0.471141 8.2:+3990171 MS.gene042286:CDS
GTTTCTTACTGTGCTGAAGA+AGG 0.471237 8.2:+3991485 MS.gene042286:CDS
AGGATCAATTCTGTTGAAGA+AGG 0.476795 8.2:+3993618 MS.gene042286:CDS
AACATCTCCGTCTAAAATCT+CGG 0.486907 8.2:-3990144 None:intergenic
ACAGGCAAAACTGGTCCAAA+TGG 0.487090 8.2:-3993591 None:intergenic
TTTGAGACAGCAAGATTGAC+TGG 0.493697 8.2:-3991938 None:intergenic
ATATAAATTACCTGAGTTGG+AGG 0.495354 8.2:-3992004 None:intergenic
TCACTCCTGGATGCATTGTA+AGG 0.496013 8.2:-3992576 None:intergenic
CAAAATCAGCACAAAAGTCA+TGG 0.497875 8.2:+3991202 MS.gene042286:CDS
TGTTAAGGTTGTCTTGGTAA+TGG 0.498386 8.2:+3993317 MS.gene042286:CDS
CACCTTATACAGTTCACTCC+TGG 0.499695 8.2:-3992589 None:intergenic
TTGCTATCCGATAGCTTCAC+TGG 0.502581 8.2:+3992674 MS.gene042286:intron
AGCTGTTGCAGCTCTTCACA+TGG 0.503024 8.2:+3992474 MS.gene042286:CDS
GGAGTAAGGATTCTTGGAGA+GGG 0.504125 8.2:+3991506 MS.gene042286:CDS
CAAAGACCCCACTTTGGAAG+AGG 0.506615 8.2:+3991226 MS.gene042286:CDS
ATCAGCTGTGTTACTGGCAA+AGG 0.512241 8.2:+3992535 MS.gene042286:CDS
TGTGCTCAAGCCTCCAACTC+AGG 0.519656 8.2:+3991994 MS.gene042286:CDS
AGGAGTAAGGATTCTTGGAG+AGG 0.519697 8.2:+3991505 MS.gene042286:CDS
GTTTACAAATATTATGCTGA+TGG 0.519827 8.2:+3990164 MS.gene042286:CDS
AGGCATGATTCCGTTACAAA+TGG 0.524495 8.2:+3992730 MS.gene042286:CDS
GAATGGAAGAAATCTACCTC+TGG 0.525185 8.2:+3990188 MS.gene042286:CDS
GTGATATCACAGTCATCCTC+AGG 0.527858 8.2:-3993405 None:intergenic
CCTCCCAATTCCATTTGTAA+CGG 0.528245 8.2:-3992740 None:intergenic
GCTTTGCTATTTCTTTGACT+AGG 0.532020 8.2:-3991311 None:intergenic
GAATTTCCAGCAATGAGTGC+AGG 0.537751 8.2:-3991968 None:intergenic
ACTGTGCTGAAGAAGGAGTA+AGG 0.539338 8.2:+3991492 MS.gene042286:CDS
ATAAATTCTGCCCCAGCTCG+TGG 0.539359 8.2:+3994326 MS.gene042286:CDS
TGCCAAGAATACAAGAGAGA+AGG 0.540006 8.2:+3993504 MS.gene042286:CDS
GCCAAGAATACAAGAGAGAA+GGG 0.542461 8.2:+3993505 MS.gene042286:CDS
GTGAATGATGCTAAACAGAA+AGG 0.552242 8.2:+3993471 MS.gene042286:CDS
ATTGCAATTTCAAAGAAGGC+AGG 0.554951 8.2:+3992710 MS.gene042286:CDS
CTGTGTTACTGGCAAAGGCT+CGG 0.559016 8.2:+3992540 MS.gene042286:CDS
CAAATATTGCCTCACTTCCA+AGG 0.562000 8.2:+3991571 MS.gene042286:CDS
GCTGCAAACATTATAAAAGG+AGG 0.564563 8.2:+3992809 MS.gene042286:CDS
TGAAATAGACCTTGGAAGTG+AGG 0.565780 8.2:-3991580 None:intergenic
TGTTTGCAGCAACCAAATCA+AGG 0.571187 8.2:-3992796 None:intergenic
ATGATCTGGCCCACGAGCTG+GGG 0.571612 8.2:-3994336 None:intergenic
GTTCAGCCCTCTTCCAAAGT+GGG 0.573357 8.2:-3991233 None:intergenic
GACTTCCTTACAATGCATCC+AGG 0.575105 8.2:+3992571 MS.gene042286:CDS
CATGGGCAAAGACCCCACTT+TGG 0.577477 8.2:+3991220 MS.gene042286:CDS
GGCCAGACATGAGAATTGCA+TGG 0.578690 8.2:+3993562 MS.gene042286:CDS
CTGATGATTCTGATACAACT+GGG 0.582007 8.2:-3993428 None:intergenic
GGTTGAGAAAGTGAAGGCTA+AGG 0.585982 8.2:+3993359 MS.gene042286:CDS
AAAATCAGCACAAAAGTCAT+GGG 0.588574 8.2:+3991203 MS.gene042286:CDS
AAAGACCCCACTTTGGAAGA+GGG 0.592379 8.2:+3991227 MS.gene042286:CDS
AAGGTGGCAAAACTAAGTGT+TGG 0.592797 8.2:+3993378 MS.gene042286:CDS
TGGATAGTTAAAAGGCGGAA+TGG 0.594322 8.2:-3991918 None:intergenic
TAAATTCTGCCCCAGCTCGT+GGG 0.599729 8.2:+3994327 MS.gene042286:CDS
AGTTCAGCCCTCTTCCAAAG+TGG 0.601662 8.2:-3991234 None:intergenic
GCCAGACATGAGAATTGCAT+GGG 0.604840 8.2:+3993563 MS.gene042286:CDS
AATGATGATTAGTGATGCAA+TGG 0.607091 8.2:+3994286 MS.gene042286:CDS
AGTTGCTAGCATTACAATGG+TGG 0.608323 8.2:-3993644 None:intergenic
AGCAAAAGATGCAGTTACAG+AGG 0.611642 8.2:+3991335 MS.gene042286:CDS
TGAGAAAGTGAAGGCTAAGG+TGG 0.619750 8.2:+3993362 MS.gene042286:CDS
AGACATGAGAATTGCATGGG+AGG 0.621616 8.2:+3993566 MS.gene042286:CDS
TTCAGCCCTCTTCCAAAGTG+GGG 0.625906 8.2:-3991232 None:intergenic
CCATGCAGCTTGCTCCCAAG+AGG 0.628360 8.2:+3991155 MS.gene042286:intron
CCGTTACAAATGGAATTGGG+AGG 0.629301 8.2:+3992740 MS.gene042286:CDS
TAGTTTGGTTGAGAAAGTGA+AGG 0.632684 8.2:+3993353 MS.gene042286:CDS
CAAAGTTGCTAGCATTACAA+TGG 0.639762 8.2:-3993647 None:intergenic
ACTAAGTGTTGGACCACCTG+AGG 0.649624 8.2:+3993389 MS.gene042286:CDS
GAGGGCTGAACTTCTTCACA+AGG 0.649776 8.2:+3991245 MS.gene042286:CDS
CTATCCGATAGCTTCACTGG+TGG 0.653530 8.2:+3992677 MS.gene042286:intron
TCAGGGATGTGTGTTCACAA+AGG 0.663222 8.2:+3994250 MS.gene042286:intron
TTGACTGGATAGTTAAAAGG+CGG 0.663722 8.2:-3991923 None:intergenic
CTAACATTATCCAATAGCAA+AGG 0.679429 8.2:-3993540 None:intergenic
ATATCACAGTCATCCTCAGG+TGG 0.693050 8.2:-3993402 None:intergenic
TGATGATTCTGATACAACTG+GGG 0.745364 8.2:-3993427 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAATTTTTTTATGAAAAG+TGG + chr8.2:3993279-3993298 MS.gene042286:intron 10.0%
!!! TTTTTAAATTTTTTCAATGA+AGG + chr8.2:3991442-3991461 MS.gene042286:intron 10.0%
!! ACTTTATAAAGTCAATAAAT+TGG + chr8.2:3991688-3991707 MS.gene042286:intron 15.0%
!! ATTTACTTCATAAATATAAC+CGG + chr8.2:3992909-3992928 MS.gene042286:intron 15.0%
!! CATATCATTAAATTAATGTT+TGG - chr8.2:3994101-3994120 None:intergenic 15.0%
!! TAAAAAAAAAATGATTTCAG+AGG - chr8.2:3994037-3994056 None:intergenic 15.0%
!! TACAAAGTAACTAAAATAAA+AGG - chr8.2:3990300-3990319 None:intergenic 15.0%
!!! AAAACACTTTATTTTTAACT+TGG - chr8.2:3993918-3993937 None:intergenic 15.0%
!!! CTGAAATCATTTTTTTTTTA+GGG + chr8.2:3994037-3994056 MS.gene042286:intron 15.0%
!!! TCTGAAATCATTTTTTTTTT+AGG + chr8.2:3994036-3994055 MS.gene042286:intron 15.0%
!!! TTTATTTTGGTTTCTTTTAA+CGG - chr8.2:3992378-3992397 None:intergenic 15.0%
!! ACTTGTAAATTAAATGATCA+TGG + chr8.2:3991794-3991813 MS.gene042286:intron 20.0%
!! ATATTTATGAAGTAAATGCA+TGG - chr8.2:3992906-3992925 None:intergenic 20.0%
!! ATTAGAATTTAATTCATGCA+CGG - chr8.2:3994162-3994181 None:intergenic 20.0%
!! ATTGTAAAGAATCATCAAAA+CGG - chr8.2:3990898-3990917 None:intergenic 20.0%
!! CATGTTAAATAAAATTACCT+CGG + chr8.2:3990780-3990799 MS.gene042286:intron 20.0%
!! CTTATTAAGAAAACAGTTTA+TGG - chr8.2:3992219-3992238 None:intergenic 20.0%
!! TTAGCAGTTATATGAATAAA+CGG - chr8.2:3993126-3993145 None:intergenic 20.0%
!! TTGCAATTTAAATACATTCA+TGG - chr8.2:3992947-3992966 None:intergenic 20.0%
!!! AAACTCATTTTAGTATTAGA+AGG - chr8.2:3993742-3993761 None:intergenic 20.0%
!!! AACTCAAACTATTTTCATAT+AGG + chr8.2:3992193-3992212 MS.gene042286:intron 20.0%
!!! CTGACATAAACTTTTTATTT+TGG - chr8.2:3992391-3992410 None:intergenic 20.0%
!!! GACTTCAAAATTTTATAACA+AGG + chr8.2:3990414-3990433 MS.gene042286:intron 20.0%
!!! GTAATTTTATTTAACATGCT+TGG - chr8.2:3990778-3990797 None:intergenic 20.0%
!!! TACTAAAATGAGTTTAGTTT+TGG + chr8.2:3993747-3993766 MS.gene042286:intron 20.0%
!!! TCTTATTGTTTTATTTTGCT+TGG + chr8.2:3991834-3991853 MS.gene042286:intron 20.0%
!!! TTAATGTTTGGTTCTAATTT+CGG - chr8.2:3994089-3994108 None:intergenic 20.0%
! AATATAAGATGAATGTTGCA+TGG + chr8.2:3993202-3993221 MS.gene042286:intron 25.0%
! ACTAACAAAAGATACATTTG+AGG + chr8.2:3993046-3993065 MS.gene042286:intron 25.0%
! ACTTGAAAACAAAAGAGAAA+GGG - chr8.2:3990277-3990296 None:intergenic 25.0%
! AGAAAACAACTATGTTCAAT+AGG + chr8.2:3991109-3991128 MS.gene042286:intron 25.0%
! AGAAATGAAGTTATAAGGAA+TGG + chr8.2:3991014-3991033 MS.gene042286:intron 25.0%
! AGATACTGTTAAAAACGTTT+AGG + chr8.2:3990490-3990509 MS.gene042286:intron 25.0%
! ATTGAACTTGAAATTGTTCA+GGG + chr8.2:3994233-3994252 MS.gene042286:intron 25.0%
! CGAGAAATTATGAAAATGAT+TGG + chr8.2:3991417-3991436 MS.gene042286:intron 25.0%
! GATACTGTTAAAAACGTTTA+GGG + chr8.2:3990491-3990510 MS.gene042286:intron 25.0%
! GTTTACAAATATTATGCTGA+TGG + chr8.2:3990164-3990183 MS.gene042286:CDS 25.0%
! TAACAACATAAGTTAATGGA+TGG - chr8.2:3990631-3990650 None:intergenic 25.0%
! TCAAATAAATCAATCCAAAC+AGG + chr8.2:3992318-3992337 MS.gene042286:intron 25.0%
!! AATCTCTGAATTTTACGAAT+TGG + chr8.2:3990564-3990583 MS.gene042286:intron 25.0%
!! ATATGAATAAACGGTCATTT+TGG - chr8.2:3993117-3993136 None:intergenic 25.0%
!! ATTAAGCTTTTTATCGAAAC+AGG - chr8.2:3992102-3992121 None:intergenic 25.0%
!! TTAAGCTTTTTATCGAAACA+GGG - chr8.2:3992101-3992120 None:intergenic 25.0%
!! TTTAGAACTGGAAAATCAAT+AGG + chr8.2:3991658-3991677 MS.gene042286:intron 25.0%
!! TTTTACTGTGTGTTTGATTA+TGG + chr8.2:3993865-3993884 MS.gene042286:intron 25.0%
!!! AAAACTGATTTTGACATGTT+TGG - chr8.2:3994011-3994030 None:intergenic 25.0%
!!! TACTTCAATCATTTTAGAAC+TGG + chr8.2:3991646-3991665 MS.gene042286:intron 25.0%
!!! TATGAATAAACGGTCATTTT+GGG - chr8.2:3993116-3993135 None:intergenic 25.0%
AAAATCAGCACAAAAGTCAT+GGG + chr8.2:3991203-3991222 MS.gene042286:CDS 30.0%
AAACACACAGTAAAAACGTT+TGG - chr8.2:3993860-3993879 None:intergenic 30.0%
AACCTTATTAACTTCCTCTT+GGG - chr8.2:3991172-3991191 None:intergenic 30.0%
AAGTGGATAGTATGAGAATA+TGG - chr8.2:3992070-3992089 None:intergenic 30.0%
AATATTATGCTGATGGAGAA+TGG + chr8.2:3990171-3990190 MS.gene042286:CDS 30.0%
AATGATGATTAGTGATGCAA+TGG + chr8.2:3994286-3994305 MS.gene042286:CDS 30.0%
AATTGATTGTTGAAGTGAGA+GGG - chr8.2:3993694-3993713 None:intergenic 30.0%
ACAGAATTGATCCTAATTAC+AGG - chr8.2:3993612-3993631 None:intergenic 30.0%
ACTTTGTATGATTCTTCATG+TGG + chr8.2:3990312-3990331 MS.gene042286:intron 30.0%
AGAGGAAGTTAATAAGGTTA+TGG + chr8.2:3991173-3991192 MS.gene042286:CDS 30.0%
AGATTGACTGGATAGTTAAA+AGG - chr8.2:3991929-3991948 None:intergenic 30.0%
AGGATATAAATTACCTGAGT+TGG - chr8.2:3992010-3992029 None:intergenic 30.0%
ATAAGCTGACAACAACTTAT+TGG + chr8.2:3992234-3992253 MS.gene042286:intron 30.0%
ATATGTAGTGAAATAGACCT+TGG - chr8.2:3991591-3991610 None:intergenic 30.0%
ATTCCGTTACAAATGGAATT+GGG + chr8.2:3992737-3992756 MS.gene042286:CDS 30.0%
ATTGATGTGAGATCTACATA+GGG + chr8.2:3990846-3990865 MS.gene042286:intron 30.0%
CATTGAACTTGAAATTGTTC+AGG + chr8.2:3994232-3994251 MS.gene042286:intron 30.0%
CCATTAACTTATGTTGTTAG+AGG + chr8.2:3990632-3990651 MS.gene042286:intron 30.0%
CCTCTAACAACATAAGTTAA+TGG - chr8.2:3990635-3990654 None:intergenic 30.0%
CTAACATTATCCAATAGCAA+AGG - chr8.2:3993543-3993562 None:intergenic 30.0%
GACTTGAAAACAAAAGAGAA+AGG - chr8.2:3990278-3990297 None:intergenic 30.0%
GGTGTTAAAAATGATTTCAG+AGG - chr8.2:3994065-3994084 None:intergenic 30.0%
GTTGCTGCAAACATTATAAA+AGG + chr8.2:3992806-3992825 MS.gene042286:CDS 30.0%
TAACCTTATTAACTTCCTCT+TGG - chr8.2:3991173-3991192 None:intergenic 30.0%
TAATTGATTGTTGAAGTGAG+AGG - chr8.2:3993695-3993714 None:intergenic 30.0%
TATTGATGTGAGATCTACAT+AGG + chr8.2:3990845-3990864 MS.gene042286:intron 30.0%
TCATACTATCCACTTTCTTA+TGG + chr8.2:3992075-3992094 MS.gene042286:intron 30.0%
TCGTCAAAAACACTACATAT+GGG + chr8.2:3992042-3992061 MS.gene042286:intron 30.0%
TTACCTTGAACTTTGTATTG+AGG - chr8.2:3990251-3990270 None:intergenic 30.0%
TTCTTTACTGTTCCTTCTAA+TGG + chr8.2:3992428-3992447 MS.gene042286:intron 30.0%
! AATACATTCATGGATTGTAG+TGG - chr8.2:3992937-3992956 None:intergenic 30.0%
! ATATAAATTACCTGAGTTGG+AGG - chr8.2:3992007-3992026 None:intergenic 30.0%
! ATTTCCCTAATTGCTCTTTT+CGG + chr8.2:3990989-3991008 MS.gene042286:intron 30.0%
! CATTAGCTAGAACTTTTATG+AGG - chr8.2:3992349-3992368 None:intergenic 30.0%
! TAAAAGGAGGTTTTTCATAC+AGG + chr8.2:3992822-3992841 MS.gene042286:CDS 30.0%
! TAACGTGCAACAAAAGTTTT+TGG - chr8.2:3990711-3990730 None:intergenic 30.0%
! TGCTTTTGTTCATCCTTTTT+AGG - chr8.2:3990370-3990389 None:intergenic 30.0%
! TTTTTATGAAAAGTGGTCAG+AGG + chr8.2:3993286-3993305 MS.gene042286:intron 30.0%
!! ATTGATTTTCAGATCCCATT+AGG + chr8.2:3991884-3991903 MS.gene042286:intron 30.0%
!! CTTTGCTATTGGATAATGTT+AGG + chr8.2:3993541-3993560 MS.gene042286:CDS 30.0%
!! GAATAAGTTAAGTGTTGCTT+AGG + chr8.2:3991384-3991403 MS.gene042286:intron 30.0%
!! TTGCTGATTCAAAAAACTCA+AGG + chr8.2:3990931-3990950 MS.gene042286:intron 30.0%
AAGCCTCAATACAAAGTTCA+AGG + chr8.2:3990245-3990264 MS.gene042286:CDS 35.0%
AATTGCATACGAAAATTCCG+AGG - chr8.2:3990800-3990819 None:intergenic 35.0%
ACTGTTAAAAACGTTTAGGG+AGG + chr8.2:3990494-3990513 MS.gene042286:intron 35.0%
AGGATCAATTCTGTTGAAGA+AGG + chr8.2:3993618-3993637 MS.gene042286:CDS 35.0%
ATCCTAATTACAGGCAAAAC+TGG - chr8.2:3993603-3993622 None:intergenic 35.0%
ATTAGTGATGCAATGGAATC+AGG + chr8.2:3994293-3994312 MS.gene042286:CDS 35.0%
ATTGAGGCTTTCTTGTAGTA+GGG - chr8.2:3990235-3990254 None:intergenic 35.0%
ATTGCAATTTCAAAGAAGGC+AGG + chr8.2:3992710-3992729 MS.gene042286:CDS 35.0%
CAAAATCAGCACAAAAGTCA+TGG + chr8.2:3991202-3991221 MS.gene042286:CDS 35.0%
CAAAGTTGCTAGCATTACAA+TGG - chr8.2:3993650-3993669 None:intergenic 35.0%
CATTGTAATGCTAGCAACTT+TGG + chr8.2:3993648-3993667 MS.gene042286:CDS 35.0%
CTCGTCAAAAACACTACATA+TGG + chr8.2:3992041-3992060 MS.gene042286:intron 35.0%
CTGATGATTCTGATACAACT+GGG - chr8.2:3993431-3993450 None:intergenic 35.0%
GATGTGATCATGTGAGAATA+TGG + chr8.2:3990334-3990353 MS.gene042286:intron 35.0%
GATTCCGTTACAAATGGAAT+TGG + chr8.2:3992736-3992755 MS.gene042286:CDS 35.0%
GCTGCAAACATTATAAAAGG+AGG + chr8.2:3992809-3992828 MS.gene042286:CDS 35.0%
GTCGTATAAACTGTAAGCAT+CGG - chr8.2:3990967-3990986 None:intergenic 35.0%
GTGAATGATGCTAAACAGAA+AGG + chr8.2:3993471-3993490 MS.gene042286:CDS 35.0%
TAGTTTGGTTGAGAAAGTGA+AGG + chr8.2:3993353-3993372 MS.gene042286:CDS 35.0%
TATTGAGGCTTTCTTGTAGT+AGG - chr8.2:3990236-3990255 None:intergenic 35.0%
TATTTGGTCCTTTCATTTCC+CGG - chr8.2:3991557-3991576 None:intergenic 35.0%
TCAATGAAGGTTGTAAGATC+TGG + chr8.2:3991455-3991474 MS.gene042286:intron 35.0%
TCATCAGCCAATTTCATTGA+AGG + chr8.2:3993444-3993463 MS.gene042286:CDS 35.0%
TGATGATTCTGATACAACTG+GGG - chr8.2:3993430-3993449 None:intergenic 35.0%
TGTATCTTTCGTTAGTCGTT+TGG - chr8.2:3993010-3993029 None:intergenic 35.0%
TGTTAAGGTTGTCTTGGTAA+TGG + chr8.2:3993317-3993336 MS.gene042286:CDS 35.0%
TGTTGTTAGAGGCTATAACT+TGG + chr8.2:3990643-3990662 MS.gene042286:intron 35.0%
TTGACTGGATAGTTAAAAGG+CGG - chr8.2:3991926-3991945 None:intergenic 35.0%
TTGATGTGAGATCTACATAG+GGG + chr8.2:3990847-3990866 MS.gene042286:intron 35.0%
TTTGACGAGTATCACAATGA+AGG - chr8.2:3992030-3992049 None:intergenic 35.0%
! AACATCTCCGTCTAAAATCT+CGG - chr8.2:3990147-3990166 None:intergenic 35.0%
! AGCTAGAACTTTTATGAGGT+AGG - chr8.2:3992345-3992364 None:intergenic 35.0%
! ATAGTTTTCCGGGAAATGAA+AGG + chr8.2:3991546-3991565 MS.gene042286:CDS 35.0%
! ATGCATGTATCTCAGGATTT+TGG - chr8.2:3991721-3991740 None:intergenic 35.0%
! CAAGAAGCGTATGATGTAAT+TGG - chr8.2:3993169-3993188 None:intergenic 35.0%
! CTTGGTTTCAGATAGTTTTC+CGG + chr8.2:3991535-3991554 MS.gene042286:CDS 35.0%
! GCTAGAACTTTTATGAGGTA+GGG - chr8.2:3992344-3992363 None:intergenic 35.0%
! TTGGTTTCAGATAGTTTTCC+GGG + chr8.2:3991536-3991555 MS.gene042286:CDS 35.0%
!! ATGTTTGGTTCTAATTTCGG+AGG - chr8.2:3994086-3994105 None:intergenic 35.0%
!! CAAAGTAGAAACTCTAGAGT+TGG - chr8.2:3990751-3990770 None:intergenic 35.0%
!! CTTCTTTGAAATTGCAATGC+CGG - chr8.2:3992708-3992727 None:intergenic 35.0%
!! GCTTTGCTATTTCTTTGACT+AGG - chr8.2:3991314-3991333 None:intergenic 35.0%
!! GTCAGTTTTCTTAGAGTGTT+TGG - chr8.2:3993073-3993092 None:intergenic 35.0%
!!! ACAAAAGTTTTTGGTCACGT+AGG - chr8.2:3990702-3990721 None:intergenic 35.0%
!!! ATTTTGCTTGGTTGATGATG+TGG + chr8.2:3991846-3991865 MS.gene042286:intron 35.0%
AACACAGCTGATTAGACCTT+TGG - chr8.2:3992527-3992546 None:intergenic 40.0%
AAGGTGGCAAAACTAAGTGT+TGG + chr8.2:3993378-3993397 MS.gene042286:CDS 40.0%
AATTAGCACTTCTGGTGCAA+AGG + chr8.2:3992860-3992879 MS.gene042286:intron 40.0%
ACACAGCTGATTAGACCTTT+GGG - chr8.2:3992526-3992545 None:intergenic 40.0%
AGAGAGAAGGGAATCTCATT+TGG + chr8.2:3993517-3993536 MS.gene042286:CDS 40.0%
AGCAAAAGATGCAGTTACAG+AGG + chr8.2:3991335-3991354 MS.gene042286:CDS 40.0%
AGCCAATTTCATTGAAGGCT+TGG + chr8.2:3993449-3993468 MS.gene042286:CDS 40.0%
AGGCATGATTCCGTTACAAA+TGG + chr8.2:3992730-3992749 MS.gene042286:CDS 40.0%
AGTTGCTAGCATTACAATGG+TGG - chr8.2:3993647-3993666 None:intergenic 40.0%
ATCCAGGAGTGAACTGTATA+AGG + chr8.2:3992587-3992606 MS.gene042286:CDS 40.0%
ATGGCTAAGATCACTCCTAA+TGG - chr8.2:3991902-3991921 None:intergenic 40.0%
CAAATATTGCCTCACTTCCA+AGG + chr8.2:3991571-3991590 MS.gene042286:CDS 40.0%
CAAGTGTTTGTGAGAGCTAA+TGG - chr8.2:3992277-3992296 None:intergenic 40.0%
CACCAAGCCTTCAATGAAAT+TGG - chr8.2:3993454-3993473 None:intergenic 40.0%
CATGGTTCATTGCTTTCACT+TGG + chr8.2:3992492-3992511 MS.gene042286:CDS 40.0%
CATGTCTCAATTAGCACTTC+TGG + chr8.2:3992852-3992871 MS.gene042286:intron 40.0%
CCTCCCAATTCCATTTGTAA+CGG - chr8.2:3992743-3992762 None:intergenic 40.0%
CCTGAGATACATGCATTCAA+GGG + chr8.2:3991725-3991744 MS.gene042286:intron 40.0%
CGGCATTGCAATTTCAAAGA+AGG + chr8.2:3992706-3992725 MS.gene042286:CDS 40.0%
CGGCGAGAAATGAAGTTATA+AGG + chr8.2:3991009-3991028 MS.gene042286:intron 40.0%
CTCCCAAGAGGAAGTTAATA+AGG + chr8.2:3991167-3991186 MS.gene042286:CDS 40.0%
CTTGGAAGTGAGGCAATATT+TGG - chr8.2:3991573-3991592 None:intergenic 40.0%
GAAGAAGGAGTAAGGATTCT+TGG + chr8.2:3991500-3991519 MS.gene042286:CDS 40.0%
GAATGGAAGAAATCTACCTC+TGG + chr8.2:3990188-3990207 MS.gene042286:CDS 40.0%
GCCAAGAATACAAGAGAGAA+GGG + chr8.2:3993505-3993524 MS.gene042286:CDS 40.0%
GCTGATGATTCTGATACAAC+TGG - chr8.2:3993432-3993451 None:intergenic 40.0%
GGAATCAGTTGCTGATAGTT+TGG + chr8.2:3993338-3993357 MS.gene042286:CDS 40.0%
GGTTGTAAGATCTGGTGATT+TGG + chr8.2:3991463-3991482 MS.gene042286:intron 40.0%
GTTTCTTACTGTGCTGAAGA+AGG + chr8.2:3991485-3991504 MS.gene042286:CDS 40.0%
TACTGCTGTTAAGGTTGTCT+TGG + chr8.2:3993311-3993330 MS.gene042286:CDS 40.0%
TCCCTTCTCTCTTGTATTCT+TGG - chr8.2:3993509-3993528 None:intergenic 40.0%
TCCTGAGATACATGCATTCA+AGG + chr8.2:3991724-3991743 MS.gene042286:intron 40.0%
TGAAATAGACCTTGGAAGTG+AGG - chr8.2:3991583-3991602 None:intergenic 40.0%
TGAAGATGCTGACCTTGATT+TGG + chr8.2:3992784-3992803 MS.gene042286:CDS 40.0%
TGATGTGAGATCTACATAGG+GGG + chr8.2:3990848-3990867 MS.gene042286:intron 40.0%
TGCATGGAGATCATTGTTAG+AGG - chr8.2:3991142-3991161 None:intergenic 40.0%
TGCCAAGAATACAAGAGAGA+AGG + chr8.2:3993504-3993523 MS.gene042286:CDS 40.0%
TGGATAGTTAAAAGGCGGAA+TGG - chr8.2:3991921-3991940 None:intergenic 40.0%
TGGCTAAGATCACTCCTAAT+GGG - chr8.2:3991901-3991920 None:intergenic 40.0%
TGTTTGCAGCAACCAAATCA+AGG - chr8.2:3992799-3992818 None:intergenic 40.0%
! GACCAGTTTTGCCTGTAATT+AGG + chr8.2:3993598-3993617 MS.gene042286:CDS 40.0%
! TCTCATTTGGCCTTTGCTAT+TGG + chr8.2:3993530-3993549 MS.gene042286:CDS 40.0%
! TCTGTAACTGCATCTTTTGC+TGG - chr8.2:3991336-3991355 None:intergenic 40.0%
! TTGCAGCTTTGTGTTCTTTG+AGG - chr8.2:3991281-3991300 None:intergenic 40.0%
! TTTGAGACAGCAAGATTGAC+TGG - chr8.2:3991941-3991960 None:intergenic 40.0%
!! TGGACTTGCTACACCTAAAA+AGG + chr8.2:3990354-3990373 MS.gene042286:intron 40.0%
!!! GATAGCAACACTTTTTCCAG+AGG - chr8.2:3990207-3990226 None:intergenic 40.0%
ACAGGCAAAACTGGTCCAAA+TGG - chr8.2:3993594-3993613 None:intergenic 45.0%
ACTGTGCTGAAGAAGGAGTA+AGG + chr8.2:3991492-3991511 MS.gene042286:CDS 45.0%
AGACATGAGAATTGCATGGG+AGG + chr8.2:3993566-3993585 MS.gene042286:CDS 45.0%
AGCATCGTACAGCCATTAGA+AGG - chr8.2:3992443-3992462 None:intergenic 45.0%
AGGAGTAAGGATTCTTGGAG+AGG + chr8.2:3991505-3991524 MS.gene042286:CDS 45.0%
AGTGAAGCTATCGGATAGCA+AGG - chr8.2:3992675-3992694 None:intergenic 45.0%
ATATCACAGTCATCCTCAGG+TGG - chr8.2:3993405-3993424 None:intergenic 45.0%
ATCTCCACCAGTGAAGCTAT+CGG - chr8.2:3992684-3992703 None:intergenic 45.0%
CACCTTATACAGTTCACTCC+TGG - chr8.2:3992592-3992611 None:intergenic 45.0%
CCCTTGAATGCATGTATCTC+AGG - chr8.2:3991728-3991747 None:intergenic 45.0%
CCGTTACAAATGGAATTGGG+AGG + chr8.2:3992740-3992759 MS.gene042286:CDS 45.0%
CTCGCCGAAAAGAGCAATTA+GGG - chr8.2:3990996-3991015 None:intergenic 45.0%
CTGTACGATGCTGCATTTCA+GGG + chr8.2:3992451-3992470 MS.gene042286:intron 45.0%
GAAACAGGGCCATAAGAAAG+TGG - chr8.2:3992087-3992106 None:intergenic 45.0%
GAATTTCCAGCAATGAGTGC+AGG - chr8.2:3991971-3991990 None:intergenic 45.0%
GACTTCCTTACAATGCATCC+AGG + chr8.2:3992571-3992590 MS.gene042286:CDS 45.0%
GCAAGGTTACAAGTCAGGAT+AGG - chr8.2:3992658-3992677 None:intergenic 45.0%
GCCAGACATGAGAATTGCAT+GGG + chr8.2:3993563-3993582 MS.gene042286:CDS 45.0%
GCGTATGATGTAATTGGCTG+AGG - chr8.2:3993163-3993182 None:intergenic 45.0%
GGAGGAGTGAATTTGCAGAT+TGG + chr8.2:3990512-3990531 MS.gene042286:intron 45.0%
GGAGTAAGGATTCTTGGAGA+GGG + chr8.2:3991506-3991525 MS.gene042286:CDS 45.0%
GGATAGCAAGGTTACAAGTC+AGG - chr8.2:3992663-3992682 None:intergenic 45.0%
GGTCTAATCAGCTGTGTTAC+TGG + chr8.2:3992529-3992548 MS.gene042286:CDS 45.0%
GGTTGAGAAAGTGAAGGCTA+AGG + chr8.2:3993359-3993378 MS.gene042286:CDS 45.0%
GTCACGTAGGATTCACTTGT+AGG - chr8.2:3990689-3990708 None:intergenic 45.0%
GTGATATCACAGTCATCCTC+AGG - chr8.2:3993408-3993427 None:intergenic 45.0%
GTTCATTGCTTTCACTTGGC+TGG + chr8.2:3992496-3992515 MS.gene042286:CDS 45.0%
TCACTCCTGGATGCATTGTA+AGG - chr8.2:3992579-3992598 None:intergenic 45.0%
TCAGGGATGTGTGTTCACAA+AGG + chr8.2:3994250-3994269 MS.gene042286:intron 45.0%
TCCCATGCAATTCTCATGTC+TGG - chr8.2:3993567-3993586 None:intergenic 45.0%
TCTCGCCGAAAAGAGCAATT+AGG - chr8.2:3990997-3991016 None:intergenic 45.0%
TCTTGGAGAGGGAAAGTTCT+TGG + chr8.2:3991517-3991536 MS.gene042286:CDS 45.0%
TGAGAAAGTGAAGGCTAAGG+TGG + chr8.2:3993362-3993381 MS.gene042286:CDS 45.0%
TGCTAGCAACTTTGGACTTC+AGG + chr8.2:3993656-3993675 MS.gene042286:CDS 45.0%
TTGCTATCCGATAGCTTCAC+TGG + chr8.2:3992674-3992693 MS.gene042286:intron 45.0%
TTTATGAGGTAGGGCCTGTT+TGG - chr8.2:3992335-3992354 None:intergenic 45.0%
! AAAGACCCCACTTTGGAAGA+GGG + chr8.2:3991227-3991246 MS.gene042286:CDS 45.0%
! ATCAGCTGTGTTACTGGCAA+AGG + chr8.2:3992535-3992554 MS.gene042286:CDS 45.0%
! GTGCTTGCCGAGATTTTAGA+CGG + chr8.2:3990137-3990156 MS.gene042286:CDS 45.0%
! TCAGAGGTGTACTGCTGTTA+AGG + chr8.2:3993302-3993321 MS.gene042286:CDS 45.0%
! TTCATGGATTGTAGTGGCAC+CGG - chr8.2:3992931-3992950 None:intergenic 45.0%
AGCACTTCTGGTGCAAAGGA+AGG + chr8.2:3992864-3992883 MS.gene042286:intron 50.0%
AGCTGTTGCAGCTCTTCACA+TGG + chr8.2:3992474-3992493 MS.gene042286:CDS 50.0%
AGCTTCACTGGTGGAGATAC+CGG + chr8.2:3992686-3992705 MS.gene042286:intron 50.0%
AGTTCAGCCCTCTTCCAAAG+TGG - chr8.2:3991237-3991256 None:intergenic 50.0%
ATAAATTCTGCCCCAGCTCG+TGG + chr8.2:3994326-3994345 MS.gene042286:CDS 50.0%
ATTGCATGGGAGGAGCCATT+TGG + chr8.2:3993576-3993595 MS.gene042286:CDS 50.0%
ATTGCTCCTGCACTCATTGC+TGG + chr8.2:3991962-3991981 MS.gene042286:CDS 50.0%
CACTTCTGGTGCAAAGGAAG+GGG + chr8.2:3992866-3992885 MS.gene042286:intron 50.0%
CTATCCGATAGCTTCACTGG+TGG + chr8.2:3992677-3992696 MS.gene042286:intron 50.0%
GAGGGCTGAACTTCTTCACA+AGG + chr8.2:3991245-3991264 MS.gene042286:CDS 50.0%
GCACTTCTGGTGCAAAGGAA+GGG + chr8.2:3992865-3992884 MS.gene042286:intron 50.0%
GCTGTACGATGCTGCATTTC+AGG + chr8.2:3992450-3992469 MS.gene042286:intron 50.0%
GGCCAGACATGAGAATTGCA+TGG + chr8.2:3993562-3993581 MS.gene042286:CDS 50.0%
GTTCAGCCCTCTTCCAAAGT+GGG - chr8.2:3991236-3991255 None:intergenic 50.0%
TAAATTCTGCCCCAGCTCGT+GGG + chr8.2:3994327-3994346 MS.gene042286:CDS 50.0%
TTCAGCCCTCTTCCAAAGTG+GGG - chr8.2:3991235-3991254 None:intergenic 50.0%
! CAAAGACCCCACTTTGGAAG+AGG + chr8.2:3991226-3991245 MS.gene042286:CDS 50.0%
! CTGTGTTACTGGCAAAGGCT+CGG + chr8.2:3992540-3992559 MS.gene042286:CDS 50.0%
!! ACTAAGTGTTGGACCACCTG+AGG + chr8.2:3993389-3993408 MS.gene042286:CDS 50.0%
!!! CACTTGGCTGGTTTTCCCAA+AGG + chr8.2:3992508-3992527 MS.gene042286:CDS 50.0%
AAATGATCTGGCCCACGAGC+TGG - chr8.2:3994341-3994360 None:intergenic 55.0%
AATGATCTGGCCCACGAGCT+GGG - chr8.2:3994340-3994359 None:intergenic 55.0%
ACTGGCAAAGGCTCGGAGAT+TGG + chr8.2:3992547-3992566 MS.gene042286:CDS 55.0%
CATGGGCAAAGACCCCACTT+TGG + chr8.2:3991220-3991239 MS.gene042286:CDS 55.0%
TGTGCTCAAGCCTCCAACTC+AGG + chr8.2:3991994-3992013 MS.gene042286:CDS 55.0%
ATGATCTGGCCCACGAGCTG+GGG - chr8.2:3994339-3994358 None:intergenic 60.0%
CCTCTTGGGAGCAAGCTGCA+TGG - chr8.2:3991158-3991177 None:intergenic 60.0%
CTGGTGCAAAGGAAGGGGCA+GGG + chr8.2:3992871-3992890 MS.gene042286:intron 60.0%
TCTGGTGCAAAGGAAGGGGC+AGG + chr8.2:3992870-3992889 MS.gene042286:intron 60.0%
! CCATGCAGCTTGCTCCCAAG+AGG + chr8.2:3991155-3991174 MS.gene042286:intron 60.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 3990122 3994370 3990122 ID=MS.gene042286
chr8.2 mRNA 3990122 3994370 3990122 ID=MS.gene042286.t1;Parent=MS.gene042286
chr8.2 exon 3990122 3990266 3990122 ID=MS.gene042286.t1.exon1;Parent=MS.gene042286.t1
chr8.2 CDS 3990122 3990266 3990122 ID=cds.MS.gene042286.t1;Parent=MS.gene042286.t1
chr8.2 exon 3991163 3991356 3991163 ID=MS.gene042286.t1.exon2;Parent=MS.gene042286.t1
chr8.2 CDS 3991163 3991356 3991163 ID=cds.MS.gene042286.t1;Parent=MS.gene042286.t1
chr8.2 exon 3991464 3991592 3991464 ID=MS.gene042286.t1.exon3;Parent=MS.gene042286.t1
chr8.2 CDS 3991464 3991592 3991464 ID=cds.MS.gene042286.t1;Parent=MS.gene042286.t1
chr8.2 exon 3991896 3992015 3991896 ID=MS.gene042286.t1.exon4;Parent=MS.gene042286.t1
chr8.2 CDS 3991896 3992015 3991896 ID=cds.MS.gene042286.t1;Parent=MS.gene042286.t1
chr8.2 exon 3992472 3992608 3992472 ID=MS.gene042286.t1.exon5;Parent=MS.gene042286.t1
chr8.2 CDS 3992472 3992608 3992472 ID=cds.MS.gene042286.t1;Parent=MS.gene042286.t1
chr8.2 exon 3992688 3992843 3992688 ID=MS.gene042286.t1.exon6;Parent=MS.gene042286.t1
chr8.2 CDS 3992688 3992843 3992688 ID=cds.MS.gene042286.t1;Parent=MS.gene042286.t1
chr8.2 exon 3993299 3993677 3993299 ID=MS.gene042286.t1.exon7;Parent=MS.gene042286.t1
chr8.2 CDS 3993299 3993677 3993299 ID=cds.MS.gene042286.t1;Parent=MS.gene042286.t1
chr8.2 exon 3994254 3994370 3994254 ID=MS.gene042286.t1.exon8;Parent=MS.gene042286.t1
chr8.2 CDS 3994254 3994370 3994254 ID=cds.MS.gene042286.t1;Parent=MS.gene042286.t1
Gene Sequence

>MS.gene042286

ATGGCTGCTACTGGAGTGCTTGCCGAGATTTTAGACGGAGATGTTTACAAATATTATGCTGATGGAGAATGGAAGAAATCTACCTCTGGAAAAAGTGTTGCTATCATCAACCCTACTACAAGAAAGCCTCAATACAAAGTTCAAGGTAATTTCCCTTTCTCTTTTGTTTTCAAGTCCTTTTATTTTAGTTACTTTGTATGATTCTTCATGTGGATGTGATCATGTGAGAATATGGACTTGCTACACCTAAAAAGGATGAACAAAAGCAACTATGTATGTTTACTGAATGCAAGACTTCAAAATTTTATAACAAGGATATATTCTGAAATTTCAACTTTTAATTTCACTGCTAGTAATTGTGAAAACACAGATACTGTTAAAAACGTTTAGGGAGGAGTGAATTTGCAGATTGGTCTTAGAAATTGTGAACAACGATCAAAATAATCTCTGAATTTTACGAATTGGCAAATACATCTCTGAAATAGTAACACATCAGTCAAAATGATCCATCCATTAACTTATGTTGTTAGAGGCTATAACTTGGTATGCTAAATGAACATGTAGCCTACAAGTGAATCCTACGTGACCAAAAACTTTTGTTGCACGTTAAATTCATGTATTTAATGCCAACTCTAGAGTTTCTACTTTGAGATCCAAGCATGTTAAATAAAATTACCTCGGAATTTTCGTATGCAATTTAGTTGTAGTCTGTAGATAATGTATTATTGATGTGAGATCTACATAGGGGGCTATATATTCAATTAACAAATGAACCGTTTTGATGATTCTTTACAATTTTGAAGATAGATTTGCTGATTCAAAAAACTCAAGGACTATTTCGACCGATGCTTACAGTTTATACGACTAATTTCCCTAATTGCTCTTTTCGGCGAGAAATGAAGTTATAAGGAATGGAGATGACATTTGAACACTATGTCATTCTTTTAATAACAGTAAAAAGAAAATAGACTGATAGATAAATATAACAGAAAACAACTATGTTCAATAGGTTCTAAGCCTCTAACAATGATCTCCATGCAGCTTGCTCCCAAGAGGAAGTTAATAAGGTTATGGATTCAGCAAAATCAGCACAAAAGTCATGGGCAAAGACCCCACTTTGGAAGAGGGCTGAACTTCTTCACAAGGCAGCTGCAATCCTCAAAGAACACAAAGCTGCAATTGCAGAATGCCTAGTCAAAGAAATAGCAAAGCCAGCAAAAGATGCAGTTACAGAGGTGCATATTGTGTTACAGTGTTATGTTGAATAAGTTAAGTGTTGCTTAGGACTATAATATCGAGAAATTATGAAAATGATTGGAATTTTTAAATTTTTTCAATGAAGGTTGTAAGATCTGGTGATTTGGTTTCTTACTGTGCTGAAGAAGGAGTAAGGATTCTTGGAGAGGGAAAGTTCTTGGTTTCAGATAGTTTTCCGGGAAATGAAAGGACCAAATATTGCCTCACTTCCAAGGTCTATTTCACTACATATGCTACTTCTTAATATTCAATTCATATGTTACTATATACTTCAATCATTTTAGAACTGGAAAATCAATAGGACAATGTACTTTATAAAGTCAATAAATTGGCGCGACACCAAAATCCTGAGATACATGCATTCAAGGGTGTAATATATCTGCATTGCATTCAATTATCTTAGTAACTTTTAATGACTTGTAAATTAAATGATCATGGTGAACTGTCATGTGTAATCTTATTGTTTTATTTTGCTTGGTTGATGATGTGGTCTAAGAAAGTTGCAATTGATTTTCAGATCCCATTAGGAGTGATCTTAGCCATTCCGCCTTTTAACTATCCAGTCAATCTTGCTGTCTCAAAAATTGCTCCTGCACTCATTGCTGGAAATTCTATTGTGCTCAAGCCTCCAACTCAGGTAATTTATATCCTTCATTGTGATACTCGTCAAAAACACTACATATGGGATCCATATTCTCATACTATCCACTTTCTTATGGCCCTGTTTCGATAAAAAGCTTAATTAAGAACTTATAGATTAAGCGCTTAACATATAAGTGTTTATGCATAAGTCATTTCTATAACAAATAAAATAAACTCAAACTATTTTCATATAGGCCATAAACTGTTTTCTTAATAAGCTGACAACAACTTATTGGCATGTCATAAGCGATTTCCATTAGCTCTCACAAACACTTGTGATTATAATTGTAAATAAGCTCAAATAAATCAATCCAAACAGGCCCTACCTCATAAAAGTTCTAGCTAATGTCTGAGCCGTTAAAAGAAACCAAAATAAAAAGTTTATGTCAGAATTTTTAAGTCTTATTTTCTTTACTGTTCCTTCTAATGGCTGTACGATGCTGCATTTCAGGGAGCTGTTGCAGCTCTTCACATGGTTCATTGCTTTCACTTGGCTGGTTTTCCCAAAGGTCTAATCAGCTGTGTTACTGGCAAAGGCTCGGAGATTGGTGACTTCCTTACAATGCATCCAGGAGTGAACTGTATAAGGTGATTATATATCTATATGATGCTGTGATAGTATATGCTACTTTTACCTATCCTGACTTGTAACCTTGCTATCCGATAGCTTCACTGGTGGAGATACCGGCATTGCAATTTCAAAGAAGGCAGGCATGATTCCGTTACAAATGGAATTGGGAGGAAAAGATGCTTGCATTGTACTTGAAGATGCTGACCTTGATTTGGTTGCTGCAAACATTATAAAAGGAGGTTTTTCATACAGGTGAATAACATGTCTCAATTAGCACTTCTGGTGCAAAGGAAGGGGCAGGGTTTGTCTTTCCATGCATTTACTTCATAAATATAACCGGTGCCACTACAATCCATGAATGTATTTAAATTGCAAACGCATCTCTATGTTTATCTTTTATTAGTAATTTTATAGACCAAACGACTAACGAAAGATACATTTGATGATCAAAATAACTAACAAAAGATACATTTGAGGACCAAACACTCTAAGAAAACTGACATCGCTTAACACATTCAAAGCCCAAAATGACCGTTTATTCATATAACTGCTAATACTAAGCTAGACACCTCAGCCAATTACATCATACGCTTCTTGATATGCATTATACAATATAAGATGAATGTTGCATGGTTAAAATTCTCATCTAGAAATTAAATGCATAGTCTCTTGATACTGAACTTTTTTTTTAATTTTTTTATGAAAAGTGGTCAGAGGTGTACTGCTGTTAAGGTTGTCTTGGTAATGGAATCAGTTGCTGATAGTTTGGTTGAGAAAGTGAAGGCTAAGGTGGCAAAACTAAGTGTTGGACCACCTGAGGATGACTGTGATATCACCCCAGTTGTATCAGAATCATCAGCCAATTTCATTGAAGGCTTGGTGAATGATGCTAAACAGAAAGGAGCAACATTCTGCCAAGAATACAAGAGAGAAGGGAATCTCATTTGGCCTTTGCTATTGGATAATGTTAGGCCAGACATGAGAATTGCATGGGAGGAGCCATTTGGACCAGTTTTGCCTGTAATTAGGATCAATTCTGTTGAAGAAGGTATCCACCATTGTAATGCTAGCAACTTTGGACTTCAGGTAAAATCTTCAACCCTCTCACTTCAACAATCAATTACTCTTAGAAAGAAATAGTATAATGCCTTCTAATACTAAAATGAGTTTAGTTTTGGTACATATTGAGTGTAATTTTTTTTATACTAGCAACAATAGAGCACAAACGATCGTATGTGTGACTTTAGAACAAATTTTGCTTTAAGCCAAACGTTTTTACTGTGTGTTTGATTATGGAGTGACAAAAATTGATTTTGATTAACACCAAGTTAAAAATAAAGTGTTTTATGTTTAAATATATATCTTAGCTTCAACTTAGAATCGACTTTAGAGACAATCAATTCTACTGAAAAACATCCAAACATGTCAAAATCAGTTTTACACCTCTGAAATCATTTTTTTTTTAGGGAACCTCTGAAATCATTTTTAACACCTCCGAAATTAGAACCAAACATTAATTTAATGATATGACGATTAAGATTGACTGTGTAAAAAATCTTTGCATTTACCGTGCATGAATTAAATTCTAATAATTTATACTTGTGATGTGTTAGCATGCTAATAATAATTTGTATGAACAACATTGAACTTGAAATTGTTCAGGGATGTGTGTTCACAAAGGATATCAACAAAGCAATGATGATTAGTGATGCAATGGAATCAGGAACAGTTCAGATAAATTCTGCCCCAGCTCGTGGGCCAGATCATTTTCCCTTTCAG
Protein sequence

>MS.gene042286.t1

MAATGVLAEILDGDVYKYYADGEWKKSTSGKSVAIINPTTRKPQYKVQACSQEEVNKVMDSAKSAQKSWAKTPLWKRAELLHKAAAILKEHKAAIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVILAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGGDTGIAISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLVEKVKAKVAKLSVGPPEDDCDITPVVSESSANFIEGLVNDAKQKGATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTKDINKAMMISDAMESGTVQINSAPARGPDHFPFQ