Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045681.t1 | XP_003605577.1 | 100 | 122 | 0 | 0 | 1 | 122 | 1 | 122 | 1.40E-61 | 245.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045681.t1 | Q9STY6 | 88.5 | 122 | 14 | 0 | 1 | 122 | 1 | 122 | 4.9e-55 | 214.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045681.t1 | G7JPA9 | 100.0 | 122 | 0 | 0 | 1 | 122 | 1 | 122 | 1.0e-61 | 245.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene045681 | MS.gene04591 | PPI |
| MS.gene045681 | MS.gene072375 | PPI |
| MS.gene045681 | MS.gene017955 | PPI |
| MS.gene045681 | MS.gene059832 | PPI |
| MS.gene045681 | MS.gene77739 | PPI |
| MS.gene045681 | MS.gene72479 | PPI |
| MS.gene045681 | MS.gene78060 | PPI |
| MS.gene045681 | MS.gene031439 | PPI |
| MS.gene045681 | MS.gene068750 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045681.t1 | MTR_0157s0070 | 100.000 | 122 | 0 | 0 | 1 | 122 | 1 | 122 | 4.56e-88 | 251 |
| MS.gene045681.t1 | MTR_4g034030 | 100.000 | 122 | 0 | 0 | 1 | 122 | 1 | 122 | 4.56e-88 | 251 |
| MS.gene045681.t1 | MTR_7g092720 | 98.361 | 122 | 2 | 0 | 1 | 122 | 1 | 122 | 7.09e-87 | 248 |
| MS.gene045681.t1 | MTR_2g085090 | 97.500 | 120 | 3 | 0 | 3 | 122 | 4 | 123 | 6.20e-84 | 241 |
| MS.gene045681.t1 | MTR_1g091057 | 97.500 | 120 | 3 | 0 | 3 | 122 | 4 | 123 | 6.20e-84 | 241 |
| MS.gene045681.t1 | MTR_4g034030 | 100.000 | 85 | 0 | 0 | 38 | 122 | 3 | 87 | 1.15e-58 | 176 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045681.t1 | AT3G47370 | 88.525 | 122 | 14 | 0 | 1 | 122 | 1 | 122 | 2.90e-76 | 221 |
| MS.gene045681.t1 | AT3G47370 | 88.525 | 122 | 14 | 0 | 1 | 122 | 1 | 122 | 2.90e-76 | 221 |
| MS.gene045681.t1 | AT3G47370 | 88.525 | 122 | 14 | 0 | 1 | 122 | 1 | 122 | 2.90e-76 | 221 |
| MS.gene045681.t1 | AT5G62300 | 88.430 | 121 | 14 | 0 | 2 | 122 | 4 | 124 | 2.75e-75 | 219 |
| MS.gene045681.t1 | AT5G62300 | 88.430 | 121 | 14 | 0 | 2 | 122 | 4 | 124 | 2.75e-75 | 219 |
| MS.gene045681.t1 | AT3G45030 | 88.430 | 121 | 14 | 0 | 2 | 122 | 4 | 124 | 2.75e-75 | 219 |
Find 30 sgRNAs with CRISPR-Local
Find 117 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGCTAAGGATAAGCATCTT+AGG | 0.267467 | 4.3:-64570304 | MS.gene045681:CDS |
| AGAGAGTGATCCTAATCTTA+TGG | 0.362238 | 4.3:+64570489 | None:intergenic |
| TCTTCCAAACCAGGCTTAGT+TGG | 0.410878 | 4.3:+64570527 | None:intergenic |
| GCCTGGTTTGGAAGAATCTC+AGG | 0.435840 | 4.3:-64570519 | MS.gene045681:CDS |
| GAAACCAACTAAGCCTGGTT+TGG | 0.438912 | 4.3:-64570531 | MS.gene045681:CDS |
| AGGAACAGATCCATAAGATT+AGG | 0.460004 | 4.3:-64570499 | MS.gene045681:CDS |
| GTAATCTGCTTGACAACATC+AGG | 0.478418 | 4.3:+64568470 | None:intergenic |
| ACATGTTCAGAATCTCGAAA+AGG | 0.489111 | 4.3:-64570459 | MS.gene045681:CDS |
| TCCTGAGATTCTTCCAAACC+AGG | 0.490218 | 4.3:+64570518 | None:intergenic |
| GGTAACCTCAACTTCGACAC+CGG | 0.491925 | 4.3:+64568430 | None:intergenic |
| AGGAAAACTCCTTGTGGAGA+AGG | 0.495414 | 4.3:-64570233 | MS.gene045681:intron |
| CATGTTCAGAATCTCGAAAA+GGG | 0.517875 | 4.3:-64570458 | MS.gene045681:intron |
| TGCTAAGGATAAGCATCTTA+GGG | 0.525206 | 4.3:-64570303 | MS.gene045681:CDS |
| TATGGTAGTTTGTAGTGACT+TGG | 0.528686 | 4.3:-64570333 | MS.gene045681:intron |
| GCAATGAAACCAACTAAGCC+TGG | 0.533074 | 4.3:-64570536 | MS.gene045681:CDS |
| TGACTTGGTTCGTGGTGCTA+AGG | 0.539891 | 4.3:-64570318 | MS.gene045681:CDS |
| GGATAAGCATCTTAGGGTGA+AGG | 0.543022 | 4.3:-64570297 | MS.gene045681:CDS |
| GTTTGTAGTGACTTGGTTCG+TGG | 0.553261 | 4.3:-64570326 | MS.gene045681:CDS |
| TGAACCCGGTGTCGAAGTTG+AGG | 0.555520 | 4.3:-64568435 | MS.gene045681:CDS |
| TGATAATCAAGCATCTGCAA+TGG | 0.568022 | 4.3:+64568409 | None:intergenic |
| GATAAGCATCTTAGGGTGAA+GGG | 0.583411 | 4.3:-64570296 | MS.gene045681:CDS |
| CAACATCAGGTGAACTGTAG+AGG | 0.586753 | 4.3:+64568483 | None:intergenic |
| GTAACCTCAACTTCGACACC+GGG | 0.590799 | 4.3:+64568431 | None:intergenic |
| ATGGTTAAGGTACAAACACA+TGG | 0.600096 | 4.3:-64568544 | MS.gene045681:intron |
| ACCACTAGGAAAACTCCTTG+TGG | 0.627419 | 4.3:-64570239 | MS.gene045681:CDS |
| TAAAATTTACCTTCTCCACA+AGG | 0.628775 | 4.3:+64570224 | None:intergenic |
| AAGTGCTTCACATTACCACT+AGG | 0.639472 | 4.3:-64570253 | MS.gene045681:CDS |
| ACATCGATCACAATTGAACC+CGG | 0.686873 | 4.3:-64568449 | MS.gene045681:CDS |
| TGGTTAAGGTACAAACACAT+GGG | 0.706931 | 4.3:-64568543 | MS.gene045681:intron |
| TTAGGGTGAAGGGACCAGTG+AGG | 0.764206 | 4.3:-64570286 | MS.gene045681:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATAAGACAATCAAAA+CGG | + | chr4.3:64569779-64569798 | None:intergenic | 15.0% |
| !!! | AAGGTAAATTTTATTTGATT+TGG | - | chr4.3:64568749-64568768 | MS.gene045681:intron | 15.0% |
| !!! | GTAATTTTTTTGTTTTGTTA+TGG | - | chr4.3:64568612-64568631 | MS.gene045681:intron | 15.0% |
| !!! | TAGATATTAACTTTGTATTT+TGG | - | chr4.3:64569078-64569097 | MS.gene045681:intron | 15.0% |
| !! | ATAATTATAACAAAAAACCC+TGG | + | chr4.3:64569415-64569434 | None:intergenic | 20.0% |
| !! | ATAGTTGCATATTTCAAATT+GGG | - | chr4.3:64569458-64569477 | MS.gene045681:intron | 20.0% |
| !! | TATTATTCATATGTTTGTCA+AGG | + | chr4.3:64569905-64569924 | None:intergenic | 20.0% |
| !!! | ACATTTTTCAAATAAACACT+AGG | + | chr4.3:64569996-64570015 | None:intergenic | 20.0% |
| !!! | ATTTTTCAAATAAACACTAG+GGG | + | chr4.3:64569994-64570013 | None:intergenic | 20.0% |
| !!! | CATTTTTCAAATAAACACTA+GGG | + | chr4.3:64569995-64570014 | None:intergenic | 20.0% |
| !!! | TTCTAGATGTTTTTATTTGA+TGG | - | chr4.3:64568575-64568594 | MS.gene045681:intron | 20.0% |
| !!! | TTTAGGATAATCTTATGTTA+TGG | + | chr4.3:64570232-64570251 | None:intergenic | 20.0% |
| ! | AAATATGCAACTATCTAAGA+TGG | + | chr4.3:64569452-64569471 | None:intergenic | 25.0% |
| ! | GATAGTTGCATATTTCAAAT+TGG | - | chr4.3:64569457-64569476 | MS.gene045681:intron | 25.0% |
| ! | GATTAATTGACATGTATCAT+TGG | - | chr4.3:64569344-64569363 | MS.gene045681:intron | 25.0% |
| ! | GCGTAGTATAAAAAATTACA+AGG | - | chr4.3:64569275-64569294 | MS.gene045681:intron | 25.0% |
| ! | TCTTTCAAACACTTATACAT+AGG | - | chr4.3:64570203-64570222 | MS.gene045681:intron | 25.0% |
| ! | TTCACAAAATATGCAAATGA+TGG | + | chr4.3:64569108-64569127 | None:intergenic | 25.0% |
| ! | TTTGAAAATTATGAGTTTGC+TGG | - | chr4.3:64569380-64569399 | MS.gene045681:intron | 25.0% |
| !! | AAGCTATCAAAAGAACTTTT+AGG | + | chr4.3:64568861-64568880 | None:intergenic | 25.0% |
| !! | AGCTATCAAAAGAACTTTTA+GGG | + | chr4.3:64568860-64568879 | None:intergenic | 25.0% |
| !!! | AGCACTTCTGAAATAAAATT+TGG | + | chr4.3:64570027-64570046 | None:intergenic | 25.0% |
| !!! | ATTTTTGTTTGTGCTTCATA+TGG | + | chr4.3:64569558-64569577 | None:intergenic | 25.0% |
| !!! | TTTGATGGTTTTGTTTTTTG+AGG | - | chr4.3:64568590-64568609 | MS.gene045681:intron | 25.0% |
| ATTGAACACATTGAACACAT+TGG | + | chr4.3:64569247-64569266 | None:intergenic | 30.0% | |
| ATTGTCTGATCTGAATCAAA+CGG | - | chr4.3:64569127-64569146 | MS.gene045681:intron | 30.0% | |
| GTGTTTCAAATGGCTAATTT+AGG | + | chr4.3:64570249-64570268 | None:intergenic | 30.0% | |
| TAAAATTTACCTTCTCCACA+AGG | + | chr4.3:64568742-64568761 | None:intergenic | 30.0% | |
| TAAAGTAGAATTTGGGAAGA+GGG | - | chr4.3:64570104-64570123 | MS.gene045681:intron | 30.0% | |
| TCAAACATTACACTAACACA+GGG | + | chr4.3:64569630-64569649 | None:intergenic | 30.0% | |
| TGCAATATCATTTGATGTCT+TGG | - | chr4.3:64569741-64569760 | MS.gene045681:intron | 30.0% | |
| ! | TACATAGAAATTGCGTTGAT+TGG | - | chr4.3:64569715-64569734 | MS.gene045681:intron | 30.0% |
| !! | TGCACTCTAAAGTAGAATTT+GGG | - | chr4.3:64570097-64570116 | MS.gene045681:intron | 30.0% |
| !! | TTCTTTTGATAGCTTGTAGT+CGG | - | chr4.3:64568866-64568885 | MS.gene045681:intron | 30.0% |
| !! | TTGCACTCTAAAGTAGAATT+TGG | - | chr4.3:64570096-64570115 | MS.gene045681:intron | 30.0% |
| ACATGTTCAGAATCTCGAAA+AGG | - | chr4.3:64568504-64568523 | MS.gene045681:CDS | 35.0% | |
| AGAGAGTGATCCTAATCTTA+TGG | + | chr4.3:64568477-64568496 | None:intergenic | 35.0% | |
| AGGAACAGATCCATAAGATT+AGG | - | chr4.3:64568464-64568483 | MS.gene045681:CDS | 35.0% | |
| ATATCTAGACTGTCACACAT+TGG | + | chr4.3:64569156-64569175 | None:intergenic | 35.0% | |
| ATCAGCTTCATGAACTATTG+CGG | - | chr4.3:64570346-64570365 | MS.gene045681:intron | 35.0% | |
| ATGGTTAAGGTACAAACACA+TGG | - | chr4.3:64570419-64570438 | MS.gene045681:intron | 35.0% | |
| ATTAAGAACTGCACCTAGAA+AGG | + | chr4.3:64570274-64570293 | None:intergenic | 35.0% | |
| CAAACATTACACTAACACAG+GGG | + | chr4.3:64569629-64569648 | None:intergenic | 35.0% | |
| CATGTTCAGAATCTCGAAAA+GGG | - | chr4.3:64568505-64568524 | MS.gene045681:CDS | 35.0% | |
| CTAAAGTAGAATTTGGGAAG+AGG | - | chr4.3:64570103-64570122 | MS.gene045681:intron | 35.0% | |
| CTCAAACATTACACTAACAC+AGG | + | chr4.3:64569631-64569650 | None:intergenic | 35.0% | |
| GACAATCTGTTTCATGGTTA+AGG | - | chr4.3:64570406-64570425 | MS.gene045681:intron | 35.0% | |
| TAACTACGTGAACGTGAAAT+CGG | + | chr4.3:64568898-64568917 | None:intergenic | 35.0% | |
| TCATACACTGATAAGTGTCA+CGG | + | chr4.3:64568950-64568969 | None:intergenic | 35.0% | |
| TGAAACAGATTGTCAACACA+AGG | + | chr4.3:64570400-64570419 | None:intergenic | 35.0% | |
| TGCTAAGGATAAGCATCTTA+GGG | - | chr4.3:64568660-64568679 | MS.gene045681:intron | 35.0% | |
| TGGTTAAGGTACAAACACAT+GGG | - | chr4.3:64570420-64570439 | MS.gene045681:intron | 35.0% | |
| TGTTAGTGTAATGTTTGAGC+CGG | - | chr4.3:64569632-64569651 | MS.gene045681:intron | 35.0% | |
| TTAAGAACTGCACCTAGAAA+GGG | + | chr4.3:64570273-64570292 | None:intergenic | 35.0% | |
| TTGTCTGATCTGAATCAAAC+GGG | - | chr4.3:64569128-64569147 | MS.gene045681:intron | 35.0% | |
| ! | ATCTAAGATGGACAAACACA+AGG | + | chr4.3:64569440-64569459 | None:intergenic | 35.0% |
| ! | ATTTGAAACACTCCCTTTCT+AGG | - | chr4.3:64570258-64570277 | MS.gene045681:CDS | 35.0% |
| ! | TATGGTAGTTTGTAGTGACT+TGG | - | chr4.3:64568630-64568649 | MS.gene045681:intron | 35.0% |
| ! | TGTGTTGACAATCTGTTTCA+TGG | - | chr4.3:64570400-64570419 | MS.gene045681:intron | 35.0% |
| ! | TTTGACTTAGTGAGATACTG+TGG | - | chr4.3:64569488-64569507 | MS.gene045681:intron | 35.0% |
| !! | GTAATGTGAAGCACTTTTGT+TGG | + | chr4.3:64568706-64568725 | None:intergenic | 35.0% |
| !! | TAGAAAGGGAGTGTTTCAAA+TGG | + | chr4.3:64570259-64570278 | None:intergenic | 35.0% |
| !! | TCTTTTGATAGCTTGTAGTC+GGG | - | chr4.3:64568867-64568886 | MS.gene045681:intron | 35.0% |
| !!! | TCTTTGTGCATTTTGATTGC+TGG | - | chr4.3:64568779-64568798 | MS.gene045681:intron | 35.0% |
| AAACGACATATGTCAGTGTC+CGG | + | chr4.3:64569654-64569673 | None:intergenic | 40.0% | |
| AACTACGTGAACGTGAAATC+GGG | + | chr4.3:64568897-64568916 | None:intergenic | 40.0% | |
| AAGTGCTTCACATTACCACT+AGG | - | chr4.3:64568710-64568729 | MS.gene045681:intron | 40.0% | |
| ACACAGACACTTCTAATCAG+AGG | + | chr4.3:64569695-64569714 | None:intergenic | 40.0% | |
| ACAGACACTTCTAATCAGAG+GGG | + | chr4.3:64569693-64569712 | None:intergenic | 40.0% | |
| ACATCGATCACAATTGAACC+CGG | - | chr4.3:64570514-64570533 | MS.gene045681:CDS | 40.0% | |
| ATAAACACTAGGGGTCTGTT+TGG | + | chr4.3:64569985-64570004 | None:intergenic | 40.0% | |
| CACAGACACTTCTAATCAGA+GGG | + | chr4.3:64569694-64569713 | None:intergenic | 40.0% | |
| CATACACTGATAAGTGTCAC+GGG | + | chr4.3:64568949-64568968 | None:intergenic | 40.0% | |
| GATAAGCATCTTAGGGTGAA+GGG | - | chr4.3:64568667-64568686 | MS.gene045681:intron | 40.0% | |
| GTAATCTGCTTGACAACATC+AGG | + | chr4.3:64570496-64570515 | None:intergenic | 40.0% | |
| GTGCTAAGGATAAGCATCTT+AGG | - | chr4.3:64568659-64568678 | MS.gene045681:intron | 40.0% | |
| TCAGCTTCATGAACTATTGC+GGG | - | chr4.3:64570347-64570366 | MS.gene045681:intron | 40.0% | |
| ! | AGAATTTGGGAAGAGGGTAT+TGG | - | chr4.3:64570110-64570129 | MS.gene045681:intron | 40.0% |
| ! | ATATGTCGTTTCAGACACTC+AGG | - | chr4.3:64569663-64569682 | MS.gene045681:intron | 40.0% |
| ! | CTTTCTGATTTGACTCGAAC+TGG | - | chr4.3:64569219-64569238 | MS.gene045681:intron | 40.0% |
| ! | TGAGATACTGTGGTTGCTTT+CGG | - | chr4.3:64569498-64569517 | MS.gene045681:intron | 40.0% |
| !! | GAATTTGGGAAGAGGGTATT+GGG | - | chr4.3:64570111-64570130 | MS.gene045681:intron | 40.0% |
| !! | GTGGTTCTAGAGATGTACTA+GGG | - | chr4.3:64569521-64569540 | MS.gene045681:intron | 40.0% |
| ACCACTAGGAAAACTCCTTG+TGG | - | chr4.3:64568724-64568743 | MS.gene045681:intron | 45.0% | |
| ACTACGTGAACGTGAAATCG+GGG | + | chr4.3:64568896-64568915 | None:intergenic | 45.0% | |
| AGGAAAACTCCTTGTGGAGA+AGG | - | chr4.3:64568730-64568749 | MS.gene045681:intron | 45.0% | |
| CAACATCAGGTGAACTGTAG+AGG | + | chr4.3:64570483-64570502 | None:intergenic | 45.0% | |
| GAAACCAACTAAGCCTGGTT+TGG | - | chr4.3:64568432-64568451 | MS.gene045681:CDS | 45.0% | |
| GCAATGAAACCAACTAAGCC+TGG | - | chr4.3:64568427-64568446 | MS.gene045681:CDS | 45.0% | |
| GGATAAGCATCTTAGGGTGA+AGG | - | chr4.3:64568666-64568685 | MS.gene045681:intron | 45.0% | |
| TCCTGAGATTCTTCCAAACC+AGG | + | chr4.3:64568448-64568467 | None:intergenic | 45.0% | |
| TCTTCCAAACCAGGCTTAGT+TGG | + | chr4.3:64568439-64568458 | None:intergenic | 45.0% | |
| TTAGTGTCTGTGTCCATGTC+CGG | - | chr4.3:64569004-64569023 | MS.gene045681:intron | 45.0% | |
| TTTCATAGTGGTCAGCACCA+CGG | - | chr4.3:64569028-64569047 | MS.gene045681:intron | 45.0% | |
| TTTGCTGGTGAGTACAACCA+GGG | - | chr4.3:64569395-64569414 | MS.gene045681:intron | 45.0% | |
| ! | ACTTTTGTTGGCATCCTCAC+TGG | + | chr4.3:64568694-64568713 | None:intergenic | 45.0% |
| ! | GAGATACTGTGGTTGCTTTC+GGG | - | chr4.3:64569499-64569518 | MS.gene045681:intron | 45.0% |
| ! | TCCACAAGGAGTTTTCCTAG+TGG | + | chr4.3:64568728-64568747 | None:intergenic | 45.0% |
| !! | GGTGGTTCTAGAGATGTACT+AGG | - | chr4.3:64569520-64569539 | MS.gene045681:intron | 45.0% |
| !! | GTTTGTAGTGACTTGGTTCG+TGG | - | chr4.3:64568637-64568656 | MS.gene045681:intron | 45.0% |
| !!! | TTATGTTTTTTTTTTTTATA+AGG | - | chr4.3:64568552-64568571 | MS.gene045681:intron | 5.0% |
| ACCACTATGAAACCCGGACA+TGG | + | chr4.3:64569020-64569039 | None:intergenic | 50.0% | |
| CACTAGGGGTCTGTTTGGAT+TGG | + | chr4.3:64569980-64569999 | None:intergenic | 50.0% | |
| GGTAACCTCAACTTCGACAC+CGG | + | chr4.3:64570536-64570555 | None:intergenic | 50.0% | |
| GTAACCTCAACTTCGACACC+GGG | + | chr4.3:64570535-64570554 | None:intergenic | 50.0% | |
| TAGTGTCTGTGTCCATGTCC+GGG | - | chr4.3:64569005-64569024 | MS.gene045681:intron | 50.0% | |
| TCCATGTCCGGGTTTCATAG+TGG | - | chr4.3:64569016-64569035 | MS.gene045681:intron | 50.0% | |
| TCTTAATCCAACAGTCGCCG+TGG | + | chr4.3:64569048-64569067 | None:intergenic | 50.0% | |
| ! | ATACTGTGGTTGCTTTCGGG+TGG | - | chr4.3:64569502-64569521 | MS.gene045681:intron | 50.0% |
| ! | GTGCTGACCACTATGAAACC+CGG | + | chr4.3:64569026-64569045 | None:intergenic | 50.0% |
| ! | GTTTGCTGGTGAGTACAACC+AGG | - | chr4.3:64569394-64569413 | MS.gene045681:intron | 50.0% |
| !! | GCCTGGTTTGGAAGAATCTC+AGG | - | chr4.3:64568444-64568463 | MS.gene045681:CDS | 50.0% |
| !! | TGACTTGGTTCGTGGTGCTA+AGG | - | chr4.3:64568645-64568664 | MS.gene045681:intron | 50.0% |
| TTAGGGTGAAGGGACCAGTG+AGG | - | chr4.3:64568677-64568696 | MS.gene045681:intron | 55.0% | |
| ! | TGAACCCGGTGTCGAAGTTG+AGG | - | chr4.3:64570528-64570547 | MS.gene045681:CDS | 55.0% |
| TCACGGGACGCGAGTTCGAT+CGG | + | chr4.3:64568933-64568952 | None:intergenic | 60.0% | |
| GTCAGCACCACGGCGACTGT+TGG | - | chr4.3:64569038-64569057 | MS.gene045681:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 64568415 | 64570570 | 64568415 | ID=MS.gene045681 |
| chr4.3 | mRNA | 64568415 | 64570570 | 64568415 | ID=MS.gene045681.t1;Parent=MS.gene045681 |
| chr4.3 | exon | 64570459 | 64570570 | 64570459 | ID=MS.gene045681.t1.exon1;Parent=MS.gene045681.t1 |
| chr4.3 | CDS | 64570459 | 64570570 | 64570459 | ID=cds.MS.gene045681.t1;Parent=MS.gene045681.t1 |
| chr4.3 | exon | 64570234 | 64570347 | 64570234 | ID=MS.gene045681.t1.exon2;Parent=MS.gene045681.t1 |
| chr4.3 | CDS | 64570234 | 64570347 | 64570234 | ID=cds.MS.gene045681.t1;Parent=MS.gene045681.t1 |
| chr4.3 | exon | 64568415 | 64568557 | 64568415 | ID=MS.gene045681.t1.exon3;Parent=MS.gene045681.t1 |
| chr4.3 | CDS | 64568415 | 64568557 | 64568415 | ID=cds.MS.gene045681.t1;Parent=MS.gene045681.t1 |
| Gene Sequence |
| Protein sequence |
