AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene068750

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068750.t1 MTR_2g085090 98.374 123 2 0 1 123 1 123 3.78e-87 249
MS.gene068750.t1 MTR_1g091057 98.374 123 2 0 1 123 1 123 3.78e-87 249
MS.gene068750.t1 MTR_0157s0070 95.833 120 5 0 4 123 3 122 6.99e-83 238
MS.gene068750.t1 MTR_4g034030 95.833 120 5 0 4 123 3 122 6.99e-83 238
MS.gene068750.t1 MTR_7g092720 95.833 120 5 0 4 123 3 122 1.07e-82 238
MS.gene068750.t1 MTR_4g034030 98.824 85 1 0 39 123 3 87 2.98e-58 175
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068750.t1 AT3G47370 86.667 120 16 0 4 123 3 122 2.69e-73 214
MS.gene068750.t1 AT3G47370 86.667 120 16 0 4 123 3 122 2.69e-73 214
MS.gene068750.t1 AT3G47370 86.667 120 16 0 4 123 3 122 2.69e-73 214
MS.gene068750.t1 AT5G62300 85.484 124 17 1 1 123 1 124 3.01e-73 214
MS.gene068750.t1 AT5G62300 85.484 124 17 1 1 123 1 124 3.01e-73 214
MS.gene068750.t1 AT3G45030 85.484 124 17 1 1 123 1 124 3.01e-73 214

Find 45 sgRNAs with CRISPR-Local

Find 165 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCCACCCTTCTCAAGATTT+TGG 0.155224 2.3:-18508004 None:intergenic
GTGCTAAGGACAAGCATCTT+AGG 0.246369 2.3:+18508146 MS.gene068750:CDS
TCCTCCAAACCTACCTTTGT+TGG 0.379765 2.3:-18507930 None:intergenic
AAAACCAACAAAGGTAGGTT+TGG 0.397934 2.3:+18507926 MS.gene068750:CDS
CTGTTTCAGGTACCAACACT+TGG 0.402075 2.3:+18509975 MS.gene068750:intron
GTAATCTGCTTAACAACGTC+TGG 0.415218 2.3:-18510049 None:intergenic
TTGAACTCCGTGTGCACAAG+AGG 0.436894 2.3:+18510005 MS.gene068750:CDS
GGTAGGTTTGGAGGATTCTC+AGG 0.443866 2.3:+18507938 MS.gene068750:CDS
AGGAGCAGATCCACAAGATT+AGG 0.453895 2.3:+18507958 MS.gene068750:CDS
GTTGTTAGTTTGTGCTGACT+TGG 0.466618 2.3:+18508117 MS.gene068750:intron
AGGTTCTTCACATTACTACT+AGG 0.481361 2.3:+18508197 MS.gene068750:CDS
GTAATGTGAAGAACCTTAGT+AGG 0.488319 2.3:-18508190 None:intergenic
ACCAGGTTCGATGGTGATAG+AGG 0.489959 2.3:-18510071 None:intergenic
CGAACCTGGTGTCGAGGTTG+AGG 0.496706 2.3:+18510084 MS.gene068750:CDS
ACCAACAAAGGTAGGTTTGG+AGG 0.499020 2.3:+18507929 MS.gene068750:CDS
CAACGTCTGGGGAACTGTAA+AGG 0.512765 2.3:-18510036 None:intergenic
ACCTGTCAGGATGCCTACTA+AGG 0.514666 2.3:+18508177 MS.gene068750:CDS
ACCTCTATCACCATCGAACC+TGG 0.519945 2.3:+18510070 MS.gene068750:CDS
GTTTGTGCTGACTTGGTTCG+TGG 0.525514 2.3:+18508124 MS.gene068750:intron
GCTATAAAACCAACAAAGGT+AGG 0.526218 2.3:+18507921 MS.gene068750:CDS
TGCTAAGGACAAGCATCTTA+GGG 0.529942 2.3:+18508147 MS.gene068750:CDS
TTAGGGTCAAGGGACCTGTC+AGG 0.530594 2.3:+18508164 MS.gene068750:CDS
AGGAAGACCCCTTGTGGTGA+AGG 0.532764 2.3:+18508217 MS.gene068750:CDS
TAATCTGCTTAACAACGTCT+GGG 0.545211 2.3:-18510048 None:intergenic
TGACTTGGTTCGTGGTGCTA+AGG 0.550440 2.3:+18508132 MS.gene068750:CDS
AACCTCGACACCAGGTTCGA+TGG 0.552766 2.3:-18510080 None:intergenic
ACCTTAGTAGGCATCCTGAC+AGG 0.553261 2.3:-18508178 None:intergenic
GTCACCTCAACCTCGACACC+AGG 0.559183 2.3:-18510088 None:intergenic
CACCATCGAACCTGGTGTCG+AGG 0.559437 2.3:+18510078 MS.gene068750:CDS
GGACAAGCATCTTAGGGTCA+AGG 0.562678 2.3:+18508153 MS.gene068750:CDS
CAATGACCCTCTTGTGCACA+CGG 0.568374 2.3:-18510012 None:intergenic
AGAGAGTGATCCTAATCTTG+TGG 0.570336 2.3:-18507968 None:intergenic
GACAAGCATCTTAGGGTCAA+GGG 0.571703 2.3:+18508154 MS.gene068750:CDS
GCACGTCCAAAATCTTGAGA+AGG 0.572845 2.3:+18507998 MS.gene068750:CDS
TTCAAATCTATCCCAAGTGT+TGG 0.578144 2.3:-18509987 None:intergenic
CACGTCCAAAATCTTGAGAA+GGG 0.584353 2.3:+18507999 MS.gene068750:CDS
TGCTGCTATAAAACCAACAA+AGG 0.587951 2.3:+18507917 MS.gene068750:CDS
TGTTTCAGGTACCAACACTT+GGG 0.590556 2.3:+18509976 MS.gene068750:intron
TGTAATACCTTCACCACAAG+GGG 0.605448 2.3:-18508224 None:intergenic
TCAAGATCAAGCGTCAGCAA+TGG 0.636081 2.3:-18510110 None:intergenic
AATGTAATACCTTCACCACA+AGG 0.648603 2.3:-18508226 None:intergenic
ATGTAATACCTTCACCACAA+GGG 0.650245 2.3:-18508225 None:intergenic
TGAACTCCGTGTGCACAAGA+GGG 0.668892 2.3:+18510006 MS.gene068750:CDS
ACTACTAGGAAGACCCCTTG+TGG 0.691181 2.3:+18508211 MS.gene068750:CDS
AATCTGCTTAACAACGTCTG+GGG 0.738536 2.3:-18510047 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTACTATAAAAATAGTTTA+TGG - chr2.3:18509067-18509086 None:intergenic 10.0%
!!! AAGATTATGAATTATATTTT+GGG - chr2.3:18509746-18509765 None:intergenic 10.0%
!! ATAATTTATGATATATTCAC+AGG + chr2.3:18508600-18508619 MS.gene068750:intron 15.0%
!! TATGGATTTAATGATTTATA+GGG + chr2.3:18508559-18508578 MS.gene068750:intron 15.0%
!! TTATGGATTTAATGATTTAT+AGG + chr2.3:18508558-18508577 MS.gene068750:intron 15.0%
!!! AAGTTAAACTGTTTTTTTTT+TGG + chr2.3:18509098-18509117 MS.gene068750:intron 15.0%
!!! AGATTATGAATTATATTTTG+GGG - chr2.3:18509745-18509764 None:intergenic 15.0%
!!! CAAGATTATGAATTATATTT+TGG - chr2.3:18509747-18509766 None:intergenic 15.0%
!!! TAAAATTTGTTTTTATTGTG+TGG + chr2.3:18508270-18508289 MS.gene068750:intron 15.0%
!!! TTTTATCTCATTTTTTTGAA+TGG + chr2.3:18509473-18509492 MS.gene068750:intron 15.0%
!! AATGTAATGAAAGTAGTAAT+AGG + chr2.3:18508493-18508512 MS.gene068750:intron 20.0%
!! ATGATAAGTTTCATGATAAT+TGG - chr2.3:18508913-18508932 None:intergenic 20.0%
!! GAGATAAAAATTTAGACTAT+GGG - chr2.3:18509462-18509481 None:intergenic 20.0%
!! TGAGATAAAAATTTAGACTA+TGG - chr2.3:18509463-18509482 None:intergenic 20.0%
!! TTTGTGTAGTTATTTATACA+TGG + chr2.3:18509614-18509633 MS.gene068750:intron 20.0%
!!! TCACTAAATATGCTTATTTT+TGG + chr2.3:18508077-18508096 MS.gene068750:intron 20.0%
!!! TTTTCTCAAAAATAGCAAAA+AGG + chr2.3:18508741-18508760 MS.gene068750:intron 20.0%
! AAATGGTTTCACAAAATTCA+TGG + chr2.3:18508432-18508451 MS.gene068750:intron 25.0%
! GGAAAAACACAATTAAAATC+AGG - chr2.3:18508369-18508388 None:intergenic 25.0%
! GTTTGTAGATAGAACAAATA+GGG + chr2.3:18508967-18508986 MS.gene068750:intron 25.0%
! TGTTTGTAGATAGAACAAAT+AGG + chr2.3:18508966-18508985 MS.gene068750:intron 25.0%
!! AAAACAGTTTAACTTTAACC+AGG - chr2.3:18509281-18509300 None:intergenic 25.0%
!! AGCTATTGAAAGAGTTTTTA+TGG + chr2.3:18508541-18508560 MS.gene068750:intron 25.0%
!!! TTTGAATGGTATTTGCTATT+TGG + chr2.3:18509487-18509506 MS.gene068750:intron 25.0%
AAAAAGAAGCAGAACACAAA+AGG - chr2.3:18508306-18508325 None:intergenic 30.0%
AATAAGATCCTTATCCAAAC+AGG - chr2.3:18508993-18509012 None:intergenic 30.0%
ACTGAAAAATACAACTAGAC+AGG - chr2.3:18508772-18508791 None:intergenic 30.0%
ACTTCAAAAATCAAGTCAGA+AGG - chr2.3:18509890-18509909 None:intergenic 30.0%
GATTTAATGACAGTAGTGAT+AGG + chr2.3:18508456-18508475 MS.gene068750:intron 30.0%
GGAAATTATATTCCTTGACT+TGG - chr2.3:18509795-18509814 None:intergenic 30.0%
TAGACTTGCAAAACACAAAA+AGG - chr2.3:18508813-18508832 None:intergenic 30.0%
TGAAACTTATCATTAGTGTG+AGG + chr2.3:18508920-18508939 MS.gene068750:intron 30.0%
! AAGTATTGTGTTCAATGTGT+AGG + chr2.3:18509906-18509925 MS.gene068750:intron 30.0%
!! AAATCATCTCTAGAAGCATT+TGG - chr2.3:18508681-18508700 None:intergenic 30.0%
!! GTTGTTTTCATGAACTATCT+TGG + chr2.3:18509315-18509334 MS.gene068750:intron 30.0%
!! TTCTATCTCTTCAGTTTTAG+TGG + chr2.3:18508847-18508866 MS.gene068750:intron 30.0%
!!! ATGAATTATATTTTGGGGCT+TGG - chr2.3:18509740-18509759 None:intergenic 30.0%
!!! TGAATTATATTTTGGGGCTT+GGG - chr2.3:18509739-18509758 None:intergenic 30.0%
!!! TTTTTTTTTGGCTTTCACAC+TGG + chr2.3:18509110-18509129 MS.gene068750:intron 30.0%
AAAACCAACAAAGGTAGGTT+TGG + chr2.3:18507926-18507945 MS.gene068750:CDS 35.0%
AACTCTTTCAATAGCTCACT+AGG - chr2.3:18508537-18508556 None:intergenic 35.0%
AATGTAATACCTTCACCACA+AGG - chr2.3:18508229-18508248 None:intergenic 35.0%
ACTTATCATTAGTGTGAGGA+TGG + chr2.3:18508924-18508943 MS.gene068750:intron 35.0%
ACTTGAATCTGAATCTTCCT+CGG + chr2.3:18509511-18509530 MS.gene068750:intron 35.0%
AGGTTCTTCACATTACTACT+AGG + chr2.3:18508197-18508216 MS.gene068750:CDS 35.0%
ATACAATTCACACCCAATTC+AGG - chr2.3:18509825-18509844 None:intergenic 35.0%
ATCACTTGCACGATAAGAAA+AGG - chr2.3:18509682-18509701 None:intergenic 35.0%
ATGATATATTCACAGGCTGT+TGG + chr2.3:18508607-18508626 MS.gene068750:intron 35.0%
ATGTAATACCTTCACCACAA+GGG - chr2.3:18508228-18508247 None:intergenic 35.0%
CAAAAAGGAAAGAGAAGTCT+AGG - chr2.3:18508798-18508817 None:intergenic 35.0%
CATAAGTTGTGAGACTGTTT+GGG - chr2.3:18509403-18509422 None:intergenic 35.0%
CATGTTATGTGGAGGTTAAA+TGG + chr2.3:18508415-18508434 MS.gene068750:intron 35.0%
CTCAAAAATAGCAAAAAGGC+TGG + chr2.3:18508745-18508764 MS.gene068750:intron 35.0%
CTTATCATTAGTGTGAGGAT+GGG + chr2.3:18508925-18508944 MS.gene068750:intron 35.0%
GAATGCTTCTTGTCTAGTAT+GGG + chr2.3:18509567-18509586 MS.gene068750:intron 35.0%
GCTATAAAACCAACAAAGGT+AGG + chr2.3:18507921-18507940 MS.gene068750:CDS 35.0%
GGCTAACTAACACATATTGT+TGG - chr2.3:18509869-18509888 None:intergenic 35.0%
GGTATCCATAATATAGAGCA+CGG - chr2.3:18508892-18508911 None:intergenic 35.0%
GTAATGTGAAGAACCTTAGT+AGG - chr2.3:18508193-18508212 None:intergenic 35.0%
TAACTTTAACCAGGTTGCTT+GGG - chr2.3:18509272-18509291 None:intergenic 35.0%
TAATCTGCTTAACAACGTCT+GGG - chr2.3:18510051-18510070 None:intergenic 35.0%
TAGTGGAAAGATGTTCCATA+TGG + chr2.3:18508864-18508883 MS.gene068750:intron 35.0%
TATAAAGTTAGCTGCAACAG+TGG + chr2.3:18508708-18508727 MS.gene068750:intron 35.0%
TCAAATAAGCCAATCCAAAC+AGG + chr2.3:18509436-18509455 MS.gene068750:intron 35.0%
TGAATGCTTCTTGTCTAGTA+TGG + chr2.3:18509566-18509585 MS.gene068750:intron 35.0%
TGCTGCTATAAAACCAACAA+AGG + chr2.3:18507917-18507936 MS.gene068750:CDS 35.0%
TTAACTTTAACCAGGTTGCT+TGG - chr2.3:18509273-18509292 None:intergenic 35.0%
TTCAAATCTATCCCAAGTGT+TGG - chr2.3:18509990-18510009 None:intergenic 35.0%
! ATGGTTTGTGAGAATTCACA+TGG + chr2.3:18509713-18509732 MS.gene068750:intron 35.0%
!! TATATTCCTTGACTTGGAAC+AGG - chr2.3:18509789-18509808 None:intergenic 35.0%
AAATAGGGCCTGTTTGGATA+AGG + chr2.3:18508982-18509001 MS.gene068750:intron 40.0%
AACCTCCACATAACATGCAA+TGG - chr2.3:18508412-18508431 None:intergenic 40.0%
AATCTGCTTAACAACGTCTG+GGG - chr2.3:18510050-18510069 None:intergenic 40.0%
AGAGAGTGATCCTAATCTTG+TGG - chr2.3:18507971-18507990 None:intergenic 40.0%
ATAGCACAAACAATTAGCCG+AGG - chr2.3:18509531-18509550 None:intergenic 40.0%
ATGCAATGGAGTAGGATTGA+AGG - chr2.3:18508398-18508417 None:intergenic 40.0%
ATTTAGACTATGGGCCTGTT+TGG - chr2.3:18509453-18509472 None:intergenic 40.0%
CAAGTGATTCTATGTGTGGA+TGG + chr2.3:18509694-18509713 MS.gene068750:intron 40.0%
CACATAACATGCAATGGAGT+AGG - chr2.3:18508406-18508425 None:intergenic 40.0%
CACGTCCAAAATCTTGAGAA+GGG + chr2.3:18507999-18508018 MS.gene068750:CDS 40.0%
CTACTCCATTGCATGTTATG+TGG + chr2.3:18508404-18508423 MS.gene068750:intron 40.0%
GCATAAGTTGTGAGACTGTT+TGG - chr2.3:18509404-18509423 None:intergenic 40.0%
GCTATTCTCTTCTTTGTGTG+TGG + chr2.3:18509636-18509655 MS.gene068750:intron 40.0%
GCTTATTTGAGCTTGTCTAC+TGG - chr2.3:18509426-18509445 None:intergenic 40.0%
GTAATCTGCTTAACAACGTC+TGG - chr2.3:18510052-18510071 None:intergenic 40.0%
TAGAACAAATAGGGCCTGTT+TGG + chr2.3:18508976-18508995 MS.gene068750:intron 40.0%
TATGAGCTTCCTTCTGTTTC+AGG + chr2.3:18509962-18509981 MS.gene068750:intron 40.0%
TCCAAAATCTTGAGAAGGGT+GGG + chr2.3:18508003-18508022 MS.gene068750:intron 40.0%
TGCTAAGGACAAGCATCTTA+GGG + chr2.3:18508147-18508166 MS.gene068750:CDS 40.0%
TGTAATACCTTCACCACAAG+GGG - chr2.3:18508227-18508246 None:intergenic 40.0%
! AAGATTTTGGACGTGCTTAG+AGG - chr2.3:18507994-18508013 None:intergenic 40.0%
! TGTTTCAGGTACCAACACTT+GGG + chr2.3:18509976-18509995 MS.gene068750:intron 40.0%
!! GTCTAGTATGGGTTGGAAAT+TGG + chr2.3:18509578-18509597 MS.gene068750:intron 40.0%
!! GTTGTTAGTTTGTGCTGACT+TGG + chr2.3:18508117-18508136 MS.gene068750:intron 40.0%
AATACCAGGTTCGATTCCCA+GGG - chr2.3:18509209-18509228 None:intergenic 45.0%
ACCAACAAAGGTAGGTTTGG+AGG + chr2.3:18507929-18507948 MS.gene068750:CDS 45.0%
AGGAGCAGATCCACAAGATT+AGG + chr2.3:18507958-18507977 MS.gene068750:CDS 45.0%
ATATAGAGCACGGCACCATA+TGG - chr2.3:18508882-18508901 None:intergenic 45.0%
ATTTCCCATGCCACCTGAAT+TGG + chr2.3:18509809-18509828 MS.gene068750:intron 45.0%
CAATTCACACCCAATTCAGG+TGG - chr2.3:18509822-18509841 None:intergenic 45.0%
CGTGCAAGTGATTCTATGTG+TGG + chr2.3:18509690-18509709 MS.gene068750:intron 45.0%
CTCCATTGCATGTTATGTGG+AGG + chr2.3:18508407-18508426 MS.gene068750:intron 45.0%
GACAAGCATCTTAGGGTCAA+GGG + chr2.3:18508154-18508173 MS.gene068750:CDS 45.0%
GAGTAGGATTGAAGGACAAG+CGG - chr2.3:18508390-18508409 None:intergenic 45.0%
GCACGTCCAAAATCTTGAGA+AGG + chr2.3:18507998-18508017 MS.gene068750:CDS 45.0%
GCTTCTTGTCTAGTATGGGT+TGG + chr2.3:18509571-18509590 MS.gene068750:intron 45.0%
GTCCAAAATCTTGAGAAGGG+TGG + chr2.3:18508002-18508021 MS.gene068750:intron 45.0%
GTGCTAAGGACAAGCATCTT+AGG + chr2.3:18508146-18508165 MS.gene068750:CDS 45.0%
TCCTCCAAACCTACCTTTGT+TGG - chr2.3:18507933-18507952 None:intergenic 45.0%
TCTGATCCTGTTCCAAGTCA+AGG + chr2.3:18509780-18509799 MS.gene068750:intron 45.0%
TTTCCCATGCCACCTGAATT+GGG + chr2.3:18509810-18509829 MS.gene068750:intron 45.0%
! ACCCACCCTTCTCAAGATTT+TGG - chr2.3:18508007-18508026 None:intergenic 45.0%
! CTGTTTCAGGTACCAACACT+TGG + chr2.3:18509975-18509994 MS.gene068750:intron 45.0%
! GTGTTGGTACCTGAAACAGA+AGG - chr2.3:18509974-18509993 None:intergenic 45.0%
!! TGGTGCCGTGCTCTATATTA+TGG + chr2.3:18508884-18508903 MS.gene068750:intron 45.0%
ACACCCAATTCAGGTGGCAT+GGG - chr2.3:18509816-18509835 None:intergenic 50.0%
ACCAGGTTCGATGGTGATAG+AGG - chr2.3:18510074-18510093 None:intergenic 50.0%
ACCTCTATCACCATCGAACC+TGG + chr2.3:18510070-18510089 MS.gene068750:CDS 50.0%
ACCTGTCAGGATGCCTACTA+AGG + chr2.3:18508177-18508196 MS.gene068750:CDS 50.0%
ACCTTAGTAGGCATCCTGAC+AGG - chr2.3:18508181-18508200 None:intergenic 50.0%
ACTACTAGGAAGACCCCTTG+TGG + chr2.3:18508211-18508230 MS.gene068750:CDS 50.0%
ATACCAGGTTCGATTCCCAG+GGG - chr2.3:18509208-18509227 None:intergenic 50.0%
ATTAGTCGCCCACCTTTGGT+GGG - chr2.3:18509143-18509162 None:intergenic 50.0%
CAACGTCTGGGGAACTGTAA+AGG - chr2.3:18510039-18510058 None:intergenic 50.0%
CAATGACCCTCTTGTGCACA+CGG - chr2.3:18510015-18510034 None:intergenic 50.0%
GAATACCAGGTTCGATTCCC+AGG - chr2.3:18509210-18509229 None:intergenic 50.0%
GAATCGAACCTGGTATTCCC+CGG + chr2.3:18509212-18509231 MS.gene068750:intron 50.0%
GACTATGGGCCTGTTTGGAT+TGG - chr2.3:18509448-18509467 None:intergenic 50.0%
GGACAAGCATCTTAGGGTCA+AGG + chr2.3:18508153-18508172 MS.gene068750:CDS 50.0%
GGTAGGTTTGGAGGATTCTC+AGG + chr2.3:18507938-18507957 MS.gene068750:CDS 50.0%
TGAACTCCGTGTGCACAAGA+GGG + chr2.3:18510006-18510025 MS.gene068750:CDS 50.0%
TTGAACTCCGTGTGCACAAG+AGG + chr2.3:18510005-18510024 MS.gene068750:CDS 50.0%
!! GTTTGTGCTGACTTGGTTCG+TGG + chr2.3:18508124-18508143 MS.gene068750:intron 50.0%
!! TGACTTGGTTCGTGGTGCTA+AGG + chr2.3:18508132-18508151 MS.gene068750:CDS 50.0%
AACCTCGACACCAGGTTCGA+TGG - chr2.3:18510083-18510102 None:intergenic 55.0%
AGGAAGACCCCTTGTGGTGA+AGG + chr2.3:18508217-18508236 MS.gene068750:CDS 55.0%
CACACCCAATTCAGGTGGCA+TGG - chr2.3:18509817-18509836 None:intergenic 55.0%
CCAAAGGTGGGCGACTAATC+TGG + chr2.3:18509144-18509163 MS.gene068750:intron 55.0%
CTCCTTCCAAGGACGTATCC+GGG - chr2.3:18509233-18509252 None:intergenic 55.0%
GCTCCTTCCAAGGACGTATC+CGG - chr2.3:18509234-18509253 None:intergenic 55.0%
GTATTCCCCGGATACGTCCT+TGG + chr2.3:18509224-18509243 MS.gene068750:intron 55.0%
GTTTCCGACCCACCAAAGGT+GGG + chr2.3:18509132-18509151 MS.gene068750:intron 55.0%
TACCAGGTTCGATTCCCAGG+GGG - chr2.3:18509207-18509226 None:intergenic 55.0%
TCCTTCCAAGGACGTATCCG+GGG - chr2.3:18509232-18509251 None:intergenic 55.0%
TTAGGGTCAAGGGACCTGTC+AGG + chr2.3:18508164-18508183 MS.gene068750:CDS 55.0%
! ACTGGTTTCCGACCCACCAA+AGG + chr2.3:18509128-18509147 MS.gene068750:intron 55.0%
! CCAGATTAGTCGCCCACCTT+TGG - chr2.3:18509147-18509166 None:intergenic 55.0%
! CTAATCTGGCTCGTGCGTAG+AGG + chr2.3:18509158-18509177 MS.gene068750:intron 55.0%
! GATTAGTCGCCCACCTTTGG+TGG - chr2.3:18509144-18509163 None:intergenic 55.0%
GGACGTATCCGGGGAATACC+AGG - chr2.3:18509223-18509242 None:intergenic 60.0%
GGTTTCCGACCCACCAAAGG+TGG + chr2.3:18509131-18509150 MS.gene068750:intron 60.0%
GTCACCTCAACCTCGACACC+AGG - chr2.3:18510091-18510110 None:intergenic 60.0%
GTGGCAAGGAGCTCCTTCCA+AGG - chr2.3:18509244-18509263 None:intergenic 60.0%
TCCCCGGATACGTCCTTGGA+AGG + chr2.3:18509228-18509247 MS.gene068750:intron 60.0%
TGGAAGGAGCTCCTTGCCAC+TGG + chr2.3:18509244-18509263 MS.gene068750:intron 60.0%
TTCCCAGGGGGAACAACGCT+TGG - chr2.3:18509195-18509214 None:intergenic 60.0%
TTCCCCCTGGGAATCGAACC+TGG + chr2.3:18509202-18509221 MS.gene068750:intron 60.0%
TTGCTTGGGCTCCAGTGGCA+AGG - chr2.3:18509258-18509277 None:intergenic 60.0%
! CACCATCGAACCTGGTGTCG+AGG + chr2.3:18510078-18510097 MS.gene068750:CDS 60.0%
! CGAACCTGGTGTCGAGGTTG+AGG + chr2.3:18510084-18510103 MS.gene068750:CDS 60.0%
! TGCCAAGCGTTGTTCCCCCT+GGG + chr2.3:18509190-18509209 MS.gene068750:intron 60.0%
CCACTGGAGCCCAAGCAACC+TGG + chr2.3:18509260-18509279 MS.gene068750:intron 65.0%
CCAGGTTGCTTGGGCTCCAG+TGG - chr2.3:18509263-18509282 None:intergenic 65.0%
! CTGCCAAGCGTTGTTCCCCC+TGG + chr2.3:18509189-18509208 MS.gene068750:intron 65.0%
! GTCGCCCACCTTTGGTGGGT+CGG - chr2.3:18509139-18509158 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 18507906 18510126 18507906 ID=MS.gene068750
chr2.3 mRNA 18507906 18510126 18507906 ID=MS.gene068750.t1;Parent=MS.gene068750
chr2.3 exon 18507906 18508020 18507906 ID=MS.gene068750.t1.exon1;Parent=MS.gene068750.t1
chr2.3 CDS 18507906 18508020 18507906 ID=cds.MS.gene068750.t1;Parent=MS.gene068750.t1
chr2.3 exon 18508125 18508238 18508125 ID=MS.gene068750.t1.exon2;Parent=MS.gene068750.t1
chr2.3 CDS 18508125 18508238 18508125 ID=cds.MS.gene068750.t1;Parent=MS.gene068750.t1
chr2.3 exon 18509984 18510126 18509984 ID=MS.gene068750.t1.exon3;Parent=MS.gene068750.t1
chr2.3 CDS 18509984 18510126 18509984 ID=cds.MS.gene068750.t1;Parent=MS.gene068750.t1
Gene Sequence

>MS.gene068750

ATGGCGACTTTTGCTGCTATAAAACCAACAAAGGTAGGTTTGGAGGATTCTCAGGAGCAGATCCACAAGATTAGGATCACTCTCTCCTCTAAGCACGTCCAAAATCTTGAGAAGGGTGGGTATTTTATACTATTTGCTCAGTTAAAGTTCATGTCTTTATGTTTGTTGCTATCACTAAATATGCTTATTTTTGGATTTTTATTGCTTTGTTGTTGTTAGTTTGTGCTGACTTGGTTCGTGGTGCTAAGGACAAGCATCTTAGGGTCAAGGGACCTGTCAGGATGCCTACTAAGGTTCTTCACATTACTACTAGGAAGACCCCTTGTGGTGAAGGTATTACATTTATTTACTTTTGCTCTATAATTAAAATTTGTTTTTATTGTGTGGTTAGCTTGTTCCTTTTGTGTTCTGCTTCTTTTTCTGTTCACGTTGCAATTACTTTGCATGCTGTATGCACTTTCCTGATTTTAATTGTGTTTTTCCGCTTGTCCTTCAATCCTACTCCATTGCATGTTATGTGGAGGTTAAATGGTTTCACAAAATTCATGGTGATTTAATGACAGTAGTGATAGGAGCGAATTCGTGATAATGTAATGAAAGTAGTAATAGGCAACAAAATGATAATTATCCTAGTGAGCTATTGAAAGAGTTTTTATGGATTTAATGATTTATAGGGTTACACTTGATTATACACATAATTTATGATATATTCACAGGCTGTTGGCACTTATAATTGAGTGTGTAATAATAATCATATAGTTAAGTTGCATATCCAAATGCTTCTAGAGATGATTTTTGCTTATATAAAGTTAGCTGCAACAGTGGATTATGTGAATTTTCTCAAAAATAGCAAAAAGGCTGGTCCTGTCTAGTTGTATTTTTCAGTGATCCTAGACTTCTCTTTCCTTTTTGTGTTTTGCAAGTCTATCATTATATTGCTCTTCTATCTCTTCAGTTTTAGTGGAAAGATGTTCCATATGGTGCCGTGCTCTATATTATGGATACCAATTATCATGAAACTTATCATTAGTGTGAGGATGGGTCTTTTCAGTTTTCAAACTGTTTGTAGATAGAACAAATAGGGCCTGTTTGGATAAGGATCTTATTTGCAGCTTATAGCACAAGCGCTTATCGTGATAATCGCTTATGTATAAGTTTCCATAAACTATTTTTATAGTAAATGATAACATAAAAGTTAAACTGTTTTTTTTTTGGCTTTCACACTGGTTTCCGACCCACCAAAGGTGGGCGACTAATCTGGCTCGTGCGTAGAGGCATGCGCACTGCCAAGCGTTGTTCCCCCTGGGAATCGAACCTGGTATTCCCCGGATACGTCCTTGGAAGGAGCTCCTTGCCACTGGAGCCCAAGCAACCTGGTTAAAGTTAAACTGTTTTTGTATATACTATAAGTTGTTTTCATGAACTATCTTGGAGAACTTATAAAAATAAGCTGAAAAAAGCTTATTAAAATGTCAAGCTATTTATAAAAGTTCTCCCAAACAGTCTCACAACTTATGCCAGTAGACAAGCTCAAATAAGCCAATCCAAACAGGCCCATAGTCTAAATTTTTATCTCATTTTTTTGAATGGTATTTGCTATTTGGCACTTGAATCTGAATCTTCCTCGGCTAATTGTTTGTGCTATAAAGTGACTGTTTTATGAATGCTTCTTGTCTAGTATGGGTTGGAAATTGGAATTCATTCATGCTTTGTGTAGTTATTTATACATGGCTATTCTCTTCTTTGTGTGTGGTTTGAATGCGTTATATATTTCCTTTTCTTATCGTGCAAGTGATTCTATGTGTGGATGGTTTGTGAGAATTCACATGGCCCAAGCCCCAAAATATAATTCATAATCTTGAAAAGTGTAGTTTTCTGATCCTGTTCCAAGTCAAGGAATATAATTTCCCATGCCACCTGAATTGGGTGTGAATTGTATGCTGCTAATGTTTCTTATTAACCAACAATATGTGTTAGTTAGCCTTCTGACTTGATTTTTGAAGTATTGTGTTCAATGTGTAGGCTTTCTGAATGAACGTTATGAACTGCTTGTGTTTATGAGCTTCCTTCTGTTTCAGGTACCAACACTTGGGATAGATTTGAACTCCGTGTGCACAAGAGGGTCATTGACCTTTACAGTTCCCCAGACGTTGTTAAGCAGATTACCTCTATCACCATCGAACCTGGTGTCGAGGTTGAGGTGACCATTGCTGACGCTTGA
Protein sequence

>MS.gene068750.t1

MATFAAIKPTKVGLEDSQEQIHKIRITLSSKHVQNLEKVCADLVRGAKDKHLRVKGPVRMPTKVLHITTRKTPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA