Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049250.t1 | XP_024633621.1 | 86.3 | 248 | 34 | 0 | 26 | 273 | 682 | 929 | 4.70E-97 | 364.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049250.t1 | Q9LVP1 | 52.8 | 252 | 104 | 3 | 24 | 274 | 683 | 920 | 9.3e-54 | 211.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049250.t1 | A0A396IZ64 | 86.3 | 248 | 34 | 0 | 26 | 273 | 682 | 929 | 3.4e-97 | 364.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049250 | MS.gene049251 | 0.895977 | 5.74E-76 | -1.69E-46 |
| MS.gene049250 | MS.gene06375 | 0.90336 | 3.76E-79 | -1.69E-46 |
| MS.gene049250 | MS.gene066026 | 0.804694 | 1.91E-49 | -1.69E-46 |
| MS.gene049250 | MS.gene066359 | 0.804893 | 1.74E-49 | -1.69E-46 |
| MS.gene049250 | MS.gene070253 | 0.810433 | 1.16E-50 | -1.69E-46 |
| MS.gene049250 | MS.gene070800 | 0.803818 | 2.91E-49 | -1.69E-46 |
| MS.gene049250 | MS.gene073277 | 0.810122 | 1.35E-50 | -1.69E-46 |
| MS.gene049250 | MS.gene073280 | 0.802832 | 4.65E-49 | -1.69E-46 |
| MS.gene049250 | MS.gene26109 | 0.809763 | 1.61E-50 | -1.69E-46 |
| MS.gene049250 | MS.gene35711 | 0.802107 | 6.56E-49 | -1.69E-46 |
| MS.gene049250 | MS.gene39911 | 0.802303 | 5.98E-49 | -1.69E-46 |
| MS.gene049250 | MS.gene40915 | 0.868831 | 4.87E-66 | -1.69E-46 |
| MS.gene049250 | MS.gene50576 | 0.800602 | 1.33E-48 | -1.69E-46 |
| MS.gene049250 | MS.gene65431 | 0.80675 | 7.07E-50 | -1.69E-46 |
| MS.gene049250 | MS.gene91781 | 0.801622 | 8.26E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049250.t1 | MTR_3g096640 | 83.206 | 262 | 19 | 1 | 37 | 273 | 693 | 954 | 4.88e-130 | 392 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049250.t1 | AT5G63920 | 49.160 | 238 | 104 | 5 | 37 | 272 | 696 | 918 | 3.17e-62 | 211 |
Find 83 sgRNAs with CRISPR-Local
Find 273 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTGAAACTTGAATTGAATT+AGG | 0.230264 | 3.3:-80170872 | None:intergenic |
| TTGGTTCATTCCAGGATATT+GGG | 0.243430 | 3.3:-80172664 | None:intergenic |
| GTTGGTTCATTCCAGGATAT+TGG | 0.280397 | 3.3:-80172665 | None:intergenic |
| TCCAGGATATTGGGGATTCC+TGG | 0.330018 | 3.3:-80172655 | None:intergenic |
| TAGCACCTTCTGTCAGAAAT+AGG | 0.331034 | 3.3:-80174517 | None:intergenic |
| TGTTCGCACTGTCAAGAAAC+AGG | 0.342940 | 3.3:+80172594 | MS.gene049250:CDS |
| CTTGCCTTGGGTTGGTATGA+TGG | 0.344679 | 3.3:-80172566 | None:intergenic |
| GTTGGTATGATGGGCGTTGC+TGG | 0.346475 | 3.3:-80172514 | None:intergenic |
| GTTGGTATGATGGGCGTTGC+TGG | 0.346475 | 3.3:-80172556 | None:intergenic |
| CCTGGAATGAACCAACAAAA+TGG | 0.357678 | 3.3:+80172672 | MS.gene049250:CDS |
| TTGAATTGAATTAGGTAAAC+AGG | 0.374364 | 3.3:-80170864 | None:intergenic |
| AAGCTACAATGTCAACCATT+TGG | 0.394455 | 3.3:+80170911 | MS.gene049250:CDS |
| TGCGAACAAACTGCTTGCCT+TGG | 0.406548 | 3.3:-80172579 | None:intergenic |
| AGCTACAATGTCAACCATTT+GGG | 0.410703 | 3.3:+80170912 | MS.gene049250:CDS |
| CTAATTGTAGAAAATATTAC+AGG | 0.415349 | 3.3:+80170840 | MS.gene049250:intron |
| AGACATCAGTGTCCACGATT+GGG | 0.417541 | 3.3:-80174577 | None:intergenic |
| TGGCCGTGGATCTCGTGGTA+GGG | 0.422988 | 3.3:+80174441 | MS.gene049250:CDS |
| TTACCTCTGTTACAGAATAT+GGG | 0.428484 | 3.3:+80174336 | MS.gene049250:intron |
| TAGACCTTGGGTTGGTATGA+TGG | 0.436659 | 3.3:-80172524 | None:intergenic |
| GCATCCAACCGTGGTCGAAA+TGG | 0.452609 | 3.3:+80174418 | MS.gene049250:CDS |
| GTGGCCGTGGATCTCGTGGT+AGG | 0.459589 | 3.3:+80174440 | MS.gene049250:CDS |
| CTGGTTGATGCAGTAGACCT+TGG | 0.462492 | 3.3:-80172537 | None:intergenic |
| TTTCGACCACGGTTGGATGC+TGG | 0.465860 | 3.3:-80174415 | None:intergenic |
| TGGTTGATGCAGTAGACCTT+GGG | 0.471981 | 3.3:-80172536 | None:intergenic |
| ATCTAGGATGTTTGATAGAG+TGG | 0.473021 | 3.3:+80170617 | None:intergenic |
| GCGAACAAACTGCTTGCCTT+GGG | 0.482226 | 3.3:-80172578 | None:intergenic |
| GAGACATCAGTGTCCACGAT+TGG | 0.488925 | 3.3:-80174578 | None:intergenic |
| TGTTTGATAGAGTGGATTTG+TGG | 0.491695 | 3.3:+80170625 | MS.gene049250:CDS |
| TTGCCTTGGGTTGGTATGAT+GGG | 0.492759 | 3.3:-80172565 | None:intergenic |
| ATGAGATGATGTCCAACATT+GGG | 0.495260 | 3.3:+80170682 | MS.gene049250:CDS |
| CTTCACAGACTCGACGCTCC+AGG | 0.496741 | 3.3:+80172637 | MS.gene049250:CDS |
| GGCCGTGGATCTCGTGGTAG+GGG | 0.497650 | 3.3:+80174442 | MS.gene049250:CDS |
| GGTACCGGCTCCCGCATGCC+AGG | 0.500894 | 3.3:+80171322 | MS.gene049250:CDS |
| CGTGGTCGAAATGGTGGCCG+TGG | 0.503890 | 3.3:+80174427 | MS.gene049250:CDS |
| GTTATTATAGGTTGCATTGG+TGG | 0.504357 | 3.3:+80171262 | MS.gene049250:intron |
| GTTTGATAGAGTGGATTTGT+GGG | 0.505769 | 3.3:+80170626 | MS.gene049250:CDS |
| ATGGATCTAATTCTTCTAAC+GGG | 0.507140 | 3.3:+80174470 | MS.gene049250:CDS |
| AAGACATGCACCTACCCAAA+TGG | 0.513721 | 3.3:-80170926 | None:intergenic |
| GCCACCATTTCGACCACGGT+TGG | 0.515814 | 3.3:-80174422 | None:intergenic |
| TTCTACGCATGTCTAACAAA+GGG | 0.516402 | 3.3:+80174006 | MS.gene049250:CDS |
| AGACCTTGGGTTGGTATGAT+GGG | 0.517932 | 3.3:-80172523 | None:intergenic |
| TCCAGGAATCCCCAATATCC+TGG | 0.519396 | 3.3:+80172654 | MS.gene049250:CDS |
| TGTGTTATTATAGGTTGCAT+TGG | 0.529811 | 3.3:+80171259 | MS.gene049250:intron |
| TGGTTCATTCCAGGATATTG+GGG | 0.530170 | 3.3:-80172663 | None:intergenic |
| CAGACCTGGCATGCGGGAGC+CGG | 0.534574 | 3.3:-80171326 | None:intergenic |
| ACAAACTGCTTGCCTTGGGT+TGG | 0.544791 | 3.3:-80172574 | None:intergenic |
| TCTGTTGCATGCAGCTCGTG+TGG | 0.545763 | 3.3:+80173931 | MS.gene049250:CDS |
| TTCATACAGACCTGGCATGC+GGG | 0.547866 | 3.3:-80171332 | None:intergenic |
| GACATCAGTGTCCACGATTG+GGG | 0.551070 | 3.3:-80174576 | None:intergenic |
| CATTGTGCTAGTCCCAATGT+TGG | 0.567991 | 3.3:-80170694 | None:intergenic |
| GATGAACTCAACAATGGCAG+TGG | 0.568984 | 3.3:+80174361 | MS.gene049250:CDS |
| TTGACAGAAATATGTGGTAC+CGG | 0.572024 | 3.3:+80171307 | MS.gene049250:CDS |
| GGGACATTCGTGTCAGCCAC+TGG | 0.573475 | 3.3:+80174490 | MS.gene049250:CDS |
| GAACTCAACAATGGCAGTGG+AGG | 0.578224 | 3.3:+80174364 | MS.gene049250:CDS |
| AATGGATCTAATTCTTCTAA+CGG | 0.582931 | 3.3:+80174469 | MS.gene049250:CDS |
| GCTAATGTTTGCCCCAATCG+TGG | 0.587698 | 3.3:+80174565 | MS.gene049250:CDS |
| TCCAACCGTGGTCGAAATGG+TGG | 0.588844 | 3.3:+80174421 | MS.gene049250:CDS |
| TCTCGTGGTAGGGGTCGCAA+TGG | 0.589769 | 3.3:+80174451 | MS.gene049250:CDS |
| AATGAGATGATGTCCAACAT+TGG | 0.592518 | 3.3:+80170681 | MS.gene049250:CDS |
| CAAACATTAGCAAAGTGAGA+TGG | 0.592978 | 3.3:-80174553 | None:intergenic |
| CTGGAGCGTCGAGTCTGTGA+AGG | 0.596551 | 3.3:-80172636 | None:intergenic |
| GTGATCCTATTTCTGACAGA+AGG | 0.607092 | 3.3:+80174512 | MS.gene049250:CDS |
| CACGGCCACCATTTCGACCA+CGG | 0.611148 | 3.3:-80174426 | None:intergenic |
| TGGTTGACATTGTAGCTTGG+TGG | 0.612034 | 3.3:-80170906 | None:intergenic |
| GTTCTACGCATGTCTAACAA+AGG | 0.614821 | 3.3:+80174005 | MS.gene049250:CDS |
| AATGGTGGCCGTGGATCTCG+TGG | 0.616242 | 3.3:+80174436 | MS.gene049250:CDS |
| TTTGCAATTCGCAAAACACA+CGG | 0.618750 | 3.3:-80173958 | None:intergenic |
| TGATGCAGTAGACCTTGGGT+TGG | 0.627683 | 3.3:-80172532 | None:intergenic |
| TGATAGAGTGGATTTGTGGG+AGG | 0.629507 | 3.3:+80170629 | MS.gene049250:CDS |
| GACCCCTACCACGAGATCCA+CGG | 0.633791 | 3.3:-80174444 | None:intergenic |
| ATTCATACAGACCTGGCATG+CGG | 0.637245 | 3.3:-80171333 | None:intergenic |
| AAATGGTTGACATTGTAGCT+TGG | 0.638777 | 3.3:-80170909 | None:intergenic |
| GTTCGCACTGTCAAGAAACA+GGG | 0.645630 | 3.3:+80172595 | MS.gene049250:CDS |
| GCGTTGCTGGTTGATGCAGT+AGG | 0.654976 | 3.3:-80172501 | None:intergenic |
| ACACAGTTGACAGAAATATG+TGG | 0.656276 | 3.3:+80171301 | MS.gene049250:CDS |
| ACGCCCATCATACCAACCCA+AGG | 0.676042 | 3.3:+80172562 | MS.gene049250:CDS |
| GTCAGAAATAGGATCACCAG+TGG | 0.677928 | 3.3:-80174506 | None:intergenic |
| ACGCCCATCATACCAACCCA+AGG | 0.681750 | 3.3:+80172520 | MS.gene049250:CDS |
| TGGGAGGATGAACTCAACAA+TGG | 0.692966 | 3.3:+80174355 | MS.gene049250:CDS |
| CCTCTGTTACAGAATATGGG+AGG | 0.698919 | 3.3:+80174339 | MS.gene049250:intron |
| TCTACGCATGTCTAACAAAG+GGG | 0.704307 | 3.3:+80174007 | MS.gene049250:CDS |
| GACAGAAGGTGCTATACATG+TGG | 0.711532 | 3.3:+80174526 | MS.gene049250:CDS |
| AGTACTCCAGCATCCAACCG+TGG | 0.718670 | 3.3:+80174409 | MS.gene049250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAGATAATAAAAAAAAAATA+TGG | - | chr3.3:80171100-80171119 | None:intergenic | 10.0% |
| !!! | TGCATATATATTTTAAAAAA+AGG | - | chr3.3:80170999-80171018 | None:intergenic | 10.0% |
| !! | GAGATATTATGATTTATTTA+TGG | + | chr3.3:80172255-80172274 | MS.gene049250:intron | 15.0% |
| !! | TATTGTTTCATATGAAATAA+TGG | + | chr3.3:80171405-80171424 | MS.gene049250:intron | 15.0% |
| !!! | AATCCAAATATATTTTTAGA+AGG | - | chr3.3:80171380-80171399 | None:intergenic | 15.0% |
| !!! | ATAAATACATGTGTTATTAT+AGG | + | chr3.3:80171250-80171269 | MS.gene049250:intron | 15.0% |
| !!! | ATCCAAATATATTTTTAGAA+GGG | - | chr3.3:80171379-80171398 | None:intergenic | 15.0% |
| !!! | TACTTTTAATTTAATCAATG+TGG | + | chr3.3:80171993-80172012 | MS.gene049250:intron | 15.0% |
| !! | ACAAATACTATAGACAAAAT+TGG | - | chr3.3:80173265-80173284 | None:intergenic | 20.0% |
| !! | ATACAGATAATAACAAAAAC+AGG | + | chr3.3:80173980-80173999 | MS.gene049250:CDS | 20.0% |
| !! | ATCCATGAAAAAAAATGAAA+TGG | - | chr3.3:80172426-80172445 | None:intergenic | 20.0% |
| !! | CAAATACTATAGACAAAATT+GGG | - | chr3.3:80173264-80173283 | None:intergenic | 20.0% |
| !! | CTAATTGTAGAAAATATTAC+AGG | + | chr3.3:80170840-80170859 | MS.gene049250:intron | 20.0% |
| !! | CTGAATTATTCTCTTAAAAA+AGG | + | chr3.3:80173762-80173781 | MS.gene049250:intron | 20.0% |
| !! | TTAAAGAATCAATATTGCAA+AGG | - | chr3.3:80171163-80171182 | None:intergenic | 20.0% |
| !! | TTATTCTCTTAAAAAAGGAA+AGG | + | chr3.3:80173767-80173786 | MS.gene049250:intron | 20.0% |
| !!! | AACCCTTCTAAAAATATATT+TGG | + | chr3.3:80171374-80171393 | MS.gene049250:intron | 20.0% |
| !!! | ATAATATCTAAAACAAGACA+TGG | - | chr3.3:80170812-80170831 | None:intergenic | 20.0% |
| !!! | ATATTTTTTAAATCCCAATC+TGG | + | chr3.3:80171028-80171047 | MS.gene049250:intron | 20.0% |
| !!! | ATTCCCTTAAATTTCAATTT+TGG | - | chr3.3:80173870-80173889 | None:intergenic | 20.0% |
| !!! | CAATAATTTTGGTATAGATT+AGG | - | chr3.3:80174058-80174077 | None:intergenic | 20.0% |
| !!! | GAAATAAGAATCGTAAATTT+TGG | + | chr3.3:80172743-80172762 | MS.gene049250:intron | 20.0% |
| !!! | TGATACACAAATGTTAATTT+TGG | + | chr3.3:80172825-80172844 | MS.gene049250:intron | 20.0% |
| !!! | TTTTTTTTATTATCTGCCTA+AGG | + | chr3.3:80171104-80171123 | MS.gene049250:intron | 20.0% |
| ! | AAAATCAATAAGAGTGAGTT+AGG | - | chr3.3:80173086-80173105 | None:intergenic | 25.0% |
| ! | AATCAGTGTATTATATTGCA+TGG | + | chr3.3:80174220-80174239 | MS.gene049250:intron | 25.0% |
| ! | AATGGATCTAATTCTTCTAA+CGG | + | chr3.3:80174469-80174488 | MS.gene049250:CDS | 25.0% |
| ! | AATTGACATGTGATAATTGA+TGG | + | chr3.3:80172860-80172879 | MS.gene049250:intron | 25.0% |
| ! | AGTAACAATGAGATTCAATT+GGG | + | chr3.3:80171873-80171892 | MS.gene049250:intron | 25.0% |
| ! | ATAAGTGCTTCAACTAAAAA+AGG | - | chr3.3:80171225-80171244 | None:intergenic | 25.0% |
| ! | ATGTCATTGCTAAAATTTGT+AGG | - | chr3.3:80172221-80172240 | None:intergenic | 25.0% |
| ! | CTAATACACAGAAAATCTAA+AGG | + | chr3.3:80173536-80173555 | MS.gene049250:intron | 25.0% |
| ! | CTGCCAAAATTGAAATTTAA+GGG | + | chr3.3:80173864-80173883 | MS.gene049250:intron | 25.0% |
| ! | TTGAATTGAATTAGGTAAAC+AGG | - | chr3.3:80170867-80170886 | None:intergenic | 25.0% |
| !! | AACAATGATGGAAAAATGTA+TGG | - | chr3.3:80173838-80173857 | None:intergenic | 25.0% |
| !! | AATCGTAAATTTTGGACATT+AGG | + | chr3.3:80172751-80172770 | MS.gene049250:intron | 25.0% |
| !! | ATACAGAAAAACTTGCTTAA+GGG | - | chr3.3:80172293-80172312 | None:intergenic | 25.0% |
| !! | GTAGTCTCTTGATAATTAAT+AGG | + | chr3.3:80172122-80172141 | MS.gene049250:intron | 25.0% |
| !! | TGAGTTTTTATAGCATTTTG+CGG | + | chr3.3:80172354-80172373 | MS.gene049250:intron | 25.0% |
| !! | TGTGATAGTCACAATAATTT+TGG | - | chr3.3:80174069-80174088 | None:intergenic | 25.0% |
| !! | TTAAGCAAGTTTTTCTGTAT+GGG | + | chr3.3:80172293-80172312 | MS.gene049250:intron | 25.0% |
| !! | TTTACGATTCTTATTTCTCT+AGG | - | chr3.3:80172740-80172759 | None:intergenic | 25.0% |
| !!! | GATATATGTTTTAGTGATGT+TGG | + | chr3.3:80170784-80170803 | MS.gene049250:intron | 25.0% |
| !!! | TCGCATGTATATTTTTTTTC+TGG | + | chr3.3:80173723-80173742 | MS.gene049250:intron | 25.0% |
| !!! | TGCCATTTCATTTTTTTTCA+TGG | + | chr3.3:80172421-80172440 | MS.gene049250:intron | 25.0% |
| AAAAGGCAAGGTATAATCAT+TGG | - | chr3.3:80172461-80172480 | None:intergenic | 30.0% | |
| AAAAGGTAGTAATCTCTAAG+GGG | + | chr3.3:80173503-80173522 | MS.gene049250:intron | 30.0% | |
| AAAATGAAATGGCAGTAAAC+AGG | - | chr3.3:80172415-80172434 | None:intergenic | 30.0% | |
| AAAGTACACCACAAAATCTA+AGG | - | chr3.3:80171979-80171998 | None:intergenic | 30.0% | |
| AAGGGTTACTACTAAGTAAT+TGG | - | chr3.3:80171361-80171380 | None:intergenic | 30.0% | |
| AAGTTAGTTAGAGGGAAAAA+TGG | - | chr3.3:80171744-80171763 | None:intergenic | 30.0% | |
| AATTTCTGTAGTAGAGAAGA+TGG | - | chr3.3:80173232-80173251 | None:intergenic | 30.0% | |
| ACAATGAAGAGTAACTTAAG+AGG | + | chr3.3:80170711-80170730 | MS.gene049250:intron | 30.0% | |
| ACTATAGACAAAATTGGGTT+AGG | - | chr3.3:80173259-80173278 | None:intergenic | 30.0% | |
| AGTTAGTTAGAGGGAAAAAT+GGG | - | chr3.3:80171743-80171762 | None:intergenic | 30.0% | |
| ATGGATCTAATTCTTCTAAC+GGG | + | chr3.3:80174470-80174489 | MS.gene049250:CDS | 30.0% | |
| ATTACCTCTGTTACAGAATA+TGG | + | chr3.3:80174335-80174354 | MS.gene049250:intron | 30.0% | |
| ATTTGATGTACTCTCTTTAC+TGG | + | chr3.3:80173153-80173172 | MS.gene049250:intron | 30.0% | |
| ATTTGTGTATCACAAACTAC+AGG | - | chr3.3:80172817-80172836 | None:intergenic | 30.0% | |
| CAACAAAATGGTAAGATTTC+TGG | + | chr3.3:80172684-80172703 | MS.gene049250:intron | 30.0% | |
| CAGTAACAATGAGATTCAAT+TGG | + | chr3.3:80171872-80171891 | MS.gene049250:intron | 30.0% | |
| CAGTAATGACAGATTATAGT+TGG | + | chr3.3:80171944-80171963 | MS.gene049250:intron | 30.0% | |
| GAAAAGGTAGTAATCTCTAA+GGG | + | chr3.3:80173502-80173521 | MS.gene049250:intron | 30.0% | |
| GAGGAACAAAATATATTGCA+TGG | + | chr3.3:80174280-80174299 | MS.gene049250:intron | 30.0% | |
| GCTGAAACTTGAATTGAATT+AGG | - | chr3.3:80170875-80170894 | None:intergenic | 30.0% | |
| GCTGCCAAAATTGAAATTTA+AGG | + | chr3.3:80173863-80173882 | MS.gene049250:intron | 30.0% | |
| TTACCTCTGTTACAGAATAT+GGG | + | chr3.3:80174336-80174355 | MS.gene049250:intron | 30.0% | |
| TTTGTGTATCACAAACTACA+GGG | - | chr3.3:80172816-80172835 | None:intergenic | 30.0% | |
| TTTGTTCAGTTAGAACCTTA+GGG | - | chr3.3:80171629-80171648 | None:intergenic | 30.0% | |
| ! | AAACCTTTTTACACAATGCA+GGG | + | chr3.3:80173902-80173921 | MS.gene049250:intron | 30.0% |
| ! | AACAAATTTTGTCACCAGAT+TGG | - | chr3.3:80171045-80171064 | None:intergenic | 30.0% |
| ! | ACAAATTTTGTCACCAGATT+GGG | - | chr3.3:80171044-80171063 | None:intergenic | 30.0% |
| ! | AGTAAAGAGAGTACATCAAA+TGG | - | chr3.3:80173154-80173173 | None:intergenic | 30.0% |
| ! | CAGAAATCTTACCATTTTGT+TGG | - | chr3.3:80172686-80172705 | None:intergenic | 30.0% |
| ! | CATACAGAAAAACTTGCTTA+AGG | - | chr3.3:80172294-80172313 | None:intergenic | 30.0% |
| ! | CTTAAGCAAGTTTTTCTGTA+TGG | + | chr3.3:80172292-80172311 | MS.gene049250:intron | 30.0% |
| ! | GATTTTCCAATAGTTTTCCT+TGG | + | chr3.3:80173100-80173119 | MS.gene049250:intron | 30.0% |
| ! | TAAACCTTTTTACACAATGC+AGG | + | chr3.3:80173901-80173920 | MS.gene049250:intron | 30.0% |
| ! | TAATGGCTCTATGTAAACTA+TGG | + | chr3.3:80171422-80171441 | MS.gene049250:intron | 30.0% |
| ! | TACAGTCTTGACATGTATTT+TGG | + | chr3.3:80173040-80173059 | MS.gene049250:intron | 30.0% |
| ! | TGTGTTATTATAGGTTGCAT+TGG | + | chr3.3:80171259-80171278 | MS.gene049250:intron | 30.0% |
| ! | TTTGTTACAAGAGTATGTGA+AGG | - | chr3.3:80171677-80171696 | None:intergenic | 30.0% |
| ! | TTTTGTTCAGTTAGAACCTT+AGG | - | chr3.3:80171630-80171649 | None:intergenic | 30.0% |
| !! | AATAATAGCCCTTTTTCACT+AGG | - | chr3.3:80173647-80173666 | None:intergenic | 30.0% |
| AAATGGTTGACATTGTAGCT+TGG | - | chr3.3:80170912-80170931 | None:intergenic | 35.0% | |
| AACTTGTGAACAGAATGTAG+AGG | - | chr3.3:80171919-80171938 | None:intergenic | 35.0% | |
| AAGCTACAATGTCAACCATT+TGG | + | chr3.3:80170911-80170930 | MS.gene049250:CDS | 35.0% | |
| AATATCCGAATGGATAGTAG+AGG | - | chr3.3:80171776-80171795 | None:intergenic | 35.0% | |
| AATGAGATGATGTCCAACAT+TGG | + | chr3.3:80170681-80170700 | MS.gene049250:CDS | 35.0% | |
| AATGAGCGAAAACGTAAAGA+AGG | - | chr3.3:80172073-80172092 | None:intergenic | 35.0% | |
| ACACAGTTGACAGAAATATG+TGG | + | chr3.3:80171301-80171320 | MS.gene049250:CDS | 35.0% | |
| AGCTACAATGTCAACCATTT+GGG | + | chr3.3:80170912-80170931 | MS.gene049250:CDS | 35.0% | |
| ATGAGATGATGTCCAACATT+GGG | + | chr3.3:80170682-80170701 | MS.gene049250:CDS | 35.0% | |
| ATGGAGGATAGTCAAACAAT+CGG | - | chr3.3:80173135-80173154 | None:intergenic | 35.0% | |
| CAAACATTAGCAAAGTGAGA+TGG | - | chr3.3:80174556-80174575 | None:intergenic | 35.0% | |
| CAGAAACCAAGGAAAACTAT+TGG | - | chr3.3:80173109-80173128 | None:intergenic | 35.0% | |
| GAAAGATGTGTTTGAACCTA+TGG | + | chr3.3:80173477-80173496 | MS.gene049250:intron | 35.0% | |
| GGAAAAGGTAGTAATCTCTA+AGG | + | chr3.3:80173501-80173520 | MS.gene049250:intron | 35.0% | |
| GTTATTATAGGTTGCATTGG+TGG | + | chr3.3:80171262-80171281 | MS.gene049250:intron | 35.0% | |
| TCATCAGCACATCAATAACA+TGG | - | chr3.3:80172919-80172938 | None:intergenic | 35.0% | |
| TCATTGTTACTGACACTGAT+AGG | - | chr3.3:80171864-80171883 | None:intergenic | 35.0% | |
| TGAATCTGTCGTATATACAC+AGG | - | chr3.3:80172189-80172208 | None:intergenic | 35.0% | |
| TGATATGTCATGCAGATTAG+AGG | + | chr3.3:80174261-80174280 | MS.gene049250:intron | 35.0% | |
| TTCAAACCAACAATGATGTG+TGG | - | chr3.3:80173397-80173416 | None:intergenic | 35.0% | |
| TTCTACGCATGTCTAACAAA+GGG | + | chr3.3:80174006-80174025 | MS.gene049250:CDS | 35.0% | |
| TTGACAGAAATATGTGGTAC+CGG | + | chr3.3:80171307-80171326 | MS.gene049250:CDS | 35.0% | |
| TTGGTTCATTCCAGGATATT+GGG | - | chr3.3:80172667-80172686 | None:intergenic | 35.0% | |
| TTTGCAATTCGCAAAACACA+CGG | - | chr3.3:80173961-80173980 | None:intergenic | 35.0% | |
| TTTGTTCCACACATCATTGT+TGG | + | chr3.3:80173388-80173407 | MS.gene049250:intron | 35.0% | |
| ! | AAAGAGAGTACATCAAATGG+AGG | - | chr3.3:80173151-80173170 | None:intergenic | 35.0% |
| ! | AAAGGTAGTAATCTCTAAGG+GGG | + | chr3.3:80173504-80173523 | MS.gene049250:intron | 35.0% |
| ! | AACCTTTTTACACAATGCAG+GGG | + | chr3.3:80173903-80173922 | MS.gene049250:intron | 35.0% |
| ! | AATCTCATCTTAGGTGGTTT+TGG | - | chr3.3:80173206-80173225 | None:intergenic | 35.0% |
| ! | ATTACTACCTTTTCCACCAT+AGG | - | chr3.3:80173496-80173515 | None:intergenic | 35.0% |
| ! | GCATGGTTTTCATTATGTGA+TGG | + | chr3.3:80174237-80174256 | MS.gene049250:intron | 35.0% |
| ! | GTTTGATAGAGTGGATTTGT+GGG | + | chr3.3:80170626-80170645 | MS.gene049250:CDS | 35.0% |
| ! | TGTGGATTGAAAGCAATCAA+GGG | - | chr3.3:80174148-80174167 | None:intergenic | 35.0% |
| ! | TGTTTGATAGAGTGGATTTG+TGG | + | chr3.3:80170625-80170644 | MS.gene049250:CDS | 35.0% |
| ! | TTCCAGATCCTTAGATTTTG+TGG | + | chr3.3:80171968-80171987 | MS.gene049250:intron | 35.0% |
| ! | TTGTGGATTGAAAGCAATCA+AGG | - | chr3.3:80174149-80174168 | None:intergenic | 35.0% |
| !! | AACAGTAAACTTGGTGTTGT+AGG | - | chr3.3:80173342-80173361 | None:intergenic | 35.0% |
| !! | ACAGTAAACTTGGTGTTGTA+GGG | - | chr3.3:80173341-80173360 | None:intergenic | 35.0% |
| !! | ATGTCAGCTTGTGTTATTTG+TGG | - | chr3.3:80174166-80174185 | None:intergenic | 35.0% |
| ACAATGTCAACCATTTGGGT+AGG | + | chr3.3:80170916-80170935 | MS.gene049250:intron | 40.0% | |
| AGATGGCAGAATCTCATCTT+AGG | - | chr3.3:80173215-80173234 | None:intergenic | 40.0% | |
| AGATGTGTTTGAACCTATGG+TGG | + | chr3.3:80173480-80173499 | MS.gene049250:intron | 40.0% | |
| AGCACATCAATAACATGGTG+AGG | - | chr3.3:80172914-80172933 | None:intergenic | 40.0% | |
| ATCAATAACATGGTGAGGCT+TGG | - | chr3.3:80172909-80172928 | None:intergenic | 40.0% | |
| ATCCCCTGCATTGTGTAAAA+AGG | - | chr3.3:80173908-80173927 | None:intergenic | 40.0% | |
| CAAAACACTGGACAGTCTAA+TGG | - | chr3.3:80173372-80173391 | None:intergenic | 40.0% | |
| CACCACAAAATCTAAGGATC+TGG | - | chr3.3:80171973-80171992 | None:intergenic | 40.0% | |
| CATGGTGTAGTTGAAACACA+TGG | + | chr3.3:80170749-80170768 | MS.gene049250:intron | 40.0% | |
| CATTCGGATATTCTCATGAC+GGG | + | chr3.3:80171784-80171803 | MS.gene049250:intron | 40.0% | |
| CCATTCGGATATTCTCATGA+CGG | + | chr3.3:80171783-80171802 | MS.gene049250:intron | 40.0% | |
| CCTGGAATGAACCAACAAAA+TGG | + | chr3.3:80172672-80172691 | MS.gene049250:CDS | 40.0% | |
| CTACGAGAAACTCAGAGAAA+TGG | - | chr3.3:80172106-80172125 | None:intergenic | 40.0% | |
| GGAAAAATGGGAAACACATG+TGG | - | chr3.3:80171731-80171750 | None:intergenic | 40.0% | |
| GTACAGTTGTCAGCAATACA+GGG | + | chr3.3:80171829-80171848 | MS.gene049250:intron | 40.0% | |
| GTCACAAGTCAGTGACAAAA+AGG | + | chr3.3:80172376-80172395 | MS.gene049250:intron | 40.0% | |
| GTTCTACGCATGTCTAACAA+AGG | + | chr3.3:80174005-80174024 | MS.gene049250:CDS | 40.0% | |
| TACACCATGATCTCACTACT+TGG | - | chr3.3:80170738-80170757 | None:intergenic | 40.0% | |
| TAGCACCTTCTGTCAGAAAT+AGG | - | chr3.3:80174520-80174539 | None:intergenic | 40.0% | |
| TCAGTTAGAACCTTAGGGTT+GGG | - | chr3.3:80171624-80171643 | None:intergenic | 40.0% | |
| TCTACGCATGTCTAACAAAG+GGG | + | chr3.3:80174007-80174026 | MS.gene049250:CDS | 40.0% | |
| TGATGTGTGGAACAAAACAC+TGG | - | chr3.3:80173384-80173403 | None:intergenic | 40.0% | |
| TGGTTCATTCCAGGATATTG+GGG | - | chr3.3:80172666-80172685 | None:intergenic | 40.0% | |
| TTCAGTTAGAACCTTAGGGT+TGG | - | chr3.3:80171625-80171644 | None:intergenic | 40.0% | |
| TTTCTTTCCAGTTGCTCCTT+AGG | - | chr3.3:80171123-80171142 | None:intergenic | 40.0% | |
| ! | ACAAGAGTATGTGAAGGTAG+AGG | - | chr3.3:80171671-80171690 | None:intergenic | 40.0% |
| ! | CAAGAGTATGTGAAGGTAGA+GGG | - | chr3.3:80171670-80171689 | None:intergenic | 40.0% |
| ! | GTGGATTGAAAGCAATCAAG+GGG | - | chr3.3:80174147-80174166 | None:intergenic | 40.0% |
| ! | GTTGGTTCATTCCAGGATAT+TGG | - | chr3.3:80172668-80172687 | None:intergenic | 40.0% |
| ! | GTTTGAACCTATGGTGGAAA+AGG | + | chr3.3:80173486-80173505 | MS.gene049250:intron | 40.0% |
| !! | GTGATCCTATTTCTGACAGA+AGG | + | chr3.3:80174512-80174531 | MS.gene049250:CDS | 40.0% |
| !!! | CCATTTTGTTGGTTCATTCC+AGG | - | chr3.3:80172675-80172694 | None:intergenic | 40.0% |
| !!! | TTAGGTGGTTTTGGCATGTA+CGG | - | chr3.3:80173197-80173216 | None:intergenic | 40.0% |
| AACACTGGACAGTCTAATGG+CGG | - | chr3.3:80173369-80173388 | None:intergenic | 45.0% | |
| AACATGGTGAGGCTTGGATA+GGG | - | chr3.3:80172903-80172922 | None:intergenic | 45.0% | |
| AAGACATGCACCTACCCAAA+TGG | - | chr3.3:80170929-80170948 | None:intergenic | 45.0% | |
| AATGGATAGTAGAGGTGAGG+TGG | - | chr3.3:80171768-80171787 | None:intergenic | 45.0% | |
| ACAATCGGAGACAGAAACCA+AGG | - | chr3.3:80173120-80173139 | None:intergenic | 45.0% | |
| ACCTCGACTAGTGTAGCAAT+GGG | - | chr3.3:80173691-80173710 | None:intergenic | 45.0% | |
| ACTAGGTGAGGTCGATTAAG+TGG | - | chr3.3:80173630-80173649 | None:intergenic | 45.0% | |
| AGAAGATAACCCCTGTAACC+CGG | + | chr3.3:80171560-80171579 | MS.gene049250:intron | 45.0% | |
| AGAGAAATGTCCCTTCTCTG+AGG | - | chr3.3:80171596-80171615 | None:intergenic | 45.0% | |
| AGAGTCAACCATGCAGATCT+TGG | + | chr3.3:80172790-80172809 | MS.gene049250:intron | 45.0% | |
| AGCAAAAGCTCCTCAGAGAA+GGG | + | chr3.3:80171583-80171602 | MS.gene049250:intron | 45.0% | |
| AGGTCCAAGTAGTGAGATCA+TGG | + | chr3.3:80170731-80170750 | MS.gene049250:intron | 45.0% | |
| ATTCATACAGACCTGGCATG+CGG | - | chr3.3:80171336-80171355 | None:intergenic | 45.0% | |
| ATTGGCCATTCATACAGACC+TGG | - | chr3.3:80171343-80171362 | None:intergenic | 45.0% | |
| CACATGTGGCAATGAGTGAT+TGG | - | chr3.3:80171717-80171736 | None:intergenic | 45.0% | |
| CATTGTGCTAGTCCCAATGT+TGG | - | chr3.3:80170697-80170716 | None:intergenic | 45.0% | |
| CCGTCATGAGAATATCCGAA+TGG | - | chr3.3:80171786-80171805 | None:intergenic | 45.0% | |
| CCTCACCTCTACTATCCATT+CGG | + | chr3.3:80171768-80171787 | MS.gene049250:intron | 45.0% | |
| CCTCCCATATTCTGTAACAG+AGG | - | chr3.3:80174342-80174361 | None:intergenic | 45.0% | |
| CCTCTGTTACAGAATATGGG+AGG | + | chr3.3:80174339-80174358 | MS.gene049250:intron | 45.0% | |
| CGACCTCACCTAGTGAAAAA+GGG | + | chr3.3:80173636-80173655 | MS.gene049250:intron | 45.0% | |
| CGTACAGTTGTCAGCAATAC+AGG | + | chr3.3:80171828-80171847 | MS.gene049250:intron | 45.0% | |
| GAAAGCAATCAAGGGGAAAG+AGG | - | chr3.3:80174140-80174159 | None:intergenic | 45.0% | |
| GAGGTGGCAAGTTAGTTAGA+GGG | - | chr3.3:80171752-80171771 | None:intergenic | 45.0% | |
| GATGAACTCAACAATGGCAG+TGG | + | chr3.3:80174361-80174380 | MS.gene049250:CDS | 45.0% | |
| GGCGGCAAAAACAGTAAACT+TGG | - | chr3.3:80173351-80173370 | None:intergenic | 45.0% | |
| GTAGGGATGAGAATGCTAGT+TGG | - | chr3.3:80173324-80173343 | None:intergenic | 45.0% | |
| GTCAGAAATAGGATCACCAG+TGG | - | chr3.3:80174509-80174528 | None:intergenic | 45.0% | |
| GTTCGCACTGTCAAGAAACA+GGG | + | chr3.3:80172595-80172614 | MS.gene049250:CDS | 45.0% | |
| TAACATGGTGAGGCTTGGAT+AGG | - | chr3.3:80172904-80172923 | None:intergenic | 45.0% | |
| TCGACCTCACCTAGTGAAAA+AGG | + | chr3.3:80173635-80173654 | MS.gene049250:intron | 45.0% | |
| TGAGGTGGCAAGTTAGTTAG+AGG | - | chr3.3:80171753-80171772 | None:intergenic | 45.0% | |
| TGGCAATGAGTGATTGGTGA+GGG | - | chr3.3:80171711-80171730 | None:intergenic | 45.0% | |
| TGGCAGAATCTCATCTTAGG+TGG | - | chr3.3:80173212-80173231 | None:intergenic | 45.0% | |
| TGGCAGCTGCTAAACAATGA+TGG | - | chr3.3:80173850-80173869 | None:intergenic | 45.0% | |
| TGGGAGGATGAACTCAACAA+TGG | + | chr3.3:80174355-80174374 | MS.gene049250:CDS | 45.0% | |
| TGGTTGACATTGTAGCTTGG+TGG | - | chr3.3:80170909-80170928 | None:intergenic | 45.0% | |
| TGTTCGCACTGTCAAGAAAC+AGG | + | chr3.3:80172594-80172613 | MS.gene049250:CDS | 45.0% | |
| TTATCTGCCTAAGGAGCAAC+TGG | + | chr3.3:80171113-80171132 | MS.gene049250:intron | 45.0% | |
| ! | TGATAGAGTGGATTTGTGGG+AGG | + | chr3.3:80170629-80170648 | MS.gene049250:CDS | 45.0% |
| ! | TGGTTGATGCAGTAGACCTT+GGG | - | chr3.3:80172539-80172558 | None:intergenic | 45.0% |
| !! | AGACCTTGGGTTGGTATGAT+GGG | - | chr3.3:80172526-80172545 | None:intergenic | 45.0% |
| !! | GAAAGAGGTTGGTAGGCTAT+TGG | - | chr3.3:80174125-80174144 | None:intergenic | 45.0% |
| !! | GACAGAAGGTGCTATACATG+TGG | + | chr3.3:80174526-80174545 | MS.gene049250:CDS | 45.0% |
| !! | TAGACCTTGGGTTGGTATGA+TGG | - | chr3.3:80172527-80172546 | None:intergenic | 45.0% |
| !! | TAGCCCTTTTTCACTAGGTG+AGG | - | chr3.3:80173642-80173661 | None:intergenic | 45.0% |
| !! | TTGCCTTGGGTTGGTATGAT+GGG | - | chr3.3:80172568-80172587 | None:intergenic | 45.0% |
| !!! | CAACTACGCTTTTTCCCACT+AGG | + | chr3.3:80172987-80173006 | MS.gene049250:intron | 45.0% |
| !!! | TACGCTTTTTCCCACTAGGT+GGG | + | chr3.3:80172991-80173010 | MS.gene049250:intron | 45.0% |
| !! | AAAATTATTATAAAACTTTA+TGG | + | chr3.3:80173594-80173613 | MS.gene049250:intron | 5.0% |
| !! | AGATAATAAAAAAAAAATAT+GGG | - | chr3.3:80171099-80171118 | None:intergenic | 5.0% |
| !!! | ATTAATTTCAATTTAATTTT+TGG | + | chr3.3:80174184-80174203 | MS.gene049250:intron | 5.0% |
| ACAAACTGCTTGCCTTGGGT+TGG | - | chr3.3:80172577-80172596 | None:intergenic | 50.0% | |
| ATGAAGCCAACCCACCTAGT+GGG | - | chr3.3:80173004-80173023 | None:intergenic | 50.0% | |
| CACCTCGACTAGTGTAGCAA+TGG | - | chr3.3:80173692-80173711 | None:intergenic | 50.0% | |
| CCGAATGGATAGTAGAGGTG+AGG | - | chr3.3:80171771-80171790 | None:intergenic | 50.0% | |
| CTAGGCTGTCTATTCTGCTG+TGG | - | chr3.3:80172722-80172741 | None:intergenic | 50.0% | |
| CTCTTGCTGGGAAAAAGGCA+AGG | - | chr3.3:80172473-80172492 | None:intergenic | 50.0% | |
| GAACTCAACAATGGCAGTGG+AGG | + | chr3.3:80174364-80174383 | MS.gene049250:CDS | 50.0% | |
| GAGCAAAAGCTCCTCAGAGA+AGG | + | chr3.3:80171582-80171601 | MS.gene049250:intron | 50.0% | |
| GATAGGGCAGACTCATCTCT+AGG | - | chr3.3:80172887-80172906 | None:intergenic | 50.0% | |
| GCAATCAAGGGGAAAGAGGT+TGG | - | chr3.3:80174136-80174155 | None:intergenic | 50.0% | |
| GCATGCCAGGTCTGTATGAA+TGG | + | chr3.3:80171335-80171354 | MS.gene049250:intron | 50.0% | |
| GCGAACAAACTGCTTGCCTT+GGG | - | chr3.3:80172581-80172600 | None:intergenic | 50.0% | |
| GCTAATGTTTGCCCCAATCG+TGG | + | chr3.3:80174565-80174584 | MS.gene049250:CDS | 50.0% | |
| GGCAATGAGTGATTGGTGAG+GGG | - | chr3.3:80171710-80171729 | None:intergenic | 50.0% | |
| GTGGCAATGAGTGATTGGTG+AGG | - | chr3.3:80171712-80171731 | None:intergenic | 50.0% | |
| TCCAGGAATCCCCAATATCC+TGG | + | chr3.3:80172654-80172673 | MS.gene049250:CDS | 50.0% | |
| TCCAGGATATTGGGGATTCC+TGG | - | chr3.3:80172658-80172677 | None:intergenic | 50.0% | |
| TCCCATTGCTACACTAGTCG+AGG | + | chr3.3:80173687-80173706 | MS.gene049250:intron | 50.0% | |
| TCGACCTCTTGCTGGGAAAA+AGG | - | chr3.3:80172478-80172497 | None:intergenic | 50.0% | |
| TGATGCAGTAGACCTTGGGT+TGG | - | chr3.3:80172535-80172554 | None:intergenic | 50.0% | |
| TGCGAACAAACTGCTTGCCT+TGG | - | chr3.3:80172582-80172601 | None:intergenic | 50.0% | |
| TTCATACAGACCTGGCATGC+GGG | - | chr3.3:80171335-80171354 | None:intergenic | 50.0% | |
| ! | AGCTTTTGCTCCGGGTTACA+GGG | - | chr3.3:80171573-80171592 | None:intergenic | 50.0% |
| ! | CTGGTTGATGCAGTAGACCT+TGG | - | chr3.3:80172540-80172559 | None:intergenic | 50.0% |
| ! | CTTGCCTTTTTCCCAGCAAG+AGG | + | chr3.3:80172471-80172490 | MS.gene049250:intron | 50.0% |
| ! | CTTTTTCCCACTAGGTGGGT+TGG | + | chr3.3:80172995-80173014 | MS.gene049250:intron | 50.0% |
| ! | TCAAGGGGAAAGAGGTTGGT+AGG | - | chr3.3:80174132-80174151 | None:intergenic | 50.0% |
| ! | TTTTTCCCAGCAAGAGGTCG+AGG | + | chr3.3:80172477-80172496 | MS.gene049250:intron | 50.0% |
| !! | ACTAGGTGGGTTGGCTTCAT+GGG | + | chr3.3:80173004-80173023 | MS.gene049250:intron | 50.0% |
| !! | CTTGCCTTGGGTTGGTATGA+TGG | - | chr3.3:80172569-80172588 | None:intergenic | 50.0% |
| !! | TCTCTGAGGAGCTTTTGCTC+CGG | - | chr3.3:80171582-80171601 | None:intergenic | 50.0% |
| !!! | CTACGCTTTTTCCCACTAGG+TGG | + | chr3.3:80172990-80173009 | MS.gene049250:intron | 50.0% |
| ACGCCCATCATACCAACCCA+AGG | + | chr3.3:80172520-80172539 | MS.gene049250:CDS | 55.0% | |
| AGTACTCCAGCATCCAACCG+TGG | + | chr3.3:80174409-80174428 | MS.gene049250:CDS | 55.0% | |
| CATGAAGCCAACCCACCTAG+TGG | - | chr3.3:80173005-80173024 | None:intergenic | 55.0% | |
| CTACAGGGCCAAGATCTGCA+TGG | - | chr3.3:80172801-80172820 | None:intergenic | 55.0% | |
| GCATCCAACCGTGGTCGAAA+TGG | + | chr3.3:80174418-80174437 | MS.gene049250:CDS | 55.0% | |
| TAGGTCCTCGACCTCTTGCT+GGG | - | chr3.3:80172485-80172504 | None:intergenic | 55.0% | |
| TCCAACCGTGGTCGAAATGG+TGG | + | chr3.3:80174421-80174440 | MS.gene049250:CDS | 55.0% | |
| TCTCTCTCTGCCCAACCCTA+AGG | + | chr3.3:80171611-80171630 | MS.gene049250:intron | 55.0% | |
| TCTGTTGCATGCAGCTCGTG+TGG | + | chr3.3:80173931-80173950 | MS.gene049250:CDS | 55.0% | |
| TTTCGACCACGGTTGGATGC+TGG | - | chr3.3:80174418-80174437 | None:intergenic | 55.0% | |
| ! | GAGCTTTTGCTCCGGGTTAC+AGG | - | chr3.3:80171574-80171593 | None:intergenic | 55.0% |
| ! | GCGTTGCTGGTTGATGCAGT+AGG | - | chr3.3:80172504-80172523 | None:intergenic | 55.0% |
| ! | GCTTTTGCTCCGGGTTACAG+GGG | - | chr3.3:80171572-80171591 | None:intergenic | 55.0% |
| !! | CACTAGGTGGGTTGGCTTCA+TGG | + | chr3.3:80173003-80173022 | MS.gene049250:intron | 55.0% |
| !! | CTCTGAGGAGCTTTTGCTCC+GGG | - | chr3.3:80171581-80171600 | None:intergenic | 55.0% |
| !! | GTTGGTATGATGGGCGTTGC+TGG | - | chr3.3:80172517-80172536 | None:intergenic | 55.0% |
| AATGGTGGCCGTGGATCTCG+TGG | + | chr3.3:80174436-80174455 | MS.gene049250:CDS | 60.0% | |
| ACGCTGTGTGCAGCTGTGGT+AGG | - | chr3.3:80171811-80171830 | None:intergenic | 60.0% | |
| CACGGCCACCATTTCGACCA+CGG | - | chr3.3:80174429-80174448 | None:intergenic | 60.0% | |
| CTGTACGCTGTGTGCAGCTG+TGG | - | chr3.3:80171815-80171834 | None:intergenic | 60.0% | |
| CTTCACAGACTCGACGCTCC+AGG | + | chr3.3:80172637-80172656 | MS.gene049250:CDS | 60.0% | |
| GACCCCTACCACGAGATCCA+CGG | - | chr3.3:80174447-80174466 | None:intergenic | 60.0% | |
| GCCACCATTTCGACCACGGT+TGG | - | chr3.3:80174425-80174444 | None:intergenic | 60.0% | |
| GGGACATTCGTGTCAGCCAC+TGG | + | chr3.3:80174490-80174509 | MS.gene049250:CDS | 60.0% | |
| GTAGGTCCTCGACCTCTTGC+TGG | - | chr3.3:80172486-80172505 | None:intergenic | 60.0% | |
| TCTCGTGGTAGGGGTCGCAA+TGG | + | chr3.3:80174451-80174470 | MS.gene049250:CDS | 60.0% | |
| TGGCCGTGGATCTCGTGGTA+GGG | + | chr3.3:80174441-80174460 | MS.gene049250:CDS | 60.0% | |
| !! | CTGGAGCGTCGAGTCTGTGA+AGG | - | chr3.3:80172639-80172658 | None:intergenic | 60.0% |
| CGTGGTCGAAATGGTGGCCG+TGG | + | chr3.3:80174427-80174446 | MS.gene049250:CDS | 65.0% | |
| GGCCGTGGATCTCGTGGTAG+GGG | + | chr3.3:80174442-80174461 | MS.gene049250:CDS | 65.0% | |
| GTGGCCGTGGATCTCGTGGT+AGG | + | chr3.3:80174440-80174459 | MS.gene049250:CDS | 65.0% | |
| CAGACCTGGCATGCGGGAGC+CGG | - | chr3.3:80171329-80171348 | None:intergenic | 70.0% | |
| !! | GGTACCGGCTCCCGCATGCC+AGG | + | chr3.3:80171322-80171341 | MS.gene049250:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 80170624 | 80174594 | 80170624 | ID=MS.gene049250 |
| chr3.3 | mRNA | 80170624 | 80174594 | 80170624 | ID=MS.gene049250.t1;Parent=MS.gene049250 |
| chr3.3 | exon | 80170624 | 80170720 | 80170624 | ID=MS.gene049250.t1.exon1;Parent=MS.gene049250.t1 |
| chr3.3 | CDS | 80170624 | 80170720 | 80170624 | ID=cds.MS.gene049250.t1;Parent=MS.gene049250.t1 |
| chr3.3 | exon | 80170850 | 80170933 | 80170850 | ID=MS.gene049250.t1.exon2;Parent=MS.gene049250.t1 |
| chr3.3 | CDS | 80170850 | 80170933 | 80170850 | ID=cds.MS.gene049250.t1;Parent=MS.gene049250.t1 |
| chr3.3 | exon | 80171272 | 80171343 | 80171272 | ID=MS.gene049250.t1.exon3;Parent=MS.gene049250.t1 |
| chr3.3 | CDS | 80171272 | 80171343 | 80171272 | ID=cds.MS.gene049250.t1;Parent=MS.gene049250.t1 |
| chr3.3 | exon | 80172487 | 80172693 | 80172487 | ID=MS.gene049250.t1.exon4;Parent=MS.gene049250.t1 |
| chr3.3 | CDS | 80172487 | 80172693 | 80172487 | ID=cds.MS.gene049250.t1;Parent=MS.gene049250.t1 |
| chr3.3 | exon | 80173923 | 80174043 | 80173923 | ID=MS.gene049250.t1.exon5;Parent=MS.gene049250.t1 |
| chr3.3 | CDS | 80173923 | 80174043 | 80173923 | ID=cds.MS.gene049250.t1;Parent=MS.gene049250.t1 |
| chr3.3 | exon | 80174351 | 80174594 | 80174351 | ID=MS.gene049250.t1.exon6;Parent=MS.gene049250.t1 |
| chr3.3 | CDS | 80174351 | 80174594 | 80174351 | ID=cds.MS.gene049250.t1;Parent=MS.gene049250.t1 |
| Gene Sequence |
| Protein sequence |
