Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06375.t1 | XP_024633621.1 | 96.9 | 929 | 29 | 0 | 1 | 929 | 1 | 929 | 0.00E+00 | 1797.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06375.t1 | Q9LVP1 | 69.9 | 931 | 263 | 5 | 2 | 930 | 5 | 920 | 0.0e+00 | 1298.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06375.t1 | A0A396IZ64 | 96.9 | 929 | 29 | 0 | 1 | 929 | 1 | 929 | 0.0e+00 | 1797.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049250 | MS.gene06375 | 0.90336 | 3.76E-79 | -1.69E-46 |
MS.gene049251 | MS.gene06375 | 0.951973 | 6.57E-110 | -1.69E-46 |
MS.gene049596 | MS.gene06375 | 0.839508 | 1.52E-57 | -1.69E-46 |
MS.gene049844 | MS.gene06375 | 0.804922 | 1.71E-49 | -1.69E-46 |
MS.gene050297 | MS.gene06375 | 0.803059 | 4.18E-49 | -1.69E-46 |
MS.gene05124 | MS.gene06375 | 0.857509 | 1.56E-62 | -1.69E-46 |
MS.gene051914 | MS.gene06375 | 0.825065 | 5.74E-54 | -1.69E-46 |
MS.gene052143 | MS.gene06375 | 0.801987 | 6.95E-49 | -1.69E-46 |
MS.gene052367 | MS.gene06375 | 0.818819 | 1.61E-52 | -1.69E-46 |
MS.gene053173 | MS.gene06375 | 0.84527 | 4.51E-59 | -1.69E-46 |
MS.gene053416 | MS.gene06375 | 0.82675 | 2.29E-54 | -1.69E-46 |
MS.gene053417 | MS.gene06375 | 0.821556 | 3.79E-53 | -1.69E-46 |
MS.gene054551 | MS.gene06375 | 0.829534 | 4.88E-55 | -1.69E-46 |
MS.gene054593 | MS.gene06375 | 0.836833 | 7.42E-57 | -1.69E-46 |
MS.gene054633 | MS.gene06375 | 0.829473 | 5.05E-55 | -1.69E-46 |
MS.gene05470 | MS.gene06375 | -0.80464 | 1.96E-49 | -1.69E-46 |
MS.gene055251 | MS.gene06375 | 0.809663 | 1.69E-50 | -1.69E-46 |
MS.gene056266 | MS.gene06375 | -0.834338 | 3.17E-56 | -1.69E-46 |
MS.gene05640 | MS.gene06375 | 0.829531 | 4.89E-55 | -1.69E-46 |
MS.gene056526 | MS.gene06375 | 0.81669 | 4.86E-52 | -1.69E-46 |
MS.gene058818 | MS.gene06375 | 0.813766 | 2.17E-51 | -1.69E-46 |
MS.gene059304 | MS.gene06375 | 0.812667 | 3.78E-51 | -1.69E-46 |
MS.gene06093 | MS.gene06375 | 0.842691 | 2.22E-58 | -1.69E-46 |
MS.gene061044 | MS.gene06375 | 0.824509 | 7.77E-54 | -1.69E-46 |
MS.gene061260 | MS.gene06375 | 0.822301 | 2.55E-53 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06375.t1 | MTR_3g096640 | 94.864 | 954 | 24 | 1 | 1 | 929 | 1 | 954 | 0.0 | 1893 |
MS.gene06375.t1 | MTR_3g084800 | 36.421 | 637 | 377 | 12 | 8 | 642 | 6 | 616 | 4.82e-123 | 394 |
MS.gene06375.t1 | MTR_3g084800 | 36.159 | 578 | 345 | 10 | 67 | 642 | 1 | 556 | 3.67e-109 | 355 |
MS.gene06375.t1 | MTR_5g061930 | 40.749 | 427 | 230 | 11 | 175 | 589 | 19 | 434 | 7.49e-89 | 290 |
MS.gene06375.t1 | MTR_5g061940 | 35.897 | 312 | 171 | 10 | 52 | 348 | 4 | 301 | 2.55e-50 | 180 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06375.t1 | AT5G63920 | 68.240 | 932 | 277 | 7 | 2 | 930 | 5 | 920 | 0.0 | 1309 |
MS.gene06375.t1 | AT2G32000 | 38.312 | 616 | 360 | 9 | 6 | 619 | 5 | 602 | 1.12e-125 | 401 |
MS.gene06375.t1 | AT2G32000 | 38.104 | 559 | 330 | 7 | 63 | 619 | 31 | 575 | 1.79e-111 | 363 |
MS.gene06375.t1 | AT4G31210 | 22.977 | 618 | 369 | 21 | 116 | 671 | 548 | 1120 | 1.87e-17 | 88.6 |
MS.gene06375.t1 | AT4G31210 | 22.977 | 618 | 369 | 21 | 116 | 671 | 544 | 1116 | 3.75e-17 | 87.4 |
MS.gene06375.t1 | AT4G31210 | 22.977 | 618 | 369 | 21 | 116 | 671 | 548 | 1120 | 4.16e-17 | 87.4 |
Find 261 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCTGAAACTTGAATTGAATT+AGG | 0.230264 | 3.1:+77059755 | None:intergenic |
TGATTCTCCAGCAGAAAATT+TGG | 0.240475 | 3.1:+77067176 | None:intergenic |
TTGGTTCATTCCAGGATATT+GGG | 0.243430 | 3.1:+77057962 | None:intergenic |
TTAGCACCATATCTGATTCT+TGG | 0.264502 | 3.1:+77061696 | None:intergenic |
GTTGGTTCATTCCAGGATAT+TGG | 0.280397 | 3.1:+77057961 | None:intergenic |
CTCATGAACCAGAAGAGTTT+TGG | 0.285949 | 3.1:-77069142 | MS.gene06375:CDS |
TTGATTAACCAAAACTCTTC+TGG | 0.293377 | 3.1:+77069134 | None:intergenic |
TAAAAGCAAAGCTGAAGTTT+TGG | 0.299296 | 3.1:-77062738 | MS.gene06375:CDS |
CATTAACATGGTCTGAAATC+TGG | 0.304374 | 3.1:+77069372 | None:intergenic |
GTTGGTTGTTCGCCACTTCC+TGG | 0.316935 | 3.1:-77067023 | MS.gene06375:CDS |
TCCAGGATATTGGGGATTCC+TGG | 0.330018 | 3.1:+77057971 | None:intergenic |
TAGCACCTTCTGTCAGAAAT+AGG | 0.331034 | 3.1:+77056109 | None:intergenic |
GATCACACGAGTGCCATTTC+CGG | 0.341045 | 3.1:+77070224 | None:intergenic |
TGTTCGCACTGTCAAGAAAC+AGG | 0.342940 | 3.1:-77058032 | MS.gene06375:CDS |
CTTGCCTTGGGTTGGTATGA+TGG | 0.344679 | 3.1:+77058060 | None:intergenic |
GTTGGTATGATGGGCGTTGC+TGG | 0.346475 | 3.1:+77058070 | None:intergenic |
GTTGGTATGATGGGCGTTGC+TGG | 0.346475 | 3.1:+77058112 | None:intergenic |
TGGACCCTGGGGCGGGACTT+TGG | 0.348552 | 3.1:-77067254 | MS.gene06375:CDS |
TCGACGATCGTTACCGGAAA+TGG | 0.351681 | 3.1:-77070237 | MS.gene06375:CDS |
ATGTCTATATCTATGATAGA+TGG | 0.354533 | 3.1:-77066191 | MS.gene06375:CDS |
CCTGGAATGAACCAACAAAA+TGG | 0.357678 | 3.1:-77057954 | MS.gene06375:intron |
GATTTGTTGTGGAAAGATAC+TGG | 0.357933 | 3.1:-77069175 | MS.gene06375:CDS |
TGATCCAGCCGATCTCTTCC+AGG | 0.358615 | 3.1:-77070206 | MS.gene06375:CDS |
TGTTAAACCCTAGGATAAAA+AGG | 0.363300 | 3.1:-77070066 | MS.gene06375:intron |
GAAATACTGTCTTGAGTTAT+GGG | 0.363324 | 3.1:-77069312 | MS.gene06375:CDS |
TTGACTTCGACGATCGTTAC+CGG | 0.368843 | 3.1:-77070243 | MS.gene06375:CDS |
TTGAATTGAATTAGGTAAAC+AGG | 0.374364 | 3.1:+77059763 | None:intergenic |
AATATATGCACAACGGTTGC+TGG | 0.376663 | 3.1:-77067274 | MS.gene06375:CDS |
GGTGGATGGGTGGATGAGCC+TGG | 0.378403 | 3.1:+77067202 | None:intergenic |
GTAGGGTGAGGCACTTGTTA+TGG | 0.378652 | 3.1:-77064235 | MS.gene06375:intron |
TACTATTGAGCTTGAGAAAC+GGG | 0.379792 | 3.1:-77068781 | MS.gene06375:CDS |
CGAATTTATGAACCGGAGCC+TGG | 0.380865 | 3.1:+77070188 | None:intergenic |
AGAAATACTGTCTTGAGTTA+TGG | 0.383690 | 3.1:-77069313 | MS.gene06375:CDS |
CACAACGGTTGCTGGACCCT+GGG | 0.387322 | 3.1:-77067266 | MS.gene06375:CDS |
TAGGGTGAGGCACTTGTTAT+GGG | 0.387423 | 3.1:-77064234 | MS.gene06375:CDS |
CGCCACGTTTAGGACGGTTA+TGG | 0.388143 | 3.1:+77070435 | None:intergenic |
GCATCAGCAAACCACTTATT+AGG | 0.391602 | 3.1:+77069612 | None:intergenic |
AAGCTACAATGTCAACCATT+TGG | 0.394455 | 3.1:-77059716 | MS.gene06375:CDS |
GAATTATGCTATCGGTGAAC+AGG | 0.404993 | 3.1:-77066151 | MS.gene06375:intron |
TGCGAACAAACTGCTTGCCT+TGG | 0.406548 | 3.1:+77058047 | None:intergenic |
AGAAAATTTGGTGGGGTGGA+TGG | 0.407631 | 3.1:+77067188 | None:intergenic |
GGATACTTTGGCTTCTCCCT+TGG | 0.408493 | 3.1:+77068819 | None:intergenic |
ACGGCTTCTCCGCCACGTTT+AGG | 0.410568 | 3.1:+77070425 | None:intergenic |
AGCTACAATGTCAACCATTT+GGG | 0.410703 | 3.1:-77059715 | MS.gene06375:intron |
ACTTGCAACAATTGCACTCC+TGG | 0.413027 | 3.1:-77060684 | MS.gene06375:intron |
ACCGCTTCTGATATTGATCC+AGG | 0.413768 | 3.1:+77060720 | None:intergenic |
CACTGTGGTTTCAGCTCCTA+AGG | 0.415875 | 3.1:+77066982 | None:intergenic |
CTCCGTCCTCGGTCACCTCA+TGG | 0.415907 | 3.1:-77070269 | MS.gene06375:CDS |
GCAACCAAGGTCTTCGAGTA+AGG | 0.416161 | 3.1:-77070369 | MS.gene06375:CDS |
GAAAATTTGGTGGGGTGGAT+GGG | 0.416182 | 3.1:+77067189 | None:intergenic |
AGACATCAGTGTCCACGATT+GGG | 0.417541 | 3.1:+77056049 | None:intergenic |
GTGTTTCACACCAACTAATC+TGG | 0.419328 | 3.1:-77065024 | MS.gene06375:intron |
TCATCATGTCCACCACCTCT+AGG | 0.420554 | 3.1:+77067225 | None:intergenic |
ACCAGATCTTAGAGCAGTTA+TGG | 0.422804 | 3.1:-77062792 | MS.gene06375:CDS |
TGGCCGTGGATCTCGTGGTA+GGG | 0.422988 | 3.1:-77056185 | MS.gene06375:CDS |
GGATATTAAGAGGACATTAG+AGG | 0.423141 | 3.1:-77070045 | MS.gene06375:CDS |
AGGGGATGGGGAGGATACTT+TGG | 0.428104 | 3.1:+77068807 | None:intergenic |
TTACCTCTGTTACAGAATAT+GGG | 0.428484 | 3.1:-77056290 | MS.gene06375:intron |
GAAGCCGTCGGTGGCGAAAT+CGG | 0.430539 | 3.1:-77070410 | MS.gene06375:CDS |
AGAAGTGTTGTCTGGCTCCC+TGG | 0.433929 | 3.1:-77060738 | MS.gene06375:CDS |
TCCATAACTGCTCTAAGATC+TGG | 0.434712 | 3.1:+77062791 | None:intergenic |
TAGACCTTGGGTTGGTATGA+TGG | 0.436659 | 3.1:+77058102 | None:intergenic |
AGTGATGAGCAGAATGGAAC+TGG | 0.439744 | 3.1:-77061746 | MS.gene06375:CDS |
CTTGAGTTATGGGCCTTGCC+AGG | 0.448133 | 3.1:-77069302 | MS.gene06375:intron |
TGGTGAAAGTAGCACCTATA+CGG | 0.448798 | 3.1:+77069392 | None:intergenic |
GCATCCAACCGTGGTCGAAA+TGG | 0.452609 | 3.1:-77056208 | MS.gene06375:CDS |
GCTCTCTTAATAGTAAGATT+CGG | 0.452863 | 3.1:+77069921 | None:intergenic |
ATTTGAACAGAGAAACTACT+TGG | 0.453097 | 3.1:-77066214 | MS.gene06375:intron |
TGTGTCTCAAAGCCGGCCTT+AGG | 0.457715 | 3.1:-77066998 | MS.gene06375:CDS |
GTGGCCGTGGATCTCGTGGT+AGG | 0.459589 | 3.1:-77056186 | MS.gene06375:CDS |
CTGGTTGATGCAGTAGACCT+TGG | 0.462492 | 3.1:+77058089 | None:intergenic |
TTTCGACCACGGTTGGATGC+TGG | 0.465860 | 3.1:+77056211 | None:intergenic |
GGATCAAGGGTCAATGTTGT+TGG | 0.465981 | 3.1:+77065317 | None:intergenic |
AAGGCGTTGCTAATTTCAGC+TGG | 0.470283 | 3.1:-77069091 | MS.gene06375:CDS |
TGGTTGATGCAGTAGACCTT+GGG | 0.471981 | 3.1:+77058090 | None:intergenic |
AGCCGATCTCTTCCAGGCTC+CGG | 0.472968 | 3.1:-77070200 | MS.gene06375:CDS |
TTTCTCCAAAGTCCCGCCCC+AGG | 0.474033 | 3.1:+77067249 | None:intergenic |
GCACAACGGTTGCTGGACCC+TGG | 0.475049 | 3.1:-77067267 | MS.gene06375:CDS |
ATGCTCTTCACCTCCGTCCT+CGG | 0.475163 | 3.1:-77070280 | MS.gene06375:CDS |
ACGGTTGCTGGACCCTGGGG+CGG | 0.476317 | 3.1:-77067262 | MS.gene06375:CDS |
GAATTCAACTACACCATTCG+AGG | 0.476492 | 3.1:-77070316 | MS.gene06375:CDS |
CGGTTGCTGGACCCTGGGGC+GGG | 0.479962 | 3.1:-77067261 | MS.gene06375:CDS |
GCGAACAAACTGCTTGCCTT+GGG | 0.482226 | 3.1:+77058048 | None:intergenic |
TGGCTACAGTTCCCTACGCT+TGG | 0.482965 | 3.1:-77069197 | MS.gene06375:intron |
CATCATGTCCACCACCTCTA+GGG | 0.487635 | 3.1:+77067226 | None:intergenic |
GAGACATCAGTGTCCACGAT+TGG | 0.488925 | 3.1:+77056048 | None:intergenic |
TGTTCACCGATAGCATAATT+CGG | 0.491455 | 3.1:+77066153 | None:intergenic |
AATTTGGTGGGGTGGATGGG+TGG | 0.492316 | 3.1:+77067192 | None:intergenic |
TTGCCTTGGGTTGGTATGAT+GGG | 0.492759 | 3.1:+77058061 | None:intergenic |
CTCAATAGTACTCAGGGGAT+GGG | 0.492929 | 3.1:+77068794 | None:intergenic |
CTTCACAGACTCGACGCTCC+AGG | 0.496741 | 3.1:-77057989 | MS.gene06375:CDS |
GGCCGTGGATCTCGTGGTAG+GGG | 0.497650 | 3.1:-77056184 | MS.gene06375:CDS |
TCAATAGTACTCAGGGGATG+GGG | 0.499301 | 3.1:+77068795 | None:intergenic |
TACGAGCTTACCAGATTAGT+TGG | 0.499833 | 3.1:+77065014 | None:intergenic |
GGAGGTGAAGAGCATTTGAC+AGG | 0.499944 | 3.1:+77070288 | None:intergenic |
GGTACCGGCTCCCGCATGCC+AGG | 0.500894 | 3.1:-77059305 | MS.gene06375:intron |
CGTGGTCGAAATGGTGGCCG+TGG | 0.503890 | 3.1:-77056199 | MS.gene06375:CDS |
GTTATTATAGGTTGCATTGG+TGG | 0.504357 | 3.1:-77059365 | MS.gene06375:intron |
ATGGATCTAATTCTTCTAAC+GGG | 0.507140 | 3.1:-77056156 | MS.gene06375:CDS |
AGTGCAATTGTTGCAAGTAT+TGG | 0.507817 | 3.1:+77060689 | None:intergenic |
CTCAAGCTCAATAGTACTCA+GGG | 0.508852 | 3.1:+77068788 | None:intergenic |
CTCCATGAGGTGACCGAGGA+CGG | 0.509112 | 3.1:+77070267 | None:intergenic |
AACAGTGTAGAAGTGTTGTC+TGG | 0.510106 | 3.1:-77060746 | MS.gene06375:intron |
AAGACATGCACCTACCCAAA+TGG | 0.513721 | 3.1:+77059701 | None:intergenic |
GCCACCATTTCGACCACGGT+TGG | 0.515814 | 3.1:+77056204 | None:intergenic |
TTGACAGGGTTGACCTCGAA+TGG | 0.516305 | 3.1:+77070303 | None:intergenic |
TTCTACGCATGTCTAACAAA+GGG | 0.516402 | 3.1:-77056620 | MS.gene06375:CDS |
AGACCTTGGGTTGGTATGAT+GGG | 0.517932 | 3.1:+77058103 | None:intergenic |
GAGCTCTGAGCGCACAATGA+AGG | 0.518579 | 3.1:-77068739 | MS.gene06375:intron |
TCCAGGAATCCCCAATATCC+TGG | 0.519396 | 3.1:-77057972 | MS.gene06375:CDS |
ACTAAGAAGAGGTGGTGGAT+TGG | 0.523465 | 3.1:+77065286 | None:intergenic |
GGAGCCTGGAAGAGATCGGC+TGG | 0.523556 | 3.1:+77070202 | None:intergenic |
CCCTACGCTTGGATTTGTTG+TGG | 0.526991 | 3.1:-77069186 | MS.gene06375:CDS |
TCATTCTCACCTTGTCCATA+CGG | 0.527284 | 3.1:+77065246 | None:intergenic |
TGTGTTATTATAGGTTGCAT+TGG | 0.529811 | 3.1:-77059368 | MS.gene06375:intron |
TGGTTCATTCCAGGATATTG+GGG | 0.530170 | 3.1:+77057963 | None:intergenic |
CAGGAAATAGATCTCCGTAT+AGG | 0.530642 | 3.1:-77069406 | MS.gene06375:CDS |
TCTCAAGCTCAATAGTACTC+AGG | 0.531785 | 3.1:+77068787 | None:intergenic |
CAGACCTGGCATGCGGGAGC+CGG | 0.534574 | 3.1:+77059301 | None:intergenic |
TTGAGACACATGCCAGGAAG+TGG | 0.535512 | 3.1:+77067011 | None:intergenic |
GTACTATTGAGCTTGAGAAA+CGG | 0.536291 | 3.1:-77068782 | MS.gene06375:CDS |
TTGATGCAGGGAAATCCATC+AGG | 0.539553 | 3.1:-77069655 | MS.gene06375:intron |
GCTCAATAGTACTCAGGGGA+TGG | 0.543858 | 3.1:+77068793 | None:intergenic |
CCGGCTTTGAGACACATGCC+AGG | 0.544203 | 3.1:+77067005 | None:intergenic |
ACAAACTGCTTGCCTTGGGT+TGG | 0.544791 | 3.1:+77058052 | None:intergenic |
TCTGTTGCATGCAGCTCGTG+TGG | 0.545763 | 3.1:-77056695 | MS.gene06375:CDS |
ACTTTGCCAAGAATCAGATA+TGG | 0.546914 | 3.1:-77061702 | MS.gene06375:CDS |
TTCATACAGACCTGGCATGC+GGG | 0.547866 | 3.1:+77059295 | None:intergenic |
AACAACAAGGGCATCCTGAG+TGG | 0.548017 | 3.1:-77067299 | MS.gene06375:CDS |
TCGGGAACGAATTTATGAAC+CGG | 0.548166 | 3.1:+77070181 | None:intergenic |
ACCACCTCTTCTTAGTGAAG+CGG | 0.548789 | 3.1:-77065279 | MS.gene06375:CDS |
TTCTCCAAAGTCCCGCCCCA+GGG | 0.549060 | 3.1:+77067250 | None:intergenic |
TTGCTGATGCTGTAGATGCT+AGG | 0.549077 | 3.1:-77069599 | MS.gene06375:CDS |
TATATCTATGATAGATGGGA+TGG | 0.550470 | 3.1:-77066186 | MS.gene06375:CDS |
GACATCAGTGTCCACGATTG+GGG | 0.551070 | 3.1:+77056050 | None:intergenic |
AGCGGATTTGCTGAGCCGTA+TGG | 0.551133 | 3.1:-77065261 | MS.gene06375:CDS |
ATCTTGTCGAGCCTAATAAG+TGG | 0.551354 | 3.1:-77069623 | MS.gene06375:CDS |
TCTTGCAGATTAAATAGAGT+TGG | 0.552153 | 3.1:-77061770 | MS.gene06375:intron |
CAGCAGAAAATTTGGTGGGG+TGG | 0.554124 | 3.1:+77067184 | None:intergenic |
ACAACATTGACCCTTGATCC+CGG | 0.560641 | 3.1:-77065314 | MS.gene06375:CDS |
TGTCTATATCTATGATAGAT+GGG | 0.560951 | 3.1:-77066190 | MS.gene06375:CDS |
TGGATGTCGTAGTTACCCTC+AGG | 0.561236 | 3.1:-77061253 | MS.gene06375:intron |
TGATGCTGTAGATGCTAGGC+AGG | 0.561764 | 3.1:-77069595 | MS.gene06375:intron |
GCAATTGTTGCAAGTATTGG+TGG | 0.562944 | 3.1:+77060692 | None:intergenic |
ACAACAAGGGCATCCTGAGT+GGG | 0.565557 | 3.1:-77067298 | MS.gene06375:CDS |
GTCATAGACACTGTTACAGA+TGG | 0.566110 | 3.1:-77069337 | MS.gene06375:CDS |
GTTATGGCGCGTCCACCCAT+TGG | 0.566662 | 3.1:+77070451 | None:intergenic |
GATATGAAATCAGTCAGTGA+AGG | 0.567015 | 3.1:-77062764 | MS.gene06375:CDS |
GATGAACTCAACAATGGCAG+TGG | 0.568984 | 3.1:-77056265 | MS.gene06375:CDS |
GCCACCGATTTCGCCACCGA+CGG | 0.570582 | 3.1:+77070406 | None:intergenic |
CGTCCCTTACTCGAAGACCT+TGG | 0.571511 | 3.1:+77070365 | None:intergenic |
CCTGGCATGTGTCTCAAAGC+CGG | 0.571543 | 3.1:-77067005 | MS.gene06375:CDS |
TTGACAGAAATATGTGGTAC+CGG | 0.572024 | 3.1:-77059320 | MS.gene06375:CDS |
GGGACATTCGTGTCAGCCAC+TGG | 0.573475 | 3.1:-77056136 | MS.gene06375:CDS |
ACAGTGGAAATTGACATTGC+TGG | 0.573505 | 3.1:-77066965 | MS.gene06375:CDS |
CAACATAAACACACCTGGCA+AGG | 0.574972 | 3.1:+77069289 | None:intergenic |
CAACCAAGGTCTTCGAGTAA+GGG | 0.576723 | 3.1:-77070368 | MS.gene06375:CDS |
GTGGTTTCAGCTCCTAAGGC+CGG | 0.577122 | 3.1:+77066986 | None:intergenic |
GAACTCAACAATGGCAGTGG+AGG | 0.578224 | 3.1:-77056262 | MS.gene06375:CDS |
TTCTCCAGCAGAAAATTTGG+TGG | 0.580669 | 3.1:+77067179 | None:intergenic |
TGGAGAAACCCTAGAGGTGG+TGG | 0.580833 | 3.1:-77067234 | MS.gene06375:CDS |
ATGATTCCGAATTATGCTAT+CGG | 0.582465 | 3.1:-77066159 | MS.gene06375:CDS |
AACCGGAGCCTGGAAGAGAT+CGG | 0.582929 | 3.1:+77070198 | None:intergenic |
AATGGATCTAATTCTTCTAA+CGG | 0.582931 | 3.1:-77056157 | MS.gene06375:CDS |
TGAACACTTACGGTTGCAGT+TGG | 0.583134 | 3.1:+77068926 | None:intergenic |
TCTCCAGCAGAAAATTTGGT+GGG | 0.584482 | 3.1:+77067180 | None:intergenic |
ATAGTACTCAGGGGATGGGG+AGG | 0.585440 | 3.1:+77068798 | None:intergenic |
AAAAGCATCTTTCATTAACA+TGG | 0.587316 | 3.1:+77069360 | None:intergenic |
GCTAATGTTTGCCCCAATCG+TGG | 0.587698 | 3.1:-77056061 | MS.gene06375:CDS |
TCCAACCGTGGTCGAAATGG+TGG | 0.588844 | 3.1:-77056205 | MS.gene06375:CDS |
CTTCTCCGCCACGTTTAGGA+CGG | 0.588923 | 3.1:+77070429 | None:intergenic |
TTTGTGGCTTGATTGCGATA+GGG | 0.588994 | 3.1:-77069994 | MS.gene06375:CDS |
TCTCGTGGTAGGGGTCGCAA+TGG | 0.589769 | 3.1:-77056175 | MS.gene06375:CDS |
CGCCATAACCGTCCTAAACG+TGG | 0.591771 | 3.1:-77070437 | MS.gene06375:CDS |
CAAACATTAGCAAAGTGAGA+TGG | 0.592978 | 3.1:+77056073 | None:intergenic |
TGTATAGGAGTGCATTGGTA+CGG | 0.593084 | 3.1:-77065114 | MS.gene06375:intron |
TGTTCTCATAGATCAGATGA+AGG | 0.594505 | 3.1:-77069110 | MS.gene06375:CDS |
CTGGAGCGTCGAGTCTGTGA+AGG | 0.596551 | 3.1:+77057990 | None:intergenic |
CCACAACAAATCCAAGCGTA+GGG | 0.598465 | 3.1:+77069186 | None:intergenic |
GTTGGCAGTGATGAGCAGAA+TGG | 0.601756 | 3.1:-77061752 | MS.gene06375:CDS |
TTGTGCGCTCAGAGCTCATG+CGG | 0.601824 | 3.1:+77068745 | None:intergenic |
CCCTGGATCAATATCAGAAG+CGG | 0.602820 | 3.1:-77060721 | MS.gene06375:CDS |
AACATACTCTCACGCAACCA+AGG | 0.603024 | 3.1:-77070382 | MS.gene06375:CDS |
ATTTGTTGTGGAAAGATACT+GGG | 0.603230 | 3.1:-77069174 | MS.gene06375:CDS |
GGACATTAGAGGAAGAAGCT+AGG | 0.605403 | 3.1:-77070034 | MS.gene06375:CDS |
GCAATTGTGCAAGAACAACA+AGG | 0.605847 | 3.1:-77067312 | MS.gene06375:CDS |
GTGATCCTATTTCTGACAGA+AGG | 0.607092 | 3.1:-77056114 | MS.gene06375:CDS |
TTTCTGCTGGAGAATCAGGA+TGG | 0.607893 | 3.1:-77067170 | MS.gene06375:CDS |
ATATGAAATCAGTCAGTGAA+GGG | 0.608953 | 3.1:-77062763 | MS.gene06375:CDS |
AGGTGGTGGACATGATGACC+AGG | 0.609876 | 3.1:-77067220 | MS.gene06375:CDS |
CTCCAGCAGAAAATTTGGTG+GGG | 0.610625 | 3.1:+77067181 | None:intergenic |
GTGATGAGCAGAATGGAACT+GGG | 0.610637 | 3.1:-77061745 | MS.gene06375:CDS |
CACGGCCACCATTTCGACCA+CGG | 0.611148 | 3.1:+77056200 | None:intergenic |
TGGTTGACATTGTAGCTTGG+TGG | 0.612034 | 3.1:+77059721 | None:intergenic |
TCCACAACAAATCCAAGCGT+AGG | 0.614617 | 3.1:+77069185 | None:intergenic |
GTTCTACGCATGTCTAACAA+AGG | 0.614821 | 3.1:-77056621 | MS.gene06375:CDS |
AATGGTGGCCGTGGATCTCG+TGG | 0.616242 | 3.1:-77056190 | MS.gene06375:CDS |
GCTTCACTAAGAAGAGGTGG+TGG | 0.616934 | 3.1:+77065281 | None:intergenic |
TGTGCATATATTCCCCACTC+AGG | 0.617094 | 3.1:+77067285 | None:intergenic |
TTTGCTGAGCCGTATGGACA+AGG | 0.617926 | 3.1:-77065255 | MS.gene06375:intron |
TTTGCAATTCGCAAAACACA+CGG | 0.618750 | 3.1:+77056668 | None:intergenic |
ACAATTGTATAGGAGTGCAT+TGG | 0.623633 | 3.1:-77065119 | MS.gene06375:intron |
AGGCGTTGCTAATTTCAGCT+GGG | 0.625767 | 3.1:-77069090 | MS.gene06375:CDS |
TCCGCTTCACTAAGAAGAGG+TGG | 0.626034 | 3.1:+77065278 | None:intergenic |
TGATGCAGTAGACCTTGGGT+TGG | 0.627683 | 3.1:+77058094 | None:intergenic |
AAGAAGCTAGGCGGTGTCAG+TGG | 0.631749 | 3.1:-77070022 | MS.gene06375:CDS |
GACCCCTACCACGAGATCCA+CGG | 0.633791 | 3.1:+77056182 | None:intergenic |
TGGCTTGATTGCGATAGGGA+AGG | 0.636553 | 3.1:-77069990 | MS.gene06375:CDS |
GGTTCATAAATTCGTTCCCG+AGG | 0.636955 | 3.1:-77070179 | MS.gene06375:intron |
ATTCATACAGACCTGGCATG+CGG | 0.637245 | 3.1:+77059294 | None:intergenic |
AAATGGTTGACATTGTAGCT+TGG | 0.638777 | 3.1:+77059718 | None:intergenic |
CATGAGGTGACCGAGGACGG+AGG | 0.638882 | 3.1:+77070270 | None:intergenic |
GATAACTGATAAAACCACCT+TGG | 0.639402 | 3.1:+77068129 | None:intergenic |
ATGTGGGAGGGTGATTCTAG+AGG | 0.642995 | 3.1:-77066927 | MS.gene06375:intron |
GTTCGCACTGTCAAGAAACA+GGG | 0.645630 | 3.1:-77058031 | MS.gene06375:CDS |
CCGCTTCTGATATTGATCCA+GGG | 0.647564 | 3.1:+77060721 | None:intergenic |
AAGTTATCAGTTTCTGTACG+AGG | 0.650574 | 3.1:+77068107 | None:intergenic |
GCCGTCGGTGGCGAAATCGG+TGG | 0.652223 | 3.1:-77070407 | MS.gene06375:CDS |
AAACGTGGCGGAGAAGCCGT+CGG | 0.653200 | 3.1:-77070422 | MS.gene06375:CDS |
TGTTATGGGATATGATGACA+TGG | 0.653335 | 3.1:-77064220 | MS.gene06375:CDS |
GCGTTGCTGGTTGATGCAGT+AGG | 0.654976 | 3.1:+77058125 | None:intergenic |
ACACAGTTGACAGAAATATG+TGG | 0.656276 | 3.1:-77059326 | MS.gene06375:CDS |
CAACAAGGGCATCCTGAGTG+GGG | 0.661234 | 3.1:-77067297 | MS.gene06375:CDS |
CGTGGCGGAGAAGCCGTCGG+TGG | 0.661549 | 3.1:-77070419 | MS.gene06375:CDS |
GAACTGGGGTAGTTGTTCGA+CGG | 0.664560 | 3.1:-77061730 | MS.gene06375:CDS |
ACAACGGTTGCTGGACCCTG+GGG | 0.669856 | 3.1:-77067265 | MS.gene06375:CDS |
CTTTGGAGAAACCCTAGAGG+TGG | 0.670933 | 3.1:-77067237 | MS.gene06375:CDS |
CAATTGTGCAAGAACAACAA+GGG | 0.671925 | 3.1:-77067311 | MS.gene06375:CDS |
ACAACAGAAACTGTATGAGT+TGG | 0.672041 | 3.1:-77067041 | MS.gene06375:intron |
AAATCCGCTTCACTAAGAAG+AGG | 0.673563 | 3.1:+77065275 | None:intergenic |
GTGCCTTCAGGTATAAACTG+TGG | 0.675508 | 3.1:-77062817 | MS.gene06375:intron |
ACGCCCATCATACCAACCCA+AGG | 0.676042 | 3.1:-77058064 | MS.gene06375:CDS |
GTCAGAAATAGGATCACCAG+TGG | 0.677928 | 3.1:+77056120 | None:intergenic |
ACGCCCATCATACCAACCCA+AGG | 0.681750 | 3.1:-77058106 | MS.gene06375:CDS |
GAGTCACCGTAACCAATGGG+TGG | 0.686245 | 3.1:-77070463 | None:intergenic |
AGCAATGTCAATTTCCACTG+TGG | 0.691502 | 3.1:+77066967 | None:intergenic |
AGGTGACAAAAGTAACACCA+AGG | 0.692380 | 3.1:-77068836 | MS.gene06375:CDS |
GGTGACAAAAGTAACACCAA+GGG | 0.692729 | 3.1:-77068835 | MS.gene06375:CDS |
TGGGAGGATGAACTCAACAA+TGG | 0.692966 | 3.1:-77056271 | MS.gene06375:CDS |
CAAGGTCTTCGAGTAAGGGA+CGG | 0.694430 | 3.1:-77070364 | MS.gene06375:CDS |
GAGGTGAAGAGCATTTGACA+GGG | 0.696749 | 3.1:+77070289 | None:intergenic |
CCTCTGTTACAGAATATGGG+AGG | 0.698919 | 3.1:-77056287 | MS.gene06375:intron |
GCTCATGCGGAAGTATCGTG+AGG | 0.700588 | 3.1:+77068758 | None:intergenic |
CAAGCTCCATGAGGTGACCG+AGG | 0.701223 | 3.1:+77070263 | None:intergenic |
TCTACGCATGTCTAACAAAG+GGG | 0.704307 | 3.1:-77056619 | MS.gene06375:CDS |
GTTATGGGATATGATGACAT+GGG | 0.706693 | 3.1:-77064219 | MS.gene06375:CDS |
GACAGAAGGTGCTATACATG+TGG | 0.711532 | 3.1:-77056100 | MS.gene06375:CDS |
CATTAGAGGAAGAAGCTAGG+CGG | 0.714956 | 3.1:-77070031 | MS.gene06375:CDS |
AGTACTCCAGCATCCAACCG+TGG | 0.718670 | 3.1:-77056217 | MS.gene06375:CDS |
CGTCGAAGTCAAGCTCCATG+AGG | 0.719905 | 3.1:+77070254 | None:intergenic |
GTGGCAGAAGAACTCTACCA+AGG | 0.723450 | 3.1:-77068146 | MS.gene06375:CDS |
TGATGAGCAGAATGGAACTG+GGG | 0.724666 | 3.1:-77061744 | MS.gene06375:CDS |
TCAAGCTCAATAGTACTCAG+GGG | 0.728007 | 3.1:+77068789 | None:intergenic |
AATATATGAGATGTGCATCG+AGG | 0.728640 | 3.1:-77068951 | MS.gene06375:CDS |
CATAACCGTCCTAAACGTGG+CGG | 0.734591 | 3.1:-77070434 | MS.gene06375:CDS |
TTATGGGATATGATGACATG+GGG | 0.743285 | 3.1:-77064218 | MS.gene06375:intron |
AGTGGGGAATATATGCACAA+CGG | 0.747288 | 3.1:-77067281 | MS.gene06375:CDS |
GCAGAAGAACTCTACCAAGG+TGG | 0.750268 | 3.1:-77068143 | MS.gene06375:CDS |
GGACTTTGGAGAAACCCTAG+AGG | 0.766268 | 3.1:-77067240 | MS.gene06375:CDS |
CTTAGGAGCTGAAACCACAG+TGG | 0.789942 | 3.1:-77066981 | MS.gene06375:CDS |
AGTTATCGATGTGTGTACTG+CGG | 0.798572 | 3.1:-77069949 | MS.gene06375:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 77056054 | 77070470 | 77056054 | ID=MS.gene06375 |
chr3.1 | mRNA | 77056054 | 77070470 | 77056054 | ID=MS.gene06375.t1;Parent=MS.gene06375 |
chr3.1 | exon | 77070180 | 77070470 | 77070180 | ID=MS.gene06375.t1.exon1;Parent=MS.gene06375.t1 |
chr3.1 | CDS | 77070180 | 77070470 | 77070180 | ID=cds.MS.gene06375.t1;Parent=MS.gene06375.t1 |
chr3.1 | exon | 77069897 | 77070075 | 77069897 | ID=MS.gene06375.t1.exon2;Parent=MS.gene06375.t1 |
chr3.1 | CDS | 77069897 | 77070075 | 77069897 | ID=cds.MS.gene06375.t1;Parent=MS.gene06375.t1 |
chr3.1 | exon | 77069596 | 77069668 | 77069596 | ID=MS.gene06375.t1.exon3;Parent=MS.gene06375.t1 |
chr3.1 | CDS | 77069596 | 77069668 | 77069596 | ID=cds.MS.gene06375.t1;Parent=MS.gene06375.t1 |
chr3.1 | exon | 77069303 | 77069425 | 77069303 | ID=MS.gene06375.t1.exon4;Parent=MS.gene06375.t1 |
chr3.1 | CDS | 77069303 | 77069425 | 77069303 | ID=cds.MS.gene06375.t1;Parent=MS.gene06375.t1 |
chr3.1 | exon | 77069089 | 77069210 | 77069089 | ID=MS.gene06375.t1.exon5;Parent=MS.gene06375.t1 |
chr3.1 | CDS | 77069089 | 77069210 | 77069089 | ID=cds.MS.gene06375.t1;Parent=MS.gene06375.t1 |
chr3.1 | exon | 77068937 | 77069009 | 77068937 | ID=MS.gene06375.t1.exon6;Parent=MS.gene06375.t1 |
chr3.1 | CDS | 77068937 | 77069009 | 77068937 | ID=cds.MS.gene06375.t1;Parent=MS.gene06375.t1 |
chr3.1 | exon | 77068740 | 77068856 | 77068740 | ID=MS.gene06375.t1.exon7;Parent=MS.gene06375.t1 |
chr3.1 | CDS | 77068740 | 77068856 | 77068740 | ID=cds.MS.gene06375.t1;Parent=MS.gene06375.t1 |
chr3.1 | exon | 77068085 | 77068168 | 77068085 | ID=MS.gene06375.t1.exon8;Parent=MS.gene06375.t1 |
chr3.1 | CDS | 77068085 | 77068168 | 77068085 | ID=cds.MS.gene06375.t1;Parent=MS.gene06375.t1 |
chr3.1 | exon | 77067155 | 77067334 | 77067155 | ID=MS.gene06375.t1.exon9;Parent=MS.gene06375.t1 |
chr3.1 | CDS | 77067155 | 77067334 | 77067155 | ID=cds.MS.gene06375.t1;Parent=MS.gene06375.t1 |
chr3.1 | exon | 77066928 | 77067056 | 77066928 | ID=MS.gene06375.t1.exon10;Parent=MS.gene06375.t1 |
chr3.1 | CDS | 77066928 | 77067056 | 77066928 | ID=cds.MS.gene06375.t1;Parent=MS.gene06375.t1 |
chr3.1 | exon | 77066152 | 77066226 | 77066152 | ID=MS.gene06375.t1.exon11;Parent=MS.gene06375.t1 |
chr3.1 | CDS | 77066152 | 77066226 | 77066152 | ID=cds.MS.gene06375.t1;Parent=MS.gene06375.t1 |
chr3.1 | exon | 77065256 | 77065345 | 77065256 | ID=MS.gene06375.t1.exon12;Parent=MS.gene06375.t1 |
chr3.1 | CDS | 77065256 | 77065345 | 77065256 | ID=cds.MS.gene06375.t1;Parent=MS.gene06375.t1 |
chr3.1 | exon | 77065025 | 77065129 | 77065025 | ID=MS.gene06375.t1.exon13;Parent=MS.gene06375.t1 |
chr3.1 | CDS | 77065025 | 77065129 | 77065025 | ID=cds.MS.gene06375.t1;Parent=MS.gene06375.t1 |
chr3.1 | exon | 77064219 | 77064253 | 77064219 | ID=MS.gene06375.t1.exon14;Parent=MS.gene06375.t1 |
chr3.1 | CDS | 77064219 | 77064253 | 77064219 | ID=cds.MS.gene06375.t1;Parent=MS.gene06375.t1 |
chr3.1 | exon | 77062700 | 77062829 | 77062700 | ID=MS.gene06375.t1.exon15;Parent=MS.gene06375.t1 |
chr3.1 | CDS | 77062700 | 77062829 | 77062700 | ID=cds.MS.gene06375.t1;Parent=MS.gene06375.t1 |
chr3.1 | exon | 77061859 | 77061911 | 77061859 | ID=MS.gene06375.t1.exon16;Parent=MS.gene06375.t1 |
chr3.1 | CDS | 77061859 | 77061911 | 77061859 | ID=cds.MS.gene06375.t1;Parent=MS.gene06375.t1 |
chr3.1 | exon | 77061685 | 77061784 | 77061685 | ID=MS.gene06375.t1.exon17;Parent=MS.gene06375.t1 |
chr3.1 | CDS | 77061685 | 77061784 | 77061685 | ID=cds.MS.gene06375.t1;Parent=MS.gene06375.t1 |
chr3.1 | exon | 77061254 | 77061292 | 77061254 | ID=MS.gene06375.t1.exon18;Parent=MS.gene06375.t1 |
chr3.1 | CDS | 77061254 | 77061292 | 77061254 | ID=cds.MS.gene06375.t1;Parent=MS.gene06375.t1 |
chr3.1 | exon | 77060685 | 77060763 | 77060685 | ID=MS.gene06375.t1.exon19;Parent=MS.gene06375.t1 |
chr3.1 | CDS | 77060685 | 77060763 | 77060685 | ID=cds.MS.gene06375.t1;Parent=MS.gene06375.t1 |
chr3.1 | exon | 77059716 | 77059787 | 77059716 | ID=MS.gene06375.t1.exon20;Parent=MS.gene06375.t1 |
chr3.1 | CDS | 77059716 | 77059787 | 77059716 | ID=cds.MS.gene06375.t1;Parent=MS.gene06375.t1 |
chr3.1 | exon | 77059306 | 77059377 | 77059306 | ID=MS.gene06375.t1.exon21;Parent=MS.gene06375.t1 |
chr3.1 | CDS | 77059306 | 77059377 | 77059306 | ID=cds.MS.gene06375.t1;Parent=MS.gene06375.t1 |
chr3.1 | exon | 77057955 | 77058161 | 77057955 | ID=MS.gene06375.t1.exon22;Parent=MS.gene06375.t1 |
chr3.1 | CDS | 77057955 | 77058161 | 77057955 | ID=cds.MS.gene06375.t1;Parent=MS.gene06375.t1 |
chr3.1 | exon | 77056605 | 77056725 | 77056605 | ID=MS.gene06375.t1.exon23;Parent=MS.gene06375.t1 |
chr3.1 | CDS | 77056605 | 77056725 | 77056605 | ID=cds.MS.gene06375.t1;Parent=MS.gene06375.t1 |
chr3.1 | exon | 77056054 | 77056297 | 77056054 | ID=MS.gene06375.t1.exon24;Parent=MS.gene06375.t1 |
chr3.1 | CDS | 77056054 | 77056297 | 77056054 | ID=cds.MS.gene06375.t1;Parent=MS.gene06375.t1 |
Gene Sequence |
Protein sequence |