Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070800.t1 | XP_013455688.1 | 93.7 | 666 | 10 | 1 | 1 | 634 | 1 | 666 | 0.00E+00 | 1230.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070800.t1 | Q564K3 | 56.3 | 675 | 242 | 11 | 1 | 627 | 1 | 670 | 6.9e-193 | 675.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070800.t1 | A0A072UIX9 | 93.7 | 666 | 10 | 1 | 1 | 634 | 1 | 666 | 0.0e+00 | 1230.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049250 | MS.gene070800 | 0.803818 | 2.91E-49 | -1.69E-46 |
| MS.gene049251 | MS.gene070800 | 0.820814 | 5.62E-53 | -1.69E-46 |
| MS.gene049298 | MS.gene070800 | 0.80337 | 3.60E-49 | -1.69E-46 |
| MS.gene049989 | MS.gene070800 | 0.815573 | 8.62E-52 | -1.69E-46 |
| MS.gene050874 | MS.gene070800 | 0.811573 | 6.54E-51 | -1.69E-46 |
| MS.gene050875 | MS.gene070800 | 0.838594 | 2.62E-57 | -1.69E-46 |
| MS.gene05124 | MS.gene070800 | 0.827881 | 1.22E-54 | -1.69E-46 |
| MS.gene051816 | MS.gene070800 | 0.814555 | 1.45E-51 | -1.69E-46 |
| MS.gene051896 | MS.gene070800 | 0.815335 | 9.75E-52 | -1.69E-46 |
| MS.gene051914 | MS.gene070800 | 0.894162 | 3.20E-75 | -1.69E-46 |
| MS.gene051955 | MS.gene070800 | 0.810516 | 1.11E-50 | -1.69E-46 |
| MS.gene052143 | MS.gene070800 | 0.802379 | 5.77E-49 | -1.69E-46 |
| MS.gene052308 | MS.gene070800 | 0.861248 | 1.17E-63 | -1.69E-46 |
| MS.gene052367 | MS.gene070800 | 0.840546 | 8.15E-58 | -1.69E-46 |
| MS.gene053173 | MS.gene070800 | 0.899577 | 1.73E-77 | -1.69E-46 |
| MS.gene053348 | MS.gene070800 | 0.88031 | 6.10E-70 | -1.69E-46 |
| MS.gene053416 | MS.gene070800 | 0.833213 | 6.07E-56 | -1.69E-46 |
| MS.gene053417 | MS.gene070800 | 0.828173 | 1.04E-54 | -1.69E-46 |
| MS.gene05369 | MS.gene070800 | 0.805487 | 1.30E-49 | -1.69E-46 |
| MS.gene054018 | MS.gene070800 | 0.820499 | 6.64E-53 | -1.69E-46 |
| MS.gene054457 | MS.gene070800 | 0.80097 | 1.12E-48 | -1.69E-46 |
| MS.gene054459 | MS.gene070800 | 0.822807 | 1.94E-53 | -1.69E-46 |
| MS.gene054551 | MS.gene070800 | 0.907043 | 7.75E-81 | -1.69E-46 |
| MS.gene054552 | MS.gene070800 | 0.83111 | 2.01E-55 | -1.69E-46 |
| MS.gene054593 | MS.gene070800 | 0.905299 | 4.97E-80 | -1.69E-46 |
| MS.gene054633 | MS.gene070800 | 0.851957 | 6.33E-61 | -1.69E-46 |
| MS.gene054662 | MS.gene070800 | 0.851724 | 7.37E-61 | -1.69E-46 |
| MS.gene054885 | MS.gene070800 | 0.814437 | 1.54E-51 | -1.69E-46 |
| MS.gene055308 | MS.gene070800 | 0.884324 | 2.11E-71 | -1.69E-46 |
| MS.gene055578 | MS.gene070800 | 0.862913 | 3.62E-64 | -1.69E-46 |
| MS.gene055957 | MS.gene070800 | 0.83495 | 2.23E-56 | -1.69E-46 |
| MS.gene056041 | MS.gene070800 | 0.886682 | 2.77E-72 | -1.69E-46 |
| MS.gene05640 | MS.gene070800 | 0.91236 | 2.13E-83 | -1.69E-46 |
| MS.gene056526 | MS.gene070800 | 0.827303 | 1.69E-54 | -1.69E-46 |
| MS.gene056528 | MS.gene070800 | 0.841631 | 4.23E-58 | -1.69E-46 |
| MS.gene05652 | MS.gene070800 | 0.844094 | 9.35E-59 | -1.69E-46 |
| MS.gene05732 | MS.gene070800 | 0.805947 | 1.04E-49 | -1.69E-46 |
| MS.gene057358 | MS.gene070800 | 0.802166 | 6.38E-49 | -1.69E-46 |
| MS.gene057367 | MS.gene070800 | 0.859081 | 5.29E-63 | -1.69E-46 |
| MS.gene057458 | MS.gene070800 | 0.865317 | 6.45E-65 | -1.69E-46 |
| MS.gene057669 | MS.gene070800 | 0.814478 | 1.51E-51 | -1.69E-46 |
| MS.gene058013 | MS.gene070800 | 0.869706 | 2.53E-66 | -1.69E-46 |
| MS.gene058128 | MS.gene070800 | 0.879823 | 9.09E-70 | -1.69E-46 |
| MS.gene058789 | MS.gene070800 | 0.81174 | 6.02E-51 | -1.69E-46 |
| MS.gene058849 | MS.gene070800 | 0.800541 | 1.37E-48 | -1.69E-46 |
| MS.gene058853 | MS.gene070800 | 0.873413 | 1.50E-67 | -1.69E-46 |
| MS.gene059553 | MS.gene070800 | 0.86389 | 1.80E-64 | -1.69E-46 |
| MS.gene059616 | MS.gene070800 | 0.832411 | 9.60E-56 | -1.69E-46 |
| MS.gene060473 | MS.gene070800 | 0.83841 | 2.92E-57 | -1.69E-46 |
| MS.gene060565 | MS.gene070800 | 0.829869 | 4.04E-55 | -1.69E-46 |
| MS.gene06093 | MS.gene070800 | 0.912501 | 1.81E-83 | -1.69E-46 |
| MS.gene061099 | MS.gene070800 | 0.856128 | 3.96E-62 | -1.69E-46 |
| MS.gene061260 | MS.gene070800 | 0.85768 | 1.38E-62 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene066477 | MS.gene070800 | PPI |
| MS.gene070800 | MS.gene69993 | PPI |
| MS.gene016667 | MS.gene070800 | PPI |
| MS.gene070800 | MS.gene95250 | PPI |
| MS.gene070800 | MS.gene014108 | PPI |
| MS.gene070800 | MS.gene056169 | PPI |
| MS.gene070800 | MS.gene024068 | PPI |
| MS.gene070800 | MS.gene017879 | PPI |
| MS.gene070800 | MS.gene42530 | PPI |
| MS.gene070800 | MS.gene040722 | PPI |
| MS.gene073698 | MS.gene070800 | PPI |
| MS.gene39049 | MS.gene070800 | PPI |
| MS.gene070800 | MS.gene033508 | PPI |
| MS.gene070800 | MS.gene23837 | PPI |
| MS.gene070800 | MS.gene84088 | PPI |
| MS.gene45748 | MS.gene070800 | PPI |
| MS.gene070800 | MS.gene99578 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070800.t1 | MTR_4g050060 | 93.694 | 666 | 10 | 1 | 1 | 634 | 1 | 666 | 0.0 | 1269 |
| MS.gene070800.t1 | MTR_2g087880 | 62.085 | 662 | 210 | 7 | 1 | 628 | 1 | 655 | 0.0 | 801 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070800.t1 | AT2G32590 | 54.896 | 674 | 253 | 11 | 1 | 627 | 1 | 670 | 0.0 | 672 |
Find 162 sgRNAs with CRISPR-Local
Find 321 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTTGTCTGCCTAGGTTTC+AGG | 0.092734 | 4.4:-52141609 | None:intergenic |
| TTGCAAGGCGGTCTGCTTTC+AGG | 0.102056 | 4.4:-52141733 | None:intergenic |
| CTGAAATATCAGGTTCATTT+TGG | 0.156942 | 4.4:-52140785 | None:intergenic |
| AGTATCTTTCAAGAATTTAT+TGG | 0.201745 | 4.4:+52142795 | MS.gene070800:CDS |
| TCATCTTACTGATATTATTA+AGG | 0.247167 | 4.4:+52138731 | MS.gene070800:CDS |
| TGTAACCTTGCTCAGCTTCT+TGG | 0.257914 | 4.4:-52140020 | None:intergenic |
| TGGGTTCTTATTCTTGAGTC+TGG | 0.268269 | 4.4:+52141394 | MS.gene070800:CDS |
| CAAGCTCTTCCGCTGAATTC+TGG | 0.278212 | 4.4:-52141046 | None:intergenic |
| TTCAGGGAGAAGTAATGTTT+TGG | 0.290998 | 4.4:-52141716 | None:intergenic |
| AAGTGCTAAAAGTTACTCTT+TGG | 0.303784 | 4.4:+52142490 | MS.gene070800:CDS |
| CCCACCAGCCCCTTCATCTT+AGG | 0.305865 | 4.4:+52138410 | MS.gene070800:CDS |
| CTTTGTCTGCCTAGGTTTCA+GGG | 0.320733 | 4.4:-52141608 | None:intergenic |
| ATGAATAATCTCGGTGTATA+TGG | 0.321638 | 4.4:+52140708 | MS.gene070800:CDS |
| TGTTAAGCTTCCTCCTGTTC+AGG | 0.321639 | 4.4:+52142530 | MS.gene070800:CDS |
| TGTTCTTTCTTTAGTGTCTT+GGG | 0.322608 | 4.4:+52141944 | MS.gene070800:intron |
| TGTCAAGCTATTTCTGCTTC+CGG | 0.326664 | 4.4:+52141798 | MS.gene070800:CDS |
| CGTCAAATTTCGCAGTTGTC+TGG | 0.327918 | 4.4:-52140662 | None:intergenic |
| TGAAGGGGCTGGTGGGAGAT+TGG | 0.337792 | 4.4:-52138403 | None:intergenic |
| ATGTTCTTTCTTTAGTGTCT+TGG | 0.342141 | 4.4:+52141943 | MS.gene070800:intron |
| AGAACGATCCATTCCCTTCT+TGG | 0.343798 | 4.4:+52142143 | MS.gene070800:CDS |
| GAGGGTGTTAATGTTGAAAA+TGG | 0.347394 | 4.4:+52140341 | MS.gene070800:CDS |
| TTCTTTAGTGTCTTGGGAGG+AGG | 0.350205 | 4.4:+52141950 | MS.gene070800:intron |
| CACTTGAACATCAACCTGTT+TGG | 0.351903 | 4.4:-52142472 | None:intergenic |
| CAGGAAAGAGACAGATAAAA+AGG | 0.352537 | 4.4:+52140376 | MS.gene070800:CDS |
| CATCCAAGTTGGGGAAGCTT+TGG | 0.353845 | 4.4:-52142924 | None:intergenic |
| GATTGGATGCGTGCAGCAAC+TGG | 0.360001 | 4.4:-52138386 | None:intergenic |
| TGGCTTTCCATACACTTTGC+AGG | 0.360381 | 4.4:-52140765 | None:intergenic |
| AGCAACTGGGAGACGGAGTT+TGG | 0.372750 | 4.4:-52138372 | None:intergenic |
| GTGCTTGAGCGCGTTCGAGC+TGG | 0.376233 | 4.4:-52138445 | None:intergenic |
| GGCTGGTAGTGGCAGTCCTC+TGG | 0.378165 | 4.4:-52141766 | None:intergenic |
| CTTCATATGTCTACTGCATT+TGG | 0.388124 | 4.4:+52142879 | MS.gene070800:CDS |
| TTTAGATTTCACAAATTCTC+TGG | 0.397573 | 4.4:+52141654 | MS.gene070800:CDS |
| CATGGGCAGGCCCTGATCAT+TGG | 0.402102 | 4.4:+52141438 | MS.gene070800:CDS |
| TCGCAGTTGTCTGGCGATAG+AGG | 0.402631 | 4.4:-52140653 | None:intergenic |
| TTATTCACTCAGGGTGGATT+CGG | 0.402739 | 4.4:+52139951 | MS.gene070800:CDS |
| ATTATTCATTAAAAGACCTT+TGG | 0.404876 | 4.4:-52140694 | None:intergenic |
| CAACCAGTCATTGCTGATCT+AGG | 0.406386 | 4.4:+52141149 | MS.gene070800:CDS |
| TCCCTCCACAGACTCTGATA+TGG | 0.414277 | 4.4:+52141349 | MS.gene070800:CDS |
| CGACAAACCTGAGGATAACT+AGG | 0.415999 | 4.4:-52141197 | None:intergenic |
| TGCAAGGCGGTCTGCTTTCA+GGG | 0.424847 | 4.4:-52141732 | None:intergenic |
| CTCAATGTAAAGAAGTTTGA+TGG | 0.425467 | 4.4:+52140516 | MS.gene070800:CDS |
| GGGTTCTTATTCTTGAGTCT+GGG | 0.426834 | 4.4:+52141395 | MS.gene070800:CDS |
| AGTGCTAAAAGTTACTCTTT+GGG | 0.428131 | 4.4:+52142491 | MS.gene070800:CDS |
| GACAGATTTGAAAATGTTGA+TGG | 0.428226 | 4.4:+52141374 | MS.gene070800:CDS |
| TCAATGGTATCTGAAATATC+AGG | 0.428943 | 4.4:-52140795 | None:intergenic |
| GAACGATCCATTCCCTTCTT+GGG | 0.430080 | 4.4:+52142144 | MS.gene070800:CDS |
| ATTGAAAGATCATCCAAGTT+GGG | 0.430730 | 4.4:-52142934 | None:intergenic |
| AGAAGTACCTGCAAAGTGTA+TGG | 0.431967 | 4.4:+52140758 | MS.gene070800:CDS |
| CTGCATTTGGCAAATGAGAA+AGG | 0.433961 | 4.4:+52142892 | MS.gene070800:CDS |
| GACGGAGTTTGGTAGGGCTA+AGG | 0.455399 | 4.4:-52138361 | None:intergenic |
| TCAATATGCCTTCCACCTGT+TGG | 0.459277 | 4.4:+52142952 | MS.gene070800:CDS |
| TATCCAAAGCTTCCCCAACT+TGG | 0.459993 | 4.4:+52142921 | MS.gene070800:CDS |
| TTCTTAGTCTTTGTCTGCCT+AGG | 0.462830 | 4.4:-52141616 | None:intergenic |
| GGGCTAAGGGTTTCCGCCAT+TGG | 0.465043 | 4.4:-52138347 | None:intergenic |
| CGCAGTTGTCTGGCGATAGA+GGG | 0.465933 | 4.4:-52140652 | None:intergenic |
| CAAGTTCCTCTGGCTGGTAG+TGG | 0.466861 | 4.4:-52141777 | None:intergenic |
| GAAAATAATAAAAGACCTAC+TGG | 0.469483 | 4.4:+52141008 | MS.gene070800:CDS |
| TGAGGATAACTAGGGAAACT+TGG | 0.476403 | 4.4:-52141188 | None:intergenic |
| TCTTCCGCTGAATTCTGGCC+AGG | 0.480249 | 4.4:-52141041 | None:intergenic |
| TCTTTAGTGTCTTGGGAGGA+GGG | 0.481315 | 4.4:+52141951 | MS.gene070800:intron |
| GTTCAACCTACTTCCGAAGA+TGG | 0.485975 | 4.4:+52141580 | MS.gene070800:CDS |
| AAGTTTCCCTAGTTATCCTC+AGG | 0.486215 | 4.4:+52141190 | MS.gene070800:CDS |
| GTTGACCCATCTTCGGAAGT+AGG | 0.486447 | 4.4:-52141586 | None:intergenic |
| TTTCAGGGTTGACCCATCTT+CGG | 0.487534 | 4.4:-52141593 | None:intergenic |
| GTGTCAAAATTTATTCACTC+AGG | 0.492694 | 4.4:+52139941 | MS.gene070800:CDS |
| TGTGAAATCTAAATCAACTT+CGG | 0.494252 | 4.4:-52141644 | None:intergenic |
| GCAAGCTGCACTCTTGAGGC+CGG | 0.496144 | 4.4:+52139919 | MS.gene070800:CDS |
| GTCATTGGAACCTAAGATGA+AGG | 0.503834 | 4.4:-52138420 | None:intergenic |
| ATGGGTCAACCCTGAAACCT+AGG | 0.504650 | 4.4:+52141599 | MS.gene070800:CDS |
| GCGTTCGAGCTGGTCGTCAT+TGG | 0.505694 | 4.4:-52138435 | None:intergenic |
| GTATGACAAAACGTCCAAAC+AGG | 0.507130 | 4.4:+52142458 | MS.gene070800:CDS |
| TTAATTCAAAACATAATGCA+TGG | 0.511883 | 4.4:+52141420 | MS.gene070800:CDS |
| AATTAATGAGTATCACCAAC+AGG | 0.512465 | 4.4:-52142967 | None:intergenic |
| CCATTCCCTTCTTGGGACAA+TGG | 0.512756 | 4.4:+52142151 | MS.gene070800:CDS |
| TCTTATTACACAGCCACGTC+AGG | 0.513647 | 4.4:+52142246 | MS.gene070800:CDS |
| GTCATCATGATCGTCACTCC+AGG | 0.515674 | 4.4:-52141126 | None:intergenic |
| TCAAAACATAATGCATGGGC+AGG | 0.517029 | 4.4:+52141425 | MS.gene070800:CDS |
| GCAGGCAAGCTGCACTCTTG+AGG | 0.517638 | 4.4:+52139915 | MS.gene070800:intron |
| ACCTAAGATGAAGGGGCTGG+TGG | 0.518162 | 4.4:-52138411 | None:intergenic |
| TCTGAGGCATATAAAGTCCT+TGG | 0.519724 | 4.4:+52139979 | MS.gene070800:CDS |
| AATGTTGAAAATGGACAAGA+AGG | 0.520677 | 4.4:+52140350 | MS.gene070800:CDS |
| GGTGCATTTGCAGATGCAGA+TGG | 0.520905 | 4.4:+52142100 | MS.gene070800:intron |
| ACGGAGTTTGGTAGGGCTAA+GGG | 0.522028 | 4.4:-52138360 | None:intergenic |
| GGCTGTGTAATAAGAGTGCC+TGG | 0.522506 | 4.4:-52142238 | None:intergenic |
| AATAGCTTGACAAGTTCCTC+TGG | 0.524415 | 4.4:-52141787 | None:intergenic |
| GCACTTCCATTGTCCCAAGA+AGG | 0.532754 | 4.4:-52142157 | None:intergenic |
| AAAATGGACAAGAAGGAAGC+AGG | 0.532831 | 4.4:+52140357 | MS.gene070800:CDS |
| ACTGGGAGACGGAGTTTGGT+AGG | 0.533071 | 4.4:-52138368 | None:intergenic |
| CCTAAGATGAAGGGGCTGGT+GGG | 0.534868 | 4.4:-52138410 | None:intergenic |
| GCAGCGGCATTGCATTCACC+TGG | 0.536954 | 4.4:-52142826 | None:intergenic |
| TATTGAAAGATCATCCAAGT+TGG | 0.537530 | 4.4:-52142935 | None:intergenic |
| GGTGGATTCGGTTCATTCTG+AGG | 0.540337 | 4.4:+52139963 | MS.gene070800:CDS |
| AATATGACAATGGCGCGACC+TGG | 0.541035 | 4.4:+52141108 | MS.gene070800:CDS |
| GCTTGACAAGTTCCTCTGGC+TGG | 0.543855 | 4.4:-52141783 | None:intergenic |
| GTTGTCACCTTTGTCAACAC+TGG | 0.545624 | 4.4:+52140476 | MS.gene070800:intron |
| AATTGTGAAAATGGCGCTGA+CGG | 0.546346 | 4.4:+52141080 | MS.gene070800:CDS |
| CACTTCCATTGTCCCAAGAA+GGG | 0.551439 | 4.4:-52142156 | None:intergenic |
| TTTACTATAGTCCTCAGAGT+TGG | 0.551477 | 4.4:-52140975 | None:intergenic |
| TTACTTTGTTGTAGTCTCTG+AGG | 0.553886 | 4.4:+52141558 | MS.gene070800:intron |
| ATTCTTGCGGCGGATAGCAG+CGG | 0.556570 | 4.4:-52138480 | None:intergenic |
| CATAGTGACATAGAGGATCC+AGG | 0.556836 | 4.4:+52142220 | MS.gene070800:CDS |
| TTCAACCTACTTCCGAAGAT+GGG | 0.557125 | 4.4:+52141581 | MS.gene070800:CDS |
| GCTTGCGGTGGCGATGAGGC+TGG | 0.559269 | 4.4:+52142178 | MS.gene070800:CDS |
| TTTCTTTGTAGATTGTGTTG+AGG | 0.563094 | 4.4:+52140914 | MS.gene070800:intron |
| TAATTCAAAACATAATGCAT+GGG | 0.563594 | 4.4:+52141421 | MS.gene070800:CDS |
| TGCGTGCAGCAACTGGGAGA+CGG | 0.567565 | 4.4:-52138379 | None:intergenic |
| ATTTCTGCTTCCGGATGTGA+AGG | 0.568316 | 4.4:+52141807 | MS.gene070800:CDS |
| ACAGATTTGAAAATGTTGAT+GGG | 0.569312 | 4.4:+52141375 | MS.gene070800:CDS |
| TCTGGCAAAAGAAAGATCAA+TGG | 0.571169 | 4.4:-52140811 | None:intergenic |
| GAGCCTAGATCAGCAATGAC+TGG | 0.571335 | 4.4:-52141152 | None:intergenic |
| GAGGCATATAAAGTCCTTGG+TGG | 0.572960 | 4.4:+52139982 | MS.gene070800:CDS |
| CTAGATCAGCAATGACTGGT+TGG | 0.573390 | 4.4:-52141148 | None:intergenic |
| GGAACCTAAGATGAAGGGGC+TGG | 0.579975 | 4.4:-52138414 | None:intergenic |
| TGTCAAAATTTATTCACTCA+GGG | 0.580906 | 4.4:+52139942 | MS.gene070800:CDS |
| CAAAATTTATTCACTCAGGG+TGG | 0.582175 | 4.4:+52139945 | MS.gene070800:CDS |
| TACCTTCTGAAAATTAGTCT+CGG | 0.586056 | 4.4:-52138772 | None:intergenic |
| GTCATCCATATCAGAGTCTG+TGG | 0.588088 | 4.4:-52141354 | None:intergenic |
| TCATTGGAACCTAAGATGAA+GGG | 0.589350 | 4.4:-52138419 | None:intergenic |
| CTTGGTGGGATGAATAGAGC+AGG | 0.590604 | 4.4:+52139997 | MS.gene070800:CDS |
| TTTGACGAAGGAGGAGCCAA+AGG | 0.590682 | 4.4:+52140678 | MS.gene070800:CDS |
| TGATCATCATAGTGACATAG+AGG | 0.592404 | 4.4:+52142213 | MS.gene070800:CDS |
| CTGGGAGACGGAGTTTGGTA+GGG | 0.598661 | 4.4:-52138367 | None:intergenic |
| TGGGACAATGGAAGTGCTTG+CGG | 0.601019 | 4.4:+52142163 | MS.gene070800:CDS |
| GAGGATAACTAGGGAAACTT+GGG | 0.601691 | 4.4:-52141187 | None:intergenic |
| TATCCGCCGCAAGAATCTCC+CGG | 0.602098 | 4.4:+52138487 | MS.gene070800:CDS |
| GCAGGCCAAGAAGCTGAGCA+AGG | 0.603755 | 4.4:+52140015 | MS.gene070800:CDS |
| AGACATATGAAGCACAAATG+AGG | 0.608018 | 4.4:-52142868 | None:intergenic |
| TTGAAAGATCATCCAAGTTG+GGG | 0.608431 | 4.4:-52142933 | None:intergenic |
| GAGTATCACCAACAGGTGGA+AGG | 0.610758 | 4.4:-52142960 | None:intergenic |
| CCATTGTCCCAAGAAGGGAA+TGG | 0.613885 | 4.4:-52142151 | None:intergenic |
| AAGTGCTTGCGGTGGCGATG+AGG | 0.614531 | 4.4:+52142174 | MS.gene070800:CDS |
| CATAATGTCAGACACTACAC+TGG | 0.616868 | 4.4:+52140319 | MS.gene070800:intron |
| TCTTTCTTTAGTGTCTTGGG+AGG | 0.617208 | 4.4:+52141947 | MS.gene070800:intron |
| ATTGGATGCGTGCAGCAACT+GGG | 0.617949 | 4.4:-52138385 | None:intergenic |
| GCTTAACAGATGCTTGAACA+TGG | 0.618407 | 4.4:-52142515 | None:intergenic |
| TCGGTGTATATGGTGGATGT+AGG | 0.619413 | 4.4:+52140718 | MS.gene070800:CDS |
| GCAGTTGTCTGGCGATAGAG+GGG | 0.622554 | 4.4:-52140651 | None:intergenic |
| GAGAAACCGGGAGATTCTTG+CGG | 0.629116 | 4.4:-52138493 | None:intergenic |
| CATTGGAACCTAAGATGAAG+GGG | 0.629724 | 4.4:-52138418 | None:intergenic |
| AGGCATATAAAGTCCTTGGT+GGG | 0.632793 | 4.4:+52139983 | MS.gene070800:CDS |
| ATCCATATCAGAGTCTGTGG+AGG | 0.634191 | 4.4:-52141351 | None:intergenic |
| GATGATTCCAGTGTTGACAA+AGG | 0.634680 | 4.4:-52140483 | None:intergenic |
| ATGAAATTTCTCCAACTCTG+AGG | 0.635773 | 4.4:+52140964 | MS.gene070800:CDS |
| ACTTCCTGGCCAGAATTCAG+CGG | 0.642146 | 4.4:+52141037 | MS.gene070800:CDS |
| CCAGGAAGTTGAAAACCAGT+AGG | 0.642526 | 4.4:-52141023 | None:intergenic |
| TCCATATCAGAGTCTGTGGA+GGG | 0.645582 | 4.4:-52141350 | None:intergenic |
| TCAATAAAACCTACCTGACG+TGG | 0.647033 | 4.4:-52142259 | None:intergenic |
| GACAAACCTGAGGATAACTA+GGG | 0.648663 | 4.4:-52141196 | None:intergenic |
| AATGTCAGACACTACACTGG+AGG | 0.649854 | 4.4:+52140322 | MS.gene070800:intron |
| TTGCAACACAAAACTTCCAG+AGG | 0.652553 | 4.4:+52141750 | MS.gene070800:CDS |
| GATGAGGCTGGTGATTATGA+AGG | 0.653118 | 4.4:+52142190 | MS.gene070800:CDS |
| ATGTCAGACACTACACTGGA+GGG | 0.658980 | 4.4:+52140323 | MS.gene070800:intron |
| AATAATCTCGGTGTATATGG+TGG | 0.660208 | 4.4:+52140711 | MS.gene070800:CDS |
| AAACCGGGAGATTCTTGCGG+CGG | 0.663125 | 4.4:-52138490 | None:intergenic |
| ACTGCGAAATTTGACGAAGG+AGG | 0.665207 | 4.4:+52140669 | MS.gene070800:CDS |
| TAATGAGTATCACCAACAGG+TGG | 0.666458 | 4.4:-52142964 | None:intergenic |
| AATGTCACTGATGTTTGCAG+CGG | 0.674186 | 4.4:-52142842 | None:intergenic |
| GACGGAGAAGAATATGACAA+TGG | 0.675138 | 4.4:+52141098 | MS.gene070800:CDS |
| CTGCTCTATTCATCCCACCA+AGG | 0.688474 | 4.4:-52139996 | None:intergenic |
| GACAATGGAAGTGCTTGCGG+TGG | 0.689721 | 4.4:+52142166 | MS.gene070800:CDS |
| ACAACTGCGAAATTTGACGA+AGG | 0.719142 | 4.4:+52140666 | MS.gene070800:CDS |
| GGACTGCCACTACCAGCCAG+AGG | 0.722451 | 4.4:+52141771 | MS.gene070800:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTCATTAAAATTTTATTT+TGG | + | chr4.4:52139892-52139911 | MS.gene070800:intron | 10.0% |
| !! | ACAAGAATACAAAAATTAAA+GGG | - | chr4.4:52139613-52139632 | None:intergenic | 15.0% |
| !! | GAAATTAAATACTAGATTAT+GGG | + | chr4.4:52138937-52138956 | MS.gene070800:intron | 15.0% |
| !! | TACAAGAATACAAAAATTAA+AGG | - | chr4.4:52139614-52139633 | None:intergenic | 15.0% |
| !!! | AGTAAAATTCTAAATTTTGT+AGG | + | chr4.4:52141313-52141332 | MS.gene070800:intron | 15.0% |
| !!! | ATTAGTCTACATTTTTAAAA+AGG | - | chr4.4:52142011-52142030 | None:intergenic | 15.0% |
| !! | AAATCAATCAGAAAAATACT+TGG | + | chr4.4:52138691-52138710 | MS.gene070800:CDS | 20.0% |
| !! | AACATTAAAATCTCTTTATC+TGG | - | chr4.4:52141497-52141516 | None:intergenic | 20.0% |
| !! | AATCAATCAGAAAAATACTT+GGG | + | chr4.4:52138692-52138711 | MS.gene070800:CDS | 20.0% |
| !! | AGTATCTTTCAAGAATTTAT+TGG | + | chr4.4:52142795-52142814 | MS.gene070800:CDS | 20.0% |
| !! | ATTATTCATTAAAAGACCTT+TGG | - | chr4.4:52140697-52140716 | None:intergenic | 20.0% |
| !! | GGAAATTAAATACTAGATTA+TGG | + | chr4.4:52138936-52138955 | MS.gene070800:intron | 20.0% |
| !! | TAATTCAAAACATAATGCAT+GGG | + | chr4.4:52141421-52141440 | MS.gene070800:CDS | 20.0% |
| !! | TATGAATGTACAAATTCAAA+CGG | + | chr4.4:52140223-52140242 | MS.gene070800:intron | 20.0% |
| !! | TCATCTTACTGATATTATTA+AGG | + | chr4.4:52138731-52138750 | MS.gene070800:CDS | 20.0% |
| !! | TCGATAACAATTTAAGAAAA+TGG | + | chr4.4:52139024-52139043 | MS.gene070800:intron | 20.0% |
| !! | TTAATTCAAAACATAATGCA+TGG | + | chr4.4:52141420-52141439 | MS.gene070800:CDS | 20.0% |
| !! | TTCATAAGATATCAAACATT+AGG | - | chr4.4:52140209-52140228 | None:intergenic | 20.0% |
| !!! | AAGTGTTTGGATTTTATATT+TGG | + | chr4.4:52138838-52138857 | MS.gene070800:intron | 20.0% |
| !!! | ATTAAAATTTTATTTTGGGC+AGG | + | chr4.4:52139897-52139916 | MS.gene070800:intron | 20.0% |
| !!! | TTTTATTATTTTCATCGAAC+TGG | - | chr4.4:52141001-52141020 | None:intergenic | 20.0% |
| ! | AACTGTAGCAAATTTCATTT+CGG | - | chr4.4:52142625-52142644 | None:intergenic | 25.0% |
| ! | AAGTATAAAAAATCCAAAGG+TGG | + | chr4.4:52141461-52141480 | MS.gene070800:intron | 25.0% |
| ! | AATTAGAACTTATCATTCAG+TGG | - | chr4.4:52142725-52142744 | None:intergenic | 25.0% |
| ! | ACAGATTTGAAAATGTTGAT+GGG | + | chr4.4:52141375-52141394 | MS.gene070800:CDS | 25.0% |
| ! | AGTATAAAAAATCCAAAGGT+GGG | + | chr4.4:52141462-52141481 | MS.gene070800:intron | 25.0% |
| ! | GAAAATAATAAAAGACCTAC+TGG | + | chr4.4:52141008-52141027 | MS.gene070800:CDS | 25.0% |
| ! | GTTATATACGTGTATACTTT+AGG | + | chr4.4:52139867-52139886 | MS.gene070800:intron | 25.0% |
| ! | TGAGTATTTATGTATCTTGT+TGG | + | chr4.4:52139638-52139657 | MS.gene070800:intron | 25.0% |
| ! | TGATCAAAAGAAAGTAGTTT+CGG | + | chr4.4:52141846-52141865 | MS.gene070800:intron | 25.0% |
| ! | TGTCAAAATTTATTCACTCA+GGG | + | chr4.4:52139942-52139961 | MS.gene070800:CDS | 25.0% |
| ! | TGTGAAATCTAAATCAACTT+CGG | - | chr4.4:52141647-52141666 | None:intergenic | 25.0% |
| ! | TTAACAAGATGATATTGATG+TGG | + | chr4.4:52139367-52139386 | MS.gene070800:intron | 25.0% |
| ! | TTAGATTGTATTTCAAGCTT+AGG | + | chr4.4:52142079-52142098 | MS.gene070800:intron | 25.0% |
| ! | TTCCAAATTTACTAGATTAG+AGG | + | chr4.4:52138915-52138934 | MS.gene070800:intron | 25.0% |
| ! | TTCCTCTAATCTAGTAAATT+TGG | - | chr4.4:52138920-52138939 | None:intergenic | 25.0% |
| ! | TTGAATGTAATTACATGTGT+AGG | + | chr4.4:52139053-52139072 | MS.gene070800:intron | 25.0% |
| ! | TTTAGATTTCACAAATTCTC+TGG | + | chr4.4:52141654-52141673 | MS.gene070800:CDS | 25.0% |
| !! | ACTTGTTAGAATATCAAAAG+AGG | - | chr4.4:52141275-52141294 | None:intergenic | 25.0% |
| !! | ATGCTGCTTATAACTAATAA+CGG | - | chr4.4:52140566-52140585 | None:intergenic | 25.0% |
| !! | CTAATAACGGAAATAGAATA+AGG | - | chr4.4:52140553-52140572 | None:intergenic | 25.0% |
| !! | GGTCTTTTAATGAATAATCT+CGG | + | chr4.4:52140699-52140718 | MS.gene070800:CDS | 25.0% |
| !! | TATTTGGGATTAACAACTTA+GGG | + | chr4.4:52139825-52139844 | MS.gene070800:intron | 25.0% |
| !! | TATTTTACTGACCTGTTATT+CGG | - | chr4.4:52142430-52142449 | None:intergenic | 25.0% |
| !! | TGGAAGTATAAAAAATCCAA+AGG | + | chr4.4:52141458-52141477 | MS.gene070800:CDS | 25.0% |
| !! | TTTCAAAGTACTTTCTTGTA+TGG | + | chr4.4:52141886-52141905 | MS.gene070800:intron | 25.0% |
| !! | TTTTATACTTCCAATGATCA+GGG | - | chr4.4:52141451-52141470 | None:intergenic | 25.0% |
| !! | TTTTTATACTTCCAATGATC+AGG | - | chr4.4:52141452-52141471 | None:intergenic | 25.0% |
| !!! | AAATGAAATTTGCTACAGTT+AGG | + | chr4.4:52142625-52142644 | MS.gene070800:intron | 25.0% |
| !!! | AATTTATTGGCTAATTTTCC+AGG | + | chr4.4:52142808-52142827 | MS.gene070800:CDS | 25.0% |
| !!! | AATTTTGTTTACATTTTCGC+TGG | - | chr4.4:52138597-52138616 | None:intergenic | 25.0% |
| !!! | ACTGTATTTTGTCATTTTGA+TGG | + | chr4.4:52139493-52139512 | MS.gene070800:intron | 25.0% |
| !!! | CGTTGTTTGTTTTAATTTCT+TGG | + | chr4.4:52138812-52138831 | MS.gene070800:intron | 25.0% |
| !!! | CTGTATTTTGTCATTTTGAT+GGG | + | chr4.4:52139494-52139513 | MS.gene070800:intron | 25.0% |
| !!! | CTTTTAGAACTTGATTTTGA+TGG | + | chr4.4:52139446-52139465 | MS.gene070800:intron | 25.0% |
| !!! | GCCATTTTCACAATTAAAAT+CGG | - | chr4.4:52141075-52141094 | None:intergenic | 25.0% |
| !!! | TATTTTAGTCTTCACAATAG+CGG | + | chr4.4:52139775-52139794 | MS.gene070800:intron | 25.0% |
| !!! | TTTTTTAGTCTTCACAATAG+CGG | + | chr4.4:52139681-52139700 | MS.gene070800:intron | 25.0% |
| AAAAAAACTACCTTCACATC+CGG | - | chr4.4:52141820-52141839 | None:intergenic | 30.0% | |
| AAAGAGAATCAGAATATGCT+AGG | - | chr4.4:52140066-52140085 | None:intergenic | 30.0% | |
| AACAGACATAGAGGTTTATA+TGG | - | chr4.4:52141231-52141250 | None:intergenic | 30.0% | |
| AAGTGCTAAAAGTTACTCTT+TGG | + | chr4.4:52142490-52142509 | MS.gene070800:CDS | 30.0% | |
| AATATGCTAGGCTTAATAAG+AGG | - | chr4.4:52140054-52140073 | None:intergenic | 30.0% | |
| AATGTTGAAAATGGACAAGA+AGG | + | chr4.4:52140350-52140369 | MS.gene070800:CDS | 30.0% | |
| AATTTCTTGGTTCAAGTGTT+TGG | + | chr4.4:52138825-52138844 | MS.gene070800:intron | 30.0% | |
| AGATAAAAAGGTCAATAGTC+TGG | + | chr4.4:52140388-52140407 | MS.gene070800:intron | 30.0% | |
| AGATTGCTATAGTGATATAG+TGG | - | chr4.4:52139276-52139295 | None:intergenic | 30.0% | |
| AGTGCTAAAAGTTACTCTTT+GGG | + | chr4.4:52142491-52142510 | MS.gene070800:CDS | 30.0% | |
| ATAAACCTCTATGTCTGTTT+AGG | + | chr4.4:52141232-52141251 | MS.gene070800:intron | 30.0% | |
| ATATGCTAGGCTTAATAAGA+GGG | - | chr4.4:52140053-52140072 | None:intergenic | 30.0% | |
| ATGTTCTTTCTTTAGTGTCT+TGG | + | chr4.4:52141943-52141962 | MS.gene070800:intron | 30.0% | |
| ATTGAAAGATCATCCAAGTT+GGG | - | chr4.4:52142937-52142956 | None:intergenic | 30.0% | |
| CTCAATGTAAAGAAGTTTGA+TGG | + | chr4.4:52140516-52140535 | MS.gene070800:CDS | 30.0% | |
| GACAGATTTGAAAATGTTGA+TGG | + | chr4.4:52141374-52141393 | MS.gene070800:CDS | 30.0% | |
| GTGTCAAAATTTATTCACTC+AGG | + | chr4.4:52139941-52139960 | MS.gene070800:CDS | 30.0% | |
| TATGTAACAAGAAGTTTCAC+CGG | - | chr4.4:52140859-52140878 | None:intergenic | 30.0% | |
| TATTGAAAGATCATCCAAGT+TGG | - | chr4.4:52142938-52142957 | None:intergenic | 30.0% | |
| TCCATTTCTTAAGAAATCCA+GGG | + | chr4.4:52142567-52142586 | MS.gene070800:intron | 30.0% | |
| TGCTCTTAATAAATTCCTCT+AGG | + | chr4.4:52142292-52142311 | MS.gene070800:intron | 30.0% | |
| TGTTCTTTCTTTAGTGTCTT+GGG | + | chr4.4:52141944-52141963 | MS.gene070800:intron | 30.0% | |
| TTGATATTCTAACAAGTGAG+TGG | + | chr4.4:52141278-52141297 | MS.gene070800:intron | 30.0% | |
| TTTCTTTGTAGATTGTGTTG+AGG | + | chr4.4:52140914-52140933 | MS.gene070800:intron | 30.0% | |
| ! | ACAATTTCAATCTGAAGTGT+AGG | + | chr4.4:52139095-52139114 | MS.gene070800:intron | 30.0% |
| ! | ATGAATAATCTCGGTGTATA+TGG | + | chr4.4:52140708-52140727 | MS.gene070800:CDS | 30.0% |
| ! | ATTTGGGATTAACAACTTAG+GGG | + | chr4.4:52139826-52139845 | MS.gene070800:intron | 30.0% |
| ! | CTATTTGGGATTAACAACTT+AGG | + | chr4.4:52139824-52139843 | MS.gene070800:intron | 30.0% |
| ! | CTGAAATATCAGGTTCATTT+TGG | - | chr4.4:52140788-52140807 | None:intergenic | 30.0% |
| ! | CTTAAGAAATGGAGGAATTT+TGG | - | chr4.4:52142560-52142579 | None:intergenic | 30.0% |
| ! | TACCTTCTGAAAATTAGTCT+CGG | - | chr4.4:52138775-52138794 | None:intergenic | 30.0% |
| ! | TACTGCAGTACATTTACTTT+TGG | + | chr4.4:52140251-52140270 | MS.gene070800:intron | 30.0% |
| ! | TCAATGGTATCTGAAATATC+AGG | - | chr4.4:52140798-52140817 | None:intergenic | 30.0% |
| !! | AGATTAGATGTTTGCTGTAT+AGG | + | chr4.4:52138875-52138894 | MS.gene070800:intron | 30.0% |
| !! | GAGTGAATAAATTTTGACAC+CGG | - | chr4.4:52139941-52139960 | None:intergenic | 30.0% |
| !!! | AGTAATGTTTTGGGATTCTT+CGG | - | chr4.4:52141709-52141728 | None:intergenic | 30.0% |
| !!! | GCCGATTTTAATTGTGAAAA+TGG | + | chr4.4:52141071-52141090 | MS.gene070800:CDS | 30.0% |
| !!! | TGGATTTTTTTGATCATGAC+TGG | + | chr4.4:52140408-52140427 | MS.gene070800:intron | 30.0% |
| !!! | TTTTTTAGTCTTCGCAATAG+CGG | + | chr4.4:52139727-52139746 | MS.gene070800:intron | 30.0% |
| AAAAATCCAAAGGTGGGATT+TGG | + | chr4.4:52141468-52141487 | MS.gene070800:intron | 35.0% | |
| AAACCGAAACACATTCAATG+TGG | + | chr4.4:52140882-52140901 | MS.gene070800:intron | 35.0% | |
| ACAAGATGATATTGATGTGG+TGG | + | chr4.4:52139370-52139389 | MS.gene070800:intron | 35.0% | |
| ACCCTGGATTTCTTAAGAAA+TGG | - | chr4.4:52142571-52142590 | None:intergenic | 35.0% | |
| AGACATATGAAGCACAAATG+AGG | - | chr4.4:52142871-52142890 | None:intergenic | 35.0% | |
| AGTTATAAGCAGCATGTTTG+AGG | + | chr4.4:52140571-52140590 | MS.gene070800:intron | 35.0% | |
| ATGAAATTTCTCCAACTCTG+AGG | + | chr4.4:52140964-52140983 | MS.gene070800:CDS | 35.0% | |
| CAAAATTTATTCACTCAGGG+TGG | + | chr4.4:52139945-52139964 | MS.gene070800:CDS | 35.0% | |
| CAGGAAAGAGACAGATAAAA+AGG | + | chr4.4:52140376-52140395 | MS.gene070800:CDS | 35.0% | |
| CTCCATTTCTTAAGAAATCC+AGG | + | chr4.4:52142566-52142585 | MS.gene070800:intron | 35.0% | |
| CTGGATTTCTTAAGAAATGG+AGG | - | chr4.4:52142568-52142587 | None:intergenic | 35.0% | |
| CTTCATATGTCTACTGCATT+TGG | + | chr4.4:52142879-52142898 | MS.gene070800:CDS | 35.0% | |
| GATCTCTATATGTACAAGCA+CGG | - | chr4.4:52142036-52142055 | None:intergenic | 35.0% | |
| TATGCTTGTTTCCGAATAAC+AGG | + | chr4.4:52142416-52142435 | MS.gene070800:intron | 35.0% | |
| TCACCACATTGAATGTGTTT+CGG | - | chr4.4:52140888-52140907 | None:intergenic | 35.0% | |
| TCAGTGTGTATAATACCTAG+AGG | - | chr4.4:52142310-52142329 | None:intergenic | 35.0% | |
| TCATTGGAACCTAAGATGAA+GGG | - | chr4.4:52138422-52138441 | None:intergenic | 35.0% | |
| TCTGGCAAAAGAAAGATCAA+TGG | - | chr4.4:52140814-52140833 | None:intergenic | 35.0% | |
| TGATCATCATAGTGACATAG+AGG | + | chr4.4:52142213-52142232 | MS.gene070800:CDS | 35.0% | |
| TTCAGTCAAAATATTGCAGC+AGG | + | chr4.4:52142375-52142394 | MS.gene070800:intron | 35.0% | |
| TTGAAAGATCATCCAAGTTG+GGG | - | chr4.4:52142936-52142955 | None:intergenic | 35.0% | |
| TTTACTATAGTCCTCAGAGT+TGG | - | chr4.4:52140978-52140997 | None:intergenic | 35.0% | |
| ! | AACACTGGAATCATCTTTTG+AGG | + | chr4.4:52140491-52140510 | MS.gene070800:CDS | 35.0% |
| ! | AATAATCTCGGTGTATATGG+TGG | + | chr4.4:52140711-52140730 | MS.gene070800:CDS | 35.0% |
| ! | AGGTGCTATATAGCTTACTA+GGG | + | chr4.4:52139115-52139134 | MS.gene070800:intron | 35.0% |
| ! | ATCTGCTGTTTGTTAAGACA+CGG | - | chr4.4:52138542-52138561 | None:intergenic | 35.0% |
| ! | ATTGATCTTTCTTTTGCCAG+AGG | + | chr4.4:52140813-52140832 | MS.gene070800:CDS | 35.0% |
| ! | CATCCCACTATAGCATTTTT+GGG | + | chr4.4:52139799-52139818 | MS.gene070800:intron | 35.0% |
| ! | TACCGAGACTAATTTTCAGA+AGG | + | chr4.4:52138770-52138789 | MS.gene070800:CDS | 35.0% |
| ! | TAGGTGCTATATAGCTTACT+AGG | + | chr4.4:52139114-52139133 | MS.gene070800:intron | 35.0% |
| ! | TCAGGGAGAAGTAATGTTTT+GGG | - | chr4.4:52141718-52141737 | None:intergenic | 35.0% |
| ! | TCATCCCACTATAGCATTTT+TGG | + | chr4.4:52139798-52139817 | MS.gene070800:intron | 35.0% |
| ! | TTACTTTGTTGTAGTCTCTG+AGG | + | chr4.4:52141558-52141577 | MS.gene070800:intron | 35.0% |
| ! | TTCAGGGAGAAGTAATGTTT+TGG | - | chr4.4:52141719-52141738 | None:intergenic | 35.0% |
| !! | GAATTTTGGTATACCTGAAC+AGG | - | chr4.4:52142546-52142565 | None:intergenic | 35.0% |
| !! | GAGGGTGTTAATGTTGAAAA+TGG | + | chr4.4:52140341-52140360 | MS.gene070800:CDS | 35.0% |
| !! | GTGTTGCTTTGTGAAATATC+CGG | + | chr4.4:52140837-52140856 | MS.gene070800:intron | 35.0% |
| !! | TCTGTTGACTCTATTCTACA+GGG | + | chr4.4:52142760-52142779 | MS.gene070800:intron | 35.0% |
| !! | TGTAATGCTCTAGAATCCTA+TGG | - | chr4.4:52142680-52142699 | None:intergenic | 35.0% |
| !! | TTCTGTTGACTCTATTCTAC+AGG | + | chr4.4:52142759-52142778 | MS.gene070800:intron | 35.0% |
| !!! | AGCATTTTTGGGTGCTATTT+GGG | + | chr4.4:52139810-52139829 | MS.gene070800:intron | 35.0% |
| !!! | GTGCTATTTTAACTCTCCAT+AGG | + | chr4.4:52142661-52142680 | MS.gene070800:intron | 35.0% |
| !!! | TAGCATTTTTGGGTGCTATT+TGG | + | chr4.4:52139809-52139828 | MS.gene070800:intron | 35.0% |
| !!! | TTTTTTGTAGCCGCAAATTG+CGG | + | chr4.4:52139238-52139257 | MS.gene070800:intron | 35.0% |
| AAAATGGACAAGAAGGAAGC+AGG | + | chr4.4:52140357-52140376 | MS.gene070800:CDS | 40.0% | |
| AAGTTTCCCTAGTTATCCTC+AGG | + | chr4.4:52141190-52141209 | MS.gene070800:CDS | 40.0% | |
| AATAGCTTGACAAGTTCCTC+TGG | - | chr4.4:52141790-52141809 | None:intergenic | 40.0% | |
| AATGTCACTGATGTTTGCAG+CGG | - | chr4.4:52142845-52142864 | None:intergenic | 40.0% | |
| ACAACTGCGAAATTTGACGA+AGG | + | chr4.4:52140666-52140685 | MS.gene070800:CDS | 40.0% | |
| AGCACCCAAAAATGCTATAG+TGG | - | chr4.4:52139806-52139825 | None:intergenic | 40.0% | |
| AGGCATATAAAGTCCTTGGT+GGG | + | chr4.4:52139983-52140002 | MS.gene070800:CDS | 40.0% | |
| CACTTGAACATCAACCTGTT+TGG | - | chr4.4:52142475-52142494 | None:intergenic | 40.0% | |
| CATAATGTCAGACACTACAC+TGG | + | chr4.4:52140319-52140338 | MS.gene070800:intron | 40.0% | |
| CATTGGAACCTAAGATGAAG+GGG | - | chr4.4:52138421-52138440 | None:intergenic | 40.0% | |
| CCTAATGGAGATTAGGAGTT+GGG | + | chr4.4:52139314-52139333 | MS.gene070800:intron | 40.0% | |
| CTAATGGAGATTAGGAGTTG+GGG | + | chr4.4:52139315-52139334 | MS.gene070800:intron | 40.0% | |
| CTCATCCTAAACAGACATAG+AGG | - | chr4.4:52141240-52141259 | None:intergenic | 40.0% | |
| CTGCATTTGGCAAATGAGAA+AGG | + | chr4.4:52142892-52142911 | MS.gene070800:CDS | 40.0% | |
| CTTTGTGGATGAGAGTTACA+GGG | + | chr4.4:52140132-52140151 | MS.gene070800:intron | 40.0% | |
| GAACTTATCATTCAGTGGCA+AGG | - | chr4.4:52142720-52142739 | None:intergenic | 40.0% | |
| GACAAACCTGAGGATAACTA+GGG | - | chr4.4:52141199-52141218 | None:intergenic | 40.0% | |
| GACGGAGAAGAATATGACAA+TGG | + | chr4.4:52141098-52141117 | MS.gene070800:CDS | 40.0% | |
| GAGGATAACTAGGGAAACTT+GGG | - | chr4.4:52141190-52141209 | None:intergenic | 40.0% | |
| GATTAACAACTTAGGGGTGA+AGG | + | chr4.4:52139832-52139851 | MS.gene070800:intron | 40.0% | |
| GCACCCAAAAATGCTATAGT+GGG | - | chr4.4:52139805-52139824 | None:intergenic | 40.0% | |
| GCTTAACAGATGCTTGAACA+TGG | - | chr4.4:52142518-52142537 | None:intergenic | 40.0% | |
| GGAACTTAGAAGTGAAGATG+AGG | + | chr4.4:52139391-52139410 | MS.gene070800:intron | 40.0% | |
| GGGTTCTTATTCTTGAGTCT+GGG | + | chr4.4:52141395-52141414 | MS.gene070800:CDS | 40.0% | |
| GTATGACAAAACGTCCAAAC+AGG | + | chr4.4:52142458-52142477 | MS.gene070800:CDS | 40.0% | |
| GTCATTGGAACCTAAGATGA+AGG | - | chr4.4:52138423-52138442 | None:intergenic | 40.0% | |
| GTTAAAACACGACAAACCTG+AGG | - | chr4.4:52141209-52141228 | None:intergenic | 40.0% | |
| GTTTCTCGATGATTGCTTTG+TGG | + | chr4.4:52140117-52140136 | MS.gene070800:intron | 40.0% | |
| TAATGAGTATCACCAACAGG+TGG | - | chr4.4:52142967-52142986 | None:intergenic | 40.0% | |
| TACAATTATCCTTCCCTCTC+TGG | + | chr4.4:52142590-52142609 | MS.gene070800:intron | 40.0% | |
| TCAAAACATAATGCATGGGC+AGG | + | chr4.4:52141425-52141444 | MS.gene070800:CDS | 40.0% | |
| TCAATAAAACCTACCTGACG+TGG | - | chr4.4:52142262-52142281 | None:intergenic | 40.0% | |
| TCTTTCTTTAGTGTCTTGGG+AGG | + | chr4.4:52141947-52141966 | MS.gene070800:intron | 40.0% | |
| TGAGGATAACTAGGGAAACT+TGG | - | chr4.4:52141191-52141210 | None:intergenic | 40.0% | |
| TGGGTTCTTATTCTTGAGTC+TGG | + | chr4.4:52141394-52141413 | MS.gene070800:CDS | 40.0% | |
| TTCAACCTACTTCCGAAGAT+GGG | + | chr4.4:52141581-52141600 | MS.gene070800:CDS | 40.0% | |
| TTGCAACACAAAACTTCCAG+AGG | + | chr4.4:52141750-52141769 | MS.gene070800:CDS | 40.0% | |
| ! | AATTGTGAAAATGGCGCTGA+CGG | + | chr4.4:52141080-52141099 | MS.gene070800:CDS | 40.0% |
| ! | CTGTTTGTTAAGACACGGAT+CGG | - | chr4.4:52138537-52138556 | None:intergenic | 40.0% |
| ! | GTTTGGACGTTTTGTCATAC+TGG | - | chr4.4:52142458-52142477 | None:intergenic | 40.0% |
| ! | TCTGAGGCATATAAAGTCCT+TGG | + | chr4.4:52139979-52139998 | MS.gene070800:CDS | 40.0% |
| ! | TGGCGAGCTTTATACAATTC+TGG | - | chr4.4:52138577-52138596 | None:intergenic | 40.0% |
| ! | TTATTCACTCAGGGTGGATT+CGG | + | chr4.4:52139951-52139970 | MS.gene070800:CDS | 40.0% |
| ! | TTCTTAGTCTTTGTCTGCCT+AGG | - | chr4.4:52141619-52141638 | None:intergenic | 40.0% |
| ! | TTTTGGTATACCTGAACAGG+AGG | - | chr4.4:52142543-52142562 | None:intergenic | 40.0% |
| !! | AGAAGTACCTGCAAAGTGTA+TGG | + | chr4.4:52140758-52140777 | MS.gene070800:CDS | 40.0% |
| !! | AGATGTTTGCTGTATAGGTC+AGG | + | chr4.4:52138880-52138899 | MS.gene070800:intron | 40.0% |
| !! | GATGATTCCAGTGTTGACAA+AGG | - | chr4.4:52140486-52140505 | None:intergenic | 40.0% |
| !! | TCTGGAAGTTTTGTGTTGCA+AGG | - | chr4.4:52141751-52141770 | None:intergenic | 40.0% |
| !! | TGTCAAGCTATTTCTGCTTC+CGG | + | chr4.4:52141798-52141817 | MS.gene070800:CDS | 40.0% |
| !!! | AATGTTTTGGGATTCTTCGG+AGG | - | chr4.4:52141706-52141725 | None:intergenic | 40.0% |
| AATCCAAAGGTGGGATTTGG+AGG | + | chr4.4:52141471-52141490 | MS.gene070800:intron | 45.0% | |
| AATGTCAGACACTACACTGG+AGG | + | chr4.4:52140322-52140341 | MS.gene070800:intron | 45.0% | |
| ACAAAAAACGCCACTGCTGA+AGG | - | chr4.4:52139226-52139245 | None:intergenic | 45.0% | |
| ACTGCGAAATTTGACGAAGG+AGG | + | chr4.4:52140669-52140688 | MS.gene070800:CDS | 45.0% | |
| AGAACGATCCATTCCCTTCT+TGG | + | chr4.4:52142143-52142162 | MS.gene070800:CDS | 45.0% | |
| AGCAAGATGTCCGCAATTTG+CGG | - | chr4.4:52139251-52139270 | None:intergenic | 45.0% | |
| AGCTGTGCCTAATGGAGATT+AGG | + | chr4.4:52139307-52139326 | MS.gene070800:intron | 45.0% | |
| AGGAGGGCAAAAAGATTCTC+AGG | + | chr4.4:52141967-52141986 | MS.gene070800:CDS | 45.0% | |
| AGGGAAGGATAATTGTACCC+TGG | - | chr4.4:52142587-52142606 | None:intergenic | 45.0% | |
| ATCCATATCAGAGTCTGTGG+AGG | - | chr4.4:52141354-52141373 | None:intergenic | 45.0% | |
| ATGTCAGACACTACACTGGA+GGG | + | chr4.4:52140323-52140342 | MS.gene070800:intron | 45.0% | |
| ATTTCTGCTTCCGGATGTGA+AGG | + | chr4.4:52141807-52141826 | MS.gene070800:CDS | 45.0% | |
| CAACCAGTCATTGCTGATCT+AGG | + | chr4.4:52141149-52141168 | MS.gene070800:CDS | 45.0% | |
| CACTTCCATTGTCCCAAGAA+GGG | - | chr4.4:52142159-52142178 | None:intergenic | 45.0% | |
| CATAGTGACATAGAGGATCC+AGG | + | chr4.4:52142220-52142239 | MS.gene070800:CDS | 45.0% | |
| CCAGGAAGTTGAAAACCAGT+AGG | - | chr4.4:52141026-52141045 | None:intergenic | 45.0% | |
| CCCAACTCCTAATCTCCATT+AGG | - | chr4.4:52139317-52139336 | None:intergenic | 45.0% | |
| CGACAAACCTGAGGATAACT+AGG | - | chr4.4:52141200-52141219 | None:intergenic | 45.0% | |
| CGTCAAATTTCGCAGTTGTC+TGG | - | chr4.4:52140665-52140684 | None:intergenic | 45.0% | |
| CTAACAAGTGAGTGGTTCAG+CGG | + | chr4.4:52141286-52141305 | MS.gene070800:intron | 45.0% | |
| CTAGATCAGCAATGACTGGT+TGG | - | chr4.4:52141151-52141170 | None:intergenic | 45.0% | |
| CTTTGTCTGCCTAGGTTTCA+GGG | - | chr4.4:52141611-52141630 | None:intergenic | 45.0% | |
| GAACGATCCATTCCCTTCTT+GGG | + | chr4.4:52142144-52142163 | MS.gene070800:CDS | 45.0% | |
| GAGGCATATAAAGTCCTTGG+TGG | + | chr4.4:52139982-52140001 | MS.gene070800:CDS | 45.0% | |
| GATGAGGCTGGTGATTATGA+AGG | + | chr4.4:52142190-52142209 | MS.gene070800:CDS | 45.0% | |
| GCCTAATGGAGATTAGGAGT+TGG | + | chr4.4:52139313-52139332 | MS.gene070800:intron | 45.0% | |
| GCTTTGTGGATGAGAGTTAC+AGG | + | chr4.4:52140131-52140150 | MS.gene070800:intron | 45.0% | |
| GTCATCCATATCAGAGTCTG+TGG | - | chr4.4:52141357-52141376 | None:intergenic | 45.0% | |
| GTTCAACCTACTTCCGAAGA+TGG | + | chr4.4:52141580-52141599 | MS.gene070800:CDS | 45.0% | |
| GTTGTCACCTTTGTCAACAC+TGG | + | chr4.4:52140476-52140495 | MS.gene070800:intron | 45.0% | |
| TATCCAAAGCTTCCCCAACT+TGG | + | chr4.4:52142921-52142940 | MS.gene070800:CDS | 45.0% | |
| TCAATATGCCTTCCACCTGT+TGG | + | chr4.4:52142952-52142971 | MS.gene070800:CDS | 45.0% | |
| TCCATATCAGAGTCTGTGGA+GGG | - | chr4.4:52141353-52141372 | None:intergenic | 45.0% | |
| TCTTATTACACAGCCACGTC+AGG | + | chr4.4:52142246-52142265 | MS.gene070800:CDS | 45.0% | |
| TCTTTAGTGTCTTGGGAGGA+GGG | + | chr4.4:52141951-52141970 | MS.gene070800:intron | 45.0% | |
| TCTTTGTCTGCCTAGGTTTC+AGG | - | chr4.4:52141612-52141631 | None:intergenic | 45.0% | |
| TGGCTTTCCATACACTTTGC+AGG | - | chr4.4:52140768-52140787 | None:intergenic | 45.0% | |
| TGTAACCTTGCTCAGCTTCT+TGG | - | chr4.4:52140023-52140042 | None:intergenic | 45.0% | |
| TGTCAGTAGCACTGCTATAG+CGG | + | chr4.4:52139149-52139168 | MS.gene070800:intron | 45.0% | |
| TGTTAAGCTTCCTCCTGTTC+AGG | + | chr4.4:52142530-52142549 | MS.gene070800:CDS | 45.0% | |
| TTCACAAAGCAACACACCTC+TGG | - | chr4.4:52140832-52140851 | None:intergenic | 45.0% | |
| TTCTTTAGTGTCTTGGGAGG+AGG | + | chr4.4:52141950-52141969 | MS.gene070800:intron | 45.0% | |
| TTTCAGGGTTGACCCATCTT+CGG | - | chr4.4:52141596-52141615 | None:intergenic | 45.0% | |
| ! | AGCAGTGCTACTGACAACAT+AGG | - | chr4.4:52139145-52139164 | None:intergenic | 45.0% |
| !! | GGAAGTTTTGTGTTGCAAGG+CGG | - | chr4.4:52141748-52141767 | None:intergenic | 45.0% |
| !! | TCGGTGTATATGGTGGATGT+AGG | + | chr4.4:52140718-52140737 | MS.gene070800:CDS | 45.0% |
| !!! | CCTACTGGTTTTCAACTTCC+TGG | + | chr4.4:52141023-52141042 | MS.gene070800:CDS | 45.0% |
| !!! | ATTATTTAATTTTTTGATTT+TGG | + | chr4.4:52138651-52138670 | MS.gene070800:intron | 5.0% |
| !!! | TTATTTAATTTTTTGATTTT+GGG | + | chr4.4:52138652-52138671 | MS.gene070800:intron | 5.0% |
| !!! | TTTCATTAAAATTTTATTTT+GGG | + | chr4.4:52139893-52139912 | MS.gene070800:intron | 5.0% |
| AATATGACAATGGCGCGACC+TGG | + | chr4.4:52141108-52141127 | MS.gene070800:CDS | 50.0% | |
| ACCGACAAGCTATGAAGCAC+TGG | + | chr4.4:52138972-52138991 | MS.gene070800:intron | 50.0% | |
| ACGGAGTTTGGTAGGGCTAA+GGG | - | chr4.4:52138363-52138382 | None:intergenic | 50.0% | |
| ACTTCCTGGCCAGAATTCAG+CGG | + | chr4.4:52141037-52141056 | MS.gene070800:CDS | 50.0% | |
| ATGGGTCAACCCTGAAACCT+AGG | + | chr4.4:52141599-52141618 | MS.gene070800:CDS | 50.0% | |
| ATTACACAGCCACGTCAGGT+AGG | + | chr4.4:52142250-52142269 | MS.gene070800:intron | 50.0% | |
| ATTGGATGCGTGCAGCAACT+GGG | - | chr4.4:52138388-52138407 | None:intergenic | 50.0% | |
| CAAGCTCTTCCGCTGAATTC+TGG | - | chr4.4:52141049-52141068 | None:intergenic | 50.0% | |
| CCATTAGGCACAGCTGTAGT+GGG | - | chr4.4:52139302-52139321 | None:intergenic | 50.0% | |
| CCATTCCCTTCTTGGGACAA+TGG | + | chr4.4:52142151-52142170 | MS.gene070800:CDS | 50.0% | |
| CCATTGTCCCAAGAAGGGAA+TGG | - | chr4.4:52142154-52142173 | None:intergenic | 50.0% | |
| CGTCGAGAGATTGAGAAACC+GGG | - | chr4.4:52138508-52138527 | None:intergenic | 50.0% | |
| CTGCTCTATTCATCCCACCA+AGG | - | chr4.4:52139999-52140018 | None:intergenic | 50.0% | |
| CTTGGTGGGATGAATAGAGC+AGG | + | chr4.4:52139997-52140016 | MS.gene070800:CDS | 50.0% | |
| GAGAAACCGGGAGATTCTTG+CGG | - | chr4.4:52138496-52138515 | None:intergenic | 50.0% | |
| GAGCCTAGATCAGCAATGAC+TGG | - | chr4.4:52141155-52141174 | None:intergenic | 50.0% | |
| GAGTATCACCAACAGGTGGA+AGG | - | chr4.4:52142963-52142982 | None:intergenic | 50.0% | |
| GCACTTCCATTGTCCCAAGA+AGG | - | chr4.4:52142160-52142179 | None:intergenic | 50.0% | |
| GCGTCGAGAGATTGAGAAAC+CGG | - | chr4.4:52138509-52138528 | None:intergenic | 50.0% | |
| GGAATAGCGTAGCAGTGGTA+GGG | + | chr4.4:52139170-52139189 | MS.gene070800:intron | 50.0% | |
| GGTGCATTTGCAGATGCAGA+TGG | + | chr4.4:52142100-52142119 | MS.gene070800:intron | 50.0% | |
| GTCATCATGATCGTCACTCC+AGG | - | chr4.4:52141129-52141148 | None:intergenic | 50.0% | |
| GTTAAGACACGGATCGGAGT+CGG | - | chr4.4:52138531-52138550 | None:intergenic | 50.0% | |
| GTTGACCCATCTTCGGAAGT+AGG | - | chr4.4:52141589-52141608 | None:intergenic | 50.0% | |
| TCAGAGAAACCAGAGAGGGA+AGG | - | chr4.4:52142602-52142621 | None:intergenic | 50.0% | |
| TCCATTAGGCACAGCTGTAG+TGG | - | chr4.4:52139303-52139322 | None:intergenic | 50.0% | |
| TCCCTCCACAGACTCTGATA+TGG | + | chr4.4:52141349-52141368 | MS.gene070800:CDS | 50.0% | |
| TCGGTCAGAGAAACCAGAGA+GGG | - | chr4.4:52142606-52142625 | None:intergenic | 50.0% | |
| TGGAGATTAGGAGTTGGGGA+TGG | + | chr4.4:52139319-52139338 | MS.gene070800:intron | 50.0% | |
| TTCGGTCAGAGAAACCAGAG+AGG | - | chr4.4:52142607-52142626 | None:intergenic | 50.0% | |
| TTTGACGAAGGAGGAGCCAA+AGG | + | chr4.4:52140678-52140697 | MS.gene070800:CDS | 50.0% | |
| ! | ATAGCGGAATAGCGTAGCAG+TGG | + | chr4.4:52139165-52139184 | MS.gene070800:intron | 50.0% |
| ! | CATCCAAGTTGGGGAAGCTT+TGG | - | chr4.4:52142927-52142946 | None:intergenic | 50.0% |
| ! | GCCAGTGCTTCATAGCTTGT+CGG | - | chr4.4:52138976-52138995 | None:intergenic | 50.0% |
| ! | GGTGGATTCGGTTCATTCTG+AGG | + | chr4.4:52139963-52139982 | MS.gene070800:CDS | 50.0% |
| !! | GGCTGTGTAATAAGAGTGCC+TGG | - | chr4.4:52142241-52142260 | None:intergenic | 50.0% |
| !! | TGGGACAATGGAAGTGCTTG+CGG | + | chr4.4:52142163-52142182 | MS.gene070800:CDS | 50.0% |
| AAACCGGGAGATTCTTGCGG+CGG | - | chr4.4:52138493-52138512 | None:intergenic | 55.0% | |
| ACCTAAGATGAAGGGGCTGG+TGG | - | chr4.4:52138414-52138433 | None:intergenic | 55.0% | |
| ACTGGGAGACGGAGTTTGGT+AGG | - | chr4.4:52138371-52138390 | None:intergenic | 55.0% | |
| AGCAACTGGGAGACGGAGTT+TGG | - | chr4.4:52138375-52138394 | None:intergenic | 55.0% | |
| AGCGTAGCAGTGGTAGGGTT+TGG | + | chr4.4:52139175-52139194 | MS.gene070800:intron | 55.0% | |
| ATTCTTGCGGCGGATAGCAG+CGG | - | chr4.4:52138483-52138502 | None:intergenic | 55.0% | |
| CAAGTTCCTCTGGCTGGTAG+TGG | - | chr4.4:52141780-52141799 | None:intergenic | 55.0% | |
| CCCACTACAGCTGTGCCTAA+TGG | + | chr4.4:52139299-52139318 | MS.gene070800:intron | 55.0% | |
| CGCAGTTGTCTGGCGATAGA+GGG | - | chr4.4:52140655-52140674 | None:intergenic | 55.0% | |
| CGGAATAGCGTAGCAGTGGT+AGG | + | chr4.4:52139169-52139188 | MS.gene070800:intron | 55.0% | |
| CTGGGAGACGGAGTTTGGTA+GGG | - | chr4.4:52138370-52138389 | None:intergenic | 55.0% | |
| GACGGAGTTTGGTAGGGCTA+AGG | - | chr4.4:52138364-52138383 | None:intergenic | 55.0% | |
| GATTGGATGCGTGCAGCAAC+TGG | - | chr4.4:52138389-52138408 | None:intergenic | 55.0% | |
| GCAGTTGTCTGGCGATAGAG+GGG | - | chr4.4:52140654-52140673 | None:intergenic | 55.0% | |
| GCTTGACAAGTTCCTCTGGC+TGG | - | chr4.4:52141786-52141805 | None:intergenic | 55.0% | |
| GGAACCTAAGATGAAGGGGC+TGG | - | chr4.4:52138417-52138436 | None:intergenic | 55.0% | |
| TATCCGCCGCAAGAATCTCC+CGG | + | chr4.4:52138487-52138506 | MS.gene070800:CDS | 55.0% | |
| TCGCAGTTGTCTGGCGATAG+AGG | - | chr4.4:52140656-52140675 | None:intergenic | 55.0% | |
| TCTTCCGCTGAATTCTGGCC+AGG | - | chr4.4:52141044-52141063 | None:intergenic | 55.0% | |
| TGCAAGGCGGTCTGCTTTCA+GGG | - | chr4.4:52141735-52141754 | None:intergenic | 55.0% | |
| TGGCCTCCAAATCCCACCTT+TGG | - | chr4.4:52141477-52141496 | None:intergenic | 55.0% | |
| TTGCAAGGCGGTCTGCTTTC+AGG | - | chr4.4:52141736-52141755 | None:intergenic | 55.0% | |
| ! | CCTAAGATGAAGGGGCTGGT+GGG | - | chr4.4:52138413-52138432 | None:intergenic | 55.0% |
| !! | GACAATGGAAGTGCTTGCGG+TGG | + | chr4.4:52142166-52142185 | MS.gene070800:CDS | 55.0% |
| AAGTGCTTGCGGTGGCGATG+AGG | + | chr4.4:52142174-52142193 | MS.gene070800:CDS | 60.0% | |
| ACTGCTGAAGGCAGCTCGCA+TGG | - | chr4.4:52139214-52139233 | None:intergenic | 60.0% | |
| ATGCGAGCTGCCTTCAGCAG+TGG | + | chr4.4:52139213-52139232 | MS.gene070800:intron | 60.0% | |
| CATGGGCAGGCCCTGATCAT+TGG | + | chr4.4:52141438-52141457 | MS.gene070800:CDS | 60.0% | |
| CCCACCAGCCCCTTCATCTT+AGG | + | chr4.4:52138410-52138429 | MS.gene070800:CDS | 60.0% | |
| GCAAGCTGCACTCTTGAGGC+CGG | + | chr4.4:52139919-52139938 | MS.gene070800:CDS | 60.0% | |
| GCAGCGGCATTGCATTCACC+TGG | - | chr4.4:52142829-52142848 | None:intergenic | 60.0% | |
| GCAGGCAAGCTGCACTCTTG+AGG | + | chr4.4:52139915-52139934 | MS.gene070800:intron | 60.0% | |
| GCAGGCCAAGAAGCTGAGCA+AGG | + | chr4.4:52140015-52140034 | MS.gene070800:CDS | 60.0% | |
| GCGTTCGAGCTGGTCGTCAT+TGG | - | chr4.4:52138438-52138457 | None:intergenic | 60.0% | |
| TCATGCTTCCGCGTCTGCGT+CGG | - | chr4.4:52139417-52139436 | None:intergenic | 60.0% | |
| TGCGTGCAGCAACTGGGAGA+CGG | - | chr4.4:52138382-52138401 | None:intergenic | 60.0% | |
| ! | TGAAGGGGCTGGTGGGAGAT+TGG | - | chr4.4:52138406-52138425 | None:intergenic | 60.0% |
| AGATGAGGCCGACGCAGACG+CGG | + | chr4.4:52139406-52139425 | MS.gene070800:intron | 65.0% | |
| GGACTGCCACTACCAGCCAG+AGG | + | chr4.4:52141771-52141790 | MS.gene070800:CDS | 65.0% | |
| GTGCTTGAGCGCGTTCGAGC+TGG | - | chr4.4:52138448-52138467 | None:intergenic | 65.0% | |
| !! | GGCTGGTAGTGGCAGTCCTC+TGG | - | chr4.4:52141769-52141788 | None:intergenic | 65.0% |
| GCTTGCGGTGGCGATGAGGC+TGG | + | chr4.4:52142178-52142197 | MS.gene070800:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 52138350 | 52142987 | 52138350 | ID=MS.gene070800 |
| chr4.4 | mRNA | 52138350 | 52142987 | 52138350 | ID=MS.gene070800.t1;Parent=MS.gene070800 |
| chr4.4 | exon | 52138350 | 52138508 | 52138350 | ID=MS.gene070800.t1.exon1;Parent=MS.gene070800.t1 |
| chr4.4 | CDS | 52138350 | 52138508 | 52138350 | ID=cds.MS.gene070800.t1;Parent=MS.gene070800.t1 |
| chr4.4 | exon | 52138690 | 52138791 | 52138690 | ID=MS.gene070800.t1.exon2;Parent=MS.gene070800.t1 |
| chr4.4 | CDS | 52138690 | 52138791 | 52138690 | ID=cds.MS.gene070800.t1;Parent=MS.gene070800.t1 |
| chr4.4 | exon | 52139919 | 52140036 | 52139919 | ID=MS.gene070800.t1.exon3;Parent=MS.gene070800.t1 |
| chr4.4 | CDS | 52139919 | 52140036 | 52139919 | ID=cds.MS.gene070800.t1;Parent=MS.gene070800.t1 |
| chr4.4 | exon | 52140330 | 52140397 | 52140330 | ID=MS.gene070800.t1.exon4;Parent=MS.gene070800.t1 |
| chr4.4 | CDS | 52140330 | 52140397 | 52140330 | ID=cds.MS.gene070800.t1;Parent=MS.gene070800.t1 |
| chr4.4 | exon | 52140477 | 52140537 | 52140477 | ID=MS.gene070800.t1.exon5;Parent=MS.gene070800.t1 |
| chr4.4 | CDS | 52140477 | 52140537 | 52140477 | ID=cds.MS.gene070800.t1;Parent=MS.gene070800.t1 |
| chr4.4 | exon | 52140634 | 52140834 | 52140634 | ID=MS.gene070800.t1.exon6;Parent=MS.gene070800.t1 |
| chr4.4 | CDS | 52140634 | 52140834 | 52140634 | ID=cds.MS.gene070800.t1;Parent=MS.gene070800.t1 |
| chr4.4 | exon | 52140925 | 52141211 | 52140925 | ID=MS.gene070800.t1.exon7;Parent=MS.gene070800.t1 |
| chr4.4 | CDS | 52140925 | 52141211 | 52140925 | ID=cds.MS.gene070800.t1;Parent=MS.gene070800.t1 |
| chr4.4 | exon | 52141335 | 52141479 | 52141335 | ID=MS.gene070800.t1.exon8;Parent=MS.gene070800.t1 |
| chr4.4 | CDS | 52141335 | 52141479 | 52141335 | ID=cds.MS.gene070800.t1;Parent=MS.gene070800.t1 |
| chr4.4 | exon | 52141572 | 52141828 | 52141572 | ID=MS.gene070800.t1.exon9;Parent=MS.gene070800.t1 |
| chr4.4 | CDS | 52141572 | 52141828 | 52141572 | ID=cds.MS.gene070800.t1;Parent=MS.gene070800.t1 |
| chr4.4 | exon | 52141958 | 52141988 | 52141958 | ID=MS.gene070800.t1.exon10;Parent=MS.gene070800.t1 |
| chr4.4 | CDS | 52141958 | 52141988 | 52141958 | ID=cds.MS.gene070800.t1;Parent=MS.gene070800.t1 |
| chr4.4 | exon | 52142113 | 52142267 | 52142113 | ID=MS.gene070800.t1.exon11;Parent=MS.gene070800.t1 |
| chr4.4 | CDS | 52142113 | 52142267 | 52142113 | ID=cds.MS.gene070800.t1;Parent=MS.gene070800.t1 |
| chr4.4 | exon | 52142438 | 52142551 | 52142438 | ID=MS.gene070800.t1.exon12;Parent=MS.gene070800.t1 |
| chr4.4 | CDS | 52142438 | 52142551 | 52142438 | ID=cds.MS.gene070800.t1;Parent=MS.gene070800.t1 |
| chr4.4 | exon | 52142781 | 52142987 | 52142781 | ID=MS.gene070800.t1.exon13;Parent=MS.gene070800.t1 |
| chr4.4 | CDS | 52142781 | 52142987 | 52142781 | ID=cds.MS.gene070800.t1;Parent=MS.gene070800.t1 |
| Gene Sequence |
| Protein sequence |
