AlfalfaGEDB | MS.gene26109

M. sativa cultivar XinJiangDaYe / MS.gene26109

KEGG: -
GO: GO:0000785 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0110165 GO:1901363 GO:1903506 GO:2000112 GO:2001141
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene26109.t1	ACJ83992.1	53.1	98	1	1	1	53	1	98	5.80E-15	90.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene26109.t1	Q00423	44.8	96	10	1	1	53	1	96	3.0e-12	73.2

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene26109.t1	B7FGW3	53.1	98	1	1	1	53	1	98	4.2e-15	90.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049250	MS.gene26109	0.809763	1.61E-50	-1.69E-46
MS.gene049251	MS.gene26109	0.814569	1.44E-51	-1.69E-46
MS.gene049989	MS.gene26109	0.808947	2.41E-50	-1.69E-46
MS.gene050875	MS.gene26109	0.801293	9.64E-49	-1.69E-46
MS.gene051914	MS.gene26109	0.82897	6.69E-55	-1.69E-46
MS.gene051955	MS.gene26109	0.80777	4.30E-50	-1.69E-46
MS.gene052143	MS.gene26109	0.807508	4.88E-50	-1.69E-46
MS.gene052308	MS.gene26109	0.857926	1.17E-62	-1.69E-46
MS.gene052367	MS.gene26109	0.844795	6.06E-59	-1.69E-46
MS.gene053173	MS.gene26109	0.862216	5.93E-64	-1.69E-46
MS.gene053348	MS.gene26109	0.859156	5.03E-63	-1.69E-46
MS.gene053416	MS.gene26109	0.820674	6.05E-53	-1.69E-46
MS.gene053417	MS.gene26109	0.816031	6.82E-52	-1.69E-46
MS.gene054551	MS.gene26109	0.878368	2.97E-69	-1.69E-46
MS.gene054593	MS.gene26109	0.874772	5.20E-68	-1.69E-46
MS.gene054633	MS.gene26109	0.847806	9.16E-60	-1.69E-46
MS.gene054662	MS.gene26109	0.808376	3.19E-50	-1.69E-46
MS.gene054941	MS.gene26109	0.811119	8.21E-51	-1.69E-46
MS.gene055308	MS.gene26109	0.860112	2.59E-63	-1.69E-46
MS.gene055382	MS.gene26109	0.802656	5.06E-49	-1.69E-46
MS.gene055578	MS.gene26109	0.846716	1.82E-59	-1.69E-46
MS.gene055579	MS.gene26109	0.80132	9.52E-49	-1.69E-46
MS.gene055957	MS.gene26109	0.836493	9.06E-57	-1.69E-46
MS.gene056041	MS.gene26109	0.859587	3.73E-63	-1.69E-46
MS.gene05640	MS.gene26109	0.884071	2.62E-71	-1.69E-46
MS.gene056526	MS.gene26109	0.835727	1.42E-56	-1.69E-46
MS.gene056528	MS.gene26109	0.841941	3.50E-58	-1.69E-46
MS.gene05652	MS.gene26109	0.855344	6.72E-62	-1.69E-46
MS.gene056618	MS.gene26109	0.814548	1.46E-51	-1.69E-46
MS.gene057367	MS.gene26109	0.839882	1.21E-57	-1.69E-46
MS.gene057458	MS.gene26109	0.81453	1.47E-51	-1.69E-46
MS.gene058128	MS.gene26109	0.880958	3.57E-70	-1.69E-46
MS.gene058827	MS.gene26109	0.815283	1.00E-51	-1.69E-46
MS.gene058853	MS.gene26109	0.881154	3.04E-70	-1.69E-46
MS.gene05926	MS.gene26109	0.803822	2.90E-49	-1.69E-46
MS.gene059304	MS.gene26109	0.801503	8.73E-49	-1.69E-46
MS.gene059553	MS.gene26109	0.844726	6.32E-59	-1.69E-46
MS.gene059616	MS.gene26109	0.839224	1.80E-57	-1.69E-46
MS.gene060473	MS.gene26109	0.83796	3.82E-57	-1.69E-46
MS.gene060565	MS.gene26109	0.829473	5.05E-55	-1.69E-46
MS.gene06093	MS.gene26109	0.850842	1.31E-60	-1.69E-46
MS.gene061099	MS.gene26109	0.871292	7.64E-67	-1.69E-46
MS.gene061260	MS.gene26109	0.831982	1.23E-55	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene26109.t1	MTR_5g078330	73.659	205	8	2	1	160	1	204	1.81e-69	209
MS.gene26109.t1	MTR_3g065570	47.059	136	45	4	18	150	64	175	7.11e-17	73.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene26109.t1	AT1G14900	41.611	149	54	4	17	154	73	199	4.59e-17	75.1

Find 68 sgRNAs with CRISPR-Local

Find 102 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGGGTCTTGGGAGGTGCATT+AGG	0.195810	5.4:+56762836	None:intergenic
TCAGTCCTTTGAACCTTCTT+TGG	0.198015	5.4:+56762779	None:intergenic
CCTCTCTTTGGTGGTGCATT+TGG	0.255109	5.4:+56762953	None:intergenic
CTTCCACTTGAAGCAGCCTT+AGG	0.283817	5.4:+56762815	None:intergenic
GGTCTTCCACGTCCTCTCTT+TGG	0.323730	5.4:+56762941	None:intergenic
CTTAACCAGATGAAGGAAAA+TGG	0.327311	5.4:-56763016	MS.gene26109:intron
TTTGGTGGTGCATTTGGATC+AGG	0.346536	5.4:+56762959	None:intergenic
GCCAATGGATCCTTTGGCTT+TGG	0.350044	5.4:+56762917	None:intergenic
GGGTCTTGGGAGGTGCATTA+GGG	0.356682	5.4:+56762837	None:intergenic
TGAAGCAGCCTTAGGGGTCT+TGG	0.357314	5.4:+56762823	None:intergenic
AATGGATCCTTTGGCTTTGG+TGG	0.367305	5.4:+56762920	None:intergenic
TTCCACTTGAAGCAGCCTTA+GGG	0.394198	5.4:+56762816	None:intergenic
GGAGGTGCATTAGGGTCCTT+AGG	0.395197	5.4:+56762845	None:intergenic
GACGACCTCTTGGCCTTGGT+GGG	0.404356	5.4:+56762870	None:intergenic
GGTGGAGCCAATGGATCCTT+TGG	0.422272	5.4:+56762911	None:intergenic
GGAGGACGACCTCTTGGCCT+TGG	0.423053	5.4:+56762866	None:intergenic
CTTCCCCTTCCACTAGTAGT+TGG	0.429832	5.4:+56762653	None:intergenic
GGACGACCTCTTGGCCTTGG+TGG	0.430385	5.4:+56762869	None:intergenic
GAAGCAGCCTTAGGGGTCTT+GGG	0.435245	5.4:+56762824	None:intergenic
GACAGAACAGCAGCTGGTGG+TGG	0.460682	5.4:+56762893	None:intergenic
ACTACTAGTGGAAGGGGAAG+GGG	0.460928	5.4:-56762650	MS.gene26109:CDS
TCCTTAGGAGGACGACCTCT+TGG	0.478277	5.4:+56762860	None:intergenic
GTCATCTGAGGCTTAACCTT+AGG	0.479453	5.4:+56762620	None:intergenic
AACTACTAGTGGAAGGGGAA+GGG	0.479852	5.4:-56762651	MS.gene26109:CDS
TGTGAATTTACCTCAGGGTA+TGG	0.486285	5.4:+56763535	None:intergenic
CTTCCACGTCCTCTCTTTGG+TGG	0.517078	5.4:+56762944	None:intergenic
GCAGCTGGTGGTGGAGCCAA+TGG	0.520984	5.4:+56762902	None:intergenic
GGGAAGGGGTAGGCCTCCTA+AGG	0.528357	5.4:-56762636	MS.gene26109:CDS
AAGGCTGCTTCAAGTGGAAG+AGG	0.531029	5.4:-56762812	MS.gene26109:CDS
ACCCCTAAGGCTGCTTCAAG+TGG	0.532524	5.4:-56762818	MS.gene26109:CDS
GCCAAGAGGTCGTCCTCCTA+AGG	0.534326	5.4:-56762861	MS.gene26109:CDS
TCCACTTGAAGCAGCCTTAG+GGG	0.536454	5.4:+56762817	None:intergenic
ATCTGAGGCTTAACCTTAGG+AGG	0.537376	5.4:+56762623	None:intergenic
ACCAAAGCCAAAGGATCCAT+TGG	0.542885	5.4:-56762918	MS.gene26109:CDS
GCTTCAAGTGGAAGAGGAAG+GGG	0.550156	5.4:-56762806	MS.gene26109:CDS
GGTGGGGACAGAACAGCAGC+TGG	0.550403	5.4:+56762887	None:intergenic
TGCTTCAAGTGGAAGAGGAA+GGG	0.550902	5.4:-56762807	MS.gene26109:CDS
AGGAAGGGGTAGGCCAAAGA+AGG	0.551487	5.4:-56762792	MS.gene26109:CDS
ACAGCAACAGCAGCAACACT+TGG	0.556119	5.4:+56762677	None:intergenic
CAACTACTAGTGGAAGGGGA+AGG	0.556781	5.4:-56762652	MS.gene26109:CDS
GGGTATGGAGGAAGTGAAAG+AGG	0.561822	5.4:+56763550	None:intergenic
CTGCTTCAAGTGGAAGAGGA+AGG	0.565034	5.4:-56762808	MS.gene26109:CDS
AGCTTCAATGGCTACTCAAG+AGG	0.565718	5.4:-56763581	None:intergenic
TGCACCTCCCAAGACCCCTA+AGG	0.569439	5.4:-56762831	MS.gene26109:CDS
GCACCACCATCTCCACCACT+TGG	0.570283	5.4:+56762743	None:intergenic
CTGTTCCAACTACTAGTGGA+AGG	0.576494	5.4:-56762658	MS.gene26109:CDS
CTGCTGTTCTGTCCCCACCA+AGG	0.579342	5.4:-56762883	MS.gene26109:CDS
GTTCCAACTACTAGTGGAAG+GGG	0.585748	5.4:-56762656	MS.gene26109:CDS
TCAAATCCAAGTGGTGGAGA+TGG	0.596389	5.4:-56762749	MS.gene26109:CDS
GTTGCTGTTCCAACTACTAG+TGG	0.598369	5.4:-56762662	MS.gene26109:CDS
ACGACCTCTTGGCCTTGGTG+GGG	0.598499	5.4:+56762871	None:intergenic
GCACCACCAAAGAGAGGACG+TGG	0.602504	5.4:-56762947	MS.gene26109:CDS
AATGTTTCAAATCCAAGTGG+TGG	0.604254	5.4:-56762755	MS.gene26109:CDS
GGGGACAGAACAGCAGCTGG+TGG	0.609403	5.4:+56762890	None:intergenic
TGTTCCAACTACTAGTGGAA+GGG	0.611701	5.4:-56762657	MS.gene26109:CDS
GTAGGCCAAAGAAGGTTCAA+AGG	0.622028	5.4:-56762784	MS.gene26109:CDS
ACACTCACTTCAGTCATCTG+AGG	0.623459	5.4:+56762608	None:intergenic
GGTGCATTAGGGTCCTTAGG+AGG	0.623591	5.4:+56762848	None:intergenic
TGGAAGACCACCAAAGCCAA+AGG	0.624315	5.4:-56762927	MS.gene26109:CDS
GCAGCCTTAGGGGTCTTGGG+AGG	0.627198	5.4:+56762827	None:intergenic
GAATTTACCTCAGGGTATGG+AGG	0.638966	5.4:+56763538	None:intergenic
CCAAATGCACCACCAAAGAG+AGG	0.648545	5.4:-56762953	MS.gene26109:CDS
CTAGTGGAAGGGGAAGGGGT+AGG	0.654025	5.4:-56762646	MS.gene26109:CDS
AATCCAAGTGGTGGAGATGG+TGG	0.656042	5.4:-56762746	MS.gene26109:CDS
CTGTCCCCACCAAGGCCAAG+AGG	0.676490	5.4:-56762875	MS.gene26109:CDS
TTCACTTCCTCCATACCCTG+AGG	0.676529	5.4:-56763545	MS.gene26109:intron
GAGAATGTTTCAAATCCAAG+TGG	0.689463	5.4:-56762758	MS.gene26109:CDS
CAAGTGGAAGAGGAAGGGGT+AGG	0.697070	5.4:-56762802	MS.gene26109:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AAATAAGGAAATTTTTTTTA+GGG	-	chr5.4:56762824-56762843	MS.gene26109:CDS	10.0%
!!	TTCTTGAAAAAATAAGAAAA+GGG	+	chr5.4:56762683-56762702	None:intergenic	15.0%
!!	TTTCTTGAAAAAATAAGAAA+AGG	+	chr5.4:56762684-56762703	None:intergenic	15.0%
!!!	CAAATAAGGAAATTTTTTTT+AGG	-	chr5.4:56762823-56762842	MS.gene26109:CDS	15.0%
!!	AAAATCATTCAACATGTTAA+TGG	+	chr5.4:56762936-56762955	None:intergenic	20.0%
!!	AAATCATTCAACATGTTAAT+GGG	+	chr5.4:56762935-56762954	None:intergenic	20.0%
!!	TCTTGAAAAAATAAGAAAAG+GGG	+	chr5.4:56762682-56762701	None:intergenic	20.0%
!!!	TTAACAATTTTTACTCACTT+GGG	-	chr5.4:56762753-56762772	MS.gene26109:CDS	20.0%
!!!	TTTAACAATTTTTACTCACT+TGG	-	chr5.4:56762752-56762771	MS.gene26109:CDS	20.0%
!	AACTACATAGAATCAATCTA+TGG	-	chr5.4:56763093-56763112	MS.gene26109:intron	25.0%
!	TCAAGATTACTATTTGGTTA+GGG	+	chr5.4:56762789-56762808	None:intergenic	25.0%
!!	GATTTTGTAGATGATTATGA+AGG	-	chr5.4:56763020-56763039	MS.gene26109:intron	25.0%
!!!	GCTGTTTTTGTAATCAAATA+AGG	-	chr5.4:56762809-56762828	MS.gene26109:CDS	25.0%
!!!	TACAAAGACTTTTTTCTGTT+TGG	+	chr5.4:56762866-56762885	None:intergenic	25.0%
	AACAGCTCAAGATTACTATT+TGG	+	chr5.4:56762795-56762814	None:intergenic	30.0%
	AGTTGTTCTTTGCAAAAACA+AGG	+	chr5.4:56763185-56763204	None:intergenic	30.0%
	CAAGATTACTATTTGGTTAG+GGG	+	chr5.4:56762788-56762807	None:intergenic	30.0%
	CTCAAGATTACTATTTGGTT+AGG	+	chr5.4:56762790-56762809	None:intergenic	30.0%
	GATTTGCAAGAACAATTGAA+TGG	+	chr5.4:56763134-56763153	None:intergenic	30.0%
!	GTTGAATGATTTTCTCAACA+TGG	-	chr5.4:56762943-56762962	MS.gene26109:CDS	30.0%
!!	GATGATTTGTTTGAACCATT+TGG	+	chr5.4:56763066-56763085	None:intergenic	30.0%
	AAATCACCTTAACCAGATGA+AGG	-	chr5.4:56763149-56763168	MS.gene26109:intron	35.0%
	AATGTTTCAAATCCAAGTGG+TGG	-	chr5.4:56763417-56763436	MS.gene26109:intron	35.0%
	ATCTATGGTGAATTACCAGA+AGG	-	chr5.4:56763108-56763127	MS.gene26109:intron	35.0%
	CTTAACCAGATGAAGGAAAA+TGG	-	chr5.4:56763156-56763175	MS.gene26109:intron	35.0%
	GAGAATGTTTCAAATCCAAG+TGG	-	chr5.4:56763414-56763433	MS.gene26109:intron	35.0%
!	AAAGGGGTGTATGTTGAATT+AGG	+	chr5.4:56762666-56762685	None:intergenic	35.0%
!	AAGGGGTGTATGTTGAATTA+GGG	+	chr5.4:56762665-56762684	None:intergenic	35.0%
!	CATTTTCCTTCATCTGGTTA+AGG	+	chr5.4:56763158-56763177	None:intergenic	35.0%
	AGAACAATTGAATGGCCTTC+TGG	+	chr5.4:56763126-56763145	None:intergenic	40.0%
	TCAGTCCTTTGAACCTTCTT+TGG	+	chr5.4:56763396-56763415	None:intergenic	40.0%
	TGTGAATTTACCTCAGGGTA+TGG	+	chr5.4:56762640-56762659	None:intergenic	40.0%
	TGTTCCAACTACTAGTGGAA+GGG	-	chr5.4:56763515-56763534	MS.gene26109:intron	40.0%
!	AGGGGTGTATGTTGAATTAG+GGG	+	chr5.4:56762664-56762683	None:intergenic	40.0%
!	GTAGATGATTATGAAGGCAC+TGG	-	chr5.4:56763026-56763045	MS.gene26109:intron	40.0%
!!	GAAGCACTGAATGAACCAAA+TGG	-	chr5.4:56763048-56763067	MS.gene26109:intron	40.0%
	AACTACTAGTGGAAGGGGAA+GGG	-	chr5.4:56763521-56763540	MS.gene26109:intron	45.0%
	ACACTCACTTCAGTCATCTG+AGG	+	chr5.4:56763567-56763586	None:intergenic	45.0%
	ACCAAAGCCAAAGGATCCAT+TGG	-	chr5.4:56763254-56763273	MS.gene26109:intron	45.0%
	CTGTTCCAACTACTAGTGGA+AGG	-	chr5.4:56763514-56763533	MS.gene26109:intron	45.0%
	GAATTTACCTCAGGGTATGG+AGG	+	chr5.4:56762637-56762656	None:intergenic	45.0%
	GGGGTGTATGTTGAATTAGG+GGG	+	chr5.4:56762663-56762682	None:intergenic	45.0%
	GTAGGCCAAAGAAGGTTCAA+AGG	-	chr5.4:56763388-56763407	MS.gene26109:intron	45.0%
	GTTCCAACTACTAGTGGAAG+GGG	-	chr5.4:56763516-56763535	MS.gene26109:intron	45.0%
	TGCTTCAAGTGGAAGAGGAA+GGG	-	chr5.4:56763365-56763384	MS.gene26109:intron	45.0%
	TTCCACTTGAAGCAGCCTTA+GGG	+	chr5.4:56763359-56763378	None:intergenic	45.0%
!	ATCTGAGGCTTAACCTTAGG+AGG	+	chr5.4:56763552-56763571	None:intergenic	45.0%
!	GGTCACCATTTTCCTTCATC+TGG	+	chr5.4:56763164-56763183	None:intergenic	45.0%
!	GTCATCTGAGGCTTAACCTT+AGG	+	chr5.4:56763555-56763574	None:intergenic	45.0%
!	GTTGCTGTTCCAACTACTAG+TGG	-	chr5.4:56763510-56763529	MS.gene26109:intron	45.0%
!	TCAAATCCAAGTGGTGGAGA+TGG	-	chr5.4:56763423-56763442	MS.gene26109:intron	45.0%
!!	AATGGATCCTTTGGCTTTGG+TGG	+	chr5.4:56763255-56763274	None:intergenic	45.0%
!!	TTTGGTGGTGCATTTGGATC+AGG	+	chr5.4:56763216-56763235	None:intergenic	45.0%
	AAGGCTGCTTCAAGTGGAAG+AGG	-	chr5.4:56763360-56763379	MS.gene26109:intron	50.0%
	ACAGCAACAGCAGCAACACT+TGG	+	chr5.4:56763498-56763517	None:intergenic	50.0%
	ACTACTAGTGGAAGGGGAAG+GGG	-	chr5.4:56763522-56763541	MS.gene26109:intron	50.0%
	CAACTACTAGTGGAAGGGGA+AGG	-	chr5.4:56763520-56763539	MS.gene26109:intron	50.0%
	CCAAATGCACCACCAAAGAG+AGG	-	chr5.4:56763219-56763238	MS.gene26109:intron	50.0%
	CTGCTTCAAGTGGAAGAGGA+AGG	-	chr5.4:56763364-56763383	MS.gene26109:intron	50.0%
	CTTCCACTTGAAGCAGCCTT+AGG	+	chr5.4:56763360-56763379	None:intergenic	50.0%
	CTTCCCCTTCCACTAGTAGT+TGG	+	chr5.4:56763522-56763541	None:intergenic	50.0%
	GCTTCAAGTGGAAGAGGAAG+GGG	-	chr5.4:56763366-56763385	MS.gene26109:intron	50.0%
	GGGTATGGAGGAAGTGAAAG+AGG	+	chr5.4:56762625-56762644	None:intergenic	50.0%
	TCCACTTGAAGCAGCCTTAG+GGG	+	chr5.4:56763358-56763377	None:intergenic	50.0%
	TGGAAGACCACCAAAGCCAA+AGG	-	chr5.4:56763245-56763264	MS.gene26109:intron	50.0%
	TTCACTTCCTCCATACCCTG+AGG	-	chr5.4:56762627-56762646	MS.gene26109:CDS	50.0%
!	AATCCAAGTGGTGGAGATGG+TGG	-	chr5.4:56763426-56763445	MS.gene26109:intron	50.0%
!	AGGGGGTGTGAATTTACCTC+AGG	+	chr5.4:56762646-56762665	None:intergenic	50.0%
!	GCCAATGGATCCTTTGGCTT+TGG	+	chr5.4:56763258-56763277	None:intergenic	50.0%
!	GGGGGTGTGAATTTACCTCA+GGG	+	chr5.4:56762645-56762664	None:intergenic	50.0%
!!	CCTCTCTTTGGTGGTGCATT+TGG	+	chr5.4:56763222-56763241	None:intergenic	50.0%
	ACCCCTAAGGCTGCTTCAAG+TGG	-	chr5.4:56763354-56763373	MS.gene26109:intron	55.0%
	AGGAAGGGGTAGGCCAAAGA+AGG	-	chr5.4:56763380-56763399	MS.gene26109:intron	55.0%
	CAAGTGGAAGAGGAAGGGGT+AGG	-	chr5.4:56763370-56763389	MS.gene26109:intron	55.0%
	CTTCCACGTCCTCTCTTTGG+TGG	+	chr5.4:56763231-56763250	None:intergenic	55.0%
	GAAGCAGCCTTAGGGGTCTT+GGG	+	chr5.4:56763351-56763370	None:intergenic	55.0%
	GGTCTTCCACGTCCTCTCTT+TGG	+	chr5.4:56763234-56763253	None:intergenic	55.0%
	GGTGCATTAGGGTCCTTAGG+AGG	+	chr5.4:56763327-56763346	None:intergenic	55.0%
	GGTGGAGCCAATGGATCCTT+TGG	+	chr5.4:56763264-56763283	None:intergenic	55.0%
	TCCTTAGGAGGACGACCTCT+TGG	+	chr5.4:56763315-56763334	None:intergenic	55.0%
	TGAAGCAGCCTTAGGGGTCT+TGG	+	chr5.4:56763352-56763371	None:intergenic	55.0%
!	GGAGGTGCATTAGGGTCCTT+AGG	+	chr5.4:56763330-56763349	None:intergenic	55.0%
!	GGGTCTTGGGAGGTGCATTA+GGG	+	chr5.4:56763338-56763357	None:intergenic	55.0%
	CTAGTGGAAGGGGAAGGGGT+AGG	-	chr5.4:56763526-56763545	MS.gene26109:intron	60.0%
	CTGCTGTTCTGTCCCCACCA+AGG	-	chr5.4:56763289-56763308	MS.gene26109:intron	60.0%
	GACAGAACAGCAGCTGGTGG+TGG	+	chr5.4:56763282-56763301	None:intergenic	60.0%
	GCACCACCAAAGAGAGGACG+TGG	-	chr5.4:56763225-56763244	MS.gene26109:intron	60.0%
	GCACCACCATCTCCACCACT+TGG	+	chr5.4:56763432-56763451	None:intergenic	60.0%
	GCCAAGAGGTCGTCCTCCTA+AGG	-	chr5.4:56763311-56763330	MS.gene26109:intron	60.0%
	TGCACCTCCCAAGACCCCTA+AGG	-	chr5.4:56763341-56763360	MS.gene26109:intron	60.0%
!	GGGGTCTTGGGAGGTGCATT+AGG	+	chr5.4:56763339-56763358	None:intergenic	60.0%
!!	ACGACCTCTTGGCCTTGGTG+GGG	+	chr5.4:56763304-56763323	None:intergenic	60.0%
!!	GACGACCTCTTGGCCTTGGT+GGG	+	chr5.4:56763305-56763324	None:intergenic	60.0%
	CTGTCCCCACCAAGGCCAAG+AGG	-	chr5.4:56763297-56763316	MS.gene26109:intron	65.0%
	GCAGCCTTAGGGGTCTTGGG+AGG	+	chr5.4:56763348-56763367	None:intergenic	65.0%
	GGAGGACGACCTCTTGGCCT+TGG	+	chr5.4:56763309-56763328	None:intergenic	65.0%
	GGGAAGGGGTAGGCCTCCTA+AGG	-	chr5.4:56763536-56763555	MS.gene26109:intron	65.0%
	GGGGACAGAACAGCAGCTGG+TGG	+	chr5.4:56763285-56763304	None:intergenic	65.0%
	GGTGGGGACAGAACAGCAGC+TGG	+	chr5.4:56763288-56763307	None:intergenic	65.0%
	TGCTGCTGCTGCTGCTGCTG+AGG	-	chr5.4:56763449-56763468	MS.gene26109:intron	65.0%
!!	GCAGCTGGTGGTGGAGCCAA+TGG	+	chr5.4:56763273-56763292	None:intergenic	65.0%
!!	GGACGACCTCTTGGCCTTGG+TGG	+	chr5.4:56763306-56763325	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.4	gene	56762598	56763596	56762598	ID=MS.gene26109
chr5.4	mRNA	56762598	56763596	56762598	ID=MS.gene26109.t1;Parent=MS.gene26109
chr5.4	exon	56763546	56763596	56763546	ID=MS.gene26109.t1.exon1;Parent=MS.gene26109.t1
chr5.4	CDS	56763546	56763596	56763546	ID=cds.MS.gene26109.t1;Parent=MS.gene26109.t1
chr5.4	exon	56762598	56763029	56762598	ID=MS.gene26109.t1.exon2;Parent=MS.gene26109.t1
chr5.4	CDS	56762598	56763029	56762598	ID=cds.MS.gene26109.t1;Parent=MS.gene26109.t1

Gene Sequence

>MS.gene26109

ATGGCTACTCAAGAGGTTAATAAGCCTCTTTCACTTCCTCCATACCCTGAGGTAAATTCACACCCCCTAATTCAACATACACCCCTTTTCTTATTTTTTCAAGAAAATTAGTCTTTCATAGTAAAAGTAGCAATTTTTTCACTGATCTGTTTGATTTAACAATTTTTACTCACTTGGGTACTTTTTTCCCCTAACCAAATAGTAATCTTGAGCTGTTTTTGTAATCAAATAAGGAAATTTTTTTTAGGGTTTATGAAGAATTTAACCAAACAGAAAAAAGTCTTTGTATTAATTTCAGCTCAATTAATCTTGAAATTCTTTGTTTTTTCACTAACCCATTAACATGTTGAATGATTTTCTCAACATGGTATCTTCATTTCTGAAAAAAATTTGATTTTTATTTTTATTTTAACTCTGTTGTTGATTTTGTAGATGATTATGAAGGCACTGGAAGCACTGAATGAACCAAATGGTTCAAACAAATCATCAATTTCAAACTACATAGAATCAATCTATGGTGAATTACCAGAAGGCCATTCAATTGTTCTTGCAAATCACCTTAACCAGATGAAGGAAAATGGTGACCTTGTTTTTGCAAAGAACAACTACATGAAGCCTGATCCAAATGCACCACCAAAGAGAGGACGTGGAAGACCACCAAAGCCAAAGGATCCATTGGCTCCACCACCAGCTGCTGTTCTGTCCCCACCAAGGCCAAGAGGTCGTCCTCCTAAGGACCCTAATGCACCTCCCAAGACCCCTAAGGCTGCTTCAAGTGGAAGAGGAAGGGGTAGGCCAAAGAAGGTTCAAAGGACTGAGAATGTTTCAAATCCAAGTGGTGGAGATGGTGGTGCTGCTGCTGCTGCTGCTGCTGAGGTTGATGATGATGATGCTGCTCCAAGTGTTGCTGCTGTTGCTGTTCCAACTACTAGTGGAAGGGGAAGGGGTAGGCCTCCTAAGGTTAAGCCTCAGATGACTGAAGTGAGTGTTGAATCATAG

Protein sequence

>MS.gene26109.t1

MATQEVNKPLSLPPYPEMKENGDLVFAKNNYMKPDPNAPPKRGRGRPPKPKDPLAPPPAAVLSPPRPRGRPPKDPNAPPKTPKAASSGRGRGRPKKVQRTENVSNPSGGDGGAAAAAAAEVDDDDAAPSVAAVAVPTTSGRGRGRPPKVKPQMTEVSVES