Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049385.t1 | XP_013461533.1 | 98.3 | 233 | 4 | 0 | 1 | 233 | 1 | 233 | 3.00E-129 | 471.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049385.t1 | P27084 | 87.9 | 239 | 18 | 3 | 1 | 235 | 1 | 232 | 2.5e-116 | 419.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049385.t1 | I3T560 | 98.3 | 233 | 4 | 0 | 1 | 233 | 1 | 233 | 2.2e-129 | 471.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049385 | MS.gene053272 | 0.818891 | 1.55E-52 | -1.69E-46 |
| MS.gene049385 | MS.gene059338 | 0.959877 | 6.28E-118 | -1.69E-46 |
| MS.gene049385 | MS.gene06551 | 0.834327 | 3.20E-56 | -1.69E-46 |
| MS.gene049385 | MS.gene072153 | -0.810156 | 1.33E-50 | -1.69E-46 |
| MS.gene049385 | MS.gene36022 | 0.811075 | 8.39E-51 | -1.69E-46 |
| MS.gene049385 | MS.gene36571 | -0.804498 | 2.10E-49 | -1.69E-46 |
| MS.gene049385 | MS.gene39376 | 0.811258 | 7.66E-51 | -1.69E-46 |
| MS.gene049385 | MS.gene52592 | 0.811537 | 6.66E-51 | -1.69E-46 |
| MS.gene049385 | MS.gene68543 | -0.804369 | 2.23E-49 | -1.69E-46 |
| MS.gene049385 | MS.gene69206 | 0.83787 | 4.03E-57 | -1.69E-46 |
| MS.gene049385 | MS.gene74761 | 0.839114 | 1.92E-57 | -1.69E-46 |
| MS.gene049385 | MS.gene79650 | 0.831526 | 1.59E-55 | -1.69E-46 |
| MS.gene049385 | MS.gene81107 | 0.815842 | 7.51E-52 | -1.69E-46 |
| MS.gene049385 | MS.gene82742 | 0.803613 | 3.21E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049385.t1 | MTR_3g094250 | 98.283 | 233 | 4 | 0 | 1 | 233 | 1 | 233 | 2.66e-171 | 471 |
| MS.gene049385.t1 | MTR_3g078860 | 32.328 | 232 | 140 | 8 | 7 | 229 | 20 | 243 | 2.81e-29 | 110 |
| MS.gene049385.t1 | MTR_1g048990 | 32.189 | 233 | 129 | 9 | 24 | 232 | 42 | 269 | 4.83e-24 | 97.8 |
| MS.gene049385.t1 | MTR_1g048990 | 30.500 | 200 | 111 | 8 | 24 | 200 | 42 | 236 | 1.53e-14 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049385.t1 | AT3G10920 | 74.569 | 232 | 54 | 1 | 1 | 232 | 1 | 227 | 1.09e-129 | 365 |
| MS.gene049385.t1 | AT3G10920 | 74.138 | 232 | 54 | 2 | 1 | 232 | 1 | 226 | 2.90e-127 | 359 |
| MS.gene049385.t1 | AT3G56350 | 72.864 | 199 | 54 | 0 | 37 | 235 | 37 | 235 | 9.87e-110 | 315 |
| MS.gene049385.t1 | AT5G23310 | 35.417 | 192 | 111 | 7 | 43 | 227 | 57 | 242 | 4.89e-31 | 115 |
| MS.gene049385.t1 | AT5G51100 | 35.124 | 242 | 123 | 11 | 17 | 233 | 33 | 265 | 2.89e-27 | 106 |
| MS.gene049385.t1 | AT5G51100 | 35.922 | 206 | 99 | 10 | 52 | 233 | 1 | 197 | 3.95e-24 | 96.7 |
| MS.gene049385.t1 | AT5G51100 | 35.922 | 206 | 99 | 10 | 52 | 233 | 1 | 197 | 3.95e-24 | 96.7 |
| MS.gene049385.t1 | AT4G25100 | 34.634 | 205 | 120 | 7 | 34 | 233 | 11 | 206 | 1.56e-23 | 94.4 |
| MS.gene049385.t1 | AT4G25100 | 34.634 | 205 | 120 | 7 | 34 | 233 | 11 | 206 | 1.56e-23 | 94.4 |
| MS.gene049385.t1 | AT4G25100 | 34.634 | 205 | 120 | 7 | 34 | 233 | 11 | 206 | 1.56e-23 | 94.4 |
| MS.gene049385.t1 | AT4G25100 | 34.634 | 205 | 120 | 7 | 34 | 233 | 11 | 206 | 1.56e-23 | 94.4 |
| MS.gene049385.t1 | AT5G51100 | 32.203 | 236 | 129 | 10 | 17 | 233 | 33 | 256 | 1.49e-21 | 90.9 |
| MS.gene049385.t1 | AT4G25100 | 33.155 | 187 | 113 | 7 | 52 | 233 | 1 | 180 | 2.47e-20 | 85.5 |
| MS.gene049385.t1 | AT5G51100 | 33.854 | 192 | 97 | 9 | 17 | 184 | 33 | 218 | 1.24e-15 | 73.9 |
| MS.gene049385.t1 | AT5G51100 | 33.854 | 192 | 97 | 9 | 17 | 184 | 33 | 218 | 1.24e-15 | 73.9 |
Find 63 sgRNAs with CRISPR-Local
Find 318 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGGCCATTGACACAAATTT+TGG | 0.238876 | 3.1:-75376734 | MS.gene049385:CDS |
| ATGGCTGCTCCGATTGGTTT+TGG | 0.247445 | 3.1:+75378052 | None:intergenic |
| GGAACATGCCTACTACTTAC+AGG | 0.300626 | 3.1:-75375136 | MS.gene049385:intron |
| CAGACTATTTGAAGAACATT+TGG | 0.310661 | 3.1:-75373523 | MS.gene049385:CDS |
| CATTGCTCGGTATAGATGTT+TGG | 0.312843 | 3.1:-75375158 | MS.gene049385:CDS |
| ACATTTGGAAAGTTATTAAC+TGG | 0.319701 | 3.1:-75373508 | MS.gene049385:CDS |
| CATCCCAGGGCTTCCTTTGG+TGG | 0.328922 | 3.1:+75376755 | None:intergenic |
| CCCGATCTCGCTTACGACTA+TGG | 0.335820 | 3.1:-75377995 | MS.gene049385:CDS |
| GCCCATCCCAGGGCTTCCTT+TGG | 0.344963 | 3.1:+75376752 | None:intergenic |
| CAAATGTTCTTCAAATAGTC+TGG | 0.364416 | 3.1:+75373524 | None:intergenic |
| CGGCTCTTCAAGGGTCTGGA+TGG | 0.365032 | 3.1:-75376670 | MS.gene049385:CDS |
| ATTGCTCGGTATAGATGTTT+GGG | 0.369635 | 3.1:-75375157 | MS.gene049385:CDS |
| GGTTGAAACCACTGCAAATC+AGG | 0.379518 | 3.1:-75376489 | MS.gene049385:intron |
| GGTTACTAAAGGAACAAGTT+TGG | 0.383796 | 3.1:-75375184 | MS.gene049385:CDS |
| GCAGAAGGTGCGGCTCTTCA+AGG | 0.391180 | 3.1:-75376680 | MS.gene049385:CDS |
| CGCTTACGACTATGGCGCTT+TGG | 0.395122 | 3.1:-75377987 | MS.gene049385:CDS |
| TTCAAGCGCTTTGTTATAGT+TGG | 0.402926 | 3.1:+75377901 | None:intergenic |
| AGAACCAAAATTTGTGTCAA+TGG | 0.417539 | 3.1:+75376730 | None:intergenic |
| CCATAGTCGTAAGCGAGATC+GGG | 0.431311 | 3.1:+75377995 | None:intergenic |
| GGTGCGGCTCTTCAAGGGTC+TGG | 0.431552 | 3.1:-75376674 | MS.gene049385:CDS |
| TTTAGAAGCGTTGATACAAA+AGG | 0.451692 | 3.1:-75376708 | MS.gene049385:CDS |
| CAGGACCCATTGGTTACTAA+AGG | 0.452543 | 3.1:-75375195 | MS.gene049385:CDS |
| GCCATAGTCGTAAGCGAGAT+CGG | 0.460850 | 3.1:+75377994 | None:intergenic |
| GGCTCTTCAAGGGTCTGGAT+GGG | 0.462524 | 3.1:-75376669 | MS.gene049385:CDS |
| ATGATTTCGCCGCTGATGAC+AGG | 0.463952 | 3.1:+75377962 | None:intergenic |
| CTTGTTCCTTTAGTAACCAA+TGG | 0.466316 | 3.1:+75375189 | None:intergenic |
| GGTGGTTGAGGAATCAGCTT+TGG | 0.475008 | 3.1:+75377859 | None:intergenic |
| TTGAAGCTTAACGGTGGTTG+AGG | 0.479319 | 3.1:+75377847 | None:intergenic |
| TTGTGTCAATGGCCCATCCC+AGG | 0.494457 | 3.1:+75376741 | None:intergenic |
| TGAGCTATGGCTGCTCCGAT+TGG | 0.496269 | 3.1:+75378046 | None:intergenic |
| CACCAAAGGAAGCCCTGGGA+TGG | 0.496518 | 3.1:-75376754 | MS.gene049385:CDS |
| CGCAGTGATCCAAAACCAAT+CGG | 0.497408 | 3.1:-75378061 | MS.gene049385:CDS |
| TTGTTCCTTTAGTAACCAAT+GGG | 0.507204 | 3.1:+75375190 | None:intergenic |
| TGAACCACCAAAGGAAGCCC+TGG | 0.515363 | 3.1:-75376759 | MS.gene049385:CDS |
| CTCTTGACAAAGAATTGAAG+AGG | 0.516660 | 3.1:-75376517 | MS.gene049385:CDS |
| ACAAGTTTGGTTCCATTGCT+CGG | 0.516866 | 3.1:-75375171 | MS.gene049385:CDS |
| ACCAAAGGAAGCCCTGGGAT+GGG | 0.518424 | 3.1:-75376753 | MS.gene049385:CDS |
| CAGTAGGGTTCGAACGGCCA+TGG | 0.533866 | 3.1:+75378111 | None:intergenic |
| CACCTTGTGCAGGAAGGAGG+TGG | 0.538232 | 3.1:-75376782 | MS.gene049385:intron |
| CAGAAGGTGCGGCTCTTCAA+GGG | 0.543085 | 3.1:-75376679 | MS.gene049385:CDS |
| ATACAAAAGGTTAATGCAGA+AGG | 0.549829 | 3.1:-75376695 | MS.gene049385:CDS |
| GCTATCAAGTTCAACGGTGG+AGG | 0.550062 | 3.1:-75377821 | MS.gene049385:intron |
| TGTGTCAATGGCCCATCCCA+GGG | 0.553227 | 3.1:+75376742 | None:intergenic |
| TCTTCAAGGGTCTGGATGGG+TGG | 0.557370 | 3.1:-75376666 | MS.gene049385:intron |
| TTTGCTCAGTAGGGTTCGAA+CGG | 0.564962 | 3.1:+75378105 | None:intergenic |
| ATTGCTCTCATACACTTCAC+TGG | 0.578285 | 3.1:+75373478 | None:intergenic |
| TAAGCCACGGGATTGAGCTA+TGG | 0.589358 | 3.1:+75378033 | None:intergenic |
| GTGTGAAGACATGTAAGCCA+CGG | 0.597447 | 3.1:+75378020 | None:intergenic |
| GAAGTTTACCTGATTTGCAG+TGG | 0.599308 | 3.1:+75376481 | None:intergenic |
| CAAAATGCTATCAAGTTCAA+CGG | 0.606588 | 3.1:-75377827 | MS.gene049385:CDS |
| TGGATCACTGCGGAGGACGG+TGG | 0.607047 | 3.1:+75378072 | None:intergenic |
| TTACACCTTGTGCAGGAAGG+AGG | 0.610516 | 3.1:-75376785 | MS.gene049385:intron |
| TGTGAAGACATGTAAGCCAC+GGG | 0.611919 | 3.1:+75378021 | None:intergenic |
| CAAAGAATTGAAGAGGCTTG+TGG | 0.612630 | 3.1:-75376510 | MS.gene049385:CDS |
| AGGAGGTGGTGAACCACCAA+AGG | 0.612681 | 3.1:-75376768 | MS.gene049385:CDS |
| GAACCACCAAAGGAAGCCCT+GGG | 0.613579 | 3.1:-75376758 | MS.gene049385:CDS |
| CAAACATCTATACCGAGCAA+TGG | 0.635240 | 3.1:+75375159 | None:intergenic |
| GCAGCCATAGCTCAATCCCG+TGG | 0.639693 | 3.1:-75378037 | MS.gene049385:CDS |
| AAAGGTTAATGCAGAAGGTG+CGG | 0.640178 | 3.1:-75376690 | MS.gene049385:CDS |
| CATAGTCGTAAGCGAGATCG+GGG | 0.645280 | 3.1:+75377996 | None:intergenic |
| GCTTTGGAGCCTGTCATCAG+CGG | 0.648229 | 3.1:-75377971 | MS.gene049385:CDS |
| AAGTCTGATGATGTTTCTGA+TGG | 0.672245 | 3.1:+75377930 | None:intergenic |
| AATGCTATCAAGTTCAACGG+TGG | 0.689102 | 3.1:-75377824 | MS.gene049385:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATTTATGATATTTAAAAAT+GGG | - | chr3.1:75376239-75376258 | MS.gene049385:intron | 10.0% |
| !! | AAATGACAATTAATCATATA+TGG | + | chr3.1:75374654-75374673 | None:intergenic | 15.0% |
| !! | AATTCTTACAAAATCATTAA+AGG | - | chr3.1:75377153-75377172 | MS.gene049385:intron | 15.0% |
| !! | ATGTAACTAATATTAACTAT+TGG | + | chr3.1:75375321-75375340 | None:intergenic | 15.0% |
| !! | ATTCTTACAAAATCATTAAA+GGG | - | chr3.1:75377154-75377173 | MS.gene049385:intron | 15.0% |
| !! | GGAGAAAAATAAATATTATA+AGG | + | chr3.1:75377572-75377591 | None:intergenic | 15.0% |
| !! | GGATTTATGATATTTAAAAA+TGG | - | chr3.1:75376238-75376257 | MS.gene049385:intron | 15.0% |
| !! | GTTAATTAAACGAAAAATTA+CGG | - | chr3.1:75373841-75373860 | MS.gene049385:intron | 15.0% |
| !! | TTATTAGAGAAAAAATAAGA+GGG | - | chr3.1:75376845-75376864 | MS.gene049385:intron | 15.0% |
| !! | TTTACTCTTTATATGATTTA+TGG | - | chr3.1:75377121-75377140 | MS.gene049385:intron | 15.0% |
| !! | TTTATTAGAGAAAAAATAAG+AGG | - | chr3.1:75376844-75376863 | MS.gene049385:intron | 15.0% |
| !!! | TAATTTTTCGTTTAATTAAC+CGG | + | chr3.1:75373841-75373860 | None:intergenic | 15.0% |
| !!! | TATAATGTTTATTGATTTCA+GGG | - | chr3.1:75376050-75376069 | MS.gene049385:intron | 15.0% |
| !! | AAAAAAAAAGAGAGAAATGA+CGG | + | chr3.1:75373792-75373811 | None:intergenic | 20.0% |
| !! | AAAAAAAGTTCAACGTAAAA+AGG | + | chr3.1:75375734-75375753 | None:intergenic | 20.0% |
| !! | AAATTGATTAAGACAAAACA+AGG | + | chr3.1:75375022-75375041 | None:intergenic | 20.0% |
| !! | AATGCTCCATTATTATAATA+TGG | - | chr3.1:75375411-75375430 | MS.gene049385:intron | 20.0% |
| !! | AATTATTCTTGTGTTAGTTA+TGG | - | chr3.1:75376974-75376993 | MS.gene049385:intron | 20.0% |
| !! | AATTGATTAAGACAAAACAA+GGG | + | chr3.1:75375021-75375040 | None:intergenic | 20.0% |
| !! | ATGCTCCATTATTATAATAT+GGG | - | chr3.1:75375412-75375431 | MS.gene049385:intron | 20.0% |
| !! | ATTATTCTTGTGTTAGTTAT+GGG | - | chr3.1:75376975-75376994 | MS.gene049385:intron | 20.0% |
| !! | TCAAACCCATATTATAATAA+TGG | + | chr3.1:75375420-75375439 | None:intergenic | 20.0% |
| !! | TTCTTACAAAATCATTAAAG+GGG | - | chr3.1:75377155-75377174 | MS.gene049385:intron | 20.0% |
| !! | TTTCAAAAAATTTGCACTTA+AGG | + | chr3.1:75377861-75377880 | None:intergenic | 20.0% |
| !!! | AATTTGAACATTTTATTTGC+AGG | - | chr3.1:75376367-75376386 | MS.gene049385:intron | 20.0% |
| !!! | CTATAATGTTTATTGATTTC+AGG | - | chr3.1:75376049-75376068 | MS.gene049385:intron | 20.0% |
| !!! | TATTTATTTTTCTCCTCTTA+TGG | - | chr3.1:75377577-75377596 | MS.gene049385:intron | 20.0% |
| !!! | TGATTTTGTAAGAATTTGAT+AGG | + | chr3.1:75377149-75377168 | None:intergenic | 20.0% |
| !!! | TTCTGATTTTTCAAAACAAT+GGG | - | chr3.1:75375375-75375394 | MS.gene049385:intron | 20.0% |
| !!! | TTTTGTTTGATTACAAATTC+TGG | - | chr3.1:75375217-75375236 | MS.gene049385:intron | 20.0% |
| ! | AAAAAATAAGCCAATCCAAA+CGG | + | chr3.1:75374129-75374148 | None:intergenic | 25.0% |
| ! | AAATAAATTCTACAATGCAG+TGG | + | chr3.1:75377247-75377266 | None:intergenic | 25.0% |
| ! | ACATTTGGAAAGTTATTAAC+TGG | - | chr3.1:75378073-75378092 | MS.gene049385:CDS | 25.0% |
| ! | ACTTGATTATTGTACTCTAA+AGG | + | chr3.1:75377708-75377727 | None:intergenic | 25.0% |
| ! | CGTAAATAAGTCAATACAAA+CGG | - | chr3.1:75374305-75374324 | MS.gene049385:intron | 25.0% |
| ! | CTTGATTATTGTACTCTAAA+GGG | + | chr3.1:75377707-75377726 | None:intergenic | 25.0% |
| ! | GAGTAAATAGCATAAAAATG+AGG | + | chr3.1:75377108-75377127 | None:intergenic | 25.0% |
| ! | GATGGATATAGAAGAATTTA+TGG | + | chr3.1:75375603-75375622 | None:intergenic | 25.0% |
| ! | GTAAATAAGTCAATACAAAC+GGG | - | chr3.1:75374306-75374325 | MS.gene049385:intron | 25.0% |
| ! | GTTAAAAATAATGAGCATGA+CGG | + | chr3.1:75376288-75376307 | None:intergenic | 25.0% |
| ! | TAAACCTAAACAATAACGAT+GGG | - | chr3.1:75377342-75377361 | MS.gene049385:intron | 25.0% |
| ! | TAATTGAAATGTTTAGCTAC+AGG | + | chr3.1:75376568-75376587 | None:intergenic | 25.0% |
| ! | TAGAAATATCTTATGCCATA+AGG | + | chr3.1:75373936-75373955 | None:intergenic | 25.0% |
| ! | TATTCTTGTATCAATTAAGC+TGG | + | chr3.1:75377499-75377518 | None:intergenic | 25.0% |
| !! | AAATTTTACCTGTAAGTAGT+AGG | + | chr3.1:75376456-75376475 | None:intergenic | 25.0% |
| !! | ACTACTTACAGGTAAAATTT+TGG | - | chr3.1:75376456-75376475 | MS.gene049385:intron | 25.0% |
| !! | AGACAAGAAAAGTATAGAAA+TGG | + | chr3.1:75375527-75375546 | None:intergenic | 25.0% |
| !! | ATATCAACCATTCTATTTTC+TGG | - | chr3.1:75374684-75374703 | MS.gene049385:intron | 25.0% |
| !! | GACAAGAAAAGTATAGAAAT+GGG | + | chr3.1:75375526-75375545 | None:intergenic | 25.0% |
| !! | GATTAATTGTCATTTATTGC+AGG | - | chr3.1:75374659-75374678 | MS.gene049385:intron | 25.0% |
| !! | GATTTTTCCAGAAAATAGAA+TGG | + | chr3.1:75374694-75374713 | None:intergenic | 25.0% |
| !! | GCAAGATACGTAAATTTTAT+TGG | + | chr3.1:75375693-75375712 | None:intergenic | 25.0% |
| !! | GTTATCGTAGCTTAATTTTT+AGG | - | chr3.1:75373885-75373904 | MS.gene049385:intron | 25.0% |
| !! | TATCTTGCCACAATTTATTT+TGG | - | chr3.1:75375705-75375724 | MS.gene049385:intron | 25.0% |
| !! | TATGCAATTTTCTTCGTATA+TGG | - | chr3.1:75376199-75376218 | MS.gene049385:intron | 25.0% |
| !! | TTCCAATTTCTAGAGAAAAA+TGG | - | chr3.1:75376112-75376131 | MS.gene049385:intron | 25.0% |
| !! | TTGATTATTGTACTCTAAAG+GGG | + | chr3.1:75377706-75377725 | None:intergenic | 25.0% |
| !!! | ACTTATTCTAGCTTAAATAC+TGG | - | chr3.1:75374356-75374375 | MS.gene049385:intron | 25.0% |
| !!! | ATTTTTTCTCTTAAAATGCC+AGG | - | chr3.1:75376083-75376102 | MS.gene049385:intron | 25.0% |
| !!! | CTTCTGATTTTTCAAAACAA+TGG | - | chr3.1:75375374-75375393 | MS.gene049385:intron | 25.0% |
| !!! | TTCTATTTTCTGGAAAAATC+TGG | - | chr3.1:75374694-75374713 | MS.gene049385:intron | 25.0% |
| AAAAATAAGCCAATCCAAAC+GGG | + | chr3.1:75374128-75374147 | None:intergenic | 30.0% | |
| AAAAGTTCAACGTAAAAAGG+AGG | + | chr3.1:75375731-75375750 | None:intergenic | 30.0% | |
| AAACCTAAACAATAACGATG+GGG | - | chr3.1:75377343-75377362 | MS.gene049385:intron | 30.0% | |
| AAGAACCATTGAATACAGAA+TGG | + | chr3.1:75374764-75374783 | None:intergenic | 30.0% | |
| AATCCATATTGCTTGTAAAC+TGG | - | chr3.1:75374536-75374555 | MS.gene049385:intron | 30.0% | |
| ACAATGTCTGGTCATATATT+AGG | - | chr3.1:75377777-75377796 | MS.gene049385:intron | 30.0% | |
| ACCCATTTAGTGATATTGTT+GGG | - | chr3.1:75376142-75376161 | MS.gene049385:intron | 30.0% | |
| AGAACCAAAATTTGTGTCAA+TGG | + | chr3.1:75374854-75374873 | None:intergenic | 30.0% | |
| AGTTTACAAGCAATATGGAT+TGG | + | chr3.1:75374537-75374556 | None:intergenic | 30.0% | |
| ATACAAAAGGTTAATGCAGA+AGG | - | chr3.1:75374886-75374905 | MS.gene049385:intron | 30.0% | |
| ATAGAAGAATTTATGGTGGT+AGG | + | chr3.1:75375596-75375615 | None:intergenic | 30.0% | |
| ATGTGAGTTTATGTTAGTTC+AGG | + | chr3.1:75376658-75376677 | None:intergenic | 30.0% | |
| ATTAAGCTGTTTATCCAAAC+AGG | - | chr3.1:75374495-75374514 | MS.gene049385:intron | 30.0% | |
| ATTGCACTATAAATCAGCAA+TGG | + | chr3.1:75375940-75375959 | None:intergenic | 30.0% | |
| CAAAATGCTATCAAGTTCAA+CGG | - | chr3.1:75373754-75373773 | MS.gene049385:intron | 30.0% | |
| CAAATGTTCTTCAAATAGTC+TGG | + | chr3.1:75378060-75378079 | None:intergenic | 30.0% | |
| CACAAATATTTATGCCACTA+GGG | - | chr3.1:75374102-75374121 | MS.gene049385:intron | 30.0% | |
| CAGACTATTTGAAGAACATT+TGG | - | chr3.1:75378058-75378077 | MS.gene049385:CDS | 30.0% | |
| CAGCTTATAGATGTCATTAA+CGG | - | chr3.1:75374051-75374070 | MS.gene049385:intron | 30.0% | |
| CATAATACATGTTAATGCCA+GGG | + | chr3.1:75376622-75376641 | None:intergenic | 30.0% | |
| CTATCATAGTTTCTCTCAAA+AGG | + | chr3.1:75374579-75374598 | None:intergenic | 30.0% | |
| CTGGCATTAACATGTATTAT+GGG | - | chr3.1:75376621-75376640 | MS.gene049385:intron | 30.0% | |
| GATTTACATAGAATACATGC+TGG | + | chr3.1:75374965-75374984 | None:intergenic | 30.0% | |
| GGATATAGAAGAATTTATGG+TGG | + | chr3.1:75375600-75375619 | None:intergenic | 30.0% | |
| GTAAACCTAAACAATAACGA+TGG | - | chr3.1:75377341-75377360 | MS.gene049385:intron | 30.0% | |
| TAACTTCTAACAACCATAAG+AGG | + | chr3.1:75377593-75377612 | None:intergenic | 30.0% | |
| TAAGGTGTAAAGATCTAGAA+TGG | + | chr3.1:75375287-75375306 | None:intergenic | 30.0% | |
| TAGAAATTGGAATTCAATCC+TGG | + | chr3.1:75376104-75376123 | None:intergenic | 30.0% | |
| TAGAATAAGTCAATCCAAAC+AGG | + | chr3.1:75374346-75374365 | None:intergenic | 30.0% | |
| TATTTGAATTTGTCCCTGTT+TGG | + | chr3.1:75374512-75374531 | None:intergenic | 30.0% | |
| TCACAAATATTTATGCCACT+AGG | - | chr3.1:75374101-75374120 | MS.gene049385:intron | 30.0% | |
| TCCCAACAATATCACTAAAT+GGG | + | chr3.1:75376146-75376165 | None:intergenic | 30.0% | |
| TCTAATAAATTTCCACACTG+CGG | + | chr3.1:75376833-75376852 | None:intergenic | 30.0% | |
| TGATAAGTTAGTTCACCTTA+TGG | - | chr3.1:75373918-75373937 | MS.gene049385:intron | 30.0% | |
| TGATGAAATGAAACAATGTC+TGG | - | chr3.1:75377765-75377784 | MS.gene049385:intron | 30.0% | |
| TGTTATTCATAAGCTTGTCA+AGG | - | chr3.1:75374177-75374196 | MS.gene049385:intron | 30.0% | |
| TTAAGCTGTTTATCCAAACA+GGG | - | chr3.1:75374496-75374515 | MS.gene049385:intron | 30.0% | |
| TTATGGGAGTCAGTTATATA+GGG | - | chr3.1:75376919-75376938 | MS.gene049385:intron | 30.0% | |
| TTGTTCCTTTAGTAACCAAT+GGG | + | chr3.1:75376394-75376413 | None:intergenic | 30.0% | |
| ! | ACAGGTAAAATTTTGGACTT+GGG | - | chr3.1:75376463-75376482 | MS.gene049385:intron | 30.0% |
| ! | TACAGGTAAAATTTTGGACT+TGG | - | chr3.1:75376462-75376481 | MS.gene049385:intron | 30.0% |
| ! | TCTATACTTTTCTTGTCTGT+GGG | - | chr3.1:75375529-75375548 | MS.gene049385:intron | 30.0% |
| ! | TTCTATACTTTTCTTGTCTG+TGG | - | chr3.1:75375528-75375547 | MS.gene049385:intron | 30.0% |
| !! | CACCATTTTTCTCTAGAAAT+TGG | + | chr3.1:75376117-75376136 | None:intergenic | 30.0% |
| !! | CTTTTGAGAGAAACTATGAT+AGG | - | chr3.1:75374577-75374596 | MS.gene049385:intron | 30.0% |
| !! | TTTAGAAGCGTTGATACAAA+AGG | - | chr3.1:75374873-75374892 | MS.gene049385:intron | 30.0% |
| !!! | GATAGCATTTTGAAGCTTAA+CGG | + | chr3.1:75373746-75373765 | None:intergenic | 30.0% |
| !!! | TAGAGTTTTTTTGCTCAGTA+GGG | + | chr3.1:75373488-75373507 | None:intergenic | 30.0% |
| !!! | TTAGAGTTTTTTTGCTCAGT+AGG | + | chr3.1:75373489-75373508 | None:intergenic | 30.0% |
| AAAGAGAACATAGTCACTTG+AGG | + | chr3.1:75375888-75375907 | None:intergenic | 35.0% | |
| AACCAAGAGTTCATACAAAG+AGG | + | chr3.1:75375778-75375797 | None:intergenic | 35.0% | |
| AAGGAGGCCAAAATAAATTG+TGG | + | chr3.1:75375715-75375734 | None:intergenic | 35.0% | |
| ACAGAATGGTTTCCATGTAA+CGG | + | chr3.1:75374750-75374769 | None:intergenic | 35.0% | |
| AGTCAGTTATATAGGGATTG+AGG | - | chr3.1:75376926-75376945 | MS.gene049385:intron | 35.0% | |
| ATATTGCTTGTAAACTGGTC+GGG | - | chr3.1:75374541-75374560 | MS.gene049385:intron | 35.0% | |
| ATGATTTCACACAGAGATAG+TGG | + | chr3.1:75377662-75377681 | None:intergenic | 35.0% | |
| ATTGCTCGGTATAGATGTTT+GGG | - | chr3.1:75376424-75376443 | MS.gene049385:intron | 35.0% | |
| CAACAGTTTACTTAAGCTTC+AGG | - | chr3.1:75377526-75377545 | MS.gene049385:intron | 35.0% | |
| CATATTGCTTGTAAACTGGT+CGG | - | chr3.1:75374540-75374559 | MS.gene049385:intron | 35.0% | |
| CCATAATACATGTTAATGCC+AGG | + | chr3.1:75376623-75376642 | None:intergenic | 35.0% | |
| CCTGGCATTAACATGTATTA+TGG | - | chr3.1:75376620-75376639 | MS.gene049385:intron | 35.0% | |
| CTAATAAATTTCCACACTGC+GGG | + | chr3.1:75376832-75376851 | None:intergenic | 35.0% | |
| CTCTTGACAAAGAATTGAAG+AGG | - | chr3.1:75375064-75375083 | MS.gene049385:intron | 35.0% | |
| CTTAACAATCGGAATTCATG+AGG | + | chr3.1:75376802-75376821 | None:intergenic | 35.0% | |
| CTTATGGGAGTCAGTTATAT+AGG | - | chr3.1:75376918-75376937 | MS.gene049385:intron | 35.0% | |
| CTTATTTCCATAAACTCTCC+AGG | + | chr3.1:75374024-75374043 | None:intergenic | 35.0% | |
| CTTGTTCCTTTAGTAACCAA+TGG | + | chr3.1:75376395-75376414 | None:intergenic | 35.0% | |
| GACCCATTTAGTGATATTGT+TGG | - | chr3.1:75376141-75376160 | MS.gene049385:intron | 35.0% | |
| GGAAACCATTCTGTATTCAA+TGG | - | chr3.1:75374756-75374775 | MS.gene049385:intron | 35.0% | |
| GGTTACTAAAGGAACAAGTT+TGG | - | chr3.1:75376397-75376416 | MS.gene049385:intron | 35.0% | |
| GTATACAGCTACGAATTGTT+TGG | + | chr3.1:75375669-75375688 | None:intergenic | 35.0% | |
| GTCCCAACAATATCACTAAA+TGG | + | chr3.1:75376147-75376166 | None:intergenic | 35.0% | |
| TAATCAAGTCTTTCCTCACT+AGG | - | chr3.1:75377719-75377738 | MS.gene049385:intron | 35.0% | |
| TAGTGATATTGTTGGGACTT+GGG | - | chr3.1:75376149-75376168 | MS.gene049385:intron | 35.0% | |
| TGATTTCACACAGAGATAGT+GGG | + | chr3.1:75377661-75377680 | None:intergenic | 35.0% | |
| TGCAGTGGAAAAATATGTGA+AGG | + | chr3.1:75377232-75377251 | None:intergenic | 35.0% | |
| TTAGTGATATTGTTGGGACT+TGG | - | chr3.1:75376148-75376167 | MS.gene049385:intron | 35.0% | |
| TTCAAAAGAGTAGCATGCAA+AGG | - | chr3.1:75374624-75374643 | MS.gene049385:intron | 35.0% | |
| TTCTATGCATACGTCATTTC+TGG | - | chr3.1:75376324-75376343 | MS.gene049385:intron | 35.0% | |
| ! | AAAATAATGAGCATGACGGA+AGG | + | chr3.1:75376284-75376303 | None:intergenic | 35.0% |
| ! | AAATAATGAGCATGACGGAA+GGG | + | chr3.1:75376283-75376302 | None:intergenic | 35.0% |
| ! | AAGTCTGATGATGTTTCTGA+TGG | + | chr3.1:75373654-75373673 | None:intergenic | 35.0% |
| ! | ATAACTGACTCCCATAAGTT+GGG | + | chr3.1:75376916-75376935 | None:intergenic | 35.0% |
| ! | ATTATTGTACTCTAAAGGGG+AGG | + | chr3.1:75377703-75377722 | None:intergenic | 35.0% |
| ! | CTATTGGTAATAGCGATGTA+AGG | + | chr3.1:75375305-75375324 | None:intergenic | 35.0% |
| ! | TAGAAAACTAATGTGCCACT+AGG | + | chr3.1:75377986-75378005 | None:intergenic | 35.0% |
| ! | TATAACTGACTCCCATAAGT+TGG | + | chr3.1:75376917-75376936 | None:intergenic | 35.0% |
| ! | TTCAAGCGCTTTGTTATAGT+TGG | + | chr3.1:75373683-75373702 | None:intergenic | 35.0% |
| !! | AAAGAGTGTTACCCAACTTA+TGG | - | chr3.1:75376902-75376921 | MS.gene049385:CDS | 35.0% |
| !! | AACTAATCCTAGCTTTTCAC+AGG | - | chr3.1:75376730-75376749 | MS.gene049385:CDS | 35.0% |
| !! | AAGAGTGTTACCCAACTTAT+GGG | - | chr3.1:75376903-75376922 | MS.gene049385:CDS | 35.0% |
| !! | ACAGCTTAATTTGCAGCTTA+TGG | + | chr3.1:75374485-75374504 | None:intergenic | 35.0% |
| !! | ACATTTTGATGCAGTACAAC+TGG | + | chr3.1:75377288-75377307 | None:intergenic | 35.0% |
| !! | ACTAATCCTAGCTTTTCACA+GGG | - | chr3.1:75376731-75376750 | MS.gene049385:CDS | 35.0% |
| !! | ATTTTATTTGCAGGACCCAT+TGG | - | chr3.1:75376376-75376395 | MS.gene049385:intron | 35.0% |
| !! | GCGAAATCGTCATTTGTTAT+TGG | - | chr3.1:75373863-75373882 | MS.gene049385:intron | 35.0% |
| !!! | AGTGGCACATTAGTTTTCTA+AGG | - | chr3.1:75377986-75378005 | MS.gene049385:CDS | 35.0% |
| AAAGAGAATGCTGATGTGGT+AGG | - | chr3.1:75376871-75376890 | MS.gene049385:intron | 40.0% | |
| AAAGGTTAATGCAGAAGGTG+CGG | - | chr3.1:75374891-75374910 | MS.gene049385:intron | 40.0% | |
| AAGAGAATGCTGATGTGGTA+GGG | - | chr3.1:75376872-75376891 | MS.gene049385:intron | 40.0% | |
| AAGCTATCCTGGAGAGTTTA+TGG | - | chr3.1:75374014-75374033 | MS.gene049385:intron | 40.0% | |
| AAGGCTGAACTAAAGAAGAG+TGG | + | chr3.1:75376593-75376612 | None:intergenic | 40.0% | |
| AATGCTATCAAGTTCAACGG+TGG | - | chr3.1:75373757-75373776 | MS.gene049385:intron | 40.0% | |
| AATTTGTACTGCATTGCCAG+TGG | - | chr3.1:75375037-75375056 | MS.gene049385:intron | 40.0% | |
| AGAATTTATGGTGGTAGGCT+AGG | + | chr3.1:75375591-75375610 | None:intergenic | 40.0% | |
| AGGCAAAAACTTACACGAAC+AGG | + | chr3.1:75374722-75374741 | None:intergenic | 40.0% | |
| AGGCTGAACTAAAGAAGAGT+GGG | + | chr3.1:75376592-75376611 | None:intergenic | 40.0% | |
| ATAACATGCATCTTCTCCAC+TGG | + | chr3.1:75375641-75375660 | None:intergenic | 40.0% | |
| ATAACCAACTTTGCCTAGTG+AGG | + | chr3.1:75377735-75377754 | None:intergenic | 40.0% | |
| ATATGGACTCTGCATGTTGA+TGG | - | chr3.1:75376216-75376235 | MS.gene049385:intron | 40.0% | |
| ATTGCTCTCATACACTTCAC+TGG | + | chr3.1:75378106-75378125 | None:intergenic | 40.0% | |
| CAAACATCTATACCGAGCAA+TGG | + | chr3.1:75376425-75376444 | None:intergenic | 40.0% | |
| CAAAGAATTGAAGAGGCTTG+TGG | - | chr3.1:75375071-75375090 | MS.gene049385:intron | 40.0% | |
| CAATGGAGTCAGAGATATAG+TGG | + | chr3.1:75375923-75375942 | None:intergenic | 40.0% | |
| CACCTCTTTGTATGAACTCT+TGG | - | chr3.1:75375773-75375792 | MS.gene049385:intron | 40.0% | |
| CAGAGAACATTGTTCTCTGT+AGG | - | chr3.1:75376998-75377017 | MS.gene049385:intron | 40.0% | |
| CATTGCTCGGTATAGATGTT+TGG | - | chr3.1:75376423-75376442 | MS.gene049385:intron | 40.0% | |
| CCAAACAGGTCTTTCATCTA+GGG | + | chr3.1:75374332-75374351 | None:intergenic | 40.0% | |
| CGACCAGTTTACAAGCAATA+TGG | + | chr3.1:75374542-75374561 | None:intergenic | 40.0% | |
| GAATACATTTCTTTGCTGCG+AGG | + | chr3.1:75377824-75377843 | None:intergenic | 40.0% | |
| GAATTTATGGTGGTAGGCTA+GGG | + | chr3.1:75375590-75375609 | None:intergenic | 40.0% | |
| GATGAAAGAGAATGCTGATG+TGG | - | chr3.1:75376867-75376886 | MS.gene049385:intron | 40.0% | |
| GATTTCACACAGAGATAGTG+GGG | + | chr3.1:75377660-75377679 | None:intergenic | 40.0% | |
| GGATTGAGGAGAGAAAGAAT+GGG | - | chr3.1:75376940-75376959 | MS.gene049385:intron | 40.0% | |
| GTTAATGCCAGGGAATGAAA+AGG | + | chr3.1:75376612-75376631 | None:intergenic | 40.0% | |
| TAACATGCATCTTCTCCACT+GGG | + | chr3.1:75375640-75375659 | None:intergenic | 40.0% | |
| TATGGACTCTGCATGTTGAT+GGG | - | chr3.1:75376217-75376236 | MS.gene049385:intron | 40.0% | |
| TATTGCTTGTAAACTGGTCG+GGG | - | chr3.1:75374542-75374561 | MS.gene049385:intron | 40.0% | |
| TCCAAACAGGTCTTTCATCT+AGG | + | chr3.1:75374333-75374352 | None:intergenic | 40.0% | |
| TCTATGGAACGGATACTATC+TGG | - | chr3.1:75376757-75376776 | MS.gene049385:CDS | 40.0% | |
| TGATACTTTACACCTTGTGC+AGG | - | chr3.1:75374789-75374808 | MS.gene049385:intron | 40.0% | |
| TGGGAAGGACATTCTTTAGA+TGG | + | chr3.1:75375621-75375640 | None:intergenic | 40.0% | |
| TTCTTTGCCTCTTAGCATCT+CGG | + | chr3.1:75375166-75375185 | None:intergenic | 40.0% | |
| TTGCCCCATCGTTATTGTTT+AGG | + | chr3.1:75377349-75377368 | None:intergenic | 40.0% | |
| TTTGCCTTGATTCCGTTACA+TGG | - | chr3.1:75374735-75374754 | MS.gene049385:intron | 40.0% | |
| ! | AATAATGAGCATGACGGAAG+GGG | + | chr3.1:75376282-75376301 | None:intergenic | 40.0% |
| ! | ACAAGTTTGGTTCCATTGCT+CGG | - | chr3.1:75376410-75376429 | MS.gene049385:intron | 40.0% |
| ! | CTTGAGGCCTGTTGATTAAT+CGG | + | chr3.1:75375872-75375891 | None:intergenic | 40.0% |
| ! | GAAGTTTACCTGATTTGCAG+TGG | + | chr3.1:75375103-75375122 | None:intergenic | 40.0% |
| ! | GTTTCCATGTAACGGAATCA+AGG | + | chr3.1:75374742-75374761 | None:intergenic | 40.0% |
| ! | TGCACAAGGTGTAAAGTATC+AGG | + | chr3.1:75374790-75374809 | None:intergenic | 40.0% |
| ! | TGGGCCATTGACACAAATTT+TGG | - | chr3.1:75374847-75374866 | MS.gene049385:intron | 40.0% |
| ! | TTGAGGCCTGTTGATTAATC+GGG | + | chr3.1:75375871-75375890 | None:intergenic | 40.0% |
| !! | AGATAGTGGGGTAAATACAC+GGG | + | chr3.1:75377648-75377667 | None:intergenic | 40.0% |
| !! | CTAATCCTAGCTTTTCACAG+GGG | - | chr3.1:75376732-75376751 | MS.gene049385:CDS | 40.0% |
| !! | GAGATAGTGGGGTAAATACA+CGG | + | chr3.1:75377649-75377668 | None:intergenic | 40.0% |
| !! | GCTGTTTTGTTAAGCTATCC+TGG | - | chr3.1:75374003-75374022 | MS.gene049385:intron | 40.0% |
| !!! | AGCATTTTGAAGCTTAACGG+TGG | + | chr3.1:75373743-75373762 | None:intergenic | 40.0% |
| AAGCGAACAAACTGAGGACA+AGG | - | chr3.1:75376707-75376726 | MS.gene049385:CDS | 45.0% | |
| ACTTTACACCTTGTGCAGGA+AGG | - | chr3.1:75374793-75374812 | MS.gene049385:intron | 45.0% | |
| AGAAACCCCTGTGAAAAGCT+AGG | + | chr3.1:75376740-75376759 | None:intergenic | 45.0% | |
| AGAGAATGCTGATGTGGTAG+GGG | - | chr3.1:75376873-75376892 | MS.gene049385:intron | 45.0% | |
| AGAGAGGAATTGGAGAAAGG+GGG | + | chr3.1:75376493-75376512 | None:intergenic | 45.0% | |
| CATTGTTCTCTGTAGGAGCT+TGG | - | chr3.1:75377005-75377024 | MS.gene049385:intron | 45.0% | |
| CCCTAGATGAAAGACCTGTT+TGG | - | chr3.1:75374329-75374348 | MS.gene049385:intron | 45.0% | |
| CCTCTTAGCATCTCGGAAAA+GGG | + | chr3.1:75375159-75375178 | None:intergenic | 45.0% | |
| CGAGAGAGGAATTGGAGAAA+GGG | + | chr3.1:75376495-75376514 | None:intergenic | 45.0% | |
| CGCAGTGATCCAAAACCAAT+CGG | - | chr3.1:75373520-75373539 | MS.gene049385:CDS | 45.0% | |
| CGTCGTGTTTGTATGTCATC+AGG | + | chr3.1:75376683-75376702 | None:intergenic | 45.0% | |
| CTAAAGAATGTCCTTCCCAG+TGG | - | chr3.1:75375622-75375641 | MS.gene049385:intron | 45.0% | |
| CTTTCCTCACTAGGCAAAGT+TGG | - | chr3.1:75377728-75377747 | MS.gene049385:intron | 45.0% | |
| GAGAGAGGAATTGGAGAAAG+GGG | + | chr3.1:75376494-75376513 | None:intergenic | 45.0% | |
| GCAATGATGCTGAAGCTATC+TGG | - | chr3.1:75375955-75375974 | MS.gene049385:intron | 45.0% | |
| GGAAAAGGGACGAAGTTTGT+TGG | + | chr3.1:75375145-75375164 | None:intergenic | 45.0% | |
| GGAACATGCCTACTACTTAC+AGG | - | chr3.1:75376445-75376464 | MS.gene049385:intron | 45.0% | |
| GGGATTGAGGAGAGAAAGAA+TGG | - | chr3.1:75376939-75376958 | MS.gene049385:intron | 45.0% | |
| GGTTGAAACCACTGCAAATC+AGG | - | chr3.1:75375092-75375111 | MS.gene049385:intron | 45.0% | |
| GTAAATACACGGGGAGGAAA+AGG | + | chr3.1:75377638-75377657 | None:intergenic | 45.0% | |
| GTGTGAAGACATGTAAGCCA+CGG | + | chr3.1:75373564-75373583 | None:intergenic | 45.0% | |
| TACATTTCTTTGCTGCGAGG+AGG | + | chr3.1:75377821-75377840 | None:intergenic | 45.0% | |
| TACTGGCATAAGCACTAGTG+AGG | - | chr3.1:75374373-75374392 | MS.gene049385:intron | 45.0% | |
| TCACAGGGGTTTCTATGGAA+CGG | - | chr3.1:75376746-75376765 | MS.gene049385:CDS | 45.0% | |
| TGAAACTGCAGAGGACGTTA+TGG | + | chr3.1:75377379-75377398 | None:intergenic | 45.0% | |
| TGTGAAGACATGTAAGCCAC+GGG | + | chr3.1:75373563-75373582 | None:intergenic | 45.0% | |
| TTGAAGCTTAACGGTGGTTG+AGG | + | chr3.1:75373737-75373756 | None:intergenic | 45.0% | |
| TTGATGCAGTACAACTGGTC+AGG | + | chr3.1:75377283-75377302 | None:intergenic | 45.0% | |
| TTTGCTCAGTAGGGTTCGAA+CGG | + | chr3.1:75373479-75373498 | None:intergenic | 45.0% | |
| ! | AGTTCAGCCTTTTCATTCCC+TGG | - | chr3.1:75376602-75376621 | MS.gene049385:intron | 45.0% |
| ! | CAGGACCCATTGGTTACTAA+AGG | - | chr3.1:75376386-75376405 | MS.gene049385:intron | 45.0% |
| ! | CTGTTGATTAATCGGGGGTT+GGG | + | chr3.1:75375864-75375883 | None:intergenic | 45.0% |
| ! | GCTTTTCACAGGGGTTTCTA+TGG | - | chr3.1:75376741-75376760 | MS.gene049385:CDS | 45.0% |
| ! | TGAGGCCTGTTGATTAATCG+GGG | + | chr3.1:75375870-75375889 | None:intergenic | 45.0% |
| ! | TGGATGGGTGGTAAGTTTTG+TGG | - | chr3.1:75374927-75374946 | MS.gene049385:intron | 45.0% |
| !! | AAAGGGACGAAGTTTGTTGG+AGG | + | chr3.1:75375142-75375161 | None:intergenic | 45.0% |
| !! | AAGTTTGTTGGAGGTGGAAG+GGG | + | chr3.1:75375133-75375152 | None:intergenic | 45.0% |
| !! | ATGAAGCTCTGAAACTGCAG+AGG | + | chr3.1:75377388-75377407 | None:intergenic | 45.0% |
| !! | CAGTGTTCTGAGATTCCTAG+TGG | - | chr3.1:75377968-75377987 | MS.gene049385:CDS | 45.0% |
| !! | GAAGTTTGTTGGAGGTGGAA+GGG | + | chr3.1:75375134-75375153 | None:intergenic | 45.0% |
| !! | GATAGTGGGGTAAATACACG+GGG | + | chr3.1:75377647-75377666 | None:intergenic | 45.0% |
| !! | TACAAAGAGGTGCTCTGACT+CGG | + | chr3.1:75375765-75375784 | None:intergenic | 45.0% |
| !!! | CGATTGGTTTTGGATCACTG+CGG | + | chr3.1:75373522-75373541 | None:intergenic | 45.0% |
| !!! | ATTAAATTAATTTTGAATAA+TGG | - | chr3.1:75377414-75377433 | MS.gene049385:intron | 5.0% |
| !!! | TATTTTTATTTTTTATTATC+CGG | - | chr3.1:75373819-75373838 | MS.gene049385:intron | 5.0% |
| AAATTTCCACACTGCGGGCA+TGG | + | chr3.1:75376827-75376846 | None:intergenic | 50.0% | |
| AATTTCCACACTGCGGGCAT+GGG | + | chr3.1:75376826-75376845 | None:intergenic | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | + | chr3.1:75376516-75376535 | None:intergenic | 50.0% | |
| AGAGGAATTGGAGAAAGGGG+GGG | + | chr3.1:75376491-75376510 | None:intergenic | 50.0% | |
| ATGATTTCGCCGCTGATGAC+AGG | + | chr3.1:75373622-75373641 | None:intergenic | 50.0% | |
| ATGCATCTTCTCCACTGGGA+AGG | + | chr3.1:75375636-75375655 | None:intergenic | 50.0% | |
| CATAGTCGTAAGCGAGATCG+GGG | + | chr3.1:75373588-75373607 | None:intergenic | 50.0% | |
| CCAACCCCCGATTAATCAAC+AGG | - | chr3.1:75375862-75375881 | MS.gene049385:intron | 50.0% | |
| CCATAGTCGTAAGCGAGATC+GGG | + | chr3.1:75373589-75373608 | None:intergenic | 50.0% | |
| CGGGCATGGGTCTTAACAAT+CGG | + | chr3.1:75376813-75376832 | None:intergenic | 50.0% | |
| CGTCTCAAGCGAACAAACTG+AGG | - | chr3.1:75376701-75376720 | MS.gene049385:CDS | 50.0% | |
| CTTTGTCAAGAGCAAGCCAC+TGG | + | chr3.1:75375056-75375075 | None:intergenic | 50.0% | |
| GAGAATGCTGATGTGGTAGG+GGG | - | chr3.1:75376874-75376893 | MS.gene049385:intron | 50.0% | |
| GAGAGGAATTGGAGAAAGGG+GGG | + | chr3.1:75376492-75376511 | None:intergenic | 50.0% | |
| GCCATAGTCGTAAGCGAGAT+CGG | + | chr3.1:75373590-75373609 | None:intergenic | 50.0% | |
| GCCTCTTAGCATCTCGGAAA+AGG | + | chr3.1:75375160-75375179 | None:intergenic | 50.0% | |
| GCGAGAGAGGAATTGGAGAA+AGG | + | chr3.1:75376496-75376515 | None:intergenic | 50.0% | |
| GCTATCAAGTTCAACGGTGG+AGG | - | chr3.1:75373760-75373779 | MS.gene049385:intron | 50.0% | |
| GGTGGTTGAGGAATCAGCTT+TGG | + | chr3.1:75373725-75373744 | None:intergenic | 50.0% | |
| TAAGCCACGGGATTGAGCTA+TGG | + | chr3.1:75373551-75373570 | None:intergenic | 50.0% | |
| TTACACCTTGTGCAGGAAGG+AGG | - | chr3.1:75374796-75374815 | MS.gene049385:intron | 50.0% | |
| ! | CCCTTTTCCGAGATGCTAAG+AGG | - | chr3.1:75375156-75375175 | MS.gene049385:CDS | 50.0% |
| ! | CCTGTTGATTAATCGGGGGT+TGG | + | chr3.1:75375865-75375884 | None:intergenic | 50.0% |
| ! | GAGGCCTGTTGATTAATCGG+GGG | + | chr3.1:75375869-75375888 | None:intergenic | 50.0% |
| ! | TTTTGGATCACTGCGGAGGA+CGG | + | chr3.1:75373515-75373534 | None:intergenic | 50.0% |
| !! | CGAAGTTTGTTGGAGGTGGA+AGG | + | chr3.1:75375135-75375154 | None:intergenic | 50.0% |
| !!! | ATGGCTGCTCCGATTGGTTT+TGG | + | chr3.1:75373532-75373551 | None:intergenic | 50.0% |
| !!! | TTGGTTTTGGATCACTGCGG+AGG | + | chr3.1:75373519-75373538 | None:intergenic | 50.0% |
| ACCAAAGGAAGCCCTGGGAT+GGG | - | chr3.1:75374828-75374847 | MS.gene049385:intron | 55.0% | |
| AGGAGGTGGTGAACCACCAA+AGG | - | chr3.1:75374813-75374832 | MS.gene049385:intron | 55.0% | |
| AGTGGGGTAAATACACGGGG+AGG | + | chr3.1:75377644-75377663 | None:intergenic | 55.0% | |
| CCCGATCTCGCTTACGACTA+TGG | - | chr3.1:75373586-75373605 | MS.gene049385:intron | 55.0% | |
| CGCTTACGACTATGGCGCTT+TGG | - | chr3.1:75373594-75373613 | MS.gene049385:intron | 55.0% | |
| GAACCACCAAAGGAAGCCCT+GGG | - | chr3.1:75374823-75374842 | MS.gene049385:intron | 55.0% | |
| GAGAGAGGCGAGAGAGGAAT+TGG | + | chr3.1:75376503-75376522 | None:intergenic | 55.0% | |
| GGCTCTTCAAGGGTCTGGAT+GGG | - | chr3.1:75374912-75374931 | MS.gene049385:intron | 55.0% | |
| TCTTCAAGGGTCTGGATGGG+TGG | - | chr3.1:75374915-75374934 | MS.gene049385:intron | 55.0% | |
| TGAACCACCAAAGGAAGCCC+TGG | - | chr3.1:75374822-75374841 | MS.gene049385:intron | 55.0% | |
| TGAGCTATGGCTGCTCCGAT+TGG | + | chr3.1:75373538-75373557 | None:intergenic | 55.0% | |
| TGTGTCAATGGCCCATCCCA+GGG | + | chr3.1:75374842-75374861 | None:intergenic | 55.0% | |
| TTATGCCACTAGGGCCCGTT+TGG | - | chr3.1:75374111-75374130 | MS.gene049385:intron | 55.0% | |
| TTGTGTCAATGGCCCATCCC+AGG | + | chr3.1:75374843-75374862 | None:intergenic | 55.0% | |
| ! | CAGAAGGTGCGGCTCTTCAA+GGG | - | chr3.1:75374902-75374921 | MS.gene049385:intron | 55.0% |
| !! | AGCTTGGCTCTGTGGGCATT+AGG | - | chr3.1:75377021-75377040 | MS.gene049385:intron | 55.0% |
| !! | CTGTAGGAGCTTGGCTCTGT+GGG | - | chr3.1:75377014-75377033 | MS.gene049385:intron | 55.0% |
| !! | GCTTTGGAGCCTGTCATCAG+CGG | - | chr3.1:75373610-75373629 | MS.gene049385:intron | 55.0% |
| !! | GGGACGAAGTTTGTTGGAGG+TGG | + | chr3.1:75375139-75375158 | None:intergenic | 55.0% |
| !! | TCTGTAGGAGCTTGGCTCTG+TGG | - | chr3.1:75377013-75377032 | MS.gene049385:intron | 55.0% |
| CACCAAAGGAAGCCCTGGGA+TGG | - | chr3.1:75374827-75374846 | MS.gene049385:intron | 60.0% | |
| CACCACCTCCTTCCTGCACA+AGG | + | chr3.1:75374804-75374823 | None:intergenic | 60.0% | |
| CACCTTGTGCAGGAAGGAGG+TGG | - | chr3.1:75374799-75374818 | MS.gene049385:intron | 60.0% | |
| CATCCCAGGGCTTCCTTTGG+TGG | + | chr3.1:75374829-75374848 | None:intergenic | 60.0% | |
| CCAATCCAAACGGGCCCTAG+TGG | + | chr3.1:75374119-75374138 | None:intergenic | 60.0% | |
| CCACTAGGGCCCGTTTGGAT+TGG | - | chr3.1:75374116-75374135 | MS.gene049385:intron | 60.0% | |
| CGGCTCTTCAAGGGTCTGGA+TGG | - | chr3.1:75374911-75374930 | MS.gene049385:intron | 60.0% | |
| GAGAGAGAGAGAGGCGAGAG+AGG | + | chr3.1:75376509-75376528 | None:intergenic | 60.0% | |
| GCAGCCATAGCTCAATCCCG+TGG | - | chr3.1:75373544-75373563 | MS.gene049385:intron | 60.0% | |
| TAAGACCCATGCCCGCAGTG+TGG | - | chr3.1:75376818-75376837 | MS.gene049385:intron | 60.0% | |
| TGCTGATGTGGTAGGGGGTG+AGG | - | chr3.1:75376879-75376898 | MS.gene049385:CDS | 60.0% | |
| TGGAGGTGGAAGGGGAAGAG+AGG | + | chr3.1:75375125-75375144 | None:intergenic | 60.0% | |
| ! | GCAGAAGGTGCGGCTCTTCA+AGG | - | chr3.1:75374901-75374920 | MS.gene049385:intron | 60.0% |
| GCCCATCCCAGGGCTTCCTT+TGG | + | chr3.1:75374832-75374851 | None:intergenic | 65.0% | |
| GGTGCGGCTCTTCAAGGGTC+TGG | - | chr3.1:75374907-75374926 | MS.gene049385:intron | 65.0% | |
| TGGATCACTGCGGAGGACGG+TGG | + | chr3.1:75373512-75373531 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 75373472 | 75378131 | 75373472 | ID=MS.gene049385 |
| chr3.1 | mRNA | 75373472 | 75378131 | 75373472 | ID=MS.gene049385.t1;Parent=MS.gene049385 |
| chr3.1 | exon | 75377822 | 75378131 | 75377822 | ID=MS.gene049385.t1.exon1;Parent=MS.gene049385.t1 |
| chr3.1 | CDS | 75377822 | 75378131 | 75377822 | ID=cds.MS.gene049385.t1;Parent=MS.gene049385.t1 |
| chr3.1 | exon | 75376876 | 75376922 | 75376876 | ID=MS.gene049385.t1.exon2;Parent=MS.gene049385.t1 |
| chr3.1 | CDS | 75376876 | 75376922 | 75376876 | ID=cds.MS.gene049385.t1;Parent=MS.gene049385.t1 |
| chr3.1 | exon | 75376667 | 75376792 | 75376667 | ID=MS.gene049385.t1.exon3;Parent=MS.gene049385.t1 |
| chr3.1 | CDS | 75376667 | 75376792 | 75376667 | ID=cds.MS.gene049385.t1;Parent=MS.gene049385.t1 |
| chr3.1 | exon | 75376490 | 75376546 | 75376490 | ID=MS.gene049385.t1.exon4;Parent=MS.gene049385.t1 |
| chr3.1 | CDS | 75376490 | 75376546 | 75376490 | ID=cds.MS.gene049385.t1;Parent=MS.gene049385.t1 |
| chr3.1 | exon | 75375137 | 75375214 | 75375137 | ID=MS.gene049385.t1.exon5;Parent=MS.gene049385.t1 |
| chr3.1 | CDS | 75375137 | 75375214 | 75375137 | ID=cds.MS.gene049385.t1;Parent=MS.gene049385.t1 |
| chr3.1 | exon | 75373472 | 75373561 | 75373472 | ID=MS.gene049385.t1.exon6;Parent=MS.gene049385.t1 |
| chr3.1 | CDS | 75373472 | 75373561 | 75373472 | ID=cds.MS.gene049385.t1;Parent=MS.gene049385.t1 |
| Gene Sequence |
| Protein sequence |
