Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06551.t1 | XP_013461480.1 | 98.1 | 312 | 6 | 0 | 1 | 312 | 1 | 312 | 7.60E-169 | 603.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06551.t1 | A0A072VBF8 | 98.1 | 312 | 6 | 0 | 1 | 312 | 1 | 312 | 5.5e-169 | 603.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049385 | MS.gene06551 | 0.834327 | 3.20E-56 | -1.69E-46 |
| MS.gene049419 | MS.gene06551 | 0.976992 | 6.72E-143 | -1.69E-46 |
| MS.gene050105 | MS.gene06551 | -0.8179 | 2.59E-52 | -1.69E-46 |
| MS.gene051122 | MS.gene06551 | -0.820607 | 6.27E-53 | -1.69E-46 |
| MS.gene051848 | MS.gene06551 | 0.804449 | 2.15E-49 | -1.69E-46 |
| MS.gene051926 | MS.gene06551 | 0.813328 | 2.71E-51 | -1.69E-46 |
| MS.gene052674 | MS.gene06551 | -0.816825 | 4.53E-52 | -1.69E-46 |
| MS.gene052675 | MS.gene06551 | -0.816904 | 4.35E-52 | -1.69E-46 |
| MS.gene052677 | MS.gene06551 | -0.817536 | 3.13E-52 | -1.69E-46 |
| MS.gene052954 | MS.gene06551 | -0.80274 | 4.86E-49 | -1.69E-46 |
| MS.gene053006 | MS.gene06551 | -0.821669 | 3.57E-53 | -1.69E-46 |
| MS.gene053272 | MS.gene06551 | 0.827468 | 1.54E-54 | -1.69E-46 |
| MS.gene054479 | MS.gene06551 | -0.830652 | 2.60E-55 | -1.69E-46 |
| MS.gene05469 | MS.gene06551 | -0.803394 | 3.56E-49 | -1.69E-46 |
| MS.gene055701 | MS.gene06551 | -0.805445 | 1.33E-49 | -1.69E-46 |
| MS.gene055841 | MS.gene06551 | -0.812089 | 5.05E-51 | -1.69E-46 |
| MS.gene056779 | MS.gene06551 | -0.803877 | 2.83E-49 | -1.69E-46 |
| MS.gene057156 | MS.gene06551 | 0.862317 | 5.52E-64 | -1.69E-46 |
| MS.gene057208 | MS.gene06551 | -0.837615 | 4.68E-57 | -1.69E-46 |
| MS.gene057371 | MS.gene06551 | -0.809458 | 1.87E-50 | -1.69E-46 |
| MS.gene058081 | MS.gene06551 | -0.819294 | 1.25E-52 | -1.69E-46 |
| MS.gene058223 | MS.gene06551 | 0.820651 | 6.13E-53 | -1.69E-46 |
| MS.gene058355 | MS.gene06551 | -0.815182 | 1.05E-51 | -1.69E-46 |
| MS.gene059338 | MS.gene06551 | 0.819204 | 1.31E-52 | -1.69E-46 |
| MS.gene05985 | MS.gene06551 | 0.814143 | 1.79E-51 | -1.69E-46 |
| MS.gene059952 | MS.gene06551 | -0.813613 | 2.34E-51 | -1.69E-46 |
| MS.gene060850 | MS.gene06551 | -0.814617 | 1.41E-51 | -1.69E-46 |
| MS.gene060851 | MS.gene06551 | -0.821004 | 5.08E-53 | -1.69E-46 |
| MS.gene060852 | MS.gene06551 | -0.823661 | 1.23E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06551.t1 | MTR_3g093690 | 97.708 | 349 | 8 | 0 | 1 | 349 | 1 | 349 | 0.0 | 706 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06551.t1 | AT2G40800 | 62.865 | 342 | 116 | 3 | 12 | 347 | 41 | 377 | 2.50e-142 | 408 |
| MS.gene06551.t1 | AT3G56430 | 56.369 | 369 | 115 | 6 | 12 | 343 | 74 | 433 | 3.13e-136 | 395 |
| MS.gene06551.t1 | AT2G40800 | 57.087 | 254 | 98 | 3 | 12 | 259 | 41 | 289 | 3.41e-93 | 280 |
Find 106 sgRNAs with CRISPR-Local
Find 327 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCATTCTATAAACTTTATC+AGG | 0.141587 | 3.2:-78603346 | None:intergenic |
| AAGGAAGAGAGGATGGATTT+AGG | 0.151084 | 3.2:-78602006 | None:intergenic |
| CGACTGGGAGGGTGGAAAAT+TGG | 0.172637 | 3.2:-78602042 | None:intergenic |
| AGGAAGAGAGGATGGATTTA+GGG | 0.234938 | 3.2:-78602005 | None:intergenic |
| TTGTTCTTTGTGCTATTCTT+TGG | 0.247047 | 3.2:+78602250 | MS.gene06551:CDS |
| GACTGGGAGGGTGGAAAATT+GGG | 0.256416 | 3.2:-78602041 | None:intergenic |
| ATCAAGATCATCAAATTCTT+TGG | 0.261593 | 3.2:-78605961 | None:intergenic |
| GTTGATGTTCCCATGGCTTC+TGG | 0.275349 | 3.2:+78605834 | MS.gene06551:CDS |
| CAGCAGCACCAAACAGAAAA+AGG | 0.308344 | 3.2:-78602224 | None:intergenic |
| TCTGAAGGCATGGCTAAGTA+TGG | 0.317661 | 3.2:+78602312 | MS.gene06551:CDS |
| AACCTCCTGACGCTCTCTTT+TGG | 0.326013 | 3.2:-78606006 | None:intergenic |
| ATCAGATACAAACGCTGGTC+TGG | 0.340990 | 3.2:-78605858 | None:intergenic |
| TGCTCAGATTCTTGAAGTTA+TGG | 0.348723 | 3.2:+78603390 | MS.gene06551:CDS |
| AGAAAATCAAGCCAAGTCTT+AGG | 0.350882 | 3.2:+78603476 | MS.gene06551:CDS |
| GGAGGAAGAGTTGGTGGAGT+TGG | 0.355408 | 3.2:-78601915 | None:intergenic |
| TTTCAAGGCCAAGAAGGTTC+TGG | 0.364522 | 3.2:+78602113 | MS.gene06551:CDS |
| AGGTTTCTCCAGAACCTTCT+TGG | 0.366103 | 3.2:-78602121 | None:intergenic |
| ATTCTTTGGAGGATTATGTT+TGG | 0.371669 | 3.2:+78602264 | MS.gene06551:CDS |
| GCTCAGATTCTTGAAGTTAT+GGG | 0.387775 | 3.2:+78603391 | MS.gene06551:CDS |
| GAGGAAGAGTTGGTGGAGTT+GGG | 0.388624 | 3.2:-78601914 | None:intergenic |
| GAAGAGTGGTGAAGTGGAGG+AGG | 0.390340 | 3.2:-78601961 | None:intergenic |
| TTCTTTGTGCTATTCTTTGG+AGG | 0.401581 | 3.2:+78602253 | MS.gene06551:CDS |
| GATGGATTTAGGGTGGGGTG+TGG | 0.403426 | 3.2:-78601995 | None:intergenic |
| GACCAGCGTTTGTATCTGAT+TGG | 0.406586 | 3.2:+78605861 | MS.gene06551:CDS |
| GGATGCCAAAAGAGAGCGTC+AGG | 0.410942 | 3.2:+78606001 | MS.gene06551:CDS |
| TCTGAAAACGCCGATACGAC+TGG | 0.413528 | 3.2:-78602058 | None:intergenic |
| AACTTGAGGCTTTCTTCAAA+AGG | 0.425511 | 3.2:+78602196 | MS.gene06551:CDS |
| CTCTTAAATCAGTTCCTGTA+AGG | 0.432262 | 3.2:-78603420 | None:intergenic |
| ACTGGGAGGGTGGAAAATTG+GGG | 0.435232 | 3.2:-78602040 | None:intergenic |
| GCTGCCATTGCTTTCACCAC+AGG | 0.445208 | 3.2:-78605936 | None:intergenic |
| GTTGAGAAGGTTGAAAATAG+TGG | 0.449934 | 3.2:+78606050 | MS.gene06551:CDS |
| CATAAAAGGTTCTGAGAGAA+AGG | 0.450312 | 3.2:+78603525 | MS.gene06551:CDS |
| AGCAACAATAGCAGCAGAAA+GGG | 0.450974 | 3.2:-78602343 | None:intergenic |
| ATGGATTTAGGGTGGGGTGT+GGG | 0.454697 | 3.2:-78601994 | None:intergenic |
| TTAAGAGCCTATGTGATGTC+AGG | 0.454783 | 3.2:+78603436 | MS.gene06551:CDS |
| CTGCCATTGCTTTCACCACA+GGG | 0.455409 | 3.2:-78605935 | None:intergenic |
| AAGAGTGGTGAAGTGGAGGA+GGG | 0.455436 | 3.2:-78601960 | None:intergenic |
| TGTTGTTCTTTCTGAAGGCA+TGG | 0.459160 | 3.2:+78602302 | MS.gene06551:CDS |
| GGTGGCGGAGGAAGAGTTGG+TGG | 0.460218 | 3.2:-78601921 | None:intergenic |
| GTGCGGAAGTGAAAGGGTGG+CGG | 0.461090 | 3.2:-78601936 | None:intergenic |
| CGGAAGTGAAAGGGTGGCGG+AGG | 0.461997 | 3.2:-78601933 | None:intergenic |
| ACCACTGAACCTCGGTTTCA+AGG | 0.465783 | 3.2:+78602098 | MS.gene06551:CDS |
| CAACGTTTGCTCCTAAGACT+TGG | 0.466386 | 3.2:-78603487 | None:intergenic |
| ATGGAGGAAGGAAGAGAGGA+TGG | 0.475280 | 3.2:-78602013 | None:intergenic |
| CTGGTCTGGGCCAGAAGCCA+TGG | 0.478808 | 3.2:-78605844 | None:intergenic |
| TTTGAAGAGTGGTGAAGTGG+AGG | 0.482982 | 3.2:-78601964 | None:intergenic |
| GAGTGGTGAAGTGGAGGAGG+GGG | 0.485967 | 3.2:-78601958 | None:intergenic |
| GTGAATGGAGGAAGGAAGAG+AGG | 0.491713 | 3.2:-78602017 | None:intergenic |
| TCAGATACAAACGCTGGTCT+GGG | 0.495241 | 3.2:-78605857 | None:intergenic |
| TGATGATCTTGATGAGATTG+AGG | 0.500289 | 3.2:+78605971 | MS.gene06551:CDS |
| CTTAAATCAGTTCCTGTAAG+GGG | 0.502763 | 3.2:-78603418 | None:intergenic |
| AGAGAGGATGGATTTAGGGT+GGG | 0.506943 | 3.2:-78602001 | None:intergenic |
| CACGCGGTACCGTGAGGCCA+TGG | 0.508270 | 3.2:+78602167 | MS.gene06551:CDS |
| CCTCGGTTTCAAGGCCAAGA+AGG | 0.508496 | 3.2:+78602107 | MS.gene06551:CDS |
| TCTTGATGAGATTGAGGATG+AGG | 0.521181 | 3.2:+78605977 | MS.gene06551:CDS |
| AAGGGTGGCGGAGGAAGAGT+TGG | 0.521568 | 3.2:-78601924 | None:intergenic |
| AAACATCAATGATTATTGCT+TGG | 0.522621 | 3.2:-78606075 | None:intergenic |
| CCCTGATAAAGTTTATAGAA+TGG | 0.526896 | 3.2:+78603345 | MS.gene06551:CDS |
| TTCCACCCTCCCAGTCGTAT+CGG | 0.529276 | 3.2:+78602048 | MS.gene06551:CDS |
| AAGAGAGGATGGATTTAGGG+TGG | 0.531745 | 3.2:-78602002 | None:intergenic |
| CTGGGAGGGTGGAAAATTGG+GGG | 0.535393 | 3.2:-78602039 | None:intergenic |
| AGAGTGGTGAAGTGGAGGAG+GGG | 0.535576 | 3.2:-78601959 | None:intergenic |
| CCATTCTATAAACTTTATCA+GGG | 0.535969 | 3.2:-78603345 | None:intergenic |
| AAGCAACAATAGCAGCAGAA+AGG | 0.536715 | 3.2:-78602344 | None:intergenic |
| GCATCGAGAAGAAGTTGAGA+AGG | 0.537185 | 3.2:+78606037 | MS.gene06551:CDS |
| CTGAAAACGCCGATACGACT+GGG | 0.540096 | 3.2:-78602057 | None:intergenic |
| CCTTCTTGGCCTTGAAACCG+AGG | 0.540343 | 3.2:-78602107 | None:intergenic |
| CGCCGATACGACTGGGAGGG+TGG | 0.545100 | 3.2:-78602050 | None:intergenic |
| GGGGTGCGGAAGTGAAAGGG+TGG | 0.550967 | 3.2:-78601939 | None:intergenic |
| TCTGGAGAAACCTACGGCCG+CGG | 0.555143 | 3.2:+78602131 | MS.gene06551:CDS |
| GAGAGGATGGATTTAGGGTG+GGG | 0.563342 | 3.2:-78602000 | None:intergenic |
| GCTAGCCGTTGATGTTCCCA+TGG | 0.565913 | 3.2:+78605827 | MS.gene06551:CDS |
| AGGGTTTGTATATCCGCTCA+AGG | 0.566257 | 3.2:+78603311 | MS.gene06551:intron |
| TCTTAAATCAGTTCCTGTAA+GGG | 0.573835 | 3.2:-78603419 | None:intergenic |
| TGGTCTGGGCCAGAAGCCAT+GGG | 0.574055 | 3.2:-78605843 | None:intergenic |
| AAAAGAGTACACGGTTGGTG+GGG | 0.574607 | 3.2:+78605890 | MS.gene06551:CDS |
| GCCTTGAAACCGAGGTTCAG+TGG | 0.579549 | 3.2:-78602099 | None:intergenic |
| TAAGAGCCTATGTGATGTCA+GGG | 0.580638 | 3.2:+78603437 | MS.gene06551:CDS |
| ATAAAAGGTTCTGAGAGAAA+GGG | 0.581290 | 3.2:+78603526 | MS.gene06551:CDS |
| GCAGAGGTCACCGCGGCCGT+AGG | 0.586798 | 3.2:-78602141 | None:intergenic |
| TGATGAGATTGAGGATGAGG+AGG | 0.589562 | 3.2:+78605980 | MS.gene06551:CDS |
| TTAAATCAGTTCCTGTAAGG+GGG | 0.593454 | 3.2:-78603417 | None:intergenic |
| AAAGAGTACACGGTTGGTGG+GGG | 0.602508 | 3.2:+78605891 | MS.gene06551:CDS |
| AGATGTGTTAAGTCTTGTCA+TGG | 0.606087 | 3.2:-78603368 | None:intergenic |
| TCAAAGCCACCACTGAACCT+CGG | 0.609384 | 3.2:+78602090 | MS.gene06551:CDS |
| AGCCTCAAGTTGCAAAACCA+TGG | 0.612564 | 3.2:-78602184 | None:intergenic |
| AGAAGCCATGGGAACATCAA+CGG | 0.616261 | 3.2:-78605832 | None:intergenic |
| GAAGGTTCTGGAGAAACCTA+CGG | 0.620194 | 3.2:+78602125 | MS.gene06551:CDS |
| GTTGCAAAACCATGGCCTCA+CGG | 0.632840 | 3.2:-78602176 | None:intergenic |
| TGCTTTCACGCGGTACCGTG+AGG | 0.638373 | 3.2:+78602161 | MS.gene06551:CDS |
| TAAATCAGTTCCTGTAAGGG+GGG | 0.651045 | 3.2:-78603416 | None:intergenic |
| TGCCAAAAGAGAGCGTCAGG+AGG | 0.651941 | 3.2:+78606004 | MS.gene06551:CDS |
| AGACCCTGTGGTGAAAGCAA+TGG | 0.653556 | 3.2:+78605932 | MS.gene06551:CDS |
| GGTTGATTGTGTGCCTTGAG+CGG | 0.654227 | 3.2:-78603324 | None:intergenic |
| ATGTCAAGAACAAAATGCGG+TGG | 0.658750 | 3.2:+78601874 | MS.gene06551:CDS |
| ACGGTACCGCGTGAAAGCAG+AGG | 0.660527 | 3.2:-78602157 | None:intergenic |
| AAACGCCGATACGACTGGGA+GGG | 0.661669 | 3.2:-78602053 | None:intergenic |
| TTGAAACCGAGGTTCAGTGG+TGG | 0.661963 | 3.2:-78602096 | None:intergenic |
| AGAGCCTATGTGATGTCAGG+GGG | 0.670155 | 3.2:+78603439 | MS.gene06551:CDS |
| AAGAGCCTATGTGATGTCAG+GGG | 0.683418 | 3.2:+78603438 | MS.gene06551:CDS |
| CAAATGTCAAGAACAAAATG+CGG | 0.685833 | 3.2:+78601871 | MS.gene06551:CDS |
| CGGTGACCTCTGCTTTCACG+CGG | 0.689212 | 3.2:+78602151 | MS.gene06551:CDS |
| TTCCAATCAGATACAAACGC+TGG | 0.692801 | 3.2:-78605863 | None:intergenic |
| ATCTGATCTAAGAGACCCTG+TGG | 0.712384 | 3.2:+78605920 | MS.gene06551:CDS |
| AAAACGCCGATACGACTGGG+AGG | 0.714464 | 3.2:-78602054 | None:intergenic |
| CGTGAAAGCAGAGGTCACCG+CGG | 0.795470 | 3.2:-78602148 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTAATTTAACATTTTG+GGG | - | chr3.2:78605148-78605167 | None:intergenic | 10.0% |
| !!! | AGTAAATTTTGTAATTTTAT+TGG | + | chr3.2:78604896-78604915 | MS.gene06551:intron | 10.0% |
| !!! | ATATTATTAATTTTGTTAAG+TGG | - | chr3.2:78604875-78604894 | None:intergenic | 10.0% |
| !!! | TAAAAAACAAAATTTTAAAC+TGG | + | chr3.2:78604976-78604995 | MS.gene06551:intron | 10.0% |
| !!! | TTATTTTTAACATCTTTTAA+GGG | + | chr3.2:78603292-78603311 | MS.gene06551:intron | 10.0% |
| !!! | TTTATTTTTAACATCTTTTA+AGG | + | chr3.2:78603291-78603310 | MS.gene06551:intron | 10.0% |
| !! | AACTTTATTGTATGAATAAA+TGG | - | chr3.2:78604708-78604727 | None:intergenic | 15.0% |
| !!! | AATAGTGTTTTTTTTAGATT+GGG | + | chr3.2:78603179-78603198 | MS.gene06551:intron | 15.0% |
| !!! | GTTTTATGAATTGTATAAAT+AGG | + | chr3.2:78605344-78605363 | MS.gene06551:intron | 15.0% |
| !!! | TTTATGATTTTTTTTAAGTG+TGG | - | chr3.2:78604731-78604750 | None:intergenic | 15.0% |
| !! | AAAGATTTCATAAGTTATCT+CGG | + | chr3.2:78602641-78602660 | MS.gene06551:intron | 20.0% |
| !! | ATTAATGATATAAACAAGAG+GGG | - | chr3.2:78603600-78603619 | None:intergenic | 20.0% |
| !! | ATTGTATAAATAGGAAGTTA+TGG | + | chr3.2:78605353-78605372 | MS.gene06551:intron | 20.0% |
| !! | GATTAATGATATAAACAAGA+GGG | - | chr3.2:78603601-78603620 | None:intergenic | 20.0% |
| !! | GTAAAATCTATAGATTGATA+TGG | + | chr3.2:78604107-78604126 | MS.gene06551:intron | 20.0% |
| !! | TATGTATGTAATTATCCAAA+TGG | + | chr3.2:78603996-78604015 | MS.gene06551:intron | 20.0% |
| !! | TCATAATCTATAATCAAAAC+TGG | - | chr3.2:78602505-78602524 | None:intergenic | 20.0% |
| !! | TGTGATATAAGTTAAAACAT+AGG | + | chr3.2:78605644-78605663 | MS.gene06551:intron | 20.0% |
| !!! | CAATAGTGTTTTTTTTAGAT+TGG | + | chr3.2:78603178-78603197 | MS.gene06551:intron | 20.0% |
| !!! | CTGATGATATTTTAAGAATT+AGG | - | chr3.2:78603863-78603882 | None:intergenic | 20.0% |
| !!! | GTTAATTTGGAATAATGATA+GGG | + | chr3.2:78605393-78605412 | MS.gene06551:intron | 20.0% |
| !!! | TCTTATTTAAACTAATCTAC+TGG | - | chr3.2:78602764-78602783 | None:intergenic | 20.0% |
| ! | AAATAGGAAGTTATGGAAAA+GGG | + | chr3.2:78605360-78605379 | MS.gene06551:intron | 25.0% |
| ! | AAATGTTATAAAACTCAGAC+CGG | + | chr3.2:78604619-78604638 | MS.gene06551:intron | 25.0% |
| ! | AACTTAACAATGCTATATAC+TGG | + | chr3.2:78602541-78602560 | MS.gene06551:intron | 25.0% |
| ! | AGAAACTAAACCTCTAATAA+AGG | - | chr3.2:78604339-78604358 | None:intergenic | 25.0% |
| ! | AGCTCGGTAATTTATTATTA+AGG | + | chr3.2:78605247-78605266 | MS.gene06551:intron | 25.0% |
| ! | ATATTAGGTATGTTTCCATT+TGG | - | chr3.2:78604014-78604033 | None:intergenic | 25.0% |
| ! | ATCAAGATCATCAAATTCTT+TGG | - | chr3.2:78605964-78605983 | None:intergenic | 25.0% |
| ! | ATGAGAATTATGATTCTGTT+TGG | + | chr3.2:78602819-78602838 | MS.gene06551:intron | 25.0% |
| ! | CCATTCTATAAACTTTATCA+GGG | - | chr3.2:78603348-78603367 | None:intergenic | 25.0% |
| ! | CGATTAATGATATAAACAAG+AGG | - | chr3.2:78603602-78603621 | None:intergenic | 25.0% |
| ! | GATATAGTAAGCATTCAAAT+CGG | + | chr3.2:78603932-78603951 | MS.gene06551:intron | 25.0% |
| ! | TAAATAGGAAGTTATGGAAA+AGG | + | chr3.2:78605359-78605378 | MS.gene06551:intron | 25.0% |
| ! | TAAGACAAACAAATTCTATC+AGG | - | chr3.2:78603625-78603644 | None:intergenic | 25.0% |
| ! | TAGCTTATACATTATGTACA+AGG | - | chr3.2:78602922-78602941 | None:intergenic | 25.0% |
| ! | TAGTAGAATTTGATGCAAAA+TGG | - | chr3.2:78603693-78603712 | None:intergenic | 25.0% |
| ! | TCGGTAATTTATTATTAAGG+AGG | + | chr3.2:78605250-78605269 | MS.gene06551:intron | 25.0% |
| ! | TTGAATGCTTACTATATCTT+CGG | - | chr3.2:78603930-78603949 | None:intergenic | 25.0% |
| ! | TTTCAAAGAGCTTATGAAAA+CGG | - | chr3.2:78603060-78603079 | None:intergenic | 25.0% |
| !! | AGATTATATGTAGAGTGTTT+AGG | - | chr3.2:78605210-78605229 | None:intergenic | 25.0% |
| !! | AGCGTAATGCTTATATTTTA+AGG | + | chr3.2:78604284-78604303 | MS.gene06551:intron | 25.0% |
| !! | GGTTAATTTGGAATAATGAT+AGG | + | chr3.2:78605392-78605411 | MS.gene06551:intron | 25.0% |
| !! | TCTTATTTGAACTAATCTAC+TGG | - | chr3.2:78603103-78603122 | None:intergenic | 25.0% |
| !! | TGCAAAATTTTATGTGCATT+AGG | + | chr3.2:78602411-78602430 | MS.gene06551:intron | 25.0% |
| !! | TTATTGATTATGATCCTGTT+TGG | + | chr3.2:78602451-78602470 | MS.gene06551:intron | 25.0% |
| !!! | GTAATGCTTATATTTTAAGG+AGG | + | chr3.2:78604287-78604306 | MS.gene06551:intron | 25.0% |
| AATAAGCTGAAAACAGCTTA+TGG | + | chr3.2:78602676-78602695 | MS.gene06551:intron | 30.0% | |
| AGACCAAATGTATAGTGTTT+AGG | + | chr3.2:78605099-78605118 | MS.gene06551:intron | 30.0% | |
| AGCAATGAGTTAAATCTTGA+AGG | + | chr3.2:78604222-78604241 | MS.gene06551:intron | 30.0% | |
| AGCTAACAAATATCATGACA+TGG | - | chr3.2:78603747-78603766 | None:intergenic | 30.0% | |
| ATAGAGAATTAGAGATGGTT+TGG | - | chr3.2:78602791-78602810 | None:intergenic | 30.0% | |
| ATGTCATAGAGAATTAGAGA+TGG | - | chr3.2:78602796-78602815 | None:intergenic | 30.0% | |
| ATTAAGCTGTTTATCCAAAC+AGG | - | chr3.2:78602468-78602487 | None:intergenic | 30.0% | |
| ATTATCCAAATTGGAAAGGA+AGG | - | chr3.2:78602387-78602406 | None:intergenic | 30.0% | |
| CAAAATCATACAGATGAAGT+TGG | - | chr3.2:78603820-78603839 | None:intergenic | 30.0% | |
| CAAATGTCAAGAACAAAATG+CGG | + | chr3.2:78601871-78601890 | MS.gene06551:CDS | 30.0% | |
| CATAATTGTTCCTTAATGAG+AGG | - | chr3.2:78605290-78605309 | None:intergenic | 30.0% | |
| CCCTGATAAAGTTTATAGAA+TGG | + | chr3.2:78603345-78603364 | MS.gene06551:CDS | 30.0% | |
| GAATTAGGAAGACATAATTC+TGG | - | chr3.2:78603848-78603867 | None:intergenic | 30.0% | |
| GCCATTCTATAAACTTTATC+AGG | - | chr3.2:78603349-78603368 | None:intergenic | 30.0% | |
| GTTGAAGTCAAGAAAAAACA+GGG | + | chr3.2:78603559-78603578 | MS.gene06551:CDS | 30.0% | |
| TAAGAATCCTACCACAATAT+TGG | - | chr3.2:78605537-78605556 | None:intergenic | 30.0% | |
| TACCAATTCTTGTCATTCTA+AGG | + | chr3.2:78605460-78605479 | MS.gene06551:intron | 30.0% | |
| TACCTTAGAATGACAAGAAT+TGG | - | chr3.2:78605465-78605484 | None:intergenic | 30.0% | |
| TATCATGACATGGATAAAAC+AGG | - | chr3.2:78603737-78603756 | None:intergenic | 30.0% | |
| TCCAATTATCCAAATTGGAA+AGG | - | chr3.2:78602391-78602410 | None:intergenic | 30.0% | |
| TCCTTTCCAATTTGGATAAT+TGG | + | chr3.2:78602387-78602406 | MS.gene06551:intron | 30.0% | |
| TCTTAAATCAGTTCCTGTAA+GGG | - | chr3.2:78603422-78603441 | None:intergenic | 30.0% | |
| TCTTATTGTAGATTATGACC+CGG | + | chr3.2:78602872-78602891 | MS.gene06551:intron | 30.0% | |
| TGTACATTTCTTGTCTTCTA+GGG | - | chr3.2:78605727-78605746 | None:intergenic | 30.0% | |
| TGTTGAAGTCAAGAAAAAAC+AGG | + | chr3.2:78603558-78603577 | MS.gene06551:CDS | 30.0% | |
| TTATAGATTATGACCCTGTT+TGG | + | chr3.2:78602512-78602531 | MS.gene06551:intron | 30.0% | |
| TTCATTTCTGTAAACTCTCT+AGG | - | chr3.2:78603008-78603027 | None:intergenic | 30.0% | |
| TTGCATCCAATTATCCAAAT+TGG | - | chr3.2:78602396-78602415 | None:intergenic | 30.0% | |
| TTGTACATTTCTTGTCTTCT+AGG | - | chr3.2:78605728-78605747 | None:intergenic | 30.0% | |
| ! | AGGAATAACCTTTTTCTGTT+TGG | + | chr3.2:78602216-78602235 | MS.gene06551:CDS | 30.0% |
| ! | ATTCTTTGGAGGATTATGTT+TGG | + | chr3.2:78602264-78602283 | MS.gene06551:CDS | 30.0% |
| ! | ATTTGGAATAATGATAGGGA+AGG | + | chr3.2:78605397-78605416 | MS.gene06551:intron | 30.0% |
| ! | GCTTGATTTTCTTTAACGTA+AGG | - | chr3.2:78603468-78603487 | None:intergenic | 30.0% |
| ! | GGTTTAGTTTCTTTGATATC+AGG | + | chr3.2:78604347-78604366 | MS.gene06551:intron | 30.0% |
| ! | GTGAATTCTGCATTGATATA+TGG | + | chr3.2:78603252-78603271 | MS.gene06551:intron | 30.0% |
| ! | TGGAAATGAAAAAGAGTACA+CGG | + | chr3.2:78605881-78605900 | MS.gene06551:CDS | 30.0% |
| ! | TTAAGTTGCTTATCCAAACA+GGG | - | chr3.2:78602528-78602547 | None:intergenic | 30.0% |
| ! | TTGTTCTTTGTGCTATTCTT+TGG | + | chr3.2:78602250-78602269 | MS.gene06551:CDS | 30.0% |
| ! | TTTCTCATTTTCCCCATAAA+AGG | + | chr3.2:78603511-78603530 | MS.gene06551:CDS | 30.0% |
| ! | TTTCTCTCAGAACCTTTTAT+GGG | - | chr3.2:78603526-78603545 | None:intergenic | 30.0% |
| !! | ACATTTTCATTTGAGATACC+GGG | + | chr3.2:78604463-78604482 | MS.gene06551:intron | 30.0% |
| !! | ATAAAAGGTTCTGAGAGAAA+GGG | + | chr3.2:78603526-78603545 | MS.gene06551:CDS | 30.0% |
| !! | CACATTTTCATTTGAGATAC+CGG | + | chr3.2:78604462-78604481 | MS.gene06551:intron | 30.0% |
| !! | TATATACTGGTTCTGATCAT+AGG | + | chr3.2:78602554-78602573 | MS.gene06551:intron | 30.0% |
| !! | TTGAAAAAGTTGGCTTGATT+GGG | + | chr3.2:78604165-78604184 | MS.gene06551:intron | 30.0% |
| !! | TTTGAAAAAGTTGGCTTGAT+TGG | + | chr3.2:78604164-78604183 | MS.gene06551:intron | 30.0% |
| !!! | AATCAAGCCAACTTTTTCAA+AGG | - | chr3.2:78604165-78604184 | None:intergenic | 30.0% |
| !!! | ACTTTTGTTGTTCTTTCTGA+AGG | + | chr3.2:78602297-78602316 | MS.gene06551:CDS | 30.0% |
| !!! | CGGTATGAATTTTTAAAGTG+TGG | - | chr3.2:78604762-78604781 | None:intergenic | 30.0% |
| !!! | GTGTTTTTTTTAGATTGGGA+AGG | + | chr3.2:78603183-78603202 | MS.gene06551:intron | 30.0% |
| AAAATGTGAACTTCAGCACA+AGG | - | chr3.2:78604450-78604469 | None:intergenic | 35.0% | |
| AACTGATCTGAGTCACTATA+TGG | - | chr3.2:78605064-78605083 | None:intergenic | 35.0% | |
| AACTTATATCACACATGCAG+AGG | - | chr3.2:78605637-78605656 | None:intergenic | 35.0% | |
| AACTTGAGGCTTTCTTCAAA+AGG | + | chr3.2:78602196-78602215 | MS.gene06551:CDS | 35.0% | |
| AAGAAATGTACAATGCAGAG+GGG | + | chr3.2:78605735-78605754 | MS.gene06551:intron | 35.0% | |
| AAGCATTCAAATCGGAATAG+TGG | + | chr3.2:78603940-78603959 | MS.gene06551:intron | 35.0% | |
| AAGCATTCATATCTGGTGAA+TGG | + | chr3.2:78603789-78603808 | MS.gene06551:intron | 35.0% | |
| AAGGATGTTACTGGTATCTA+TGG | - | chr3.2:78605577-78605596 | None:intergenic | 35.0% | |
| AATGAACTGAAATCAGCTCA+TGG | + | chr3.2:78603022-78603041 | MS.gene06551:intron | 35.0% | |
| ACAAGAAATGTACAATGCAG+AGG | + | chr3.2:78605733-78605752 | MS.gene06551:intron | 35.0% | |
| ACAATAGTTGGGTCATAACA+TGG | - | chr3.2:78604529-78604548 | None:intergenic | 35.0% | |
| ACTGATCTGAGTCACTATAT+GGG | - | chr3.2:78605063-78605082 | None:intergenic | 35.0% | |
| AGAAAATCAAGCCAAGTCTT+AGG | + | chr3.2:78603476-78603495 | MS.gene06551:CDS | 35.0% | |
| ATGAACTGAAATCAGCTCAT+GGG | + | chr3.2:78603023-78603042 | MS.gene06551:intron | 35.0% | |
| CAAAAGCCTCAATGAACATA+CGG | - | chr3.2:78604503-78604522 | None:intergenic | 35.0% | |
| CAAGAAATGTACAATGCAGA+GGG | + | chr3.2:78605734-78605753 | MS.gene06551:intron | 35.0% | |
| CAGTGAAAACTAGTTAGACT+CGG | - | chr3.2:78605022-78605041 | None:intergenic | 35.0% | |
| CATCAGATTGTCTTTAGTCT+AGG | + | chr3.2:78603877-78603896 | MS.gene06551:intron | 35.0% | |
| CTCTTAAATCAGTTCCTGTA+AGG | - | chr3.2:78603423-78603442 | None:intergenic | 35.0% | |
| CTTAAATCAGTTCCTGTAAG+GGG | - | chr3.2:78603421-78603440 | None:intergenic | 35.0% | |
| CTTCCAAGAAATCAAACTTC+GGG | - | chr3.2:78603772-78603791 | None:intergenic | 35.0% | |
| GCTCAGATTCTTGAAGTTAT+GGG | + | chr3.2:78603391-78603410 | MS.gene06551:CDS | 35.0% | |
| GCTTCCAAGAAATCAAACTT+CGG | - | chr3.2:78603773-78603792 | None:intergenic | 35.0% | |
| GGAAATTACAAGGAATATGG+AGG | - | chr3.2:78605602-78605621 | None:intergenic | 35.0% | |
| GGAGGAAATTACAAGGAATA+TGG | - | chr3.2:78605605-78605624 | None:intergenic | 35.0% | |
| GTACTATGTCAATGGATCAT+TGG | + | chr3.2:78604659-78604678 | MS.gene06551:intron | 35.0% | |
| GTGCCTAAACACTATACATT+TGG | - | chr3.2:78605105-78605124 | None:intergenic | 35.0% | |
| GTTGAGAAGGTTGAAAATAG+TGG | + | chr3.2:78606050-78606069 | MS.gene06551:CDS | 35.0% | |
| TACAAGGAATATGGAGGATA+AGG | - | chr3.2:78605596-78605615 | None:intergenic | 35.0% | |
| TATGAACATCTACTGAAGCA+CGG | - | chr3.2:78604782-78604801 | None:intergenic | 35.0% | |
| TGATGATCTTGATGAGATTG+AGG | + | chr3.2:78605971-78605990 | MS.gene06551:CDS | 35.0% | |
| TGCTCAGATTCTTGAAGTTA+TGG | + | chr3.2:78603390-78603409 | MS.gene06551:CDS | 35.0% | |
| TGTCTTTAGTCTAGGAATAG+TGG | + | chr3.2:78603885-78603904 | MS.gene06551:intron | 35.0% | |
| TGTTATGACCCAACTATTGT+TGG | + | chr3.2:78604529-78604548 | MS.gene06551:intron | 35.0% | |
| TTAAATCAGTTCCTGTAAGG+GGG | - | chr3.2:78603420-78603439 | None:intergenic | 35.0% | |
| TTAAGGAGGATTCCTTTGTT+AGG | + | chr3.2:78605264-78605283 | MS.gene06551:intron | 35.0% | |
| TTTAGTCTAGGAATAGTGGT+GGG | + | chr3.2:78603889-78603908 | MS.gene06551:intron | 35.0% | |
| TTTCATAAGTTATCTCGGAG+AGG | + | chr3.2:78602646-78602665 | MS.gene06551:intron | 35.0% | |
| TTTCCTCGTTGTGTAATTCA+AGG | - | chr3.2:78604602-78604621 | None:intergenic | 35.0% | |
| TTTCCTTGAATTACACAACG+AGG | + | chr3.2:78604596-78604615 | MS.gene06551:intron | 35.0% | |
| ! | AATGAAAAAGAGTACACGGT+TGG | + | chr3.2:78605885-78605904 | MS.gene06551:CDS | 35.0% |
| ! | AGATGTGTTAAGTCTTGTCA+TGG | - | chr3.2:78603371-78603390 | None:intergenic | 35.0% |
| ! | AGGAAGACATAATTCTGGAA+AGG | - | chr3.2:78603843-78603862 | None:intergenic | 35.0% |
| ! | ATTAAGTTGCTTATCCCAAC+CGG | - | chr3.2:78602894-78602913 | None:intergenic | 35.0% |
| ! | CGCTTGTGCTTTTATATACA+TGG | - | chr3.2:78604047-78604066 | None:intergenic | 35.0% |
| ! | CTTTCTCTCAGAACCTTTTA+TGG | - | chr3.2:78603527-78603546 | None:intergenic | 35.0% |
| ! | GATGCTTCCTTTGAAAAAGT+TGG | + | chr3.2:78604155-78604174 | MS.gene06551:intron | 35.0% |
| ! | GTAAAACCGCCCTTTAAAAA+TGG | - | chr3.2:78604073-78604092 | None:intergenic | 35.0% |
| ! | GTTAAGTTGCTTATCCAAAC+AGG | - | chr3.2:78602529-78602548 | None:intergenic | 35.0% |
| ! | GTTACTTTGGACTTGAAACA+TGG | + | chr3.2:78604399-78604418 | MS.gene06551:intron | 35.0% |
| ! | TTCCTTTTGGCACATTTCAT+TGG | + | chr3.2:78604261-78604280 | MS.gene06551:intron | 35.0% |
| ! | TTCTCTCAGAACCTTTTATG+GGG | - | chr3.2:78603525-78603544 | None:intergenic | 35.0% |
| ! | TTCTTTGTGCTATTCTTTGG+AGG | + | chr3.2:78602253-78602272 | MS.gene06551:CDS | 35.0% |
| !! | AATTTTGAAGAGTGGTGAAG+TGG | - | chr3.2:78601970-78601989 | None:intergenic | 35.0% |
| !! | ATTTTCATTTGAGATACCGG+GGG | + | chr3.2:78604465-78604484 | MS.gene06551:intron | 35.0% |
| !! | CATAAAAGGTTCTGAGAGAA+AGG | + | chr3.2:78603525-78603544 | MS.gene06551:CDS | 35.0% |
| !! | CATTTTCATTTGAGATACCG+GGG | + | chr3.2:78604464-78604483 | MS.gene06551:intron | 35.0% |
| !! | GTCATTCTAAGGTATTGTAC+TGG | + | chr3.2:78605471-78605490 | MS.gene06551:intron | 35.0% |
| !! | TGGGTAGTAATTTTGAAGAG+TGG | - | chr3.2:78601978-78601997 | None:intergenic | 35.0% |
| !! | TTCTTGGAAGCATTCATATC+TGG | + | chr3.2:78603782-78603801 | MS.gene06551:intron | 35.0% |
| AAGACTCTCGAATTCTTGGA+GGG | + | chr3.2:78605428-78605447 | MS.gene06551:intron | 40.0% | |
| AAGCAACAATAGCAGCAGAA+AGG | - | chr3.2:78602347-78602366 | None:intergenic | 40.0% | |
| AGCAACAATAGCAGCAGAAA+GGG | - | chr3.2:78602346-78602365 | None:intergenic | 40.0% | |
| AGGAAGTTATGGAAAAGGGA+GGG | + | chr3.2:78605364-78605383 | MS.gene06551:intron | 40.0% | |
| AGTCAAGAAAAAACAGGGCA+AGG | + | chr3.2:78603564-78603583 | MS.gene06551:CDS | 40.0% | |
| ATCCAAGACTCTCGAATTCT+TGG | + | chr3.2:78605424-78605443 | MS.gene06551:intron | 40.0% | |
| ATGACCCAACTATTGTTGGT+TGG | + | chr3.2:78604533-78604552 | MS.gene06551:intron | 40.0% | |
| ATGGAGGATAAGGATGTTAC+TGG | - | chr3.2:78605586-78605605 | None:intergenic | 40.0% | |
| ATGTCAAGAACAAAATGCGG+TGG | + | chr3.2:78601874-78601893 | MS.gene06551:CDS | 40.0% | |
| ATTGTAGATTATGACCCGGT+TGG | + | chr3.2:78602876-78602895 | MS.gene06551:intron | 40.0% | |
| CAAATAAGACTCCAAACCAG+CGG | + | chr3.2:78603114-78603133 | MS.gene06551:intron | 40.0% | |
| CATGGTCAGAGCATGATATT+AGG | - | chr3.2:78604029-78604048 | None:intergenic | 40.0% | |
| CCAAATTGGAAAGGAAGGAA+AGG | - | chr3.2:78602382-78602401 | None:intergenic | 40.0% | |
| CCTTTCCTTCCTTTCCAATT+TGG | + | chr3.2:78602379-78602398 | MS.gene06551:intron | 40.0% | |
| CTCCAATGAAATGTGCCAAA+AGG | - | chr3.2:78604266-78604285 | None:intergenic | 40.0% | |
| CTTAATGAGAGGCCTAACAA+AGG | - | chr3.2:78605279-78605298 | None:intergenic | 40.0% | |
| CTTCTGCTGTTCCAATATTG+TGG | + | chr3.2:78605523-78605542 | MS.gene06551:intron | 40.0% | |
| CTTTAGTCTAGGAATAGTGG+TGG | + | chr3.2:78603888-78603907 | MS.gene06551:intron | 40.0% | |
| CTTTGTTAGGCCTCTCATTA+AGG | + | chr3.2:78605277-78605296 | MS.gene06551:intron | 40.0% | |
| GAAATGTGCCAAAAGGAACA+TGG | - | chr3.2:78604259-78604278 | None:intergenic | 40.0% | |
| GAGGGGAAATTTATGCTTCA+AGG | + | chr3.2:78605752-78605771 | MS.gene06551:intron | 40.0% | |
| GATGCTTGCACAAGTTACTT+TGG | + | chr3.2:78604386-78604405 | MS.gene06551:intron | 40.0% | |
| GCTTCCAACCAACAATAGTT+GGG | - | chr3.2:78604540-78604559 | None:intergenic | 40.0% | |
| GTGAACATAGAAGAGTAGCT+CGG | + | chr3.2:78605231-78605250 | MS.gene06551:intron | 40.0% | |
| GTTTAGGCACACATACAATG+AGG | + | chr3.2:78605115-78605134 | MS.gene06551:intron | 40.0% | |
| TAAATCAGTTCCTGTAAGGG+GGG | - | chr3.2:78603419-78603438 | None:intergenic | 40.0% | |
| TAAGAGCCTATGTGATGTCA+GGG | + | chr3.2:78603437-78603456 | MS.gene06551:CDS | 40.0% | |
| TAGGAAGTTATGGAAAAGGG+AGG | + | chr3.2:78605363-78605382 | MS.gene06551:intron | 40.0% | |
| TCATAGGTTATGACGCTGTT+TGG | + | chr3.2:78602570-78602589 | MS.gene06551:intron | 40.0% | |
| TCTTCACCGTATGTTCATTG+AGG | + | chr3.2:78604494-78604513 | MS.gene06551:intron | 40.0% | |
| TCTTGATGAGATTGAGGATG+AGG | + | chr3.2:78605977-78605996 | MS.gene06551:CDS | 40.0% | |
| TGAAAACTAGTTAGACTCGG+TGG | - | chr3.2:78605019-78605038 | None:intergenic | 40.0% | |
| TGCTGTTCCAATATTGTGGT+AGG | + | chr3.2:78605527-78605546 | MS.gene06551:intron | 40.0% | |
| TGCTTCCAACCAACAATAGT+TGG | - | chr3.2:78604541-78604560 | None:intergenic | 40.0% | |
| TTAAGAGCCTATGTGATGTC+AGG | + | chr3.2:78603436-78603455 | MS.gene06551:CDS | 40.0% | |
| TTGTAGATTATGACCCGGTT+GGG | + | chr3.2:78602877-78602896 | MS.gene06551:intron | 40.0% | |
| ! | AAAAAGAGTACACGGTTGGT+GGG | + | chr3.2:78605889-78605908 | MS.gene06551:CDS | 40.0% |
| ! | AAGGAAGAGAGGATGGATTT+AGG | - | chr3.2:78602009-78602028 | None:intergenic | 40.0% |
| ! | AGGAAGAGAGGATGGATTTA+GGG | - | chr3.2:78602008-78602027 | None:intergenic | 40.0% |
| ! | TAAGCCATCCATGTTCCTTT+TGG | + | chr3.2:78604248-78604267 | MS.gene06551:intron | 40.0% |
| ! | TAGCCCGAAGTTTGATTTCT+TGG | + | chr3.2:78603766-78603785 | MS.gene06551:intron | 40.0% |
| ! | TGTTGTTCTTTCTGAAGGCA+TGG | + | chr3.2:78602302-78602321 | MS.gene06551:CDS | 40.0% |
| ! | TTAAGTTGCTTATCCCAACC+GGG | - | chr3.2:78602893-78602912 | None:intergenic | 40.0% |
| ! | TTGTGACTTGTGAGACTGTT+TGG | - | chr3.2:78602732-78602751 | None:intergenic | 40.0% |
| !! | AAAAAGTTGGCTTGATTGGG+TGG | + | chr3.2:78604168-78604187 | MS.gene06551:intron | 40.0% |
| !! | AAAAGTTGGCTTGATTGGGT+GGG | + | chr3.2:78604169-78604188 | MS.gene06551:intron | 40.0% |
| !! | ACAAGCGCGTCCATTTTTAA+AGG | + | chr3.2:78604060-78604079 | MS.gene06551:intron | 40.0% |
| !! | CAAGCGCGTCCATTTTTAAA+GGG | + | chr3.2:78604061-78604080 | MS.gene06551:intron | 40.0% |
| !! | TCTAAGGTATTGTACTGGTG+TGG | + | chr3.2:78605476-78605495 | MS.gene06551:intron | 40.0% |
| !! | TTCAAATCGGAATAGTGGAC+TGG | + | chr3.2:78603945-78603964 | MS.gene06551:intron | 40.0% |
| !! | TTTTCATTTGAGATACCGGG+GGG | + | chr3.2:78604466-78604485 | MS.gene06551:intron | 40.0% |
| !!! | CGAGTCTAACTAGTTTTCAC+TGG | + | chr3.2:78605020-78605039 | MS.gene06551:intron | 40.0% |
| !!! | TTTTTCTGTTTGGTGCTGCT+GGG | + | chr3.2:78602226-78602245 | MS.gene06551:CDS | 40.0% |
| AAAATGGAAAGACGACGCTG+AGG | - | chr3.2:78603677-78603696 | None:intergenic | 45.0% | |
| AAGAGCCTATGTGATGTCAG+GGG | + | chr3.2:78603438-78603457 | MS.gene06551:CDS | 45.0% | |
| AAGTTATCTCGGAGAGGTTG+TGG | + | chr3.2:78602652-78602671 | MS.gene06551:intron | 45.0% | |
| ACAAATAGTCATACAGCCGC+TGG | - | chr3.2:78603133-78603152 | None:intergenic | 45.0% | |
| ACAGAATGTCCATGCCTACA+AGG | + | chr3.2:78604424-78604443 | MS.gene06551:intron | 45.0% | |
| AGAAGCCATGGGAACATCAA+CGG | - | chr3.2:78605835-78605854 | None:intergenic | 45.0% | |
| AGGGTTTGTATATCCGCTCA+AGG | + | chr3.2:78603311-78603330 | MS.gene06551:intron | 45.0% | |
| AGGTTTCTCCAGAACCTTCT+TGG | - | chr3.2:78602124-78602143 | None:intergenic | 45.0% | |
| ATCTGATCTAAGAGACCCTG+TGG | + | chr3.2:78605920-78605939 | MS.gene06551:CDS | 45.0% | |
| CAACGTTTGCTCCTAAGACT+TGG | - | chr3.2:78603490-78603509 | None:intergenic | 45.0% | |
| CAAGACTCTCGAATTCTTGG+AGG | + | chr3.2:78605427-78605446 | MS.gene06551:intron | 45.0% | |
| CAGCAGCACCAAACAGAAAA+AGG | - | chr3.2:78602227-78602246 | None:intergenic | 45.0% | |
| CTCCAAGAATTCGAGAGTCT+TGG | - | chr3.2:78605429-78605448 | None:intergenic | 45.0% | |
| GAGAGGAGGAGGAAATTACA+AGG | - | chr3.2:78605612-78605631 | None:intergenic | 45.0% | |
| GCATCGAGAAGAAGTTGAGA+AGG | + | chr3.2:78606037-78606056 | MS.gene06551:CDS | 45.0% | |
| GCTGACAAGGCCTTTATTAG+AGG | + | chr3.2:78604326-78604345 | MS.gene06551:intron | 45.0% | |
| TATGGAAAAGGGAGGGAAGT+TGG | + | chr3.2:78605371-78605390 | MS.gene06551:intron | 45.0% | |
| TGATGAGATTGAGGATGAGG+AGG | + | chr3.2:78605980-78605999 | MS.gene06551:CDS | 45.0% | |
| TGTGCCAAAAGGAACATGGA+TGG | - | chr3.2:78604255-78604274 | None:intergenic | 45.0% | |
| TTTCAAGGCCAAGAAGGTTC+TGG | + | chr3.2:78602113-78602132 | MS.gene06551:CDS | 45.0% | |
| TTTGAAGAGTGGTGAAGTGG+AGG | - | chr3.2:78601967-78601986 | None:intergenic | 45.0% | |
| ! | AAAAGAGTACACGGTTGGTG+GGG | + | chr3.2:78605890-78605909 | MS.gene06551:CDS | 45.0% |
| ! | AAGAGAGGATGGATTTAGGG+TGG | - | chr3.2:78602005-78602024 | None:intergenic | 45.0% |
| ! | AGAGAGGATGGATTTAGGGT+GGG | - | chr3.2:78602004-78602023 | None:intergenic | 45.0% |
| ! | AGCCTCAAGTTGCAAAACCA+TGG | - | chr3.2:78602187-78602206 | None:intergenic | 45.0% |
| ! | GAAAAAGAGTACACGGTTGG+TGG | + | chr3.2:78605888-78605907 | MS.gene06551:CDS | 45.0% |
| ! | GGGAGGGAAGTTGGTTAATT+TGG | + | chr3.2:78605380-78605399 | MS.gene06551:intron | 45.0% |
| ! | TCTGAAGGCATGGCTAAGTA+TGG | + | chr3.2:78602312-78602331 | MS.gene06551:CDS | 45.0% |
| ! | TTTCATTTGAGATACCGGGG+GGG | + | chr3.2:78604467-78604486 | MS.gene06551:intron | 45.0% |
| !! | AAAGTTGGCTTGATTGGGTG+GGG | + | chr3.2:78604170-78604189 | MS.gene06551:intron | 45.0% |
| !! | GAAGGTTCTGGAGAAACCTA+CGG | + | chr3.2:78602125-78602144 | MS.gene06551:CDS | 45.0% |
| !! | TGGTGAGGGTACTATGTCAA+TGG | + | chr3.2:78604651-78604670 | MS.gene06551:intron | 45.0% |
| !!! | CTTTTTCTGTTTGGTGCTGC+TGG | + | chr3.2:78602225-78602244 | MS.gene06551:CDS | 45.0% |
| !!! | GTTAGACTCGGTGGATTTTG+TGG | - | chr3.2:78605010-78605029 | None:intergenic | 45.0% |
| !!! | TTTTCTGTTTGGTGCTGCTG+GGG | + | chr3.2:78602227-78602246 | MS.gene06551:CDS | 45.0% |
| !!! | ATAAAATTAATTTAACATTT+TGG | - | chr3.2:78605150-78605169 | None:intergenic | 5.0% |
| !!! | TAAAATTAATTTAACATTTT+GGG | - | chr3.2:78605149-78605168 | None:intergenic | 5.0% |
| AAGAGTGGTGAAGTGGAGGA+GGG | - | chr3.2:78601963-78601982 | None:intergenic | 50.0% | |
| AATTGGGGGTGAATGGAGGA+AGG | - | chr3.2:78602028-78602047 | None:intergenic | 50.0% | |
| ACCACTGAACCTCGGTTTCA+AGG | + | chr3.2:78602098-78602117 | MS.gene06551:CDS | 50.0% | |
| ACCCTCACCAAATCGTTGTC+CGG | - | chr3.2:78604641-78604660 | None:intergenic | 50.0% | |
| ACTCAGACCGGACAACGATT+TGG | + | chr3.2:78604631-78604650 | MS.gene06551:intron | 50.0% | |
| ACTGGGAGGGTGGAAAATTG+GGG | - | chr3.2:78602043-78602062 | None:intergenic | 50.0% | |
| AGACCCTGTGGTGAAAGCAA+TGG | + | chr3.2:78605932-78605951 | MS.gene06551:CDS | 50.0% | |
| AGAGCCTATGTGATGTCAGG+GGG | + | chr3.2:78603439-78603458 | MS.gene06551:CDS | 50.0% | |
| ATGGAGGAAGGAAGAGAGGA+TGG | - | chr3.2:78602016-78602035 | None:intergenic | 50.0% | |
| CCTTGTCAGCAGCAATGACA+GGG | - | chr3.2:78604316-78604335 | None:intergenic | 50.0% | |
| CTGAAAACGCCGATACGACT+GGG | - | chr3.2:78602060-78602079 | None:intergenic | 50.0% | |
| CTGCCATTGCTTTCACCACA+GGG | - | chr3.2:78605938-78605957 | None:intergenic | 50.0% | |
| GACTGGGAGGGTGGAAAATT+GGG | - | chr3.2:78602044-78602063 | None:intergenic | 50.0% | |
| GGAAAATTGGGGGTGAATGG+AGG | - | chr3.2:78602032-78602051 | None:intergenic | 50.0% | |
| GGTGGAAAATTGGGGGTGAA+TGG | - | chr3.2:78602035-78602054 | None:intergenic | 50.0% | |
| GGTTGATTGTGTGCCTTGAG+CGG | - | chr3.2:78603327-78603346 | None:intergenic | 50.0% | |
| GTGAATGGAGGAAGGAAGAG+AGG | - | chr3.2:78602020-78602039 | None:intergenic | 50.0% | |
| GTTGATGTTCCCATGGCTTC+TGG | + | chr3.2:78605834-78605853 | MS.gene06551:CDS | 50.0% | |
| GTTGCAAAACCATGGCCTCA+CGG | - | chr3.2:78602179-78602198 | None:intergenic | 50.0% | |
| TCAAAGCCACCACTGAACCT+CGG | + | chr3.2:78602090-78602109 | MS.gene06551:CDS | 50.0% | |
| TCACACATGCAGAGGAAGAG+AGG | - | chr3.2:78605629-78605648 | None:intergenic | 50.0% | |
| TCTGAAAACGCCGATACGAC+TGG | - | chr3.2:78602061-78602080 | None:intergenic | 50.0% | |
| TTGAAACCGAGGTTCAGTGG+TGG | - | chr3.2:78602099-78602118 | None:intergenic | 50.0% | |
| ! | AACCTCCTGACGCTCTCTTT+TGG | - | chr3.2:78606009-78606028 | None:intergenic | 50.0% |
| ! | ACTTCAGCACAAGGCCTTGT+AGG | - | chr3.2:78604441-78604460 | None:intergenic | 50.0% |
| ! | ATGGATTTAGGGTGGGGTGT+GGG | - | chr3.2:78601997-78602016 | None:intergenic | 50.0% |
| ! | GAGAGGATGGATTTAGGGTG+GGG | - | chr3.2:78602003-78602022 | None:intergenic | 50.0% |
| ! | TAGTCATACAGCCGCTGGTT+TGG | - | chr3.2:78603128-78603147 | None:intergenic | 50.0% |
| ! | TTCATTTGAGATACCGGGGG+GGG | + | chr3.2:78604468-78604487 | MS.gene06551:intron | 50.0% |
| !! | AAAGAGTACACGGTTGGTGG+GGG | + | chr3.2:78605891-78605910 | MS.gene06551:CDS | 50.0% |
| !! | ACCGGACAACGATTTGGTGA+GGG | + | chr3.2:78604637-78604656 | MS.gene06551:intron | 50.0% |
| !! | GAGGAAGAGTTGGTGGAGTT+GGG | - | chr3.2:78601917-78601936 | None:intergenic | 50.0% |
| !! | GCGCGTCCATTTTTAAAGGG+CGG | + | chr3.2:78604064-78604083 | MS.gene06551:intron | 50.0% |
| !! | GGCCATGGTTTTGCAACTTG+AGG | + | chr3.2:78602182-78602201 | MS.gene06551:CDS | 50.0% |
| AAAACGCCGATACGACTGGG+AGG | - | chr3.2:78602057-78602076 | None:intergenic | 55.0% | |
| AAACGCCGATACGACTGGGA+GGG | - | chr3.2:78602056-78602075 | None:intergenic | 55.0% | |
| AGAGTGGTGAAGTGGAGGAG+GGG | - | chr3.2:78601962-78601981 | None:intergenic | 55.0% | |
| ATGCAGAGGAAGAGAGGAGG+AGG | - | chr3.2:78605623-78605642 | None:intergenic | 55.0% | |
| CACATGCAGAGGAAGAGAGG+AGG | - | chr3.2:78605626-78605645 | None:intergenic | 55.0% | |
| CCCTGTCATTGCTGCTGACA+AGG | + | chr3.2:78604313-78604332 | MS.gene06551:intron | 55.0% | |
| CCTCGGTTTCAAGGCCAAGA+AGG | + | chr3.2:78602107-78602126 | MS.gene06551:CDS | 55.0% | |
| CGACTGGGAGGGTGGAAAAT+TGG | - | chr3.2:78602045-78602064 | None:intergenic | 55.0% | |
| CTGGGAGGGTGGAAAATTGG+GGG | - | chr3.2:78602042-78602061 | None:intergenic | 55.0% | |
| GAAGAGTGGTGAAGTGGAGG+AGG | - | chr3.2:78601964-78601983 | None:intergenic | 55.0% | |
| GCCTTGAAACCGAGGTTCAG+TGG | - | chr3.2:78602102-78602121 | None:intergenic | 55.0% | |
| GCCTTGTCAGCAGCAATGAC+AGG | - | chr3.2:78604317-78604336 | None:intergenic | 55.0% | |
| GCTAGCCGTTGATGTTCCCA+TGG | + | chr3.2:78605827-78605846 | MS.gene06551:CDS | 55.0% | |
| GCTGCCATTGCTTTCACCAC+AGG | - | chr3.2:78605939-78605958 | None:intergenic | 55.0% | |
| TTCCACCCTCCCAGTCGTAT+CGG | + | chr3.2:78602048-78602067 | MS.gene06551:CDS | 55.0% | |
| ! | AGCACAAGGCCTTGTAGGCA+TGG | - | chr3.2:78604436-78604455 | None:intergenic | 55.0% |
| ! | GATGGATTTAGGGTGGGGTG+TGG | - | chr3.2:78601998-78602017 | None:intergenic | 55.0% |
| ! | TCATTTGAGATACCGGGGGG+GGG | + | chr3.2:78604469-78604488 | MS.gene06551:intron | 55.0% |
| !! | CCTTCTTGGCCTTGAAACCG+AGG | - | chr3.2:78602110-78602129 | None:intergenic | 55.0% |
| !! | GACCGGACAACGATTTGGTG+AGG | + | chr3.2:78604636-78604655 | MS.gene06551:intron | 55.0% |
| !! | GGAGGAAGAGTTGGTGGAGT+TGG | - | chr3.2:78601918-78601937 | None:intergenic | 55.0% |
| !! | GGATGCCAAAAGAGAGCGTC+AGG | + | chr3.2:78606001-78606020 | MS.gene06551:CDS | 55.0% |
| !! | TGCCAAAAGAGAGCGTCAGG+AGG | + | chr3.2:78606004-78606023 | MS.gene06551:CDS | 55.0% |
| ACGGTACCGCGTGAAAGCAG+AGG | - | chr3.2:78602160-78602179 | None:intergenic | 60.0% | |
| CGGTGACCTCTGCTTTCACG+CGG | + | chr3.2:78602151-78602170 | MS.gene06551:CDS | 60.0% | |
| CGTGAAAGCAGAGGTCACCG+CGG | - | chr3.2:78602151-78602170 | None:intergenic | 60.0% | |
| GAGTGGTGAAGTGGAGGAGG+GGG | - | chr3.2:78601961-78601980 | None:intergenic | 60.0% | |
| GCCACCCCCTGACATCACAT+AGG | - | chr3.2:78603446-78603465 | None:intergenic | 60.0% | |
| GCCTATGTGATGTCAGGGGG+TGG | + | chr3.2:78603442-78603461 | MS.gene06551:CDS | 60.0% | |
| GTGCGGAAGTGAAAGGGTGG+CGG | - | chr3.2:78601939-78601958 | None:intergenic | 60.0% | |
| TCTGGAGAAACCTACGGCCG+CGG | + | chr3.2:78602131-78602150 | MS.gene06551:CDS | 60.0% | |
| TGCTTTCACGCGGTACCGTG+AGG | + | chr3.2:78602161-78602180 | MS.gene06551:CDS | 60.0% | |
| TGGTCTGGGCCAGAAGCCAT+GGG | - | chr3.2:78605846-78605865 | None:intergenic | 60.0% | |
| ! | GAGGGGGTGCGGAAGTGAAA+GGG | - | chr3.2:78601945-78601964 | None:intergenic | 60.0% |
| !! | AAGGGTGGCGGAGGAAGAGT+TGG | - | chr3.2:78601927-78601946 | None:intergenic | 60.0% |
| CTGGTCTGGGCCAGAAGCCA+TGG | - | chr3.2:78605847-78605866 | None:intergenic | 65.0% | |
| GGGGTGCGGAAGTGAAAGGG+TGG | - | chr3.2:78601942-78601961 | None:intergenic | 65.0% | |
| GTGAAGTGGAGGAGGGGGTG+CGG | - | chr3.2:78601956-78601975 | None:intergenic | 65.0% | |
| GTTATGGGCGCCCCCCTTAC+AGG | + | chr3.2:78603406-78603425 | MS.gene06551:CDS | 65.0% | |
| ! | CGGAAGTGAAAGGGTGGCGG+AGG | - | chr3.2:78601936-78601955 | None:intergenic | 65.0% |
| ! | GGAGGGGGTGCGGAAGTGAA+AGG | - | chr3.2:78601946-78601965 | None:intergenic | 65.0% |
| !! | GGTGGCGGAGGAAGAGTTGG+TGG | - | chr3.2:78601924-78601943 | None:intergenic | 65.0% |
| ACGGTGAAGAGTCCCCCCCC+CGG | - | chr3.2:78604484-78604503 | None:intergenic | 70.0% | |
| CACGCGGTACCGTGAGGCCA+TGG | + | chr3.2:78602167-78602186 | MS.gene06551:CDS | 70.0% | |
| CGCCGATACGACTGGGAGGG+TGG | - | chr3.2:78602053-78602072 | None:intergenic | 70.0% | |
| GCAGAGGTCACCGCGGCCGT+AGG | - | chr3.2:78602144-78602163 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 78601868 | 78606085 | 78601868 | ID=MS.gene06551 |
| chr3.2 | mRNA | 78601868 | 78606085 | 78601868 | ID=MS.gene06551.t1;Parent=MS.gene06551 |
| chr3.2 | exon | 78601868 | 78602371 | 78601868 | ID=MS.gene06551.t1.exon1;Parent=MS.gene06551.t1 |
| chr3.2 | CDS | 78601868 | 78602371 | 78601868 | ID=cds.MS.gene06551.t1;Parent=MS.gene06551.t1 |
| chr3.2 | exon | 78603313 | 78603585 | 78603313 | ID=MS.gene06551.t1.exon2;Parent=MS.gene06551.t1 |
| chr3.2 | CDS | 78603313 | 78603585 | 78603313 | ID=cds.MS.gene06551.t1;Parent=MS.gene06551.t1 |
| chr3.2 | exon | 78605813 | 78606085 | 78605813 | ID=MS.gene06551.t1.exon3;Parent=MS.gene06551.t1 |
| chr3.2 | CDS | 78605813 | 78606085 | 78605813 | ID=cds.MS.gene06551.t1;Parent=MS.gene06551.t1 |
| Gene Sequence |
| Protein sequence |
