Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52592.t1 | XP_003624197.1 | 83.8 | 277 | 43 | 1 | 1 | 277 | 1 | 275 | 3.30E-106 | 394.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52592.t1 | Q42533 | 56.9 | 239 | 88 | 4 | 49 | 277 | 46 | 279 | 4.2e-46 | 186.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52592.t1 | G7KRK6 | 83.8 | 277 | 43 | 1 | 1 | 277 | 1 | 275 | 2.4e-106 | 394.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049385 | MS.gene52592 | 0.811537 | 6.66E-51 | -1.69E-46 |
| MS.gene049419 | MS.gene52592 | 0.876388 | 1.45E-68 | -1.69E-46 |
| MS.gene049983 | MS.gene52592 | -0.806943 | 6.44E-50 | -1.69E-46 |
| MS.gene051848 | MS.gene52592 | 0.804332 | 2.27E-49 | -1.69E-46 |
| MS.gene052674 | MS.gene52592 | -0.80683 | 6.80E-50 | -1.69E-46 |
| MS.gene052675 | MS.gene52592 | -0.808668 | 2.77E-50 | -1.69E-46 |
| MS.gene052677 | MS.gene52592 | -0.806384 | 8.45E-50 | -1.69E-46 |
| MS.gene053272 | MS.gene52592 | 0.817622 | 3.00E-52 | -1.69E-46 |
| MS.gene056699 | MS.gene52592 | -0.827063 | 1.92E-54 | -1.69E-46 |
| MS.gene058708 | MS.gene52592 | 0.80691 | 6.54E-50 | -1.69E-46 |
| MS.gene059338 | MS.gene52592 | 0.83358 | 4.91E-56 | -1.69E-46 |
| MS.gene05985 | MS.gene52592 | 0.817215 | 3.70E-52 | -1.69E-46 |
| MS.gene060932 | MS.gene52592 | -0.830804 | 2.39E-55 | -1.69E-46 |
| MS.gene060935 | MS.gene52592 | -0.803591 | 3.24E-49 | -1.69E-46 |
| MS.gene060937 | MS.gene52592 | -0.809534 | 1.80E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52592.t1 | MTR_7g080290 | 96.390 | 277 | 8 | 1 | 1 | 277 | 1 | 275 | 0.0 | 523 |
| MS.gene52592.t1 | MTR_6g015020 | 55.046 | 218 | 88 | 5 | 66 | 276 | 62 | 276 | 3.17e-62 | 197 |
| MS.gene52592.t1 | MTR_7g013100 | 52.423 | 227 | 88 | 4 | 66 | 276 | 63 | 285 | 1.11e-58 | 189 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52592.t1 | AT5G16390 | 47.635 | 296 | 116 | 8 | 2 | 277 | 3 | 279 | 1.87e-71 | 221 |
| MS.gene52592.t1 | AT5G15530 | 50.661 | 227 | 85 | 5 | 59 | 276 | 45 | 253 | 6.38e-62 | 196 |
| MS.gene52592.t1 | AT5G16390 | 45.896 | 268 | 106 | 8 | 2 | 249 | 3 | 251 | 3.80e-55 | 179 |
Find 81 sgRNAs with CRISPR-Local
Find 357 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGGAGAGAGTTGTTGGAATT+AGG | 0.229652 | 7.4:-25946355 | None:intergenic |
| TCAACATCTGATTTGGCTTT+AGG | 0.237476 | 7.4:-25947247 | None:intergenic |
| GCTCTATTCAATCACAAATA+AGG | 0.243185 | 7.4:-25951625 | None:intergenic |
| CGGTGGTTCAACATCTGATT+TGG | 0.261689 | 7.4:-25947254 | None:intergenic |
| CTTACAGTATCAACGCTTAC+AGG | 0.270452 | 7.4:-25951515 | None:intergenic |
| GAATGTTTACCTCATTTAAC+TGG | 0.275310 | 7.4:-25946524 | None:intergenic |
| AGAGGCGGACGTGATGATTT+AGG | 0.305522 | 7.4:-25948078 | None:intergenic |
| TTCAACAAGGTTGCCCTTGA+TGG | 0.321266 | 7.4:+25947205 | MS.gene52592:intron |
| GCAGGTTGAGGAGCATATTC+TGG | 0.327362 | 7.4:-25947949 | None:intergenic |
| ATGAGAAAAGCGTGCAGATT+TGG | 0.332822 | 7.4:-25946305 | None:intergenic |
| TCAGTTGAACCATCTTCTTC+AGG | 0.335118 | 7.4:+25947286 | MS.gene52592:CDS |
| ATTTAACTGGGCCTTAACCC+TGG | 0.377458 | 7.4:-25946511 | None:intergenic |
| GCTATTATGCCCCAGGGTTA+AGG | 0.391263 | 7.4:+25946500 | MS.gene52592:CDS |
| TAAACTGTGAAGTACTAATC+AGG | 0.422789 | 7.4:+25947905 | MS.gene52592:CDS |
| CTCTATTCAATCACAAATAA+GGG | 0.424132 | 7.4:-25951624 | None:intergenic |
| AGAGTATGTGATGGCGCAAC+AGG | 0.424416 | 7.4:-25948006 | None:intergenic |
| CGGTAGAATGTCCCTGCCAT+GGG | 0.434814 | 7.4:-25948108 | None:intergenic |
| GGGCATAATAGCATATGATT+AGG | 0.451440 | 7.4:-25946489 | None:intergenic |
| TTTAACTGGGCCTTAACCCT+GGG | 0.451990 | 7.4:-25946510 | None:intergenic |
| GGCTTTAGGAGGCACATCAT+TGG | 0.466527 | 7.4:-25947233 | None:intergenic |
| GTATTCACAACCTTCGCAAA+CGG | 0.468806 | 7.4:+25947978 | MS.gene52592:CDS |
| GAAGTTGGCGTTGAAGGAGC+AGG | 0.470077 | 7.4:-25948036 | None:intergenic |
| TGAACCATCTTCTTCAGGCT+TGG | 0.483109 | 7.4:+25947291 | MS.gene52592:CDS |
| ATCATATGCTATTATGCCCC+AGG | 0.484549 | 7.4:+25946493 | MS.gene52592:CDS |
| ACTATGCAGGCTGATAAGTC+AGG | 0.498671 | 7.4:+25951458 | MS.gene52592:intron |
| CCTCTTAAAAGCCCCATGGC+AGG | 0.499067 | 7.4:+25948096 | MS.gene52592:CDS |
| AACGGAGGTTCACCCGGTGC+AGG | 0.503250 | 7.4:-25948135 | None:intergenic |
| TCGGTAGAATGTCCCTGCCA+TGG | 0.503817 | 7.4:-25948109 | None:intergenic |
| TGGAATTAGGAGAGAGACGA+GGG | 0.509409 | 7.4:-25946342 | None:intergenic |
| GATGATTTAGGTAGCTTGAC+AGG | 0.515867 | 7.4:-25948066 | None:intergenic |
| CATAATAGCATATGATTAGG+TGG | 0.518130 | 7.4:-25946486 | None:intergenic |
| AGAGAGACGAGGGAAAGTGA+TGG | 0.519967 | 7.4:-25946332 | None:intergenic |
| GAGACGAGGGAAAGTGATGG+AGG | 0.521390 | 7.4:-25946329 | None:intergenic |
| GTTCACCCGGTGCAGGACTT+CGG | 0.523121 | 7.4:-25948128 | None:intergenic |
| GGTGGGAGACGAAGTAAAGA+AGG | 0.523639 | 7.4:+25948241 | MS.gene52592:intron |
| TGAGGAGCATATTCTGGTTG+AGG | 0.524502 | 7.4:-25947943 | None:intergenic |
| ACATCTGATTTGGCTTTAGG+AGG | 0.528612 | 7.4:-25947244 | None:intergenic |
| AGGAGCAGCAGAAGGTGAAG+TGG | 0.529974 | 7.4:-25946248 | None:intergenic |
| ACAGGTGGCGCCGTTTGCGA+AGG | 0.536548 | 7.4:-25947988 | None:intergenic |
| AGAAAAGCGTGCAGATTTGG+TGG | 0.540319 | 7.4:-25946302 | None:intergenic |
| CTCTTAAAAGCCCCATGGCA+GGG | 0.542024 | 7.4:+25948097 | MS.gene52592:CDS |
| GAATACAACAATGCAGGTTG+AGG | 0.544649 | 7.4:-25947961 | None:intergenic |
| GAAGAAGATGGTTCAACTGA+AGG | 0.548422 | 7.4:-25947283 | None:intergenic |
| TTAGGTAGCTTGACAGGAGG+GGG | 0.550253 | 7.4:-25948060 | None:intergenic |
| AGAAGGTGAAGTGGAGGACA+AGG | 0.552162 | 7.4:-25946239 | None:intergenic |
| GGAAGATCTACCTTCACAAA+CGG | 0.553357 | 7.4:-25948153 | None:intergenic |
| AGCAGCAGAAGGTGAAGTGG+AGG | 0.563171 | 7.4:-25946245 | None:intergenic |
| ATTTAGGTAGCTTGACAGGA+GGG | 0.566371 | 7.4:-25948062 | None:intergenic |
| TTCACAAACGGAGGTTCACC+CGG | 0.577004 | 7.4:-25948141 | None:intergenic |
| CATCATTGGAAGAACCATCA+AGG | 0.577639 | 7.4:-25947219 | None:intergenic |
| TGTTGCGCCATCACATACTC+TGG | 0.579696 | 7.4:+25948008 | MS.gene52592:CDS |
| TCTGCCAAGCCTGAAGAAGA+TGG | 0.583819 | 7.4:-25947295 | None:intergenic |
| ATTCTACCGAAGTCCTGCAC+CGG | 0.585909 | 7.4:+25948122 | MS.gene52592:CDS |
| AGTACTAATCAGGAAGAAAG+AGG | 0.587578 | 7.4:+25947915 | MS.gene52592:CDS |
| TCAACTGAAGGTGCGGTCGG+TGG | 0.589627 | 7.4:-25947271 | None:intergenic |
| ATAATAGCATATGATTAGGT+GGG | 0.590780 | 7.4:-25946485 | None:intergenic |
| GGTTGTGAATACAACAATGC+AGG | 0.591023 | 7.4:-25947967 | None:intergenic |
| GTGGGAGACGAAGTAAAGAA+GGG | 0.592291 | 7.4:+25948242 | MS.gene52592:CDS |
| TTTAGGTAGCTTGACAGGAG+GGG | 0.592826 | 7.4:-25948061 | None:intergenic |
| GAAGCTGCAACAGTAACAGT+AGG | 0.602939 | 7.4:-25946268 | None:intergenic |
| TTGGAATTAGGAGAGAGACG+AGG | 0.607140 | 7.4:-25946343 | None:intergenic |
| GGTTCAACTGAAGGTGCGGT+CGG | 0.607776 | 7.4:-25947274 | None:intergenic |
| GTATGTGATGGCGCAACAGG+TGG | 0.609933 | 7.4:-25948003 | None:intergenic |
| TTCTACCGAAGTCCTGCACC+GGG | 0.615606 | 7.4:+25948123 | MS.gene52592:CDS |
| ATCATTGGAAGAACCATCAA+GGG | 0.616659 | 7.4:-25947218 | None:intergenic |
| AATGTTTACCTCATTTAACT+GGG | 0.618081 | 7.4:-25946523 | None:intergenic |
| AGGTGAAGTGGAGGACAAGG+AGG | 0.619998 | 7.4:-25946236 | None:intergenic |
| GGAAGAGCCAGAGTATGTGA+TGG | 0.623698 | 7.4:-25948015 | None:intergenic |
| CTATGCAGGCTGATAAGTCA+GGG | 0.634299 | 7.4:+25951459 | MS.gene52592:intron |
| GGTTAAGGCCCAGTTAAATG+AGG | 0.635624 | 7.4:+25946515 | MS.gene52592:CDS |
| GGGTGAACCTCCGTTTGTGA+AGG | 0.635773 | 7.4:+25948143 | MS.gene52592:CDS |
| TCATATGCTATTATGCCCCA+GGG | 0.636266 | 7.4:+25946494 | MS.gene52592:CDS |
| GACTATAGTTGAAATAATCG+CGG | 0.639005 | 7.4:+25951481 | MS.gene52592:CDS |
| GATTTAGGTAGCTTGACAGG+AGG | 0.644259 | 7.4:-25948063 | None:intergenic |
| TCCGCCTCTTAAAAGCCCCA+TGG | 0.655613 | 7.4:+25948092 | MS.gene52592:CDS |
| AGATGGTTCAACTGAAGGTG+CGG | 0.664821 | 7.4:-25947278 | None:intergenic |
| TTAACTGGGCCTTAACCCTG+GGG | 0.667597 | 7.4:-25946509 | None:intergenic |
| GTAACAGTAGGAGCAGCAGA+AGG | 0.674269 | 7.4:-25946256 | None:intergenic |
| TGGGAGACGAAGTAAAGAAG+GGG | 0.685600 | 7.4:+25948243 | MS.gene52592:CDS |
| GGTAGAATGTCCCTGCCATG+GGG | 0.689727 | 7.4:-25948107 | None:intergenic |
| AGATCTACCTTCACAAACGG+AGG | 0.698623 | 7.4:-25948150 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATAATAATATTATTTTATT+TGG | + | chr7.4:25948681-25948700 | MS.gene52592:intron | 0.0% |
| !! | AAGAAAAATAGTAATAAATA+GGG | + | chr7.4:25947651-25947670 | MS.gene52592:intron | 10.0% |
| !! | TAAGAAAAATAGTAATAAAT+AGG | + | chr7.4:25947650-25947669 | MS.gene52592:intron | 10.0% |
| !!! | CTTTATTTAAATGTTGAATT+TGG | + | chr7.4:25948797-25948816 | MS.gene52592:intron | 15.0% |
| !!! | GTATATTAGGTTTTTATATT+GGG | - | chr7.4:25950543-25950562 | None:intergenic | 15.0% |
| !!! | GTTTTGTTAGTATTTAAATA+AGG | + | chr7.4:25950938-25950957 | MS.gene52592:intron | 15.0% |
| !!! | TGTATATTAGGTTTTTATAT+TGG | - | chr7.4:25950544-25950563 | None:intergenic | 15.0% |
| !!! | TTATTATTTTAGTTCAGAAT+AGG | + | chr7.4:25951227-25951246 | MS.gene52592:intron | 15.0% |
| !!! | TTCTTTTTGTTTTCTTTTTT+TGG | + | chr7.4:25950846-25950865 | MS.gene52592:intron | 15.0% |
| !!! | TTTCTGAATATTTTGTTTTT+CGG | + | chr7.4:25950075-25950094 | MS.gene52592:intron | 15.0% |
| !! | AAATAAAAGATGTTCAAAAG+TGG | + | chr7.4:25949171-25949190 | MS.gene52592:intron | 20.0% |
| !! | AACATTTAAATAAAGCAAAG+AGG | - | chr7.4:25948792-25948811 | None:intergenic | 20.0% |
| !! | AACTTTCAAAACAAGAAAAT+TGG | + | chr7.4:25947615-25947634 | MS.gene52592:intron | 20.0% |
| !! | ATAAGAATACAACTATTAGA+AGG | - | chr7.4:25951106-25951125 | None:intergenic | 20.0% |
| !! | ATATTTCATAATATGTGAAC+AGG | + | chr7.4:25950916-25950935 | MS.gene52592:intron | 20.0% |
| !! | ATCTTAAAGAACTGTTAATT+TGG | + | chr7.4:25947738-25947757 | MS.gene52592:intron | 20.0% |
| !! | CGAAGTATAGATATTAATTT+AGG | - | chr7.4:25946411-25946430 | None:intergenic | 20.0% |
| !! | TAAGACCTTATCTTTAATAT+AGG | - | chr7.4:25950258-25950277 | None:intergenic | 20.0% |
| !! | TGTTCACATATTATGAAATA+TGG | - | chr7.4:25950917-25950936 | None:intergenic | 20.0% |
| !! | TTAATGATGATTCGATATAT+TGG | + | chr7.4:25950217-25950236 | MS.gene52592:intron | 20.0% |
| !! | TTGATACTGTAAGTATATTT+CGG | + | chr7.4:25951525-25951544 | MS.gene52592:intron | 20.0% |
| !!! | ATTCTTTGTATAATGCTTTT+TGG | + | chr7.4:25948191-25948210 | MS.gene52592:intron | 20.0% |
| !!! | CAGTTTTATCAATATAAACA+TGG | + | chr7.4:25949031-25949050 | MS.gene52592:intron | 20.0% |
| !!! | CTTAAATTTGATTTCTAACT+TGG | + | chr7.4:25951333-25951352 | MS.gene52592:intron | 20.0% |
| !!! | TAAAACATTTTTGTGTTATG+AGG | - | chr7.4:25949589-25949608 | None:intergenic | 20.0% |
| !!! | TCTTAATTTCTTTTGAGAAA+TGG | + | chr7.4:25948536-25948555 | MS.gene52592:intron | 20.0% |
| !!! | TCTTATTGTGTTAGTTTATT+AGG | + | chr7.4:25949264-25949283 | MS.gene52592:intron | 20.0% |
| !!! | TGACTTTTTTATTTGCATTT+TGG | - | chr7.4:25951368-25951387 | None:intergenic | 20.0% |
| !!! | TTTGAATTTTGTAGAATTGT+TGG | - | chr7.4:25949861-25949880 | None:intergenic | 20.0% |
| !!! | TTTTGTTTTCTTTTTTTGGT+AGG | + | chr7.4:25950850-25950869 | MS.gene52592:intron | 20.0% |
| ! | AAATAAGCACCTATATACTT+TGG | - | chr7.4:25948978-25948997 | None:intergenic | 25.0% |
| ! | AATGTTTACCTCATTTAACT+GGG | - | chr7.4:25946526-25946545 | None:intergenic | 25.0% |
| ! | ACACAATAAGATTTGAAAAC+AGG | - | chr7.4:25949255-25949274 | None:intergenic | 25.0% |
| ! | ACATATATTACGCATTTATG+TGG | - | chr7.4:25948464-25948483 | None:intergenic | 25.0% |
| ! | ACCTTATCTTTAATATAGGT+GGG | - | chr7.4:25950254-25950273 | None:intergenic | 25.0% |
| ! | AGCACGCATTTATTAATAAT+TGG | + | chr7.4:25947584-25947603 | MS.gene52592:intron | 25.0% |
| ! | AGGTATAATTAATGATGCAT+TGG | - | chr7.4:25947489-25947508 | None:intergenic | 25.0% |
| ! | AGTAATATAAATCTTTACCG+TGG | - | chr7.4:25948912-25948931 | None:intergenic | 25.0% |
| ! | AGTTATTGTTTCATGGTTAA+AGG | - | chr7.4:25950719-25950738 | None:intergenic | 25.0% |
| ! | ATAATAGCATATGATTAGGT+GGG | - | chr7.4:25946488-25946507 | None:intergenic | 25.0% |
| ! | ATACACACAAAACTATAGAA+TGG | + | chr7.4:25948510-25948529 | MS.gene52592:intron | 25.0% |
| ! | CAAAGGAAAATCTTAATTAC+TGG | + | chr7.4:25949001-25949020 | MS.gene52592:intron | 25.0% |
| ! | CATTAAGCTAGTGATTTATT+TGG | - | chr7.4:25950203-25950222 | None:intergenic | 25.0% |
| ! | CTGACTCAAAAACATAAATT+CGG | + | chr7.4:25949997-25950016 | MS.gene52592:intron | 25.0% |
| ! | GTAATATAAATCTTTACCGT+GGG | - | chr7.4:25948911-25948930 | None:intergenic | 25.0% |
| ! | GTATTCTTATGTCATTCATA+AGG | + | chr7.4:25951116-25951135 | MS.gene52592:intron | 25.0% |
| ! | GTCTGACATATAATTAATGA+GGG | - | chr7.4:25947522-25947541 | None:intergenic | 25.0% |
| ! | GTGATATATTCTGAATATCT+TGG | + | chr7.4:25950168-25950187 | MS.gene52592:intron | 25.0% |
| ! | TACATACTATGACTCTATAA+GGG | + | chr7.4:25948372-25948391 | MS.gene52592:intron | 25.0% |
| ! | TATATGAAGGATTCTTTCTT+AGG | + | chr7.4:25948220-25948239 | MS.gene52592:intron | 25.0% |
| ! | TATCAAGAAATGCGATAAAT+TGG | - | chr7.4:25947707-25947726 | None:intergenic | 25.0% |
| ! | TCAAATAAGTCAATTCAAAC+AGG | - | chr7.4:25946677-25946696 | None:intergenic | 25.0% |
| ! | TCTGACATATAATTAATGAG+GGG | - | chr7.4:25947521-25947540 | None:intergenic | 25.0% |
| ! | TCTTCATTTCATTTGAGAAA+TGG | - | chr7.4:25948410-25948429 | None:intergenic | 25.0% |
| ! | TGTCTGACATATAATTAATG+AGG | - | chr7.4:25947523-25947542 | None:intergenic | 25.0% |
| ! | TTACTAGAGTTTATAAAGAG+TGG | + | chr7.4:25950275-25950294 | MS.gene52592:intron | 25.0% |
| ! | TTAGGATTCTCTTCATTTAA+TGG | + | chr7.4:25948624-25948643 | MS.gene52592:intron | 25.0% |
| ! | TTGATGCAATGTTTATTGTA+TGG | - | chr7.4:25951296-25951315 | None:intergenic | 25.0% |
| ! | TTTATGACACCAAAGTATAT+AGG | + | chr7.4:25948966-25948985 | MS.gene52592:intron | 25.0% |
| ! | TTTCAAAACAAGAAAATTGG+TGG | + | chr7.4:25947618-25947637 | MS.gene52592:intron | 25.0% |
| ! | TTTCCTCATTTAATCTAAGA+GGG | + | chr7.4:25946994-25947013 | MS.gene52592:intron | 25.0% |
| ! | TTTGGATTGAAGAATATCAT+TGG | + | chr7.4:25949370-25949389 | MS.gene52592:intron | 25.0% |
| ! | TTTGTTCCTATTCTCTTTAA+CGG | + | chr7.4:25950874-25950893 | MS.gene52592:intron | 25.0% |
| !! | AAAGAACTGTTAATTTGGAA+TGG | + | chr7.4:25947743-25947762 | MS.gene52592:intron | 25.0% |
| !! | AGGTGGAATTTTAGATTTAT+TGG | - | chr7.4:25949725-25949744 | None:intergenic | 25.0% |
| !! | ATTGTGTTAGTTTATTAGGA+GGG | + | chr7.4:25949268-25949287 | MS.gene52592:intron | 25.0% |
| !! | CAACTATTAATTTTGAACAG+AGG | - | chr7.4:25947413-25947432 | None:intergenic | 25.0% |
| !! | CCATATTAGGTTTTTATACA+GGG | - | chr7.4:25950342-25950361 | None:intergenic | 25.0% |
| !! | CTTTTCTCAATTTGATTACT+TGG | - | chr7.4:25950761-25950780 | None:intergenic | 25.0% |
| !! | GGTGGAATTTTAGATTTATT+GGG | - | chr7.4:25949724-25949743 | None:intergenic | 25.0% |
| !! | TAGAATTGTTGGTGAAAAAA+TGG | - | chr7.4:25949850-25949869 | None:intergenic | 25.0% |
| !! | TATTGTGTTAGTTTATTAGG+AGG | + | chr7.4:25949267-25949286 | MS.gene52592:intron | 25.0% |
| !! | TTTATTCAAATCTGAAGTGT+CGG | + | chr7.4:25946943-25946962 | MS.gene52592:intron | 25.0% |
| !! | TTTTCCTCATTTAATCTAAG+AGG | + | chr7.4:25946993-25947012 | MS.gene52592:intron | 25.0% |
| !!! | ATACATTTCTATGCTGATTT+TGG | + | chr7.4:25947167-25947186 | MS.gene52592:intron | 25.0% |
| !!! | ATGTGTAGGTTTTTTTGTTA+AGG | + | chr7.4:25951009-25951028 | MS.gene52592:intron | 25.0% |
| AAATAAAGCAAAGAGGAGTT+GGG | - | chr7.4:25948785-25948804 | None:intergenic | 30.0% | |
| AAATATGGACTTCTGCATAA+AGG | - | chr7.4:25950902-25950921 | None:intergenic | 30.0% | |
| AAATCAAACCTCTAATGACA+AGG | - | chr7.4:25951587-25951606 | None:intergenic | 30.0% | |
| AAATGGCACTTTCCATTAAA+CGG | + | chr7.4:25948752-25948771 | MS.gene52592:intron | 30.0% | |
| AACATGTTAGGTAGACAATT+AGG | + | chr7.4:25949324-25949343 | MS.gene52592:intron | 30.0% | |
| ACACAATTACAGTCATTGAT+TGG | + | chr7.4:25947036-25947055 | MS.gene52592:intron | 30.0% | |
| ACATGTTAGGTAGACAATTA+GGG | + | chr7.4:25949325-25949344 | MS.gene52592:intron | 30.0% | |
| ACTATATTTGTGTACTATGC+AGG | + | chr7.4:25951445-25951464 | MS.gene52592:intron | 30.0% | |
| ACTCTTTATAAACTCTAGTC+AGG | - | chr7.4:25950479-25950498 | None:intergenic | 30.0% | |
| AGTGATTTATTTGGATGTTC+AGG | - | chr7.4:25950194-25950213 | None:intergenic | 30.0% | |
| ATAAGCGCTTATCATGAATA+GGG | - | chr7.4:25946900-25946919 | None:intergenic | 30.0% | |
| ATTTGAAAACAGGCTTGAAT+TGG | - | chr7.4:25949245-25949264 | None:intergenic | 30.0% | |
| CAGAAAAACAAAATAGAGCA+AGG | - | chr7.4:25950061-25950080 | None:intergenic | 30.0% | |
| CATAATAGCATATGATTAGG+TGG | - | chr7.4:25946489-25946508 | None:intergenic | 30.0% | |
| CATAGAAATGTATGTCTATG+TGG | - | chr7.4:25947160-25947179 | None:intergenic | 30.0% | |
| CCAAGCTATGTTTGTATATT+AGG | - | chr7.4:25950556-25950575 | None:intergenic | 30.0% | |
| CCCTGTATAAAAACCTAATA+TGG | + | chr7.4:25950339-25950358 | MS.gene52592:intron | 30.0% | |
| CCTAATATACAAACATAGCT+TGG | + | chr7.4:25950553-25950572 | MS.gene52592:intron | 30.0% | |
| CTACATACTATGACTCTATA+AGG | + | chr7.4:25948371-25948390 | MS.gene52592:intron | 30.0% | |
| CTATATAATGTACGACATGA+TGG | + | chr7.4:25948824-25948843 | MS.gene52592:intron | 30.0% | |
| CTCAGTAAGTTATTGTTTCA+TGG | - | chr7.4:25950726-25950745 | None:intergenic | 30.0% | |
| GAAGATAAAATGTGATACCT+TGG | - | chr7.4:25946389-25946408 | None:intergenic | 30.0% | |
| GAATGTTTACCTCATTTAAC+TGG | - | chr7.4:25946527-25946546 | None:intergenic | 30.0% | |
| GACAGATATAATAGGTGTTA+GGG | + | chr7.4:25949078-25949097 | MS.gene52592:intron | 30.0% | |
| GACCTTATCTTTAATATAGG+TGG | - | chr7.4:25950255-25950274 | None:intergenic | 30.0% | |
| GACTATAGTTGAAATAATCG+CGG | + | chr7.4:25951481-25951500 | MS.gene52592:CDS | 30.0% | |
| GATAGATATGGAGTGTAAAA+GGG | - | chr7.4:25946551-25946570 | None:intergenic | 30.0% | |
| GATATTCAGAATATATCACC+AGG | - | chr7.4:25950167-25950186 | None:intergenic | 30.0% | |
| GCTAAAACTATTATGTCCAT+TGG | + | chr7.4:25947681-25947700 | MS.gene52592:intron | 30.0% | |
| GGTAAGTGTATATAAACGAT+GGG | - | chr7.4:25950390-25950409 | None:intergenic | 30.0% | |
| GTCTTATCCTTAATCTATGT+GGG | - | chr7.4:25950457-25950476 | None:intergenic | 30.0% | |
| TAAATAAAGCAAAGAGGAGT+TGG | - | chr7.4:25948786-25948805 | None:intergenic | 30.0% | |
| TATCATTGGAATGAAAGAAG+AGG | + | chr7.4:25949384-25949403 | MS.gene52592:intron | 30.0% | |
| TCCCACCTATATTAAAGATA+AGG | + | chr7.4:25950250-25950269 | MS.gene52592:intron | 30.0% | |
| TCCTTGGTTATTCAAACAAA+GGG | - | chr7.4:25949616-25949635 | None:intergenic | 30.0% | |
| TCTACAAAATTCAAACGTGA+GGG | + | chr7.4:25949866-25949885 | MS.gene52592:intron | 30.0% | |
| TGATAGATATGGAGTGTAAA+AGG | - | chr7.4:25946552-25946571 | None:intergenic | 30.0% | |
| TGGTAAGTGTATATAAACGA+TGG | - | chr7.4:25950391-25950410 | None:intergenic | 30.0% | |
| TTAATGAGGGGAAAATAAGA+AGG | - | chr7.4:25947509-25947528 | None:intergenic | 30.0% | |
| TTCCTTGGTTATTCAAACAA+AGG | - | chr7.4:25949617-25949636 | None:intergenic | 30.0% | |
| TTCTACAAAATTCAAACGTG+AGG | + | chr7.4:25949865-25949884 | MS.gene52592:intron | 30.0% | |
| TTCTTATGTCATTCATAAGG+AGG | + | chr7.4:25951119-25951138 | MS.gene52592:intron | 30.0% | |
| TTTGAAAACAGGCTTGAATT+GGG | - | chr7.4:25949244-25949263 | None:intergenic | 30.0% | |
| ! | GCCATATTAGGTTTTTATAC+AGG | - | chr7.4:25950343-25950362 | None:intergenic | 30.0% |
| ! | GTTTGTATTTTTCTTTCCCA+CGG | + | chr7.4:25948892-25948911 | MS.gene52592:intron | 30.0% |
| ! | TAAACTGTGAAGTACTAATC+AGG | + | chr7.4:25947905-25947924 | MS.gene52592:CDS | 30.0% |
| ! | TCTATCAAGAGAACAGATTT+TGG | - | chr7.4:25947121-25947140 | None:intergenic | 30.0% |
| !! | AACACTTTGAGAGACTATTT+TGG | + | chr7.4:25946714-25946733 | MS.gene52592:intron | 30.0% |
| !! | AAGTTTGTTAACACATGTGT+AGG | + | chr7.4:25950995-25951014 | MS.gene52592:intron | 30.0% |
| !! | AATGCGTGCTTGATAATTTT+TGG | - | chr7.4:25947574-25947593 | None:intergenic | 30.0% |
| !! | ATTTAATGGAAAGTGCCATT+TGG | + | chr7.4:25948638-25948657 | MS.gene52592:intron | 30.0% |
| !! | ATTTCTTTTGAGAAATGGAG+AGG | + | chr7.4:25948541-25948560 | MS.gene52592:intron | 30.0% |
| !! | GAATAAAGAGAGTTCTGAAA+AGG | + | chr7.4:25949550-25949569 | MS.gene52592:intron | 30.0% |
| !! | GTAACTGCTGTCTAAAATTT+TGG | + | chr7.4:25948345-25948364 | MS.gene52592:intron | 30.0% |
| !! | TCTAACTCATCCTTTAAAAC+CGG | - | chr7.4:25950319-25950338 | None:intergenic | 30.0% |
| !! | TGATTTTGGTCTCTCTTTTT+TGG | + | chr7.4:25947181-25947200 | MS.gene52592:intron | 30.0% |
| !! | TTGTTGCGAAAGTTTTGTAT+TGG | + | chr7.4:25949521-25949540 | MS.gene52592:intron | 30.0% |
| !! | TTTTTGGCAGCTTTATATGA+AGG | + | chr7.4:25948207-25948226 | MS.gene52592:intron | 30.0% |
| !!! | ATAGGTGCTTATTTTTGCAA+AGG | + | chr7.4:25948984-25949003 | MS.gene52592:intron | 30.0% |
| !!! | TGGTCATTGTATTTTGATTG+TGG | + | chr7.4:25949201-25949220 | MS.gene52592:intron | 30.0% |
| !!! | TTTTAGTTTTTACCACACTC+TGG | + | chr7.4:25950022-25950041 | MS.gene52592:intron | 30.0% |
| AAACAACCGAAACTAAAGTG+AGG | + | chr7.4:25949442-25949461 | MS.gene52592:intron | 35.0% | |
| AAACTTTCGCAACAATGAAG+AGG | - | chr7.4:25949516-25949535 | None:intergenic | 35.0% | |
| AAATGCGATAAATTGGCCAA+TGG | - | chr7.4:25947700-25947719 | None:intergenic | 35.0% | |
| AACAAGTCCCACATAGATTA+AGG | + | chr7.4:25950447-25950466 | MS.gene52592:intron | 35.0% | |
| AACTTTCGCAACAATGAAGA+GGG | - | chr7.4:25949515-25949534 | None:intergenic | 35.0% | |
| AAGCTGAATGAGACACATAA+AGG | + | chr7.4:25950778-25950797 | MS.gene52592:intron | 35.0% | |
| AAGGAACCGTTAAAGAGAAT+AGG | - | chr7.4:25950883-25950902 | None:intergenic | 35.0% | |
| AAGTGTATATAAACGATGGG+TGG | - | chr7.4:25950387-25950406 | None:intergenic | 35.0% | |
| ACCAATATCCTTGTCATTAG+AGG | + | chr7.4:25951576-25951595 | MS.gene52592:intron | 35.0% | |
| ACCTCTAATGACAAGGATAT+TGG | - | chr7.4:25951580-25951599 | None:intergenic | 35.0% | |
| ACGGCAGAAATTTGACAAAA+TGG | + | chr7.4:25949141-25949160 | MS.gene52592:intron | 35.0% | |
| ACTTGTGAGTACTAGTCAAT+AGG | - | chr7.4:25951553-25951572 | None:intergenic | 35.0% | |
| AGTACTAATCAGGAAGAAAG+AGG | + | chr7.4:25947915-25947934 | MS.gene52592:CDS | 35.0% | |
| ATCATTGGAAGAACCATCAA+GGG | - | chr7.4:25947221-25947240 | None:intergenic | 35.0% | |
| ATGAAGGATTCTTTCTTAGG+TGG | + | chr7.4:25948223-25948242 | MS.gene52592:intron | 35.0% | |
| ATGACTACTAGGAACATGTT+AGG | + | chr7.4:25949312-25949331 | MS.gene52592:intron | 35.0% | |
| ATGCCCTCTTAGATTAAATG+AGG | - | chr7.4:25947000-25947019 | None:intergenic | 35.0% | |
| CAAAAAGAACAATCATCCTG+AGG | - | chr7.4:25950835-25950854 | None:intergenic | 35.0% | |
| CAAACATAGCTTGGAAACTT+AGG | + | chr7.4:25950562-25950581 | MS.gene52592:intron | 35.0% | |
| CATAAGCGCTTATCATGAAT+AGG | - | chr7.4:25946901-25946920 | None:intergenic | 35.0% | |
| CGAAACACGACAGATATAAT+AGG | + | chr7.4:25949070-25949089 | MS.gene52592:intron | 35.0% | |
| CGACAGATATAATAGGTGTT+AGG | + | chr7.4:25949077-25949096 | MS.gene52592:intron | 35.0% | |
| CTACGTGTCAATATCATGTT+CGG | - | chr7.4:25946592-25946611 | None:intergenic | 35.0% | |
| CTGCAGTAGAAAAATACACA+AGG | - | chr7.4:25947841-25947860 | None:intergenic | 35.0% | |
| CTTGTGAGTACTAGTCAATA+GGG | - | chr7.4:25951552-25951571 | None:intergenic | 35.0% | |
| GATCTTGTGTCAGTCATTAT+TGG | - | chr7.4:25949104-25949123 | None:intergenic | 35.0% | |
| GGGCATAATAGCATATGATT+AGG | - | chr7.4:25946492-25946511 | None:intergenic | 35.0% | |
| GTGTTACATATGTTGTTCTG+CGG | - | chr7.4:25949760-25949779 | None:intergenic | 35.0% | |
| TCAATATAAACATGGCGTTG+CGG | + | chr7.4:25949039-25949058 | MS.gene52592:intron | 35.0% | |
| TCTTTAATATAGGTGGGACT+TGG | - | chr7.4:25950248-25950267 | None:intergenic | 35.0% | |
| TGAAGGATTCTTTCTTAGGT+GGG | + | chr7.4:25948224-25948243 | MS.gene52592:intron | 35.0% | |
| TGAGTCTATCTTCCTCTAAA+TGG | + | chr7.4:25948735-25948754 | MS.gene52592:intron | 35.0% | |
| TGAGTTTATCTCTCTCCAAA+TGG | - | chr7.4:25948656-25948675 | None:intergenic | 35.0% | |
| TGTTCAAAAGTGGAGTAGAA+TGG | + | chr7.4:25949181-25949200 | MS.gene52592:intron | 35.0% | |
| TTCAGAATATATCACCAGGT+AGG | - | chr7.4:25950163-25950182 | None:intergenic | 35.0% | |
| TTCTTGTTGAACAAGTTCCA+AGG | - | chr7.4:25949804-25949823 | None:intergenic | 35.0% | |
| TTCTTTCTCTTTGCTGAGTT+AGG | + | chr7.4:25948606-25948625 | MS.gene52592:intron | 35.0% | |
| ! | AAACAACAGCTAAGCCTTAT+AGG | - | chr7.4:25950131-25950150 | None:intergenic | 35.0% |
| ! | ATTTTGTCAAATTTCTGCCG+TGG | - | chr7.4:25949142-25949161 | None:intergenic | 35.0% |
| ! | CTTGTGTATTTTTCTACTGC+AGG | + | chr7.4:25947839-25947858 | MS.gene52592:intron | 35.0% |
| ! | GAACTGTTAATTTGGAATGG+AGG | + | chr7.4:25947746-25947765 | MS.gene52592:intron | 35.0% |
| ! | GCCCTTATTTGTGATTGAAT+AGG | + | chr7.4:25951623-25951642 | MS.gene52592:intron | 35.0% |
| ! | GGTCTTATCCTTAATCTATG+TGG | - | chr7.4:25950458-25950477 | None:intergenic | 35.0% |
| ! | GTAGTTGGTATAAGCCTATA+AGG | + | chr7.4:25950114-25950133 | MS.gene52592:intron | 35.0% |
| ! | TATAGGTGGATTTATTCCTC+AGG | + | chr7.4:25950816-25950835 | MS.gene52592:intron | 35.0% |
| ! | TCCCTTTGTTTGAATAACCA+AGG | + | chr7.4:25949612-25949631 | MS.gene52592:intron | 35.0% |
| ! | TGTCTGTGTGTTGATAGATA+TGG | - | chr7.4:25946563-25946582 | None:intergenic | 35.0% |
| ! | TTTGGGAAAGGCTTGTTTAA+TGG | - | chr7.4:25949677-25949696 | None:intergenic | 35.0% |
| !! | ACCTTGAAATCCGGTTTTAA+AGG | + | chr7.4:25950306-25950325 | MS.gene52592:intron | 35.0% |
| !! | ATGGAGGAAGTACTTATTGT+TGG | + | chr7.4:25947762-25947781 | MS.gene52592:intron | 35.0% |
| !! | TAAAGGCATCACTATAACTG+TGG | - | chr7.4:25950702-25950721 | None:intergenic | 35.0% |
| !! | TAATGGAAAGTGCCATTTAG+AGG | - | chr7.4:25948750-25948769 | None:intergenic | 35.0% |
| !! | TCAACATCTGATTTGGCTTT+AGG | - | chr7.4:25947250-25947269 | None:intergenic | 35.0% |
| !! | TCCTTTAAAACCGGATTTCA+AGG | - | chr7.4:25950310-25950329 | None:intergenic | 35.0% |
| !!! | AACTGTGGTTTTATTGTCGA+GGG | - | chr7.4:25950687-25950706 | None:intergenic | 35.0% |
| !!! | AATCTAAGAGGGCATTTTAG+AGG | + | chr7.4:25947005-25947024 | MS.gene52592:intron | 35.0% |
| !!! | ACTTCACTTCACTGTTTTTG+TGG | + | chr7.4:25951253-25951272 | MS.gene52592:intron | 35.0% |
| !!! | CTTCACTTCACTGTTTTTGT+GGG | + | chr7.4:25951254-25951273 | MS.gene52592:intron | 35.0% |
| !!! | TAACTGTGGTTTTATTGTCG+AGG | - | chr7.4:25950688-25950707 | None:intergenic | 35.0% |
| !!! | TCTCTTTTTTGGCTTCAACA+AGG | + | chr7.4:25947192-25947211 | MS.gene52592:intron | 35.0% |
| !!! | TGGTTCTTTCAAGTTTTCCT+TGG | - | chr7.4:25949632-25949651 | None:intergenic | 35.0% |
| !!! | TTCACTGTTTTTGTGGGTTA+TGG | + | chr7.4:25951260-25951279 | MS.gene52592:intron | 35.0% |
| AAAACCGGATTTCAAGGTGA+AGG | - | chr7.4:25950304-25950323 | None:intergenic | 40.0% | |
| AAAATAGAGCAAGGCATACC+AGG | - | chr7.4:25950052-25950071 | None:intergenic | 40.0% | |
| AAAATTCAAACGTGAGGGCT+AGG | + | chr7.4:25949871-25949890 | MS.gene52592:intron | 40.0% | |
| AAACCGGATTTCAAGGTGAA+GGG | - | chr7.4:25950303-25950322 | None:intergenic | 40.0% | |
| AACAGGCTTGAATTGGGAAA+TGG | - | chr7.4:25949238-25949257 | None:intergenic | 40.0% | |
| AACCATATGTGTTGCAGTGT+CGG | + | chr7.4:25946616-25946635 | MS.gene52592:intron | 40.0% | |
| AAGAATTACTGCAAGCTCTG+TGG | + | chr7.4:25949819-25949838 | MS.gene52592:intron | 40.0% | |
| AAGTTCAAGATTGAAGCAGC+TGG | - | chr7.4:25947377-25947396 | None:intergenic | 40.0% | |
| AATCACAAATAAGGGCTGCA+AGG | - | chr7.4:25951619-25951638 | None:intergenic | 40.0% | |
| AGAATTACTGCAAGCTCTGT+GGG | + | chr7.4:25949820-25949839 | MS.gene52592:intron | 40.0% | |
| AGTTCAAGATTGAAGCAGCT+GGG | - | chr7.4:25947376-25947395 | None:intergenic | 40.0% | |
| ATCACAAATAAGGGCTGCAA+GGG | - | chr7.4:25951618-25951637 | None:intergenic | 40.0% | |
| ATCATATGCTATTATGCCCC+AGG | + | chr7.4:25946493-25946512 | MS.gene52592:CDS | 40.0% | |
| ATTTAGGTAGCTTGACAGGA+GGG | - | chr7.4:25948065-25948084 | None:intergenic | 40.0% | |
| CAGCAAAGAGAAAGAAAGAG+AGG | - | chr7.4:25948602-25948621 | None:intergenic | 40.0% | |
| CATCATTGGAAGAACCATCA+AGG | - | chr7.4:25947222-25947241 | None:intergenic | 40.0% | |
| CCTTTCCCAAAACAAGTCTA+GGG | + | chr7.4:25949686-25949705 | MS.gene52592:intron | 40.0% | |
| CTGAATGAGACACATAAAGG+AGG | + | chr7.4:25950781-25950800 | MS.gene52592:intron | 40.0% | |
| CTTACAGTATCAACGCTTAC+AGG | - | chr7.4:25951518-25951537 | None:intergenic | 40.0% | |
| CTTTCCCAAAACAAGTCTAG+GGG | + | chr7.4:25949687-25949706 | MS.gene52592:intron | 40.0% | |
| GAAGAAGATGGTTCAACTGA+AGG | - | chr7.4:25947286-25947305 | None:intergenic | 40.0% | |
| GAATACAACAATGCAGGTTG+AGG | - | chr7.4:25947964-25947983 | None:intergenic | 40.0% | |
| GATGATTTAGGTAGCTTGAC+AGG | - | chr7.4:25948069-25948088 | None:intergenic | 40.0% | |
| GCACTTTCCATTAAACGGAT+AGG | + | chr7.4:25948757-25948776 | MS.gene52592:intron | 40.0% | |
| GGAAGATCTACCTTCACAAA+CGG | - | chr7.4:25948156-25948175 | None:intergenic | 40.0% | |
| GGTTGTGAATACAACAATGC+AGG | - | chr7.4:25947970-25947989 | None:intergenic | 40.0% | |
| GTATGTCTCTTCTCTGTGTA+GGG | + | chr7.4:25946459-25946478 | MS.gene52592:intron | 40.0% | |
| GTATTCACAACCTTCGCAAA+CGG | + | chr7.4:25947978-25947997 | MS.gene52592:CDS | 40.0% | |
| GTGATACCTTGGTGAAAAAG+CGG | - | chr7.4:25946378-25946397 | None:intergenic | 40.0% | |
| TAGGCTTATACCAACTACTG+AGG | - | chr7.4:25950112-25950131 | None:intergenic | 40.0% | |
| TATACCAACTACTGAGGAGA+CGG | - | chr7.4:25950106-25950125 | None:intergenic | 40.0% | |
| TCAACTCAGCAAGTGATGTT+TGG | + | chr7.4:25949352-25949371 | MS.gene52592:intron | 40.0% | |
| TCACTCTAGTGCTCTTCAAA+TGG | - | chr7.4:25949652-25949671 | None:intergenic | 40.0% | |
| TCAGTTGAACCATCTTCTTC+AGG | + | chr7.4:25947286-25947305 | MS.gene52592:CDS | 40.0% | |
| TCATATGCTATTATGCCCCA+GGG | + | chr7.4:25946494-25946513 | MS.gene52592:CDS | 40.0% | |
| TGAGCTGCATAATGACTACT+AGG | + | chr7.4:25949301-25949320 | MS.gene52592:intron | 40.0% | |
| TGTATGTCTCTTCTCTGTGT+AGG | + | chr7.4:25946458-25946477 | MS.gene52592:intron | 40.0% | |
| TTACCAAGTCCAATAGTGCT+GGG | + | chr7.4:25950405-25950424 | MS.gene52592:intron | 40.0% | |
| TTGGGATCCTATCCGTTTAA+TGG | - | chr7.4:25948767-25948786 | None:intergenic | 40.0% | |
| ! | AACATCACTTGCTGAGTTGA+CGG | - | chr7.4:25949352-25949371 | None:intergenic | 40.0% |
| ! | AAGGCTTAGCTGTTGTTTGT+TGG | + | chr7.4:25950133-25950152 | MS.gene52592:intron | 40.0% |
| ! | ATGAGAAAAGCGTGCAGATT+TGG | - | chr7.4:25946308-25946327 | None:intergenic | 40.0% |
| ! | GGAAAGAGAAAGCATATAGG+TGG | + | chr7.4:25950802-25950821 | MS.gene52592:intron | 40.0% |
| ! | GGAGGAAAGAGAAAGCATAT+AGG | + | chr7.4:25950799-25950818 | MS.gene52592:intron | 40.0% |
| ! | TCTCTGCCTCACTTTAGTTT+CGG | - | chr7.4:25949451-25949470 | None:intergenic | 40.0% |
| ! | TTTCAGGTCTCTGAATCTGT+GGG | + | chr7.4:25949946-25949965 | MS.gene52592:intron | 40.0% |
| !! | ACATCTGATTTGGCTTTAGG+AGG | - | chr7.4:25947247-25947266 | None:intergenic | 40.0% |
| !! | CATGTTCGTAAGCTGTTTTC+AGG | + | chr7.4:25946767-25946786 | MS.gene52592:intron | 40.0% |
| !! | GAATGAAAGAAGAGGCATCA+AGG | + | chr7.4:25949392-25949411 | MS.gene52592:intron | 40.0% |
| !! | TTCACCCCTAGACTTGTTTT+GGG | - | chr7.4:25949694-25949713 | None:intergenic | 40.0% |
| !!! | ACTGTGGTTTTATTGTCGAG+GGG | - | chr7.4:25950686-25950705 | None:intergenic | 40.0% |
| ACTATGCAGGCTGATAAGTC+AGG | + | chr7.4:25951458-25951477 | MS.gene52592:intron | 45.0% | |
| AGATCTACCTTCACAAACGG+AGG | - | chr7.4:25948153-25948172 | None:intergenic | 45.0% | |
| AGATGGTTCAACTGAAGGTG+CGG | - | chr7.4:25947281-25947300 | None:intergenic | 45.0% | |
| ATACCAACTACTGAGGAGAC+GGG | - | chr7.4:25950105-25950124 | None:intergenic | 45.0% | |
| ATACCAGGAAAACCAGAGTG+TGG | - | chr7.4:25950037-25950056 | None:intergenic | 45.0% | |
| ATCTGTCGTGTTTCGTCCAT+AGG | - | chr7.4:25949065-25949084 | None:intergenic | 45.0% | |
| ATGTTGTTCTGCGGCATCTT+CGG | - | chr7.4:25949751-25949770 | None:intergenic | 45.0% | |
| ATTTAACTGGGCCTTAACCC+TGG | - | chr7.4:25946514-25946533 | None:intergenic | 45.0% | |
| CGGAGAGAGTTGTTGGAATT+AGG | - | chr7.4:25946358-25946377 | None:intergenic | 45.0% | |
| CGGTGGTTCAACATCTGATT+TGG | - | chr7.4:25947257-25947276 | None:intergenic | 45.0% | |
| CTATGCAGGCTGATAAGTCA+GGG | + | chr7.4:25951459-25951478 | MS.gene52592:intron | 45.0% | |
| CTTACCAAGTCCAATAGTGC+TGG | + | chr7.4:25950404-25950423 | MS.gene52592:intron | 45.0% | |
| GAAAAAGCGGAGAGAGTTGT+TGG | - | chr7.4:25946365-25946384 | None:intergenic | 45.0% | |
| GAAGCTGCAACAGTAACAGT+AGG | - | chr7.4:25946271-25946290 | None:intergenic | 45.0% | |
| GATTTAGGTAGCTTGACAGG+AGG | - | chr7.4:25948066-25948085 | None:intergenic | 45.0% | |
| GCACACATCACATGACTTTC+AGG | + | chr7.4:25949930-25949949 | MS.gene52592:intron | 45.0% | |
| GCCTTTCCCAAAACAAGTCT+AGG | + | chr7.4:25949685-25949704 | MS.gene52592:intron | 45.0% | |
| GGTTAAGGCCCAGTTAAATG+AGG | + | chr7.4:25946515-25946534 | MS.gene52592:CDS | 45.0% | |
| GTGGGAGACGAAGTAAAGAA+GGG | + | chr7.4:25948242-25948261 | MS.gene52592:CDS | 45.0% | |
| TACCGACACTGCAACACATA+TGG | - | chr7.4:25946621-25946640 | None:intergenic | 45.0% | |
| TGAACAAGTGCATCCTACAG+AGG | - | chr7.4:25948576-25948595 | None:intergenic | 45.0% | |
| TGAACCATCTTCTTCAGGCT+TGG | + | chr7.4:25947291-25947310 | MS.gene52592:CDS | 45.0% | |
| TGGAATTAGGAGAGAGACGA+GGG | - | chr7.4:25946345-25946364 | None:intergenic | 45.0% | |
| TGGGAGACGAAGTAAAGAAG+GGG | + | chr7.4:25948243-25948262 | MS.gene52592:CDS | 45.0% | |
| TTCAACAAGGTTGCCCTTGA+TGG | + | chr7.4:25947205-25947224 | MS.gene52592:intron | 45.0% | |
| TTGGAATTAGGAGAGAGACG+AGG | - | chr7.4:25946346-25946365 | None:intergenic | 45.0% | |
| TTTAACTGGGCCTTAACCCT+GGG | - | chr7.4:25946513-25946532 | None:intergenic | 45.0% | |
| TTTAGGTAGCTTGACAGGAG+GGG | - | chr7.4:25948064-25948083 | None:intergenic | 45.0% | |
| ! | AGAAAAGCGTGCAGATTTGG+TGG | - | chr7.4:25946305-25946324 | None:intergenic | 45.0% |
| ! | CTTTCAGGTCTCTGAATCTG+TGG | + | chr7.4:25949945-25949964 | MS.gene52592:intron | 45.0% |
| ! | GATGTGTGCTGCTCTAGTTA+AGG | - | chr7.4:25949919-25949938 | None:intergenic | 45.0% |
| ! | GTAGGCTCTGATGCCATATT+AGG | - | chr7.4:25950355-25950374 | None:intergenic | 45.0% |
| ! | TGAGGAGCATATTCTGGTTG+AGG | - | chr7.4:25947946-25947965 | None:intergenic | 45.0% |
| !! | AAGAGGCATCAAGGAGGTTA+AGG | + | chr7.4:25949401-25949420 | MS.gene52592:intron | 45.0% |
| !! | CTTCACCCCTAGACTTGTTT+TGG | - | chr7.4:25949695-25949714 | None:intergenic | 45.0% |
| !! | TGAAAGAAGAGGCATCAAGG+AGG | + | chr7.4:25949395-25949414 | MS.gene52592:intron | 45.0% |
| !! | TGTTTGTTGGTAGTCCTACC+TGG | + | chr7.4:25950146-25950165 | MS.gene52592:intron | 45.0% |
| !!! | CCCTAGACTTGTTTTGGGAA+AGG | - | chr7.4:25949689-25949708 | None:intergenic | 45.0% |
| !!! | TTACCACACTCTGGTTTTCC+TGG | + | chr7.4:25950031-25950050 | MS.gene52592:intron | 45.0% |
| !! | AAGAATAATATATAATTAAA+CGG | - | chr7.4:25948177-25948196 | None:intergenic | 5.0% |
| !!! | AAGTTTTTATATTATTTTTA+TGG | + | chr7.4:25948323-25948342 | MS.gene52592:intron | 5.0% |
| !!! | TTTTTATTTTTTTTTACTTT+TGG | - | chr7.4:25947441-25947460 | None:intergenic | 5.0% |
| AGAAGGTGAAGTGGAGGACA+AGG | - | chr7.4:25946242-25946261 | None:intergenic | 50.0% | |
| AGAGAGACGAGGGAAAGTGA+TGG | - | chr7.4:25946335-25946354 | None:intergenic | 50.0% | |
| AGAGGCGGACGTGATGATTT+AGG | - | chr7.4:25948081-25948100 | None:intergenic | 50.0% | |
| AGTGCATCCTACAGAGGAGT+AGG | - | chr7.4:25948570-25948589 | None:intergenic | 50.0% | |
| ATGCCCAGCACTATTGGACT+TGG | - | chr7.4:25950411-25950430 | None:intergenic | 50.0% | |
| ATTCAAACAGGACGCCTCTC+AGG | - | chr7.4:25946665-25946684 | None:intergenic | 50.0% | |
| ATTCTACCGAAGTCCTGCAC+CGG | + | chr7.4:25948122-25948141 | MS.gene52592:CDS | 50.0% | |
| CCAAGGAGAGCAAGATGTTC+TGG | - | chr7.4:25949787-25949806 | None:intergenic | 50.0% | |
| CCAGAACATCTTGCTCTCCT+TGG | + | chr7.4:25949784-25949803 | MS.gene52592:intron | 50.0% | |
| CGCAACAATGAAGAGGGTCA+AGG | - | chr7.4:25949509-25949528 | None:intergenic | 50.0% | |
| CTCTTAAAAGCCCCATGGCA+GGG | + | chr7.4:25948097-25948116 | MS.gene52592:CDS | 50.0% | |
| GAGGATTCCTACTCCTCTGT+AGG | + | chr7.4:25948560-25948579 | MS.gene52592:intron | 50.0% | |
| GCACCCTTCACCTTGAAATC+CGG | + | chr7.4:25950297-25950316 | MS.gene52592:intron | 50.0% | |
| GCTATTATGCCCCAGGGTTA+AGG | + | chr7.4:25946500-25946519 | MS.gene52592:CDS | 50.0% | |
| GGAAGAGCCAGAGTATGTGA+TGG | - | chr7.4:25948018-25948037 | None:intergenic | 50.0% | |
| GGTGGGAGACGAAGTAAAGA+AGG | + | chr7.4:25948241-25948260 | MS.gene52592:intron | 50.0% | |
| GTAACAGTAGGAGCAGCAGA+AGG | - | chr7.4:25946259-25946278 | None:intergenic | 50.0% | |
| TACCAACTACTGAGGAGACG+GGG | - | chr7.4:25950104-25950123 | None:intergenic | 50.0% | |
| TCCACCATGCTAAAACGCCA+CGG | + | chr7.4:25949122-25949141 | MS.gene52592:intron | 50.0% | |
| TCTGCCAAGCCTGAAGAAGA+TGG | - | chr7.4:25947298-25947317 | None:intergenic | 50.0% | |
| TGTGTCAGACATCACCTGAG+AGG | + | chr7.4:25946648-25946667 | MS.gene52592:intron | 50.0% | |
| TGTTGCGCCATCACATACTC+TGG | + | chr7.4:25948008-25948027 | MS.gene52592:CDS | 50.0% | |
| TTAACTGGGCCTTAACCCTG+GGG | - | chr7.4:25946512-25946531 | None:intergenic | 50.0% | |
| TTAGGTAGCTTGACAGGAGG+GGG | - | chr7.4:25948063-25948082 | None:intergenic | 50.0% | |
| TTCACAAACGGAGGTTCACC+CGG | - | chr7.4:25948144-25948163 | None:intergenic | 50.0% | |
| ! | AGAGTATGTGATGGCGCAAC+AGG | - | chr7.4:25948009-25948028 | None:intergenic | 50.0% |
| ! | CAATAGTGCTGGGCATGAGA+GGG | + | chr7.4:25950415-25950434 | MS.gene52592:intron | 50.0% |
| ! | GCAGGTTGAGGAGCATATTC+TGG | - | chr7.4:25947952-25947971 | None:intergenic | 50.0% |
| !! | GGCTTTAGGAGGCACATCAT+TGG | - | chr7.4:25947236-25947255 | None:intergenic | 50.0% |
| !!! | CTCTCTCCGCTTTTTCACCA+AGG | + | chr7.4:25946369-25946388 | MS.gene52592:CDS | 50.0% |
| AAACATGGCGTTGCGGCCTA+TGG | + | chr7.4:25949046-25949065 | MS.gene52592:intron | 55.0% | |
| AAACGATGGGTGGCCCGAAT+CGG | - | chr7.4:25950377-25950396 | None:intergenic | 55.0% | |
| AGCAGCAGAAGGTGAAGTGG+AGG | - | chr7.4:25946248-25946267 | None:intergenic | 55.0% | |
| AGGAGCAGCAGAAGGTGAAG+TGG | - | chr7.4:25946251-25946270 | None:intergenic | 55.0% | |
| AGGTGAAGTGGAGGACAAGG+AGG | - | chr7.4:25946239-25946258 | None:intergenic | 55.0% | |
| CCTCTCATGCCCAGCACTAT+TGG | - | chr7.4:25950417-25950436 | None:intergenic | 55.0% | |
| CCTCTTAAAAGCCCCATGGC+AGG | + | chr7.4:25948096-25948115 | MS.gene52592:CDS | 55.0% | |
| CGGTAGAATGTCCCTGCCAT+GGG | - | chr7.4:25948111-25948130 | None:intergenic | 55.0% | |
| GAGACGAGGGAAAGTGATGG+AGG | - | chr7.4:25946332-25946351 | None:intergenic | 55.0% | |
| GGGTGAACCTCCGTTTGTGA+AGG | + | chr7.4:25948143-25948162 | MS.gene52592:CDS | 55.0% | |
| GGTAGAATGTCCCTGCCATG+GGG | - | chr7.4:25948110-25948129 | None:intergenic | 55.0% | |
| TCCGCCTCTTAAAAGCCCCA+TGG | + | chr7.4:25948092-25948111 | MS.gene52592:CDS | 55.0% | |
| TCGGTAGAATGTCCCTGCCA+TGG | - | chr7.4:25948112-25948131 | None:intergenic | 55.0% | |
| TTCTACCGAAGTCCTGCACC+GGG | + | chr7.4:25948123-25948142 | MS.gene52592:CDS | 55.0% | |
| TTCTGCGGCATCTTCGGTTG+AGG | - | chr7.4:25949745-25949764 | None:intergenic | 55.0% | |
| TTGACAGGAGGGGGAGAAGT+TGG | - | chr7.4:25948054-25948073 | None:intergenic | 55.0% | |
| ! | CCAATAGTGCTGGGCATGAG+AGG | + | chr7.4:25950414-25950433 | MS.gene52592:intron | 55.0% |
| ! | CCTGCCATGGGGCTTTTAAG+AGG | - | chr7.4:25948099-25948118 | None:intergenic | 55.0% |
| ! | CTGGGCATGAGAGGGTGTAT+TGG | + | chr7.4:25950423-25950442 | MS.gene52592:intron | 55.0% |
| ! | GAAGTTGGCGTTGAAGGAGC+AGG | - | chr7.4:25948039-25948058 | None:intergenic | 55.0% |
| ! | GGCATCAGAGCCTACCGATT+CGG | + | chr7.4:25950360-25950379 | MS.gene52592:intron | 55.0% |
| ! | GGTTCAACTGAAGGTGCGGT+CGG | - | chr7.4:25947277-25947296 | None:intergenic | 55.0% |
| ! | GTATGTGATGGCGCAACAGG+TGG | - | chr7.4:25948006-25948025 | None:intergenic | 55.0% |
| !! | GCATCAGAGCCTACCGATTC+GGG | + | chr7.4:25950361-25950380 | MS.gene52592:intron | 55.0% |
| !! | GCCATGGGGCTTTTAAGAGG+CGG | - | chr7.4:25948096-25948115 | None:intergenic | 55.0% |
| !! | TCTGCCGTGGCGTTTTAGCA+TGG | - | chr7.4:25949129-25949148 | None:intergenic | 55.0% |
| GACCCCGTCTCCTCAGTAGT+TGG | + | chr7.4:25950099-25950118 | MS.gene52592:intron | 60.0% | |
| GTTCACCCGGTGCAGGACTT+CGG | - | chr7.4:25948131-25948150 | None:intergenic | 60.0% | |
| TGCGGCATCTTCGGTTGAGG+TGG | - | chr7.4:25949742-25949761 | None:intergenic | 60.0% | |
| ! | GGGGGAGAAGTTGGCGTTGA+AGG | - | chr7.4:25948045-25948064 | None:intergenic | 60.0% |
| ! | TCAACTGAAGGTGCGGTCGG+TGG | - | chr7.4:25947274-25947293 | None:intergenic | 60.0% |
| !! | GCCGTGGCGTTTTAGCATGG+TGG | - | chr7.4:25949126-25949145 | None:intergenic | 60.0% |
| AACGGAGGTTCACCCGGTGC+AGG | - | chr7.4:25948138-25948157 | None:intergenic | 65.0% | |
| ACAGGTGGCGCCGTTTGCGA+AGG | - | chr7.4:25947991-25948010 | None:intergenic | 65.0% | |
| GATGGGTGGCCCGAATCGGT+AGG | - | chr7.4:25950373-25950392 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 25946229 | 25951644 | 25946229 | ID=MS.gene52592 |
| chr7.4 | mRNA | 25946229 | 25951644 | 25946229 | ID=MS.gene52592.t1;Parent=MS.gene52592 |
| chr7.4 | exon | 25946229 | 25946390 | 25946229 | ID=MS.gene52592.t1.exon1;Parent=MS.gene52592.t1 |
| chr7.4 | CDS | 25946229 | 25946390 | 25946229 | ID=cds.MS.gene52592.t1;Parent=MS.gene52592.t1 |
| chr7.4 | exon | 25946480 | 25946536 | 25946480 | ID=MS.gene52592.t1.exon2;Parent=MS.gene52592.t1 |
| chr7.4 | CDS | 25946480 | 25946536 | 25946480 | ID=cds.MS.gene52592.t1;Parent=MS.gene52592.t1 |
| chr7.4 | exon | 25947214 | 25947365 | 25947214 | ID=MS.gene52592.t1.exon3;Parent=MS.gene52592.t1 |
| chr7.4 | CDS | 25947214 | 25947365 | 25947214 | ID=cds.MS.gene52592.t1;Parent=MS.gene52592.t1 |
| chr7.4 | exon | 25947861 | 25948164 | 25947861 | ID=MS.gene52592.t1.exon4;Parent=MS.gene52592.t1 |
| chr7.4 | CDS | 25947861 | 25948164 | 25947861 | ID=cds.MS.gene52592.t1;Parent=MS.gene52592.t1 |
| chr7.4 | exon | 25948242 | 25948313 | 25948242 | ID=MS.gene52592.t1.exon5;Parent=MS.gene52592.t1 |
| chr7.4 | CDS | 25948242 | 25948313 | 25948242 | ID=cds.MS.gene52592.t1;Parent=MS.gene52592.t1 |
| chr7.4 | exon | 25951467 | 25951532 | 25951467 | ID=MS.gene52592.t1.exon6;Parent=MS.gene52592.t1 |
| chr7.4 | CDS | 25951467 | 25951532 | 25951467 | ID=cds.MS.gene52592.t1;Parent=MS.gene52592.t1 |
| chr7.4 | exon | 25951624 | 25951644 | 25951624 | ID=MS.gene52592.t1.exon7;Parent=MS.gene52592.t1 |
| chr7.4 | CDS | 25951624 | 25951644 | 25951624 | ID=cds.MS.gene52592.t1;Parent=MS.gene52592.t1 |
| Gene Sequence |
| Protein sequence |
